Q9UN73
Gene name |
PCDHA6 (CNRS2) |
Protein name |
Protocadherin alpha-6 |
Names |
PCDH-alpha-6 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:56142 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9UN73
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9UN73-F1 | Predicted | AlphaFoldDB |
1011 variants for Q9UN73
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000508600 CA3454461 rs150254638 |
807 | R>H | Hirschsprung disease, susceptibility to, 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA3448102 rs150637034 |
2 | V>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782318154 CA3448101 |
2 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361224576 rs1554131020 |
5 | P>L | No |
ClinGen gnomAD |
|
|
rs1554131020 CA361224580 |
5 | P>Q | No |
ClinGen gnomAD |
|
|
CA361224571 rs1554131019 |
5 | P>T | No |
ClinGen gnomAD |
|
|
rs782771063 CA3448104 |
6 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs970956452 CA128347892 |
7 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs375013243 CA3448105 |
7 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA gnomAD |
|
rs923663233 CA128347904 |
9 | L>S | No |
ClinGen Ensembl |
|
|
rs1182345858 CA361224631 |
10 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361224665 rs781796281 |
13 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448108 rs781796281 |
13 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554131030 CA361224679 |
15 | L>F | No |
ClinGen gnomAD |
|
|
rs782456632 CA3448109 |
16 | L>H | No |
ClinGen ExAC gnomAD |
|
|
rs782794601 COSM1433837 CA3448110 |
17 | P>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs782794601 CA3448111 |
17 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361224715 rs1554131033 |
19 | L>P | No |
ClinGen gnomAD |
|
|
rs782497466 CA3448112 |
21 | L>F | No |
ClinGen ExAC |
|
|
rs1479414011 CA361224739 |
22 | A>P | No |
ClinGen TOPMed |
|
|
CA3448115 rs782492216 |
23 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448114 rs782219440 |
23 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA361224763 rs1244863106 |
24 | W>* | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 24 | W>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361224770 rs1554131041 |
25 | K>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1554131043 CA361224775 |
25 | K>M | No |
ClinGen gnomAD |
|
|
rs1554131044 CA361224779 |
25 | K>N | No |
ClinGen gnomAD |
|
|
CA3448116 rs782583296 |
26 | V>L | No |
ClinGen ExAC TOPMed |
|
|
CA361224790 rs1554131051 |
27 | G>R | No |
ClinGen gnomAD |
|
|
CA3448117 CA361224809 rs782277411 |
28 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361224813 rs782133322 |
29 | G>C | No |
ClinGen TOPMed |
|
|
CA128347951 rs782133322 |
29 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1554131060 CA361224818 |
29 | G>V | No |
ClinGen Ensembl |
|
|
rs1377583653 CA361224822 |
30 | Q>* | No |
ClinGen TOPMed |
|
|
CA361224829 rs782434045 |
30 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA361224824 rs1554131069 |
30 | Q>P | No |
ClinGen Ensembl |
|
|
rs781983221 CA3448119 |
31 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA361224851 rs1554131073 |
32 | H>Q | No |
ClinGen gnomAD |
|
|
CA361224845 rs1554131070 |
32 | H>Y | No |
ClinGen gnomAD |
|
|
CA3448122 rs369197090 |
33 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448121 rs782330497 |
33 | Y>N | No |
ClinGen ExAC gnomAD |
|
|
CA361224858 rs369197090 |
33 | Y>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361224871 rs1554131077 |
34 | S>C | No |
ClinGen gnomAD |
|
|
CA361224873 rs1554131077 |
34 | S>F | No |
ClinGen gnomAD |
|
|
rs1581852903 CA361224867 |
34 | S>P | No |
ClinGen Ensembl |
|
|
rs782720810 CA3448126 |
36 | P>S | No |
ClinGen ExAC TOPMed |
|
|
rs782727109 CA3448127 |
37 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA361224936 rs200919454 |
40 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200919454 CA3448128 |
40 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1161769031 CA361224954 |
41 | H>Q | No |
ClinGen TOPMed |
|
| TCGA novel | 41 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448129 rs782783645 |
42 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361224970 rs1554131099 |
43 | T>N | No |
ClinGen gnomAD |
|
|
CA361224984 rs1417761655 |
44 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1554131106 CA361224989 |
45 | V>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 45 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1581853720 CA361225006 |
47 | R>G | No |
ClinGen Ensembl |
|
|
rs1554131117 CA361225008 |
47 | R>Q | No |
ClinGen gnomAD |
|
|
rs781807408 CA3448134 |
49 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781807408 CA3448133 |
49 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782505632 CA3448137 |
50 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA361225038 rs782505632 |
50 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA361225057 rs1354249187 |
52 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3448139 rs782220355 |
55 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448141 rs782592737 |
56 | L>P | No |
ClinGen ExAC |
|
|
CA3448140 rs376175688 |
56 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782284717 CA3448142 |
57 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554131139 CA361225100 |
57 | A>T | No |
ClinGen gnomAD |
|
|
rs782284717 COSM3735691 CA361225106 |
57 | A>V | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3448144 rs781990065 |
58 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA3448145 rs782131288 |
59 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA361225130 rs201116419 |
60 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201116419 CA3448146 |
60 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1744056 rs781972651 CA3448147 |
61 | P>L | biliary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA3448148 rs781972651 |
61 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361225139 rs1301296827 |
61 | P>S | No |
ClinGen TOPMed |
|
|
COSM241073 rs199941722 CA3448149 |
62 | R>C | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
COSM205067 rs373467207 CA3448150 |
62 | R>H | large_intestine Variant assessed as Somatic; 4.619e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3448151 rs373467207 |
62 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361225153 rs1158544001 |
63 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA3448153 rs143573134 |
64 | F>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448155 rs782491543 |
65 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1200053101 CA361225173 |
65 | R>M | No |
ClinGen TOPMed |
|
|
rs1479873419 CA361225180 |
65 | R>S | No |
ClinGen TOPMed |
|
|
rs781798929 CA3448156 |
66 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554131172 CA361225198 |
67 | A>P | No |
ClinGen gnomAD |
|
|
rs1554131172 CA361225196 |
67 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1554131175 CA361225261 |
70 | D>E | No |
ClinGen gnomAD |
|
|
CA3448157 rs782531826 |
71 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554131180 CA361225289 |
