Q9Y5H6
Gene name |
PCDHA8 |
Protein name |
Protocadherin alpha-8 |
Names |
PCDH-alpha-8 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:56140 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9Y5H6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9Y5H6-F1 | Predicted | AlphaFoldDB |
1043 variants for Q9Y5H6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000508600 CA3454461 rs150254638 |
807 | R>H | Hirschsprung disease, susceptibility to, 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs782810711 CA3449395 |
2 | D>G | No |
ClinGen ExAC TOPMed |
|
|
CA3449394 rs111298048 |
2 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449397 rs781808713 |
3 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 3 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554138104 CA361260114 |
4 | H>L | No |
ClinGen gnomAD |
|
|
rs1353255921 CA361260107 |
4 | H>Y | No |
ClinGen TOPMed |
|
|
rs376396414 CA3449398 |
5 | W>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1424910645 CA361260139 |
6 | R>* | No |
ClinGen TOPMed |
|
|
rs782262477 CA3449400 |
6 | R>P | No |
ClinGen ExAC gnomAD |
|
|
COSM3826970 rs782262477 COSM3826969 CA3449399 |
6 | R>Q | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs782681292 CA3449401 |
7 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260162 rs1554138115 |
8 | E>* | No |
ClinGen gnomAD |
|
|
CA361260164 rs1554138118 |
8 | E>A | No |
ClinGen gnomAD |
|
|
CA361260179 rs17844312 |
8 | E>D | No |
ClinGen Ensembl |
|
|
CA3449402 rs3756333 |
10 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260228 rs1554138130 |
12 | W>* | No |
ClinGen gnomAD |
|
|
rs782317830 CA3449404 |
13 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449405 rs782217721 |
13 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA361260237 COSM1754043 COSM1754044 rs782217721 |
13 | R>Q | Variant assessed as Somatic; impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1238477201 CA361260265 |
15 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA3449406 rs782348883 |
16 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA361260299 rs1176105427 |
18 | L>I | No |
ClinGen TOPMed |
|
|
rs782006214 CA3449407 |
19 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449408 rs577075342 |
20 | L>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554138141 CA361260321 |
21 | L>P | No |
ClinGen gnomAD |
|
|
CA361260376 rs1554138145 |
25 | K>E | No |
ClinGen gnomAD |
|
|
rs782817085 CA361260441 CA3449409 |
28 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449411 COSM1433903 COSM1433902 rs782072047 |
29 | G>D | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361260446 rs1562387216 |
29 | G>R | No |
ClinGen Ensembl |
|
|
CA361260475 rs1554138162 |
31 | L>F | No |
ClinGen gnomAD |
|
|
CA361260492 CA361260494 rs1242106171 |
32 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs781840128 CA3449413 |
32 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs782775436 CA3449415 |
35 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA3449418 rs782581098 |
36 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449419 rs782581098 |
36 | P>L | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361260576 rs782581098 |
36 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449417 rs782532787 |
36 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782585301 CA3449421 |
38 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs3756332 CA361260649 |
39 | A>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449423 rs3756332 |
39 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782688329 CA3449424 |
40 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554138191 CA361260679 |
41 | H>P | No |
ClinGen gnomAD |
|
|
rs782285371 CA3449425 |
41 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554138191 CA361260682 |
41 | H>R | No |
ClinGen gnomAD |
|
|
rs1554138190 CA361260676 |
41 | H>Y | No |
ClinGen gnomAD |
|
|
rs782332058 CA3449426 |
43 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782097039 CA3449428 |
44 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA361260782 rs1554138202 |
46 | G>C | No |
ClinGen gnomAD |
|
|
CA3449429 rs782342927 |
46 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449431 rs782159646 |
48 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA3449432 rs562900530 |
49 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 50 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1490156896 CA361260889 |
51 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs533142995 CA3449435 |
53 | G>E | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs533142995 CA128361836 |
53 | G>V | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs559730061 CA3449434 |
53 | G>W | No |
ClinGen ExAC gnomAD |
|
|
rs1259932956 CA361260946 |
54 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs62384463 CA3449438 |
55 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 55 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3449439 rs373294357 |
56 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376388555 CA3449440 |
57 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781906401 CA3449441 |
58 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA361261061 rs376513525 |
61 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM3776269 CA3449442 COSM3776268 rs376513525 |
61 | P>Q | urinary_tract [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
| TCGA novel | 61 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1345417681 CA361261084 |
62 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1345417681 CA361261083 |
62 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs62624460 CA3449444 |
64 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554138269 CA361261108 |
64 | F>L | No |
ClinGen gnomAD |
|
|
CA361261157 rs1554138273 |
65 | R>L | No |
ClinGen gnomAD |
|
|
rs1554138273 CA361261155 |
65 | R>Q | No |
ClinGen gnomAD |
|
|
CA361261151 rs1562388571 |
65 | R>W | No |
ClinGen Ensembl |
|
|
rs782600822 CA361261172 CA3449447 |
66 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782600822 CA361261164 |
66 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361261190 rs1554138282 |
67 | A>E | No |
ClinGen gnomAD |
|
|
CA361261192 rs1554138282 |
67 | A>V | No |
ClinGen gnomAD |
|
|
rs1580966661 CA361261229 TCGA novel |
68 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
|
rs1379047518 CA361261233 |
69 | K>E | No |
ClinGen TOPMed |
|
|
rs1554138289 CA361261250 |
70 | R>G | No |
ClinGen gnomAD |
|
|
CA361261257 rs1554138299 |
70 | R>S | No |
ClinGen gnomAD |
|
|
CA3449451 rs782058552 |
71 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782015058 CA3449450 |
71 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs782015058 CA361261265 |
71 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3449452 rs146057065 |
72 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782773701 CA3449455 |
72 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3449454 rs146057065 |
72 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 73 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361261284 rs1488596274 |
73 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA361261276 rs1488596274 |
73 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1203215461 CA361261293 |
74 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1554138308 CA361261305 |
75 | L>P | No |
ClinGen gnomAD |
|
|
CA361261321 rs781866504 |
76 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361261315 rs1554138310 |
76 | E>V | No |
ClinGen gnomAD |
|
|
rs3756331 CA3449457 VAR_021876 |
78 | S>N | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1554138313 CA361261343 |
79 | L>M | No |
ClinGen gnomAD |
|
|
rs1554138314 CA361261345 |
79 | L>Q | No |
ClinGen gnomAD |
|
|
CA3449458 rs782792697 |
80 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
COSM1062150 COSM1062151 rs1554138321 CA361261381 |
82 | G>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA3449460 COSM1062153 COSM1062152 rs782436885 |
82 | G>D | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1281486656 CA361261390 |
83 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA361261405 rs1562389584 |
84 | L>S | No |
ClinGen Ensembl |
|
|
rs1220947138 CA361261422 |
85 | F>S | No |
ClinGen TOPMed |
|
|
CA361261455 rs1327577851 |
89 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs782521144 CA3449463 |
91 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449465 rs566154248 |
92 | R>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3449464 rs566154248 |
92 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782464159 CA3449466 |
92 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs566154248 CA361261484 |
92 | R>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs782222957 CA3449468 |
93 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs782222957 CA3449469 |
93 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs781994028 CA3449470 |
94 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361261524 rs1554138334 |
96 | C>S | No |
ClinGen gnomAD |
|
|
rs555005640 CA3449472 |
96 | C>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA3449474 rs782066837 |
97 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782066837 CA3449475 |
97 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361261536 rs199713478 CA3449473 |
97 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs144868773 CA3449476 |
98 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1580970539 CA361261543 COSM1062155 COSM1062154 |
98 | R>W | endometrium [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs782086389 CA3449477 |
99 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361261552 rs1554138356 |
99 | S>N | No |
ClinGen gnomAD |
|
|
rs782778902 CA3449478 |
99 | S>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361261559 rs1580970968 |
100 | A>T | No |
ClinGen Ensembl |
|
|
rs1425270500 CA361261582 |
102 | C>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA3449480 rs782535381 |
104 | I>S | No |
ClinGen ExAC gnomAD |
|
|
CA361261605 rs1256595237 |
104 | I>V | No |
ClinGen TOPMed |
|
|
rs782711759 CA3449481 |
106 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA3449482 rs781786941 |
107 | E>V | No |
ClinGen ExAC TOPMed |
|
|
rs1461054795 CA361261651 |
108 | V>A | No |
ClinGen TOPMed |
|
|
CA361261657 rs1580971695 |
109 | I>N | No |
ClinGen Ensembl |
|
|
CA3449484 rs558861388 |
110 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs558861388 CA3449483 |
110 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1270188852 CA361261682 |
111 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1554138399 CA361261687 |
112 | R>K | No |
ClinGen gnomAD |
|
|
CA3449486 rs146047089 |
113 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449487 rs146047089 |
113 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449489 rs782331305 |
115 | Q>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 116 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782229170 CA3449491 |