72 | E>G | No |
ClinGen gnomAD |
|
|
rs377452254 CA3448158 |
72 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3448160 COSM589644 rs544173556 |
73 | D>E | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs782603624 CA3448161 |
74 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA3448162 rs782225981 |
75 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448164 rs781937389 |
78 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781937389 CA361225398 |
78 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554131212 CA361225407 |
79 | L>V | No |
ClinGen gnomAD |
|
|
CA361225447 rs782374670 |
81 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448167 rs371049380 |
82 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs148032873 CA3448169 |
86 | V>A | No |
ClinGen ESP ExAC gnomAD |
|
|
CA361225510 rs1554131222 |
86 | V>M | No |
ClinGen gnomAD |
|
|
CA361225565 rs1554131244 |
88 | S>Y | No |
ClinGen gnomAD |
|
|
CA3448170 rs781786009 |
89 | R>W | No |
ClinGen ExAC TOPMed |
|
|
CA361225609 rs1341252383 |
91 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1341252383 CA361225611 |
91 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA361225636 rs1554131260 |
92 | R>H | No |
ClinGen gnomAD |
|
|
CA3448175 rs781908580 |
94 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA3448177 rs150162226 COSM1329072 |
97 | G>R | ovary [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs150162226 CA3448178 |
97 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448179 rs782489134 COSM317821 |
98 | R>Q | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 98 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554131277 CA361225759 |
99 | S>R | No |
ClinGen gnomAD |
|
|
CA3448180 rs782571134 |
100 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1469672004 CA361225800 |
101 | E>G | No |
ClinGen TOPMed |
|
|
CA361225819 rs1554131283 |
102 | C>G | No |
ClinGen gnomAD |
|
|
CA361225862 rs1554131287 |
104 | I>T | No |
ClinGen gnomAD |
|
| TCGA novel | 105 | H>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1172439266 CA361225920 |
107 | E>G | No |
ClinGen TOPMed |
|
|
CA3448182 rs782541724 |
108 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782639326 CA3448183 |
109 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1554131299 CA361225971 |
110 | V>A | No |
ClinGen gnomAD |
|
|
COSM1130905 rs138737999 CA3448186 |
111 | D>E | prostate [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA3448185 rs782343743 |
111 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs782176995 CA3448187 |
112 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782176995 CA3448188 |
112 | R>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782010399 CA3448189 |
113 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1554131312 CA361226013 |
113 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 116 | V>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs141978908 CA3448190 |
116 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448191 rs141978908 |
116 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448192 rs782008680 |
120 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA361226157 rs782092268 |
121 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA3448193 rs782092268 |
121 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA361226201 rs1220650558 |
123 | V>A | No |
ClinGen TOPMed |
|
|
rs1220650558 CA361226203 |
123 | V>G | No |
ClinGen TOPMed |
|
|
rs782747374 CA3448194 |
124 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361226226 rs1554131324 |
125 | D>N | No |
ClinGen gnomAD |
|
|
CA361226232 rs1554131324 |
125 | D>Y | No |
ClinGen gnomAD |
|
|
rs377600907 CA128348316 |
126 | I>V | No |
ClinGen ESP |
|
|
CA361226292 rs1269610304 |
128 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs544725649 CA3448196 |
129 | N>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs577643736 CA3448195 |
129 | N>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361226340 rs868942334 |
130 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361226335 rs868942334 |
130 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA361226377 rs1554131330 |
132 | L>F | No |
ClinGen gnomAD |
|
|
rs782527541 CA3448199 |
132 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448200 rs139629080 |
134 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs139629080 CA3448201 |
134 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361226423 rs1554131337 |
135 | V>E | No |
ClinGen gnomAD |
|
|
rs1333830874 CA361226418 |
135 | V>L | No |
ClinGen TOPMed |
|
|
COSM1433805 CA361226436 rs1465778888 |
136 | E>* | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA3448205 rs1165644843 |
138 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA3448204 rs1165644843 |
138 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA3448208 CA3448207 rs782277050 |
138 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA361226474 rs1165644843 |
138 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3448210 rs540932674 |
140 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs375061677 CA3448213 |
143 | Y>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 145 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782114453 CA3448216 |
145 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs782768043 CA3448217 |
148 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361226684 rs1554131358 |
149 | D>V | No |
ClinGen gnomAD |
|
|
CA361226758 rs868937296 |
153 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs868937296 CA361226754 |
153 | P>T | No |
ClinGen gnomAD |
|
|
CA361226778 rs1581860327 |
154 | L>Q | No |
ClinGen Ensembl |
|
|
CA361226785 rs1554131369 |
155 | E>* | No |
ClinGen gnomAD |
|
|
rs1358626922 CA361226793 |
155 | E>G | No |
ClinGen TOPMed |
|
|
CA3448220 rs782698898 |
156 | G>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 156 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448221 rs782698898 |
156 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA361226813 rs781859688 |
157 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs781859688 CA3448224 |
157 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA3448223 rs782678285 |
157 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA361226811 rs782678285 COSM394018 |
157 | A>T | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361226854 rs1443461265 |
159 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA3448226 rs148766603 |
159 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs148766603 COSM1062020 CA361226835 |
159 | D>N | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA361226866 rs1554131402 |
160 | A>E | No |
ClinGen gnomAD |
|
|
CA361226893 rs1353542973 |
162 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
CA361226911 rs868943302 |
163 | G>D | No |
ClinGen Ensembl |
|
|
rs1554131414 CA361226932 |
164 | S>* | No |
ClinGen gnomAD |
|
|
CA361226979 rs1562298438 |
167 | I>V | No |
ClinGen Ensembl |
|
|
CA361227028 rs1365615001 |
169 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1382100762 CA361227114 |