119 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554138418 CA361261773 |
120 | D>N | No |
ClinGen gnomAD |
|
|
rs782342360 CA3449492 CA3449493 |
121 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782342360 CA3449494 |
121 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449495 rs782793191 |
122 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1332759626 CA361261797 |
122 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1580973511 CA361261817 |
123 | V>G | No |
ClinGen Ensembl |
|
|
CA361261842 rs1580973595 |
125 | D>V | No |
ClinGen Ensembl |
|
|
rs138900310 CA128362082 |
126 | V>A | No |
ClinGen ESP |
|
|
CA361261878 rs1554138466 |
127 | N>K | No |
ClinGen gnomAD |
|
|
CA361261901 rs1166014114 |
129 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3449497 rs782047941 |
129 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA361261919 rs574481490 |
130 | P>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3449498 rs574481490 |
130 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1444200684 CA361261925 |
131 | P>S | No |
ClinGen TOPMed |
|
|
rs1554138489 CA361261946 |
132 | V>G | No |
ClinGen gnomAD |
|
| TCGA novel | 134 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782523657 CA3449500 |
134 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3449499 rs781816417 |
134 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA361261978 rs1554138496 |
135 | V>L | No |
ClinGen gnomAD |
|
|
CA361261988 rs1554138499 |
136 | K>E | No |
ClinGen gnomAD |
|
|
CA361262004 rs1580975100 |
136 | K>N | No |
ClinGen Ensembl |
|
|
rs1554138500 CA361262020 |
137 | D>E | No |
ClinGen gnomAD |
|
|
rs541522208 CA3449502 |
140 | L>M | No |
ClinGen 1000Genomes |
|
| TCGA novel | 141 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554138511 CA361262059 |
141 | F>V | No |
ClinGen gnomAD |
|
|
rs1554138513 CA361262065 |
141 | F>Y | No |
ClinGen gnomAD |
|
|
CA361262086 rs1562391326 |
142 | V>G | No |
ClinGen Ensembl |
|
|
CA128362089 rs142035337 |
143 | S>A | No |
ClinGen ESP gnomAD |
|
|
CA3449504 rs781897436 |
145 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs144800443 CA3449505 |
146 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361262200 rs148555729 |
150 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3449507 rs148555729 |
150 | S>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1359107093 CA361262204 |
151 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1292935559 CA361262211 |
151 | R>P | No |
ClinGen TOPMed |
|
|
CA361262220 rs1554138532 |
152 | F>C | No |
ClinGen gnomAD |
|
|
CA361262222 rs1554138532 |
152 | F>S | No |
ClinGen gnomAD |
|
|
rs782259152 CA361262287 |
157 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA3449510 rs782259152 |
157 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3449513 rs782199697 |
160 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs782309593 CA3449514 |
160 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1311079057 CA361262345 |
161 | D>A | No |
ClinGen TOPMed |
|
|
rs1442483448 CA361262358 |
162 | V>L | No |
ClinGen TOPMed |
|
|
rs781969786 CA3449516 |
163 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449518 rs782381273 |
164 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781978794 CA3449519 |
165 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449520 rs142905144 |
166 | S>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782813381 CA3449521 |
166 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs150698374 CA3449524 |
169 | T>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782532388 CA3449526 |
170 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs1232327422 CA361262480 |
170 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1470654104 CA361262472 |
170 | Y>H | No |
ClinGen TOPMed |
|
|
rs781905507 CA3449528 |
171 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs1453803660 CA361262529 |
173 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs782446147 CA3449531 |
175 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1554138589 CA361262606 |
177 | Y>C | No |
ClinGen gnomAD |
|
|
CA3449532 rs782229457 |
178 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449533 rs182904804 |
179 | M>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361262645 rs182904804 |
179 | M>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3449534 rs782644730 |
180 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs145069696 CA3449535 |
181 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361262670 rs1288637378 |
181 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA361262699 rs1223944877 |
183 | N>S | No |
ClinGen TOPMed |
|
|
CA3449536 rs147561890 |
184 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361262736 rs1554138614 |
186 | N>D | No |
ClinGen gnomAD |
|
| TCGA novel | 187 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782072570 CA3449538 |
187 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA3449541 rs781972042 |
188 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781860003 CA3449543 |
189 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs114640080 CA361262795 |
189 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449542 rs114640080 |
189 | N>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361262822 rs1554138627 |
191 | L>M | No |
ClinGen gnomAD |
|
|
rs782726371 CA3449545 |
192 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782726371 CA3449546 |
192 | V>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1362176056 CA361262852 |
193 | E>G | No |
ClinGen TOPMed |
|
|
CA361262873 rs782493316 |
195 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449547 rs782493316 |
195 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782726028 CA3449548 |
197 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361262927 rs1554138648 |
199 | S>T | No |
ClinGen gnomAD |
|
|
rs1490008187 CA361262978 |
202 | R>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1490008187 CA361262976 |
202 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
rs782674385 CA361263016 CA3449551 |
204 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361263008 rs1554138650 |
204 | D>Y | No |
ClinGen gnomAD |
|
|
CA361263022 rs1281777181 |
205 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3449553 rs782454808 |
207 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA3449552 rs782268321 |
207 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782454808 CA361263054 |
207 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1554138662 CA361263071 |
208 | H>Q | No |
ClinGen gnomAD |
|
|
rs1554138658 CA361263066 |
208 | H>R | No |
ClinGen gnomAD |
|
|
rs374278607 CA3449556 |
209 | H>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782003973 CA3449557 |
209 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA3449555 rs374278607 |
209 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361263096 rs1580983640 |
210 | L>S | No |
ClinGen Ensembl |
|
|
rs782251425 CA3449558 |
210 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA361263116 rs1282125752 |
211 | F>L | No |
ClinGen TOPMed |
|
|
rs1323540473 CA361263103 |
211 | F>L | No |
ClinGen TOPMed |
|
|
CA361263142 rs1221561116 |
214 | A>T | No |
ClinGen TOPMed |
|
|
rs1342346203 CA361263151 |
214 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA361263155 rs1554138669 |
215 | T>A | No |
ClinGen gnomAD |
|
|
CA361263164 rs1554138671 |
215 | T>I | No |
ClinGen gnomAD |
|
|
CA361263172 rs1270523059 |
216 | D>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs782421173 CA3449559 |
217 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA3449560 rs782019986 |
218 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368184778 CA3449561 |
219 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1316425759 CA361263228 |
220 | P>T | No |
ClinGen TOPMed |
|
|
rs781951350 CA3449563 |
221 | E>D | No |
ClinGen ExAC TOPMed |
|
|
CA3449562 rs782737634 |
221 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361263264 rs1554138683 |
222 | L>P | No |
ClinGen gnomAD |
|
|
CA3449564 rs782125762 |
224 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs782756553 CA3449565 |
226 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA361263309 rs1187456562 |
226 | V>L | No |
ClinGen TOPMed |
|
|
rs1475257095 CA361263324 |
227 | Q>R | No |
ClinGen TOPMed |
|
|
rs1554138709 CA361263336 |
228 | L>R | No |
ClinGen gnomAD |
|
|
rs781900361 CA3449566 |
229 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA3449567 rs782530916 |
231 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA361263382 rs1554138716 |
232 | V>A | No |
ClinGen gnomAD |
|
|
CA361263393 rs1554138721 |
233 | L>P | No |
ClinGen gnomAD |
|
|
rs781798239 CA3449569 |
234 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs782504959 CA3449570 |
235 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1554138731 CA361263458 |
237 | D>V | No |
ClinGen gnomAD |
|
|
rs371732180 CA3449572 |
240 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554138750 CA361263502 |
241 | T>A | No |
ClinGen gnomAD |
|
|
rs1554138752 CA361263519 |
242 | F>S | No |
ClinGen gnomAD |
|
|
rs536759978 CA3449575 COSM276643 COSM276642 |
243 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449574 rs536759978 |
243 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782280911 CA3449577 |
244 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs782280911 CA3449576 |
244 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA361263563 rs1461509081 |
245 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
CA361263576 rs1201275752 |
246 | E>Q | No |
ClinGen TOPMed |
|
|
CA3449579 rs782205390 |
247 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1319911388 COSM1062159 COSM1062158 CA361263594 |
247 | Y>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA3449582 rs782157352 |
248 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs200994582 CA3449581 |
248 | E>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1213934072 CA361263608 |
248 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA361263636 rs1554138767 |
249 | V>A | No |
ClinGen gnomAD |
|
|
rs201558482 CA128362243 |
249 | V>L | No |
ClinGen Ensembl |
|
|
rs781931179 CA3449584 |
251 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1454758813 CA361263680 |
252 | F>C | No |
ClinGen TOPMed |
|
|
CA361263670 rs1285752130 |
252 | F>L | No |
ClinGen TOPMed |
|
|
rs1554138777 CA361263741 |
255 | A>V | No |
ClinGen gnomAD |
|
|
CA3449586 rs558925442 |
257 | N>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA128362273 rs17844316 |
258 | G>A | No |
ClinGen gnomAD |
|
|
rs17844316 CA128362272 |
258 | G>E | No |
ClinGen gnomAD |
|
|
rs145495287 CA361263777 CA3449587 |
258 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361263800 rs1554138785 |
260 | T>A | No |
ClinGen gnomAD |
|
|
rs782779216 CA3449589 |
262 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3449591 rs525941 |
263 | K>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs525941 CA3449592 |
263 | K>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1171652738 CA361263846 |