173 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1562298530 CA361227118 |
174 | S>T | No |
ClinGen Ensembl |
|
|
rs782081687 CA3448233 |
175 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782356866 CA3448234 |
176 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs782356866 CA361227155 |
176 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs782356866 CA361227158 |
176 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782059484 CA3448236 |
177 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs367748457 CA3448235 |
177 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361227212 rs1202747267 |
178 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1292534909 CA361227218 CA361227223 COSM1062022 |
179 | G>R | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD NCI-TCGA |
|
rs1221844247 CA361227250 |
181 | D>V | No |
ClinGen TOPMed |
|
|
CA3448239 rs781898636 |
182 | V>A | No |
ClinGen ExAC |
|
|
CA3448238 rs782780518 |
182 | V>M | No |
ClinGen ExAC |
|
| TCGA novel | 184 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 187 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448237 rs781991870 |
188 | D>E | No |
ClinGen ExAC |
|
|
rs371704232 CA128348528 |
189 | N>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA3448241 rs782783283 |
192 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs111411595 CA3448242 |
192 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448243 rs782486776 |
193 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs150883390 CA128348552 |
194 | L>F | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1562298994 CA361227486 COSM262774 |
197 | K>N | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs184176193 CA3448245 |
199 | S>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782552925 CA3448246 |
201 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1373122002 CA361227514 |
201 | D>N | No |
ClinGen TOPMed |
|
|
CA361227521 rs1554131461 |
202 | R>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3448247 rs782689416 |
203 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448248 rs782260049 CA361227533 |
203 | E>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC gnomAD NCI-TCGA |
|
CA361227540 rs1438120324 |
204 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA361227542 rs1554131471 |
205 | A>T | No |
ClinGen gnomAD |
|
|
CA3448249 rs782337385 |
206 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1301928417 CA361227565 |
208 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361227563 rs1345759018 |
208 | H>R | No |
ClinGen TOPMed |
|
| TCGA novel | 208 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs142386076 CA3448251 |
209 | N>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782321949 CA3448252 |
209 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA361227584 rs1554131483 |
211 | F>C | No |
ClinGen gnomAD |
|
|
rs782016889 CA3448253 |
211 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA361227595 rs1554131485 |
213 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 213 | T>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361227605 rs1554131491 |
215 | T>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3448256 rs782007465 |
216 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA128348601 rs201515728 |
217 | G>A | No |
ClinGen 1000Genomes gnomAD |
|
|
rs201515728 CA361227620 COSM1696265 |
217 | G>E | skin [Cosmic] | No |
ClinGen cosmic curated 1000Genomes gnomAD |
|
rs1554131498 CA361227618 |
217 | G>R | No |
ClinGen gnomAD |
|
|
CA361227623 rs1159793730 |
218 | G>S | No |
ClinGen TOPMed |
|
|
rs782086693 CA3448257 |
220 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3448260 rs782072726 |
224 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1479089206 CA361227666 |
225 | T>A | No |
ClinGen TOPMed |
|
|
CA361227676 rs1554131518 |
226 | V>A | No |
ClinGen gnomAD |
|
|
rs1554131522 CA361227691 |
228 | L>R | No |
ClinGen gnomAD |
|
|
rs200187130 CA3448263 |
229 | L>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs527648433 CA3448264 |
230 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782429400 CA361227704 |
231 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA3448266 rs782429400 |
231 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs781835903 CA3448265 |
231 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA3448269 rs782562067 |
232 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1554131542 CA361227719 |
234 | D>G | No |
ClinGen gnomAD |
|
|
rs868938692 CA361227715 |
234 | D>N | No |
ClinGen Ensembl |
|
|
rs1554131543 CA361227733 |
236 | N>S | No |
ClinGen gnomAD |
|
|
rs147769613 CA3448272 |
237 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448271 rs782262821 |
237 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 238 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554131556 CA361227758 |
240 | P>A | No |
ClinGen gnomAD |
|
|
rs1221308735 CA361227760 |
240 | P>H | No |
ClinGen TOPMed |
|
|
CA3448274 rs782185019 |
241 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554131564 CA361227767 |
241 | T>S | No |
ClinGen gnomAD |
|
|
CA361227770 rs1554131566 |
242 | F>L | No |
ClinGen gnomAD |
|
|
rs192366589 CA128348775 |
243 | E>D | No |
ClinGen 1000Genomes |
|
|
CA3448275 rs140245330 |
243 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361227782 rs1402518398 |
244 | Q>* | No |
ClinGen TOPMed |
|
|
CA361227783 rs1402518398 |
244 | Q>E | No |
ClinGen TOPMed |
|
|
rs782025213 CA3448276 |
246 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554131575 CA361227807 |
247 | Y>C | No |
ClinGen gnomAD |
|
|
rs149898673 CA361227811 COSM1062028 |
248 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs149898673 CA3448278 |
248 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3448279 rs781946751 |
249 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA361227818 rs1554131583 |
249 | V>I | No |
ClinGen gnomAD |
|
|
CA3448281 rs782693809 |
251 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs145020293 CA3448280 |
251 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361227841 rs1177890960 CA361227842 |
252 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1554131594 CA361227838 |
252 | F>S | No |
ClinGen gnomAD |
|
|
CA3448283 rs782534915 |
255 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 255 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 255 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448286 rs782509409 |
258 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1554131612 CA361227892 |
260 | T>A | No |
ClinGen gnomAD |
|
|
CA361227895 rs1176044523 |
260 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
rs782226224 CA3448289 |
262 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361227907 rs1554131616 |
262 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs542612445 CA3448290 |
263 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA361227917 rs1187191951 |
264 | L>P | No |
ClinGen TOPMed |
|
|
CA128348846 rs144747110 |
264 | L>V | No |
ClinGen ESP |
|
|
rs189039710 CA3448291 |
267 | S>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361227937 rs189039710 |