264 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA3449594 rs371559299 |
268 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs534570289 CA3449596 |
269 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs525886 CA3449597 |
269 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449599 rs525886 COSM345701 COSM345702 |
269 | P>Q | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs525886 CA3449598 VAR_048529 |
269 | P>R | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
|
rs534570289 CA361263913 |
269 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3449595 rs534570289 |
269 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3449602 rs781977788 |
270 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361263931 rs1554138804 |
270 | D>E | No |
ClinGen gnomAD |
|
|
rs781977788 CA3449601 |
270 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1181203703 CA361263925 |
270 | D>N | No |
ClinGen TOPMed |
|
|
CA3449605 rs782161799 |
274 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781806924 CA3449607 |
275 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA3449606 rs574512736 |
275 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs781806924 CA361264013 |
275 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs782098467 CA361264022 |
276 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 276 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782098467 CA3449608 |
276 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 278 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3449609 rs782727077 |
279 | Y>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361264066 rs1554138834 |
280 | S>T | No |
ClinGen gnomAD |
|
|
CA361264104 rs1246524333 |
281 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3449610 rs781874615 |
283 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554138837 CA361264137 |
283 | S>N | No |
ClinGen gnomAD |
|
| TCGA novel | 284 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782502150 CA3449611 |
285 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs201890234 CA3449613 |
286 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs386692891 CA917595098 |
286 | E>AA | No |
ClinGen Ensembl |
|
|
CA3449614 rs199588480 |
287 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782237984 CA3449616 |
288 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA361264216 rs1554138845 |
288 | M>V | No |
ClinGen gnomAD |
|
|
rs377297294 CA3449617 |
289 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554138851 CA361264308 |
290 | I>T | No |
ClinGen gnomAD |
|
|
rs369894475 CA3449618 |
291 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1165859216 CA361264372 |
292 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA361264432 rs1554138867 |
294 | S>G | No |
ClinGen gnomAD |
|
|
CA3449619 rs782256061 |
295 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs782018862 CA3449621 |
295 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs372922883 CA3449620 |
295 | I>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782194934 CA3449622 |
297 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782194934 CA361264492 |
297 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 297 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM276645 CA3449623 rs141101675 COSM276644 |
297 | R>Q | Variant assessed as Somatic; 0.0003695 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449624 rs781946891 |
298 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA3449625 rs145025203 |
299 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA3449626 rs782763503 |
301 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3449627 rs556617535 |
302 | I>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361264747 rs201880118 |
305 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449629 rs201880118 |
305 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449628 rs782143913 |
305 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1271034090 CA361264756 |
306 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA361264773 rs1554138909 |
306 | G>D | No |
ClinGen gnomAD |
|
|
rs1271034090 CA361264758 |
306 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs781786250 CA3449630 |
307 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs1358378131 CA361264801 |
307 | N>K | No |
ClinGen TOPMed |
|
|
CA361264849 rs1289361551 |
309 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA361264919 rs1580994961 |
311 | E>G | No |
ClinGen Ensembl |
|
|
CA3449633 rs782750708 |
312 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA3449634 rs781876025 |
314 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 315 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554138931 CA361265085 |
316 | Y>C | No |
ClinGen TOPMed |
|
|
CA3449636 rs782512754 |
316 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 316 | Y>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361265200 rs1554138934 |
320 | I>N | No |
ClinGen gnomAD |
|
|
CA361265195 rs1554138934 |
320 | I>T | No |
ClinGen gnomAD |
|
|
CA361265205 rs1554138935 |
321 | D>N | No |
ClinGen gnomAD |
|
|
rs1554138940 CA361265228 |
322 | A>V | No |
ClinGen gnomAD |
|
|
CA3449637 rs574930135 |
324 | D>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1554138949 CA361265311 |
325 | K>I | No |
ClinGen gnomAD |
|
|
CA361265338 rs1554138952 |
327 | H>Q | No |
ClinGen gnomAD |
|
|
rs782281394 CA3449638 |
327 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA361265345 rs1554138957 |
328 | P>S | No |
ClinGen gnomAD |
|
|
rs1554138959 CA361265414 |
330 | M>T | No |
ClinGen gnomAD |
|
| TCGA novel | 331 | A>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3449639 rs782469106 |
331 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA361265543 rs782381367 |
334 | C>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361265537 rs1349163820 |
334 | C>S | No |
ClinGen TOPMed |
|
|
rs781982704 CA3449643 |
335 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA3449644 rs782294997 |
337 | L>* | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 337 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361265692 rs1554138968 |
340 | I>V | No |
ClinGen gnomAD |
|
|
rs565282599 CA3449648 |
345 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3449647 rs782041548 |
345 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361265853 rs1416730508 |
347 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782133559 CA3449650 |
348 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782761964 CA3449651 |
350 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA361265961 rs1554138976 |
351 | A>V | No |
ClinGen gnomAD |
|
|
rs1554138978 CA361265993 |
354 | S>T | No |
ClinGen gnomAD |
|
|
CA3449652 rs781911147 |
356 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA361266027 rs781911147 |
356 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA361266028 rs781911147 |
356 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs782539177 CA3449653 |
357 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA3449654 rs782714668 |
358 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3722962 COSM3722963 rs781796924 CA3449655 |
360 | R>C | upper_aerodigestive_tract Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361266089 rs1490172399 |
361 | E>Q | No |
ClinGen TOPMed |
|
|
CA361266140 rs1266480987 |
363 | A>T | No |
ClinGen TOPMed |
|
|
CA361266161 rs1554138996 |
364 | Q>K | No |
ClinGen gnomAD |
|
|
CA3449656 rs782482546 |
366 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449657 rs142074942 |
367 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361268012 rs142074942 |
367 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782238105 CA3449658 |
368 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs1554139013 CA361268020 |
368 | V>L | No |
ClinGen gnomAD |
|
|
CA3449659 rs150855027 |
369 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782191799 CA3449661 |
370 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA3449660 rs782667421 COSM267121 COSM267120 |
370 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA128362488 rs782415730 |
372 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1554139039 CA361268144 |
374 | V>L | No |
ClinGen gnomAD |
|
|
rs541321824 CA3449665 |
375 | N>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA128362491 rs200777298 |
376 | D>H | No |
ClinGen gnomAD |
|
|
CA361268172 rs200777298 |
376 | D>Y | No |
ClinGen gnomAD |
|
|
CA361268199 rs1224614078 |
377 | L>R | No |
ClinGen TOPMed |
|
|
CA361268269 rs1299635364 |
379 | S>* | No |
ClinGen TOPMed |
|
| TCGA novel | 379 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361268279 rs1554139050 |
380 | G>R | No |
ClinGen gnomAD |
|
|
CA361268304 rs1554139058 |
381 | A>V | No |
ClinGen gnomAD |
|
|
rs1554139064 CA361268322 |
382 | N>K | No |
ClinGen gnomAD |
|
|
rs1451214851 CA361268317 |
382 | N>S | No |
ClinGen TOPMed |
|
|
rs781940695 CA3449671 |
383 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361268361 rs781940695 |
383 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 385 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs449407 CA361268485 |
386 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs449407 CA3449674 |
386 | T>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554139090 CA361268498 |
387 | C>F | No |
ClinGen gnomAD |
|
|
CA361268491 rs1554139085 |
387 | C>R | No |
ClinGen gnomAD |
|
|
CA361268516 rs1554139092 |
388 | S>F | No |
ClinGen gnomAD |
|
|
CA3449675 rs782109145 |
390 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361268610 rs1554139100 |
391 | P>R | No |
ClinGen gnomAD |
|
|
CA3449679 rs782560800 |
394 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1554139112 CA361268739 |
395 | F>L | No |
ClinGen gnomAD |
|
|
CA3449681 rs782464665 |
396 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA3449683 rs782246560 |
399 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs530202531 CA128362525 |
399 | S>P | No |
ClinGen 1000Genomes |
|
|
rs1554139135 CA361268952 |
400 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs201459051 CA361268973 |
401 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449685 rs201459051 |
401 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782314356 CA3449687 |
402 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA361269027 rs1323450768 |
403 | N>T | No |
ClinGen TOPMed |
|
|
rs141068049 CA3449689 |
405 | Y>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554139153 CA361269124 |
406 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361269153 rs1554139159 |
408 | V>G | No |
ClinGen gnomAD |
|
|
rs1384606172 CA361269169 |
409 | L>P | No |
ClinGen TOPMed |
|
|
CA361269186 rs1554139165 |
410 | D>H | No |
ClinGen gnomAD |
|
|
CA361269197 rs1554139165 |
410 | D>N | No |
ClinGen gnomAD |
|
|
CA361269192 rs1554139165 |
410 | D>Y | No |
ClinGen gnomAD |
|
|
rs144906391 CA3449705 |
411 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3449693 rs782657248 |