267 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361227939 rs1554131624 |
268 | D>H | No |
ClinGen Ensembl |
|
|
CA361227947 rs138760871 |
269 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782263105 CA3448295 |
269 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448294 rs782263105 |
269 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782263105 CA3448296 |
269 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 270 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448298 rs782399139 |
272 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782399139 CA361227966 |
272 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448297 rs782061233 |
272 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1213488123 CA361227970 |
273 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361227971 rs1213488123 |
273 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs782033423 CA3448299 |
273 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs782100050 CA3448303 |
274 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
CA361227984 rs1453075151 |
275 | G>A | No |
ClinGen TOPMed |
|
|
rs1405025133 CA361227991 |
276 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA3448304 rs781899143 |
277 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448306 rs544529014 |
279 | Y>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361228028 rs1554131652 |
282 | N>S | No |
ClinGen gnomAD |
|
|
rs782688570 CA3448308 |
282 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 283 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448310 rs145659771 |
283 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs533314438 CA3448311 |
284 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3448312 rs782170729 |
284 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128349021 rs782549772 |
285 | V>A | No |
ClinGen gnomAD |
|
|
rs1417954039 CA361228044 |
285 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs377572037 CA361228052 |
286 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361228050 rs1554131658 |
286 | A>S | No |
ClinGen gnomAD |
|
|
CA3448313 rs377572037 |
286 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs267600392 CA128349044 |
287 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs782650081 CA3448314 |
288 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1458772035 CA361228081 |
291 | D>Y | No |
ClinGen TOPMed |
|
|
rs1203175896 CA361228094 |
292 | H>Q | No |
ClinGen TOPMed |
|
|
rs1305310747 CA361228095 |
293 | F>I | No |
ClinGen TOPMed |
|
|
CA361228113 rs1314280199 |
295 | I>V | No |
ClinGen TOPMed |
|
|
rs1581868546 CA361228121 |
296 | D>A | No |
ClinGen Ensembl |
|
|
CA3448316 rs782373656 |
297 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448317 rs781997527 |
297 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs1554131679 CA361228129 |
298 | N>H | No |
ClinGen gnomAD |
|
|
rs782081374 CA3448318 |
299 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 300 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448320 rs781921074 |
300 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA361228151 rs1448794647 |
301 | E>G | No |
ClinGen TOPMed |
|
|
rs1312575458 CA361228148 |
301 | E>Q | No |
ClinGen TOPMed |
|
| TCGA novel | 301 | E>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448321 rs782064590 |
302 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs781911501 CA3448323 |
303 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs782809023 CA3448322 |
303 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs782124467 CA3448324 |
305 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1642628 rs267600393 CA128349078 |
305 | R>W | stomach [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA361228178 rs1352786477 |
306 | G>D | No |
ClinGen TOPMed |
|
|
CA361228184 rs1554131712 |
307 | N>T | No |
ClinGen gnomAD |
|
|
rs1562302512 CA361228192 |
308 | L>S | No |
ClinGen Ensembl |
|
|
CA361228197 rs1554131717 |
309 | D>H | No |
ClinGen gnomAD |
|
|
rs781827151 CA3448326 |
313 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs782434715 CA3448327 |
316 | Y>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3448328 rs782572274 |
318 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1182116205 CA361228273 |
319 | L>V | No |
ClinGen TOPMed |
|
|
rs782641551 CA3448331 |
320 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1554131730 CA361228282 |
320 | I>S | No |
ClinGen gnomAD |
|
|
CA3448330 rs782537615 |
320 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA361228291 rs1421296539 |
321 | D>A | No |
ClinGen TOPMed |
|
| TCGA novel | 321 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 322 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 323 | T>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361228334 rs1250772416 |
324 | D>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 325 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554131736 CA361228363 |
326 | G>D | No |
ClinGen gnomAD |
|
| TCGA novel | 328 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448333 rs782464735 |
329 | P>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782260408 CA3448332 |
329 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs375670586 CA128349141 |
330 | M>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs782622657 CA361228438 |
331 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs782622657 CA3448334 |
331 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1581870345 CA361228471 |
333 | H>L | No |
ClinGen Ensembl |
|
|
CA361228465 rs1581870295 |
333 | H>Y | No |
ClinGen Ensembl |
|
|
rs1293242717 CA361228493 |
334 | C>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA3448337 rs782016683 |
334 | C>F | No |
ClinGen ExAC |
|
|
rs1222604316 CA361228507 |
335 | T>I | No |
ClinGen TOPMed |
|
| TCGA novel | 336 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448338 rs782297195 |
337 | L>S | No |
ClinGen ExAC |
|
| TCGA novel | 339 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361229369 rs1554131755 |
339 | R>T | No |
ClinGen gnomAD |
|
|
rs782377147 CA3448339 |
341 | L>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 344 | N>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554131759 CA361229418 |
346 | N>D | No |
ClinGen gnomAD |
|
|
CA3448340 rs782009318 |
346 | N>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782090577 CA3448341 |
347 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448343 rs782090577 |
347 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782090577 CA3448342 |
347 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554131766 CA361229427 |
348 | P>A | No |
ClinGen gnomAD |
|
|
rs782815088 CA3448345 |
348 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs1554131767 CA361229443 |
350 | I>K | No |
ClinGen gnomAD |
|
|
rs781852790 CA3448346 |
351 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs372034322 CA3448349 |
352 | L>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372034322 CA3448348 |
352 | L>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1306050057 CA361229456 |