411 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs144906391 CA3449704 |
411 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3449711 rs376028436 |
412 | A>D | No |
ClinGen ExAC |
|
|
CA3449710 rs200439538 |
412 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200439538 COSM4159483 CA3449709 COSM4159482 |
412 | A>T | thyroid [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs376028436 CA3449712 |
412 | A>V | No |
ClinGen ExAC |
|
|
CA361269396 rs782508180 |
414 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA3449715 rs782689533 |
414 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs782508180 CA3449714 |
414 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs781893579 CA3449717 |
415 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449716 rs781893579 |
415 | R>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449718 rs782579982 |
415 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs781893579 CA361269433 |
415 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782476157 CA3449720 |
417 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs1554139191 CA361269507 |
417 | R>I | No |
ClinGen gnomAD |
|
|
CA361269512 rs1554139191 |
417 | R>K | No |
ClinGen gnomAD |
|
|
CA3449721 CA3449722 rs3733705 |
417 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361269520 rs1190804367 |
418 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs781932871 CA361269563 |
419 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs781932871 CA3449724 |
419 | S>W | No |
ClinGen ExAC gnomAD |
|
|
rs782348017 CA3449726 |
421 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 422 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3449727 rs781949214 |
423 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1554139208 CA361269756 |
426 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 427 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1254196927 CA361269790 |
428 | R>Q | No |
ClinGen TOPMed |
|
|
rs782158043 CA3449731 |
430 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA361269881 CA3449730 rs534936483 |
430 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3449729 rs534936483 |
430 | G>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782736515 CA3449732 COSM1242631 COSM1242630 |
431 | G>D | Variant assessed as Somatic; 0.0 impact. oesophagus [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
| TCGA novel | 431 | G>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361269954 rs1451476546 |
432 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs552964281 CA3449734 |
433 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3449735 rs782725221 |
434 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1338138369 CA361270050 |
436 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361270123 rs1554139230 |
438 | T>N | No |
ClinGen gnomAD |
|
|
rs1581008952 CA361270102 |
438 | T>P | No |
ClinGen Ensembl |
|
|
rs1554139232 CA361270156 |
439 | A>V | No |
ClinGen gnomAD |
|
|
CA361270207 rs1391862843 |
441 | L>S | No |
ClinGen TOPMed |
|
|
rs1554139236 CA361270204 |
441 | L>V | No |
ClinGen gnomAD |
|
|
rs781874111 CA3449736 |
442 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs568274799 CA3449737 |
443 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3449738 rs782663797 |
444 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449739 rs782197667 |
445 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs782617650 CA3449741 |
446 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs535256595 CA3449740 |
446 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361270351 rs1554139255 |
447 | D>E | No |
ClinGen gnomAD |
|
|
COSM1062171 CA361270315 rs1164400024 COSM1062170 |
447 | D>N | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs782389861 CA3449743 |
448 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449745 rs200360846 |
449 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361270414 rs1554139258 |
450 | D>H | No |
ClinGen gnomAD |
|
|
CA361270436 rs1184137934 |
451 | N>Y | No |
ClinGen TOPMed |
|
|
rs1554139267 CA361270483 |
452 | A>V | No |
ClinGen gnomAD |
|
|
CA3449748 rs574989982 |
453 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1438885907 CA361270495 |
453 | P>S | No |
ClinGen TOPMed |
|
|
rs782739424 CA3449749 |
454 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs781956622 CA3449750 |
456 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361270666 rs1490925820 |
457 | Q>R | No |
ClinGen TOPMed |
|
|
CA3449752 rs782817384 |
458 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782455331 CA3449754 |
459 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA3449753 rs142047105 |
459 | E>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361270785 rs1581011599 |
460 | Y>S | No |
ClinGen Ensembl |
|
|
rs1554139288 CA361270805 |
461 | T>A | No |
ClinGen gnomAD |
|
|
rs1353864944 CA361270823 |
461 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs572716323 CA3449758 |
462 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3449759 COSM1433920 rs376542022 COSM1433921 |
463 | F>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
COSM246442 COSM246441 CA361270912 rs1554139301 |
464 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA361271047 rs1554139308 |
467 | N>I | No |
ClinGen gnomAD |
|
|
rs1554139315 CA361271103 |
468 | N>S | No |
ClinGen gnomAD |
|
|
rs1554139315 CA361271101 |
468 | N>T | No |
ClinGen gnomAD |
|
|
rs1554139317 CA361271164 |
469 | P>Q | No |
ClinGen gnomAD |
|
|
rs1554139317 CA361271169 |
469 | P>R | No |
ClinGen gnomAD |
|
|
CA361271212 rs1302356073 |
470 | P>L | No |
ClinGen TOPMed |
|
|
rs1554139325 CA361271257 |
471 | G>A | No |
ClinGen gnomAD |
|
|
CA361271253 rs1554139325 |
471 | G>D | No |
ClinGen gnomAD |
|
|
rs782215677 CA3449765 |
472 | C>S | No |
ClinGen ExAC gnomAD |
|
|
rs1470514973 CA361271300 |
473 | H>Y | No |
ClinGen TOPMed |
|
|
CA3449768 rs782141289 |
476 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA3449769 rs149941021 |
476 | T>M | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
CA3449770 rs149941021 |
476 | T>R | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
rs1481721691 CA361271526 |
479 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
COSM448779 CA361271532 COSM448780 rs1270005538 |
480 | R>* | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1554139345 CA361271542 |
480 | R>L | No |
ClinGen Ensembl |
|
|
rs1554139348 CA361271611 |
481 | D>E | No |
ClinGen gnomAD |
|
|
CA361271649 rs1554139349 |
482 | A>E | No |
ClinGen gnomAD |
|
|
rs1554139356 CA361271729 |
485 | Q>* | No |
ClinGen gnomAD |
|
|
rs782816662 CA3449776 |
486 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs559771780 CA3449777 |
486 | E>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3449775 rs782816662 |
486 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1285950480 CA361271800 |
488 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1554139363 CA361271792 |
488 | A>P | No |
ClinGen gnomAD |
|
|
rs1554139363 CA361271795 |
488 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
COSM382386 CA361271819 rs1554139367 COSM382385 |
489 | L>M | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA361271835 rs1554139371 |
489 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1554139384 CA361271867 |
490 | V>L | No |
ClinGen gnomAD |
|
|
rs1554139387 CA3449781 |
492 | Y>F | No |
ClinGen Ensembl |
|
|
CA3449783 rs782654567 |
493 | S>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 493 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361271993 rs782654567 |
493 | S>W | No |
ClinGen ExAC gnomAD |
|
|
rs1554139406 CA361272026 |
495 | V>A | No |
ClinGen gnomAD |
|
| TCGA novel | 495 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554139410 CA361272118 |
497 | R>L | No |
ClinGen gnomAD |
|
| TCGA novel | 497 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1581016277 CA361272173 |
498 | R>P | No |
ClinGen Ensembl |
|
|
CA3449786 rs782591406 |
499 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs144864522 CA3449785 |
499 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361272201 rs1554139418 |
500 | G>D | No |
ClinGen gnomAD |
|
|
CA3449788 rs782356855 |
501 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781954427 CA3449789 |
501 | E>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1062181 CA361272209 COSM1062180 rs782356855 |
501 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449790 rs782132633 |
502 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs1554139426 CA361272247 |
502 | R>S | No |
ClinGen gnomAD |
|
|
CA3449794 rs376777545 |
503 | S>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs782372938 CA3449791 |
503 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3609936 CA3449793 rs376777545 COSM3609935 |
503 | S>L | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs782372938 CA3449792 |
503 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376777545 CA361272283 |
503 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3449798 rs146745311 COSM88628 |
505 | S>L | ovary [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs146745311 CA3449799 |
505 | S>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1265674507 CA361272408 |
506 | S>N | No |
ClinGen TOPMed |
|
|
rs6873763 CA3449803 |
508 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782443918 CA3449802 |
508 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA3449801 rs781802507 |
508 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449804 rs782202563 |
509 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs1554139460 CA361272574 |
510 | V>G | No |
ClinGen gnomAD |
|
|
rs1554139451 CA361272570 |
510 | V>L | No |
ClinGen gnomAD |
|
|
rs1554139464 CA361272578 |
511 | H>N | No |
ClinGen gnomAD |
|
|
COSM3696966 rs112458290 COSM3696967 CA3449806 |
512 | T>A | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3449807 rs782295377 |
512 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782295377 CA361272607 |
512 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782405753 CA3449808 |
513 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs781943827 CA3449809 |
514 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA361272683 rs1431713195 |
514 | S>R | No |
ClinGen TOPMed |
|
|
CA361272699 rs1554139478 |
515 | G>R | No |
ClinGen gnomAD |
|
|
CA361272689 rs1554139478 |
515 | G>S | No |
ClinGen gnomAD |
|
|
rs146195620 CA3449810 |
515 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361272729 rs1554139485 |
517 | V>E | No |
ClinGen gnomAD |
|
|
rs1318602549 CA361272727 |
517 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs377090155 CA361272746 |
518 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3449811 rs782359907 |
518 | Y>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449812 rs781952420 |
518 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361272759 rs782040771 |
519 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs78119592 CA3449814 |
519 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361272755 rs78119592 |