353 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1554131777 CA361229461 |
354 | S>T | No |
ClinGen gnomAD |
|
|
CA3448350 rs782437827 |
356 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1371458917 CA361229488 |
358 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1425441168 CA361229494 |
359 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA361229493 rs1425441168 |
359 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs782649346 CA3448354 |
360 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554131784 CA361229503 |
361 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 362 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782265434 CA3448355 |
363 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA361229520 rs782265434 |
363 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs782265434 CA361229519 COSM448757 |
363 | A>T | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3448356 rs782346436 |
364 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1554131789 CA361229535 |
365 | F>S | No |
ClinGen gnomAD |
|
|
rs1364701507 CA361229547 |
367 | T>A | No |
ClinGen TOPMed |
|
|
CA3448357 rs781977762 |
367 | T>I | No |
ClinGen ExAC |
|
|
rs1554131794 CA361229553 |
368 | V>A | No |
ClinGen TOPMed |
|
|
rs782193607 CA3448358 |
368 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA361229563 rs1416881170 |
370 | A>P | No |
ClinGen TOPMed |
|
|
CA3448363 rs782768322 |
371 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782768322 CA3448362 |
371 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA3448364 rs782093058 |
372 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs375156998 CA361229584 |
373 | S>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
COSM1542014 CA3448365 rs782704197 |
374 | V>L | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs782536871 CA361229596 |
375 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA3448366 rs781810260 |
375 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs369380988 CA3448368 |
376 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361229609 rs1206771984 |
377 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA3448369 rs149405425 |
377 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361229612 rs1259859685 |
378 | D>H | No |
ClinGen TOPMed |
|
|
CA3448371 rs782598138 |
379 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361229624 rs1554131821 |
380 | G>S | No |
ClinGen gnomAD |
|
|
CA3448373 rs782442192 |
381 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA361229641 rs782289656 |
382 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361229645 rs1554131830 |
383 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA128349303 rs567269256 |
383 | G>R | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1554131832 CA361229648 |
384 | Q>* | No |
ClinGen gnomAD |
|
|
CA361229649 rs1554131832 |
384 | Q>K | No |
ClinGen gnomAD |
|
|
rs782370441 CA3448376 |
384 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361229655 rs1386334343 |
385 | V>M | No |
ClinGen TOPMed |
|
| TCGA novel | 386 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs61748954 CA3448379 |
386 | N>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 387 | C>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361229671 rs1554131837 |
387 | C>Y | No |
ClinGen gnomAD |
|
|
rs413874 CA361229705 |
392 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361229707 rs1194699670 |
393 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA361229709 rs1194699670 |
393 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1261022532 CA361229718 |
394 | P>L | No |
ClinGen TOPMed |
|
|
rs1554131858 CA361229738 |
397 | L>P | No |
ClinGen gnomAD |
|
|
rs1554131862 CA361229743 |
398 | V>E | No |
ClinGen gnomAD |
|
|
CA3448386 rs571424978 |
399 | S>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361229756 rs1554131868 |
400 | T>I | No |
ClinGen gnomAD |
|
|
rs1554131867 CA361229753 |
400 | T>S | No |
ClinGen gnomAD |
|
|
CA361229764 rs1323098872 |
401 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361229767 rs1554131872 |
402 | K>E | No |
ClinGen gnomAD |
|
|
CA3448387 rs17844301 |
403 | N>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs145661045 CA3448390 |
405 | Y>* | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782549490 CA3448391 |
406 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361229852 rs1562305463 |
408 | V>M | No |
ClinGen Ensembl |
|
|
rs1327527947 CA361229868 |
409 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA361229866 rs1327527947 |
409 | L>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs374279555 CA3448395 |
412 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782173510 CA3448396 |
413 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA361229945 rs1554131892 |
415 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3448397 rs377650709 |
415 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448398 rs782678645 |
416 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448399 rs782290596 |
417 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA361229973 rs1554131894 |
417 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs17844302 CA3448400 |
417 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1426784305 CA361229991 |
418 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361229989 rs1426784305 |
418 | V>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361230004 rs1475492730 |
419 | S>W | No |
ClinGen TOPMed |
|
|
CA361230021 rs1581876289 |
420 | A>V | No |
ClinGen Ensembl |
|
|
CA361230025 rs1554131901 |
421 | Y>H | No |
ClinGen gnomAD |
|
|
CA361230060 rs1554131903 |
423 | L>S | No |
ClinGen gnomAD |
|
|
rs1190991665 CA361230097 |
426 | T>A | No |
ClinGen TOPMed |
|
|
CA3448404 rs782364481 |
426 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361230093 rs1190991665 |
426 | T>P | No |
ClinGen TOPMed |
|
|
CA361230119 rs1243458912 |
427 | A>G | No |
ClinGen TOPMed |
|
| TCGA novel | 428 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361230125 rs1554131911 |
428 | R>Q | No |
ClinGen gnomAD |
|
|
rs1202815393 CA361230122 COSM2156647 |
428 | R>W | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA361230135 rs1581876874 |
429 | D>A | No |
ClinGen Ensembl |
|
|
rs1554131916 CA361230166 |
430 | G>A | No |
ClinGen gnomAD |
|
|
rs150962684 CA3448408 CA3448407 |
430 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs150962684 CA361230153 |
430 | G>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 432 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361230198 rs1554131920 |
433 | P>T | No |
ClinGen gnomAD |
|
|
rs1554131925 CA361230224 |
435 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1554131933 CA361230253 |
437 | A>S | No |
ClinGen gnomAD |
|
|
CA3448413 rs781838983 |
437 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs782436371 CA3448414 |
438 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA3448415 rs782726081 |
438 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782436371 CA361230266 |
438 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs1357066039 CA361230287 |