519 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449815 rs782040771 |
519 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1168905966 CA361272792 |
521 | Q>E | No |
ClinGen TOPMed |
|
|
rs782456985 CA3449819 |
524 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361272945 rs1461330741 |
526 | E>D | No |
ClinGen TOPMed |
|
|
CA3449820 rs150252824 |
527 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554139549 CA361272948 |
527 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3449822 rs782551463 |
528 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449828 rs147542523 |
533 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361273230 rs1554139562 |
536 | S>N | No |
ClinGen gnomAD |
|
|
CA361273237 CA3449830 rs550364151 |
536 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554139566 CA361273282 |
538 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1356851691 CA361273264 |
538 | R>S | No |
ClinGen TOPMed |
|
|
rs782409910 CA3449833 |
539 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs782096291 CA3449834 |
540 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs140143048 CA128363390 |
540 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
|
CA3449835 rs782724656 |
541 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs568669482 CA128363424 |
542 | V>A | No |
ClinGen 1000Genomes |
|
|
rs781992990 CA3449836 |
542 | V>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449837 rs6889154 |
543 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs6889154 CA361273403 |
543 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449838 rs782801173 |
544 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA3449839 rs781885344 |
546 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3449840 rs782065876 |
548 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1481565497 CA361273540 |
549 | V>L | No |
ClinGen TOPMed |
|
|
CA361273537 rs1481565497 |
549 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1481925151 CA361273583 |
550 | T>K | No |
ClinGen TOPMed |
|
|
rs372615892 CA3449842 |
551 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554139598 CA361273609 |
552 | Q>* | No |
ClinGen gnomAD |
|
|
CA361273616 rs782474622 |
552 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449844 rs782659552 |
553 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA361273665 rs1554139609 |
554 | F>L | No |
ClinGen gnomAD |
|
|
CA3449845 rs781861256 |
554 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1322607138 CA361273693 |
555 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs782569977 CA3449847 |
555 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1062187 CA3449846 rs782569977 COSM1062186 |
555 | V>M | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs200097598 CA3449848 |
556 | L>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449850 rs144435690 |
557 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361273750 rs1409771801 |
558 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA3449851 rs782255657 |
558 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA361273796 rs782367335 |
559 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148440856 CA128363507 |
560 | D>G | No |
ClinGen ESP |
|
|
rs782032676 CA3449853 |
560 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs74684741 CA128363515 |
561 | N>S | No |
ClinGen 1000Genomes gnomAD |
|
|
CA361273833 rs1562406385 |
562 | A>T | No |
ClinGen Ensembl |
|
|
CA3449856 rs553667841 |
563 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3449857 rs553667841 |
563 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM1062188 rs1554139637 COSM1062189 CA361273875 |
564 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA3449861 rs782808688 |
567 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142550829 CA3449859 |
567 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs142550829 CA3449860 |
567 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs542503368 CA3449862 |
568 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361273947 rs542503368 |
568 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs146495947 CA3449863 |
569 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361273987 rs146495947 |
569 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449865 rs781820137 |
570 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs782628696 CA3449867 |
571 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs782295838 CA3449868 |
572 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA361274051 rs1581026651 |
573 | T>A | No |
ClinGen Ensembl |
|
|
rs1265015709 CA361274084 |
574 | G>D | No |
ClinGen TOPMed |
|
|
rs1219663342 CA361274116 |
575 | G>D | No |
ClinGen TOPMed |
|
|
CA3449870 rs782574497 |
575 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs782358250 CA3449872 |
576 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361274134 rs782358250 |
576 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554139673 CA361274149 |
576 | A>V | No |
ClinGen gnomAD |
|
|
CA361274168 rs781959729 |
577 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361274157 rs1554139678 |
577 | A>P | No |
ClinGen gnomAD |
|
|
COSM1062190 rs781959729 CA3449873 COSM1062191 |
577 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA361274185 rs1554139685 |
578 | S>N | No |
ClinGen gnomAD |
|
|
CA361274186 rs782136432 CA3449875 |
578 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs6580012 VAR_059181 CA3449876 |
579 | K>E | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA361274269 rs782077054 |
582 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3449880 rs782077054 |
582 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA361274266 rs1554139692 |
582 | P>S | No |
ClinGen gnomAD |
|
|
rs369590519 CA3449882 |
583 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369590519 CA361274286 |
583 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361274284 rs1345239073 |
583 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs782551276 CA3449883 |
584 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1581028716 CA361274336 |
585 | V>M | No |
ClinGen Ensembl |
|
|
CA3449886 rs564409198 |
587 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554139718 CA361274388 |
587 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
COSM205078 COSM205077 rs564409198 CA361274400 |
587 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449887 rs782430812 |
588 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1554139726 CA361274459 CA361274461 |
589 | H>Q | No |
ClinGen gnomAD |
|
|
rs782211835 CA3449889 |
589 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA361274462 rs1486994052 |
590 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs782530236 CA3449890 |
592 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 594 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 595 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1327692669 CA361274530 |
595 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
COSM4141461 COSM4141460 CA3449892 rs782303922 |
595 | R>H | ovary [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361274541 rs782303922 |
595 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA361274551 rs1554139748 |
596 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361274561 rs1581030380 |
596 | A>V | No |
ClinGen Ensembl |
|
|
CA361274582 rs1562408070 |
597 | V>A | No |
ClinGen Ensembl |
|
|
rs781942867 CA3449895 |
598 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361274586 rs1234618172 |
598 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA361274584 rs1234618172 |
598 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs782332485 CA3449896 |
599 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554139755 CA361274606 |
599 | A>S | No |
ClinGen gnomAD |
|
|
rs782103518 CA3449898 |
600 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA3449897 rs781998967 |
600 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs782103518 CA361274636 |
600 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs782805486 CA3449900 |
601 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA3449899 rs782805486 |
601 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA361274677 rs1554139770 |
602 | G>D | No |
ClinGen gnomAD |
|
|
rs1554139768 CA361274669 |
602 | G>S | No |
ClinGen gnomAD |
|
|
CA3449905 rs782774244 |
603 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA3449904 rs782483674 |
603 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
CA3449907 rs782545854 |
604 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361274732 rs1365552111 |
604 | N>S | No |
ClinGen TOPMed |
|
|
COSM1062200 rs782672387 COSM1062201 CA3449908 |
605 | A>V | Variant assessed as Somatic; 0.0 impact. oesophagus endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361274782 rs1432182351 |
607 | L>V | No |
ClinGen TOPMed |
|
|
COSM137434 COSM137433 CA361274806 rs1554139783 |
608 | S>L | lung Variant assessed as Somatic; 0.0 impact. skin [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA361274804 rs1554139783 |
608 | S>W | No |
ClinGen gnomAD |
|
|
rs782445062 CA3449910 |
609 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA361274814 rs1554139789 |
609 | Y>H | No |
ClinGen gnomAD |
|
|
rs62622825 CA3449912 |
611 | L>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449913 COSM590067 COSM590068 rs782251340 |
613 | P>T | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA3449915 rs782024543 |
614 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs781918147 CA3449918 |
617 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA361275010 rs1554139820 |
618 | P>A | No |
ClinGen gnomAD |
|
|
rs369930708 CA3449920 |
618 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369930708 CA128363831 |
618 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs145175505 CA361275044 |
619 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3449921 rs145175505 |
619 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361275041 rs145175505 |
619 | R>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA361275054 rs1554139831 |
620 | I>F | No |
ClinGen gnomAD |
|
|
rs1554139835 CA361275057 |
620 | I>N | No |
ClinGen gnomAD |
|
|
CA361275051 rs1554139831 |
620 | I>V | No |
ClinGen gnomAD |
|
|
rs782111693 CA3449922 |
621 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449926 rs782703557 |
623 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs200720426 CA128363875 COSM736198 |
623 | R>H | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA361275123 rs1201499380 |
624 | V>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 624 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM3409835 rs1554139855 CA361275171 COSM3409836 |
625 | G>V | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA361275206 rs1554139863 |
627 | Y>H | No |
ClinGen gnomAD |
|
|
rs149174279 CA3449929 |
628 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128363899 rs199959178 |
628 | T>K | No |
ClinGen Ensembl |
|
|
CA361275233 rs149174279 |
628 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361275244 rs1562409820 |
629 | G>S | No |
ClinGen Ensembl |
|
|
CA128363900 rs370596725 |
630 | E>* | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1554139873 CA361275346 |
633 | T>N | No |
ClinGen gnomAD |
|
|
CA3449931 rs782521886 |
634 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781895613 CA3449930 |
634 | T>P | No |
ClinGen ExAC |
|
|
CA361275412 rs1225755586 |
637 | L>M | No |
ClinGen TOPMed |
|
|
CA361275449 CA361275451 rs782176303 |
638 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449935 rs782601520 |
640 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449934 rs782503175 |
640 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361275485 rs782601520 |
640 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782032247 CA3449938 |
641 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs550425757 CA361275491 |
641 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs550425757 CA3449937 |
641 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554139882 COSM163315 CA361275540 COSM163316 |
642 | S>C | lung upper_aerodigestive_tract Variant assessed as Somatic; 0.0 impact. breast [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1554139888 CA361275561 |
644 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
COSM590065 COSM590066 CA361275612 rs146582216 |
646 | R>C | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs146582216 CA3449939 |
646 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139113749 CA361275621 |
646 | R>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA128363977 rs139113749 |
646 | R>P | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA128363953 rs146582216 |
646 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361275646 rs1188408324 |
648 | L>P | No |
ClinGen TOPMed |
|
| TCGA novel | 650 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361275693 rs1198092649 |
650 | L>P | No |
ClinGen TOPMed |
|
|
rs1274411257 CA361275709 |
651 | V>A | No |
ClinGen TOPMed |
|
|
rs1225687958 CA361275734 |
652 | K>* | No |
ClinGen TOPMed |
|
|
rs782735781 CA3449943 |
653 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147078401 CA3449942 |
653 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781849460 CA3449944 |
654 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361275875 rs868909172 |
657 | P>L | No |
ClinGen Ensembl |
|
|
CA3449945 rs539222007 |
657 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3449948 rs781800527 |
658 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449946 rs551486770 |
658 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3449947 rs781800527 |
658 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361275954 rs1554139925 |
661 | A>V | No |
ClinGen gnomAD |
|
|
CA361275965 rs1393236321 |
662 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs782295945 CA3449953 |
662 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA361275962 rs782295945 |
662 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs376226668 CA128364063 |
664 | T>M | No |
ClinGen Ensembl |
|
|
rs782599276 CA3449955 |
665 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs782599276 CA361276010 |
665 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782182747 CA3449956 |
666 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782364875 CA3449957 |
667 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA361276050 rs1251515111 |
668 | S>W | No |
ClinGen TOPMed gnomAD |
|
|
rs781956302 CA3449958 |
669 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA361276087 rs1490736819 |
670 | V>G | No |
ClinGen TOPMed |
|
|
CA3449960 rs782418319 |
671 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3449962 rs782061924 |
672 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs782689799 CA3449963 |
672 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA3449964 rs566433680 |
673 | G>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1554139975 CA361276151 |
673 | G>D | No |
ClinGen gnomAD |
|
|
rs1554139979 CA361276168 |
674 | Q>R | No |
ClinGen gnomAD |
|
|
CA3449965 rs201264675 |
675 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449966 rs782789921 |
675 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554139990 CA361276278 |
678 | A>V | No |
ClinGen gnomAD |
|
|
rs1228911692 CA361276287 |
679 | S>A | No |
ClinGen TOPMed |
|
|
CA3449969 rs782556523 |
680 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782556523 CA3449968 |
680 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449971 rs782456260 |
682 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449972 rs372061063 |
683 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs372061063 CA3449973 |
683 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3449976 rs375387773 |
686 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3449977 rs782324965 |
687 | L>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781915199 CA3449978 |
688 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs782229636 CA3449979 |
689 | P>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
|
rs782229636 CA361276495 |
689 | P>R | No |
ClinGen ExAC TOPMed |
|
|
rs782338807 CA3449980 |
690 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449981 rs76866537 |
691 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201868516 CA128364293 |
692 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
rs201868516 COSM1062203 COSM1062202 CA361276539 |
692 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA361276585 rs1581042433 |
694 | V>G | No |
ClinGen Ensembl |
|
|
CA361276594 rs1449552698 |
695 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361276590 rs1554140032 |
695 | D>H | No |
ClinGen gnomAD |
|
|
rs782706522 CA3449986 |
697 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128364302 rs529239256 |
697 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1554140048 CA361276658 |
698 | V>A | No |
ClinGen gnomAD |
|
|
rs1554140048 CA361276659 |
698 | V>G | No |
ClinGen gnomAD |
|
|
CA3449987 rs781847872 |
698 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 699 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782799879 CA3449989 |
701 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781895761 CA361276729 |
703 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781895761 CA3449990 |
703 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782538291 CA3449991 |
703 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 704 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361276742 rs1554140071 |
704 | I>V | No |
ClinGen gnomAD |
|
|
CA361276771 rs781786542 |
705 | C>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3449993 rs781786542 |
705 | C>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3449992 rs782581679 |
705 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
COSM163313 CA3449995 COSM163314 rs369179028 |
706 | A>E | breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3449994 rs782486323 |
706 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449996 rs369179028 |
706 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3450002 rs373780721 |
709 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361277803 rs373780721 |
709 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782347393 CA3450003 |
709 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554140092 CA361277841 |
711 | L>Q | No |
ClinGen gnomAD |
|
|
CA3450006 rs782119445 |
712 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1426270135 CA361277853 COSM448791 COSM448792 |
712 | V>L | breast [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA3450008 rs781797175 |
713 | L>P | No |
ClinGen ExAC gnomAD |
|
|
COSM125193 rs557665140 CA361277891 |
714 | T>K | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs557665140 CA3450009 |
714 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1476836171 CA361277880 |
714 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
rs557665140 CA128364456 |
714 | T>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs377605294 CA3450010 |
715 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377605294 CA361277898 |
715 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3450012 rs142005953 |
717 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361277953 rs142005953 |
717 | L>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781903895 CA3450014 |
718 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3450013 rs144848413 |
718 | Y>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361277961 rs144848413 |
718 | Y>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782580543 CA3450016 |
720 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782580543 CA361278005 |
720 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3450017 rs782179588 |
722 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 722 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3450018 rs782364771 |
723 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554140138 CA361278078 |
724 | S>P | No |
ClinGen gnomAD |
|
|
rs1554140141 CA361278121 |
726 | L>P | No |
ClinGen gnomAD |
|
|
CA361278116 rs1229435401 |
726 | L>V | No |
ClinGen TOPMed |
|
|
rs374247458 CA3450019 |
727 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361278166 rs1554140144 |
729 | E>* | No |
ClinGen gnomAD |
|
|
CA361278184 rs1554140151 |
730 | G>C | No |
ClinGen gnomAD |
|
|
rs1318662464 CA361278189 |
730 | G>V | No |
ClinGen TOPMed |
|
|
CA361278192 rs1554140161 |
731 | G>E | No |
ClinGen gnomAD |
|
|
CA3450023 rs782010980 |
731 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3450022 rs782010980 |
731 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3450025 rs782301361 |
733 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1392443820 CA361278229 |
733 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361278228 rs1392443820 |
733 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1554140167 CA361278236 |
734 | A>E | No |
ClinGen gnomAD |
|
|
CA361278232 rs1168797267 |
734 | A>T | No |
ClinGen TOPMed |
|
|
rs782774776 CA3450028 |
735 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554140180 CA361278261 |
736 | K>* | No |
ClinGen gnomAD |
|
|
CA361278256 rs1554140180 |
736 | K>Q | No |
ClinGen gnomAD |
|
|
CA3450029 rs781853682 |
736 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs782166064 CA3450030 |
737 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs782797206 CA3450031 |
739 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782797206 CA361278307 |
739 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781804945 CA3450032 |
740 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3450033 rs782436900 |
741 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3450034 rs782763344 |
741 | C>Y | No |
ClinGen ExAC TOPMed |
|
|
CA361278360 rs1562414778 |
742 | S>C | No |
ClinGen Ensembl |
|
|
CA361278367 rs1554140211 |
743 | S>G | No |
ClinGen gnomAD |
|
|
rs781826539 CA361278381 |
743 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781826539 CA3450035 |
743 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782524668 CA3450036 |