439 | A>G | No |
ClinGen TOPMed |
|
|
CA3448417 rs782568232 |
440 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782568232 CA361230288 |
440 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448418 rs782626268 |
440 | S>R | No |
ClinGen ExAC |
|
|
rs782476572 CA361230319 CA3448420 |
441 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448419 rs782265720 |
441 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1554131949 CA361230396 |
445 | V>G | No |
ClinGen gnomAD |
|
|
rs1554131951 CA361230406 |
446 | A>S | No |
ClinGen gnomAD |
|
|
rs1554131952 CA361230424 |
447 | D>H | No |
ClinGen gnomAD |
|
|
rs782028697 CA3448424 |
448 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs782333114 CA361230445 |
448 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782333114 CA3448423 |
448 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448426 rs370852008 |
451 | N>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA3448427 rs781944675 |
452 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374035546 CA3448429 |
453 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361230572 rs374035546 |
453 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1272296537 CA361230574 |
454 | A>P | No |
ClinGen TOPMed |
|
|
CA361230619 rs1362203038 |
456 | A>S | No |
ClinGen TOPMed |
|
|
CA361230615 COSM1062044 rs1362203038 |
456 | A>T | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA361230626 rs1554131982 |
456 | A>V | No |
ClinGen gnomAD |
|
|
rs782148698 CA3448431 |
457 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 457 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361230640 rs1245659020 |
458 | P>A | No |
ClinGen TOPMed |
|
|
CA3448433 rs373766273 |
459 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448432 rs373766273 |
459 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373766273 CA361230649 |
459 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361230670 rs1281659307 |
461 | T>P | No |
ClinGen TOPMed |
|
|
CA3448437 rs377135928 |
464 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448438 rs782593080 |
465 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA361230726 rs1554132010 |
466 | E>K | No |
ClinGen gnomAD |
|
|
CA361230770 rs1366081374 |
468 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361230768 rs1366081374 |
468 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
rs782505184 CA3448440 |
469 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3448442 rs527776969 |
470 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed |
|
|
CA361230790 rs1162907768 |
470 | P>S | No |
ClinGen TOPMed |
|
|
rs542651929 CA361230799 |
471 | G>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3448445 rs542651929 |
471 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA361230804 rs1470600823 |
472 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
rs782037599 CA3448447 |
476 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782037599 CA361230853 |
476 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554132035 CA361230872 |
478 | S>C | No |
ClinGen gnomAD |
|
|
rs113031368 CA128349799 |
479 | A>V | No |
ClinGen gnomAD |
|
|
CA3448450 rs781954491 |
480 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs781954491 CA361230893 COSM736250 |
480 | R>G | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3448451 rs550072556 |
481 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361230942 rs1554132056 |
482 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 484 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1286115535 CA361230995 |
485 | Q>R | No |
ClinGen TOPMed |
|
|
rs781814274 CA3448453 |
486 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1302023406 CA361231047 |
487 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA361231054 rs1554132078 |
488 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs138069346 CA3448457 |
489 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554132089 CA361231108 |
490 | V>A | No |
ClinGen gnomAD |
|
|
CA3448459 COSM1739180 rs781787659 |
492 | Y>H | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA361231144 rs1554132093 |
492 | Y>S | No |
ClinGen gnomAD |
|
|
CA3448460 rs532373432 |
493 | S>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs532373432 CA361231174 |
493 | S>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3448461 rs532373432 |
493 | S>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782653783 CA3448464 |
495 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs143213882 CA3448466 |
497 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM448759 rs1481552888 CA361231238 |
497 | R>W | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1198811288 CA361231246 |
498 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA3448470 rs781976158 |
499 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA3448468 rs782071817 |
499 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs782071817 CA3448469 |
499 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA3448474 rs141465004 |
501 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448473 rs781837602 |
501 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs147522996 CA3448476 |
502 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361231325 rs147522996 |
502 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361231333 rs1554132105 |
502 | R>L | No |
ClinGen gnomAD |
|
|
CA361231338 rs782543757 |
503 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782543757 CA3448477 |
503 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782543757 CA128349890 |
503 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554132112 CA361231372 |
504 | L>F | No |
ClinGen gnomAD |
|
|
CA3448480 rs782477747 |
505 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs782477747 CA361231381 |
505 | S>W | No |
ClinGen ExAC gnomAD |
|
|
CA361231390 rs1554132122 |
506 | S>T | No |
ClinGen gnomAD |
|
|
CA361231404 rs1282023154 |
507 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA361231399 rs1554132126 |
507 | Y>H | No |
ClinGen gnomAD |
|
|
rs750798150 CA361231410 |
508 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448483 rs548258006 |
508 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs750798150 CA3448482 |
508 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1429736622 CA361231424 |
509 | S>* | No |
ClinGen TOPMed |
|
|
CA361231425 rs1429736622 |
509 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA3448486 rs782297187 |
510 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448485 rs782297187 |
510 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361231452 rs138462086 |
512 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM736248 rs138462086 CA3448488 |
512 | A>T | lung Variant assessed as Somatic; 0.0002312 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs536607224 CA3448489 COSM1062048 |
512 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
COSM3946941 CA3448490 rs781938259 |
513 | E>D | lung [Cosmic] | No |
ClinGen cosmic curated ExAC |
|
rs1554132144 CA361231475 |
514 | S>G | No |
ClinGen gnomAD |
|
|
rs782140264 CA3448491 |