744 | A>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1062206 COSM1062207 rs782524668 CA3450037 |
744 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs782302269 CA3450038 |
747 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs782446806 CA3450039 |
748 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1341778048 CA361278475 |
748 | W>R | No |
ClinGen TOPMed |
|
| TCGA novel | 750 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1433932 COSM1433933 rs1380003956 CA361278539 |
751 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1372766659 CA361278567 |
753 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA361278577 rs782332446 |
753 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA361278590 rs1309072020 |
754 | Q>L | No |
ClinGen TOPMed |
|
|
rs782000972 CA3450043 |
755 | P>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 755 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1166477260 CA361278622 |
756 | Q>* | No |
ClinGen TOPMed |
|
|
CA128364631 rs782706533 |
757 | R>K | No |
ClinGen gnomAD |
|
|
rs149448038 CA3450046 |
760 | S>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3450047 rs540680849 |
761 | G>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3450048 rs782710742 |
762 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA3450049 rs145975691 |
763 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs145975691 CA3450050 |
763 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs145975691 CA361278720 |
763 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361278731 rs868934448 |
764 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1554140265 CA361278722 |
764 | P>T | No |
ClinGen gnomAD |
|
|
rs111750019 CA3450052 |
765 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3450053 rs111750019 |
765 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3450051 rs111750019 |
765 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361278738 rs1554140277 |
765 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 766 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 766 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782710429 CA3450054 |
767 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs781782868 CA3450055 |
770 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA361278811 rs1554140287 |
770 | M>L | No |
ClinGen gnomAD |
|
|
rs1554140293 CA361278814 |
770 | M>T | No |
ClinGen gnomAD |
|
|
CA3450056 rs782482933 |
771 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361278825 rs782482933 |
771 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361278836 rs1554140304 |
771 | A>V | No |
ClinGen gnomAD |
|
|
rs1554140305 CA361278838 |
772 | F>L | No |
ClinGen gnomAD |
|
|
rs868913785 CA361278859 |
773 | S>G | No |
ClinGen Ensembl |
|
|
CA361278875 rs1231976546 |
774 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1352929745 CA361278883 |
774 | P>R | No |
ClinGen TOPMed |
|
|
CA361278877 rs1231976546 |
774 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3450058 rs782255150 |
776 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782509207 CA3450059 |
777 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs561761702 CA3450060 |
778 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1294872443 CA361278956 |
779 | D>H | No |
ClinGen TOPMed |
|
|
CA361278990 rs1554140326 |
780 | L>P | No |
ClinGen gnomAD |
|
|
rs1554140327 CA361279014 |
782 | S>A | No |
ClinGen gnomAD |
|
|
CA361279038 rs1554140329 |
783 | V>A | No |
ClinGen gnomAD |
|
|
CA3450064 rs782235898 |
785 | V>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3450063 rs781921417 |
785 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1062210 COSM1062211 CA128364677 rs371819535 |
787 | E>K | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs373997165 CA3450066 |
788 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554140348 CA361279110 |
788 | E>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs373997165 CA3450067 |
788 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3450069 rs181500612 |
789 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782044591 CA3450071 |
790 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs368153999 CA3450070 |
790 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 790 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs375271706 CA3450073 |
794 | D>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128364711 rs930917896 |
795 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361279231 rs1554140377 |
796 | G>V | No |
ClinGen gnomAD |
|
|
CA361279248 rs1488958162 |
798 | K>E | No |
ClinGen TOPMed |
|
|
rs782749981 CA3450075 |
798 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs782073950 CA3454452 |
799 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA361259520 rs1490306705 |
799 | P>S | No |
ClinGen TOPMed |
|
|
rs374951627 CA3454453 |
800 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781913955 CA3454454 |
800 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA3454455 rs781913955 |
800 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782109224 CA3454458 |
805 | D>H | No |
ClinGen ExAC |
|
|
COSM3696815 COSM3696819 COSM3696826 COSM3696817 CA3454459 COSM3696814 COSM3696822 COSM3696816 COSM3696828 COSM3696812 COSM3696820 rs782774245 COSM3696813 COSM3696823 COSM3696825 COSM3696821 COSM3696827 COSM3696818 COSM3696824 |
806 | W>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361259640 rs782774245 |
806 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA3454460 rs141879545 |
807 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454463 rs781815387 |
810 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138901709 CA3454464 |
811 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782686641 CA3454465 |
812 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1363421000 CA361259736 |
813 | R>I | No |
ClinGen TOPMed |
|
|
rs1586790986 CA361259751 |
814 | A>G | No |
ClinGen Ensembl |
|
|
CA3454466 rs782253140 |
815 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454467 rs782336746 |
816 | M>V | No |
ClinGen ExAC |
|
|
CA361259787 rs1554240128 |
817 | H>N | No |
ClinGen gnomAD |
|
|
rs149397164 CA3454468 |
818 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782426631 CA3454484 |
819 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782587733 CA3454485 |
819 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs782426631 CA361260538 |
819 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1181664726 CA361260559 |
820 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361260577 rs1554244276 |
821 | H>P | No |
ClinGen gnomAD |
|
|
COSM1062442 COSM1062448 COSM1062450 rs782273708 COSM1062445 COSM1062454 COSM1062455 COSM1062443 COSM1062452 COSM1062456 COSM1062457 COSM1062451 COSM1062453 COSM1062449 COSM1062447 CA3454486 COSM1062444 |
821 | H>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3454488 rs782634646 |
823 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454487 rs782419098 |
823 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs147537783 CA3454489 |
824 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs981642614 CA128362369 |
825 | A>T | No |
ClinGen Ensembl |
|
|
rs782347331 CA3454490 |
826 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260711 rs1468199443 |
827 | I>V | No |
ClinGen TOPMed |
|
|
rs555523473 CA3454493 |
829 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139355257 CA3454492 |
829 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782025005 CA3454494 |
831 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260802 rs1278779763 |
832 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3454495 rs201991205 |
834 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454497 rs201572428 |
836 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3454496 rs782766562 |
836 | D>V | No |
ClinGen ExAC |
|
|
rs1554244431 CA361260933 |
838 | Q>R | No |
ClinGen gnomAD |
|
|
CA3454498 rs782094765 |
839 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454499 RCV000950135 rs79247475 |
840 | P>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA128362405 rs369053351 |
840 | P>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1554244455 CA361260996 |
841 | T>A | No |
ClinGen gnomAD |
|
|
CA3454501 rs782544627 |
842 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454502 rs577838197 |
844 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454504 rs781852534 |
844 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs781852534 CA3454503 |
844 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs782605920 CA3454505 |
844 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs199851685 CA3454506 |
846 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454507 rs782437404 |
847 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs560422677 CA3454508 |
847 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs560422677 CA3454509 |
847 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361261129 rs782437404 |
847 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782179145 CA3454531 |
848 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454532 rs782321757 |
851 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554262240 CA361268348 |
853 | E>G | No |
ClinGen gnomAD |
|
|
rs781996586 CA3454536 |
859 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1179266 rs782079089 COSM1179264 COSM1179272 COSM1179273 COSM1179269 COSM1179270 COSM1179277 COSM1179268 COSM1179263 COSM1179271 COSM1179278 COSM1179275 COSM1179276 COSM1179265 CA3454537 COSM1179267 COSM1179274 |
860 | A>V | lung prostate [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1588246273 CA361268557 |
862 | V>G | No |
ClinGen Ensembl |
|
|
CA3454540 rs782068657 |
862 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1563727066 CA361268679 |
866 | S>N | No |
ClinGen Ensembl |
|
|
COSM139598 COSM139601 COSM139604 COSM139606 COSM139609 COSM139603 COSM139600 COSM139611 COSM139608 rs1554262287 COSM139599 COSM139607 COSM139602 COSM139605 COSM139610 CA361268865 |
872 | G>E | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs900919931 CA128372514 |
872 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1554262289 CA361268920 |
874 | G>D | No |
ClinGen gnomAD |
|
|
CA3454542 rs575518914 |
876 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175529844 CA361268995 |
877 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3454543 rs782119637 |
879 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454546 rs552954748 |
880 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552954748 CA3454545 |
880 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs373683237 CA3454547 |
881 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1486746921 CA361269173 |
882 | G>S | No |
ClinGen TOPMed |
|
|
CA128372547 rs1057913 |
886 | D>A | No |
ClinGen Ensembl |
|
|
rs371269236 CA3454551 |
886 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454552 rs782334415 |
887 | K>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454553 rs782623559 |
890 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3454555 rs782328874 |
891 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454556 rs200822345 |
892 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454559 rs782009776 |
896 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142720081 CA361269729 |
896 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3454558 rs142720081 |
896 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782087059 CA3454560 |
897 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1289763016 CA361269834 |
899 | I>V | No |
ClinGen TOPMed |
|
|
rs760426957 CA3454562 |
900 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1166265 COSM1166271 COSM1166266 COSM1166268 COSM1166267 COSM1166273 COSM1166276 COSM1166277 COSM1166272 COSM1166264 COSM1166279 rs147351924 CA3454561 COSM1166275 COSM1166269 COSM1166278 COSM1166270 COSM1166274 |
900 | R>W | large_intestine haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA361269875 rs1554262408 |
901 | Q>K | No |
ClinGen gnomAD |
|
|
CA361269953 rs1554262420 |
903 | P>A | No |
ClinGen gnomAD |
|
|
CA361269962 rs1359138927 |
903 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1314860754 CA361269972 |
904 | T>A | No |
ClinGen TOPMed |
|
|
CA361270002 rs1554262437 |
905 | N>K | No |
ClinGen TOPMed |
|
|
CA3454564 rs148436868 |
906 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554262456 CA361270119 |
908 | I>T | No |
ClinGen gnomAD |
|
|
rs781853535 CA3454565 |
908 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529364872 CA128372646 |
909 | D>E | No |
ClinGen Ensembl |
|
|
CA3454567 rs142570778 |
909 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128372638 rs782057926 |
909 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3454568 rs781835321 |
910 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs782451974 CA3454569 |
913 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3454570 rs782578873 |
915 | T>I | No |
ClinGen ExAC |
|
|
rs782274123 CA3454571 |
916 | F>S | No |
ClinGen ExAC gnomAD |
|
|
COSM216699 COSM216705 CA3454573 COSM216710 rs782642898 COSM1158471 COSM216696 COSM216700 COSM216702 COSM216709 COSM216704 COSM216698 COSM216697 COSM216706 COSM216707 COSM216701 COSM216703 COSM216708 |
917 | G>S | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454574 rs782270689 |
919 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs782270689 CA361270554 |
919 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1259591783 CA361270565 |
920 | E>Q | No |
ClinGen TOPMed |
|
|
CA361270593 rs1554262487 |
921 | E>D | No |
ClinGen gnomAD |
|
|
CA3454575 rs782348993 |
922 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs781972089 CA3454577 |
923 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554262492 CA361270633 |
923 | K>R | No |
ClinGen gnomAD |
|
|
rs374660085 CA3454578 |
928 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361270828 rs1554262513 |
929 | K>R | No |
ClinGen gnomAD |
|
|
CA3454579 rs782413551 |
930 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782413551 CA361270853 |
930 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307653192 CA361270984 |
933 | K>N | No |
ClinGen TOPMed |
|
|
CA128372721 rs184181976 |
933 | K>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
rs1554262529 CA361271070 |
936 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782776948 CA3454583 |
938 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3454584 rs781954349 |
941 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361271296 rs1295693430 |
942 | N>D | No |
ClinGen TOPMed |
|
|
rs1554262551 CA361271322 |
942 | N>K | No |
ClinGen gnomAD |
|
|
CA361271306 rs1415929182 |
942 | N>S | No |
ClinGen TOPMed |
|
|
CA128372734 rs958247947 |
943 | S>G | No |
ClinGen Ensembl |
|
|
CA128372735 rs17855798 |
943 | S>N | No |
ClinGen Ensembl |
|
|
COSM1434122 COSM1434119 CA3454585 COSM1434134 COSM1434133 COSM1434130 COSM1434131 COSM1434125 COSM1434126 COSM1434124 COSM1434127 COSM1434129 COSM1434121 COSM1434120 COSM1434123 rs199928168 COSM1434128 COSM1434132 |
944 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA361271405 rs1301104421 |
945 | T>A | No |
ClinGen TOPMed |
|
|
CA361271440 rs1554262572 |
946 | D>E | No |
ClinGen gnomAD |
|
|
CA361271462 rs1463725058 |
947 | N>Y | No |
ClinGen TOPMed |
No associated diseases with Q9Y5H6
9 regional properties for Q9Y5H6
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | ABC transporter-like, ATP-binding domain | 423 - 646 | IPR003439-1 |
| domain | ABC transporter-like, ATP-binding domain | 1208 - 1441 | IPR003439-2 |
| domain | AAA+ ATPase domain | 450 - 623 | IPR003593-1 |
| domain | AAA+ ATPase domain | 1234 - 1417 | IPR003593-2 |
| domain | ABC transporter type 1, transmembrane domain | 86 - 350 | IPR011527-1 |
| domain | ABC transporter type 1, transmembrane domain | 862 - 1157 | IPR011527-2 |
| conserved_site | ABC transporter-like, conserved site | 548 - 562 | IPR017871 |
| domain | CFTR regulator domain | 639 - 851 | IPR025837 |
| domain | Cystic fibrosis transmembrane conductance regulator, ATP-binding cassette domain 1 | 389 - 670 | IPR047082 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium ion binding | Binding to a calcium ion (Ca2+). |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cell adhesion | The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
| homophilic cell adhesion via plasma membrane adhesion molecules | The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell. |
| nervous system development | The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. |
48 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q3SWX5 | CDH6 | Cadherin-6 | Bos taurus (Bovine) | PR |
| P79995 | CDH10 | Cadherin-10 | Gallus gallus (Chicken) | PR |
| Q8UVJ7 | CDHR1 | Cadherin-related family member 1 | Gallus gallus (Chicken) | PR |
| Q5DRC8 | PCDHB6 | Protocadherin beta-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF0 | PCDHA2 | Protocadherin alpha-2 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE4 | PCDHA8 | Protocadherin alpha-8 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE6 | PCDHA6 | Protocadherin alpha-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF2 | PCDHA12 | Protocadherin alpha-12 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE7 | PCDHA5 | Protocadherin alpha-5 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF3 | PCDHA11 | Protocadherin alpha-11 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF4 | PCDHA10 | Protocadherin alpha-10 | Pan troglodytes (Chimpanzee) | PR |
| Q9VJB6 | CadN2 | Putative neural-cadherin 2 | Drosophila melanogaster (Fruit fly) | PR |
| Q9ULB4 | CDH9 | Cadherin-9 | Homo sapiens (Human) | PR |
| P12830 | CDH1 | Cadherin-1 | Homo sapiens (Human) | PR |
| Q9H159 | CDH19 | Cadherin-19 | Homo sapiens (Human) | PR |
| Q9Y6N8 | CDH10 | Cadherin-10 | Homo sapiens (Human) | PR |
| P55285 | CDH6 | Cadherin-6 | Homo sapiens (Human) | PR |
| P19022 | CDH2 | Cadherin-2 | Homo sapiens (Human) | PR |
| Q6ZTQ4 | CDHR3 | Cadherin-related family member 3 | Homo sapiens (Human) | PR |
| Q9BZA8 | PCDH11Y | Protocadherin-11 Y-linked | Homo sapiens (Human) | PR |
| Q08174 | PCDH1 | Protocadherin-1 | Homo sapiens (Human) | PR |
| Q9HC56 | PCDH9 | Protocadherin-9 | Homo sapiens (Human) | PR |
| Q9P2E7 | PCDH10 | Protocadherin-10 | Homo sapiens (Human) | PR |
| Q9Y5H8 | PCDHA3 | Protocadherin alpha-3 | Homo sapiens (Human) | PR |
| Q9UN75 | PCDHA12 | Protocadherin alpha-12 | Homo sapiens (Human) | PR |
| Q9Y5I2 | PCDHA10 | Protocadherin alpha-10 | Homo sapiens (Human) | PR |
| Q9UN72 | PCDHA7 | Protocadherin alpha-7 | Homo sapiens (Human) | PR |
| Q9UN74 | PCDHA4 | Protocadherin alpha-4 | Homo sapiens (Human) | PR |
| Q9Y5I1 | PCDHA11 | Protocadherin alpha-11 | Homo sapiens (Human) | PR |
| Q9Y5H7 | PCDHA5 | Protocadherin alpha-5 | Homo sapiens (Human) | PR |
| Q9UN73 | PCDHA6 | Protocadherin alpha-6 | Homo sapiens (Human) | PR |
| Q9Y5I3 | PCDHA1 | Protocadherin alpha-1 | Homo sapiens (Human) | PR |
| Q9Y5H9 | PCDHA2 | Protocadherin alpha-2 | Homo sapiens (Human) | PR |
| Q9Y5H3 | PCDHGA10 | Protocadherin gamma-A10 | Homo sapiens (Human) | PR |
| O60330 | PCDHGA12 | Protocadherin gamma-A12 | Homo sapiens (Human) | PR |
| Q9Y5G4 | PCDHGA9 | Protocadherin gamma-A9 | Homo sapiens (Human) | PR |
| Q9Y5G0 | PCDHGB5 | Protocadherin gamma-B5 | Homo sapiens (Human) | PR |
| Q9Y5E3 | PCDHB6 | Protocadherin beta-6 | Homo sapiens (Human) | PR |
| Q9Y5F1 | PCDHB12 | Protocadherin beta-12 | Homo sapiens (Human) | PR |
| P09803 | Cdh1 | Cadherin-1 | Mus musculus (Mouse) | PR |
| P15116 | Cdh2 | Cadherin-2 | Mus musculus (Mouse) | PR |
| P70407 | Cdh9 | Cadherin-9 | Mus musculus (Mouse) | PR |
| P97326 | Cdh6 | Cadherin-6 | Mus musculus (Mouse) | PR |
| P70408 | Cdh10 | Cadherin-10 | Mus musculus (Mouse) | PR |
| Q8VHF2 | Cdhr5 | Cadherin-related family member 5 | Mus musculus (Mouse) | PR |
| P55280 | Cdh6 | Cadherin-6 | Rattus norvegicus (Rat) | PR |
| Q9Z1Y3 | Cdh2 | Cadherin-2 | Rattus norvegicus (Rat) | PR |
| Q767I8 | Pcdha4 | Protocadherin alpha-4 | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDYHWRGELG | SWRLLLLLLL | LAAWKVGSGQ | LHYSVPEEAK | HGTFVGRIAQ | DLGLELAELV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PRLFRVASKR | HRDLLEVSLQ | NGILFVNSRI | DREELCGRSA | ECSIHLEVIV | DRPLQVFHVD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VEVKDVNDNP | PVFRVKDQKL | FVSESRMPDS | RFPLEGASDA | DVGANSVLTY | RLSSHDYFML |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DVNSKNDENK | LVELVLRKSL | DREDAPAHHL | FLTATDGGKP | ELTGTVQLLV | TVLDVNDNAP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TFEQSEYEVR | IFENADNGTT | VIKLNASDPD | EGANGAISYS | FNSLVETMVI | DHFSIDRNTG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EIVIRGNLDF | EQENLYKILI | DATDKGHPPM | AGHCTVLVRI | LDKNDNVPEI | ALTSLSLPVR |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EDAQFGTVIA | LISVNDLDSG | ANGQVTCSLM | PHVPFKLVST | FKNYYSLVLD | SALDRERVSA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YELVVTARDG | GSPSLWATAS | LSVEVADVND | NAPAFAQPEY | TVFVKENNPP | GCHIFTVSAR |
| 490 | 500 | 510 | 520 | 530 | 540 |
| DADAQENALV | SYSLVERRVG | ERSLSSYISV | HTESGKVYAL | QPLDHEELEL | LQFQVSARDA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GVPPLGSNVT | LQVFVLDEND | NAPALLEPRV | GGTGGAASKL | VPRSVGAGHV | VAKVRAVDAD |
| 610 | 620 | 630 | 640 | 650 | 660 |
| SGYNAWLSYE | LQPAASSPRI | PFRVGLYTGE | ISTTRVLDEA | DSPRHRLLVL | VKDHGEPALT |
| 670 | 680 | 690 | 700 | 710 | 720 |
| ATATVLVSLV | ESGQAPKASS | RQSAGVLGPE | AALVDVNVYL | IIAICAVSSL | LVLTLLLYTA |
| 730 | 740 | 750 | 760 | 770 | 780 |
| LRCSALPTEG | GCRAGKPTLV | CSSAVGSWSY | SQQQPQRVCS | GEGPPKTDLM | AFSPCLPPDL |
| 790 | 800 | 810 | 820 | 830 | 840 |
| GSVDVGEEQD | LNVDHGLKPR | QPNPDWRYSA | SLRAGMHSSV | HLEEAGILRA | GPGGPDQQWP |
| 850 | 860 | 870 | 880 | 890 | 900 |
| TVSSATPEPE | AGEVSPPVGA | GVNSNSWTFK | YGPGNPKQSG | PGELPDKFII | PGSPAIISIR |
| 910 | 920 | 930 | 940 | ||
| QEPTNSQIDK | SDFITFGKKE | ETKKKKKKKK | GNKTQEKKEK | GNSTTDNSDQ |