514 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs374284313 CA3448492 |
515 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361231485 rs374284313 |
515 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361231490 rs1175453531 |
515 | G>V | No |
ClinGen TOPMed |
|
|
rs782131350 CA3448494 |
517 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs781983175 CA3448493 |
517 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1554132149 CA361231518 |
518 | Y>H | No |
ClinGen gnomAD |
|
|
CA128349999 rs199727548 |
519 | A>S | No |
ClinGen gnomAD |
|
|
CA361231534 rs1554132154 |
519 | A>V | No |
ClinGen gnomAD |
|
|
CA3448496 rs781841292 |
520 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs782717642 COSM1542006 CA3448498 |
522 | P>Q | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361231556 rs1581885060 |
522 | P>S | No |
ClinGen Ensembl |
|
|
rs144129472 CA3448500 |
523 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1315863 rs782653124 CA3448501 |
526 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine haematopoietic_and_lymphoid_tissue [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361231622 rs1246503495 |
528 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs782200772 CA3448502 |
530 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA361231643 rs1554132158 |
530 | L>P | No |
ClinGen gnomAD |
|
|
CA361231651 rs1554132167 |
531 | L>P | No |
ClinGen gnomAD |
|
|
CA361231703 rs1262192253 |
535 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs61730774 CA3448507 |
536 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782403195 CA3448506 |
536 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs188962276 CA361231733 |
537 | A>P | No |
ClinGen gnomAD |
|
|
rs188962276 COSM1642630 CA128350058 |
537 | A>T | Variant assessed as Somatic; 0.0 impact. stomach [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1362946626 CA361231777 |
540 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA361231778 rs1362946626 |
540 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361231785 rs1554132175 |
540 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782105785 CA3448512 |
541 | G>D | No |
ClinGen ExAC gnomAD |
|
|
COSM1062052 CA3448513 rs553935345 |
542 | V>M | large_intestine endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA3448514 rs781943125 |
543 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782154984 CA3448515 |
544 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361231849 rs1388921761 |
546 | G>D | No |
ClinGen TOPMed |
|
|
CA3448517 rs781861013 |
546 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361231877 rs61730775 CA361231876 |
548 | N>K | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs782731310 CA3448519 |
549 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA361231881 rs572265742 CA3448518 |
549 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361231895 rs1554132200 |
550 | T>M | No |
ClinGen gnomAD |
|
|
rs782448600 CA3448521 |
552 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA361231913 rs1255016400 |
552 | Q>R | No |
ClinGen TOPMed |
|
| TCGA novel | 553 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361231922 rs1179697520 |
553 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361231919 rs1179697520 |
553 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs542715333 CA128350136 |
555 | V>A | No |
ClinGen 1000Genomes |
|
|
rs374448577 CA361231943 CA3448522 |
555 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554132217 CA361231959 |
557 | D>N | No |
ClinGen gnomAD |
|
|
CA361231971 rs561019835 COSM1433857 |
558 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA3448523 rs561019835 |
558 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361231993 rs576399974 |
559 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554132224 CA361231998 |
560 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361232020 rs1293917446 |
561 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs782657582 CA3448525 |
562 | A>E | No |
ClinGen ExAC gnomAD |
|
|
COSM1062054 rs1381710258 CA361232023 |
562 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs782207845 CA361232038 COSM1219594 |
563 | P>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA3448526 rs782207845 |
563 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554132239 CA361232044 |
564 | A>E | No |
ClinGen gnomAD |
|
|
rs1554132238 CA361232040 |
564 | A>T | No |
ClinGen gnomAD |
|
|
CA361232045 rs1554132239 |
564 | A>V | No |
ClinGen gnomAD |
|
|
CA3448529 rs782205074 |
566 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448530 rs782412294 |
567 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1369213842 CA361232076 |
568 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1369213842 CA361232075 |
568 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3448532 rs201762893 |
569 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1368212237 CA361232089 |
569 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361232087 rs1368212237 |
569 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA361232085 rs201762893 |
569 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554132255 CA361232099 |
570 | V>E | No |
ClinGen gnomAD |
|
|
CA3448533 rs782330450 |
570 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1554132256 CA361232101 |
571 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
COSM317829 CA361232119 rs1554132261 |
572 | G>V | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs139323547 CA3448535 |
573 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554132272 CA361232130 |
574 | G>S | No |
ClinGen gnomAD |
|
|
CA361232156 COSM331440 rs1554132278 |
576 | A>E | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA361232154 rs1581889667 |
576 | A>S | No |
ClinGen Ensembl |
|
|
CA361232168 rs1554132283 |
577 | V>A | No |
ClinGen gnomAD |
|
|
TCGA novel rs559588538 CA3448539 |
578 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC gnomAD NCI-TCGA |
|
rs782761804 CA3448540 |
579 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448541 rs782761804 |
579 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782761804 CA361232185 |
579 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1562311801 CA361232200 |
580 | L>P | No |
ClinGen Ensembl |
|
|
rs782481691 CA3448542 |
580 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782451071 CA3448545 |
582 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361232220 rs782451071 |
582 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781793166 CA3448544 |
582 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA361232227 rs782303592 |
583 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448547 rs782303592 |
583 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361232225 rs782303592 |
583 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3428979 rs782678878 CA3448546 |
583 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 584 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448549 rs60309716 |
585 | L>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782225294 CA3448550 |
585 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448548 rs60309716 VAR_061061 |
585 | L>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA361232247 rs1406013217 |
586 | G>A | No |
ClinGen TOPMed |
|
|
CA361232242 rs1581890662 |
586 | G>S | No |
ClinGen Ensembl |
|
|
rs782299315 CA3448551 |
587 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361232260 rs1562312098 |
587 | A>V | No |
ClinGen Ensembl |
|
| TCGA novel | 588 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782139352 CA3448553 |
588 | G>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 589 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781980127 CA3448555 |
589 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 590 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782132927 CA3448556 |
590 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782132927 CA361232277 |
590 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs180987045 CA3448560 |
592 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs180987045 CA3448559 |
592 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781889612 CA3448561 |
593 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs782569714 CA3448562 |
593 | K>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3448563 rs782640691 |
595 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA3448564 rs781879860 |
595 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361232310 rs781879860 |
595 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361232308 rs782640691 |
595 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA3448565 rs782481966 |
596 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA3448566 rs782481966 |
596 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1554132355 CA361232344 |
599 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3448569 rs200115025 |
599 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3448574 rs782311466 |
602 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448575 rs781935966 |
603 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA3448578 rs782806587 |
604 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1562312765 CA361232433 |
604 | N>I | No |
ClinGen Ensembl |
|
|
CA3448577 rs782806587 |
604 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1299883375 CA361232479 |
606 | W>C | No |
ClinGen TOPMed |
|
|
rs1331003253 CA361232462 |
606 | W>R | No |
ClinGen TOPMed |
|
|
rs1554132384 CA361232486 |
607 | L>F | No |
ClinGen gnomAD |
|
|
rs782449533 CA3448583 |
608 | S>W | No |
ClinGen ExAC gnomAD |
|
|
rs781897898 CA3448585 |
610 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375341640 CA361232544 |
611 | L>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA361232573 rs1554132400 |
613 | P>S | No |
ClinGen gnomAD |
|
|
CA361232594 rs1562313135 |
614 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| rs1554132405 | 614 | P>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361232601 rs1176512976 |
615 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361232598 rs1176512976 |
615 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3448589 rs782208772 |
616 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1375837368 CA361232622 |
616 | S>R | No |
ClinGen TOPMed |
|
|
rs1195178508 CA361232648 |
618 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1195178508 CA361232645 |
618 | A>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 618 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361232658 rs1554132419 |
619 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3448590 rs782487048 |
619 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554132421 CA361232665 |
620 | F>L | No |
ClinGen gnomAD |
|
|
COSM1737720 rs1206602805 CA361232702 |
623 | R>H | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1206602805 CA361232706 |
623 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3448594 rs782040393 |
624 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA361232713 rs782040393 |
624 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA3448596 rs138359227 |
625 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1254373487 CA361232768 |
628 | T>K | No |
ClinGen TOPMed |
|
|
rs368674974 CA3448601 |
629 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs868907141 CA361232792 |
630 | E>K | No |
ClinGen Ensembl |
|
|
CA3448603 rs782758390 |
633 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1554132448 CA361232867 |
635 | R>G | No |
ClinGen gnomAD |
|
| TCGA novel | 635 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361232875 rs1297305883 |
635 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs782463069 CA3448605 |
636 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA361232906 rs1554132452 |
638 | D>Y | No |
ClinGen gnomAD |
|
|
CA128350573 rs755165097 |
639 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1581894800 CA361232940 COSM1287005 |
640 | A>E | autonomic_ganglia [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA3448611 rs782508248 |
641 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs782671408 CA3448609 |
641 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448610 rs782671408 |
641 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782454436 CA3448608 |
641 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1062066 CA3448613 rs782217006 |
643 | P>L | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3448615 rs782587732 |
644 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554132466 CA361232982 |
645 | H>Y | No |
ClinGen gnomAD |
|
|
rs782267488 CA361232997 |
646 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448617 rs782418109 |
646 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782267488 CA3448616 |
646 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361233017 rs1243555382 |
647 | L>R | No |
ClinGen TOPMed |
|
|
CA361233026 rs1581895588 |
648 | L>P | No |
ClinGen Ensembl |
|
|
rs1581895552 CA361233023 |
648 | L>V | No |
ClinGen Ensembl |
|
|
rs1581895686 CA361233038 |
649 | V>G | No |
ClinGen Ensembl |
|
|
rs782343437 CA361233049 |
650 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs782343437 CA3448620 |
650 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1554132486 CA361233062 |
651 | V>G | No |
ClinGen gnomAD |
|
|
rs1188462695 CA361233077 |
652 | K>N | No |
ClinGen TOPMed |
|
|
rs781920580 CA361233082 |
653 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781920580 CA3448621 |
653 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1276520798 CA361233095 |
654 | H>Y | No |
ClinGen TOPMed |
|
|
CA3448623 rs782721177 |
655 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs868964813 CA361233114 |
656 | E>K | No |
ClinGen Ensembl |
|
|
rs781870658 CA3448624 |
657 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361233134 rs1554132505 COSM1433859 |
658 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs148379064 CA3448625 |
658 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA361233171 rs782807658 |
661 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448626 rs782807658 |
661 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782807658 CA361233173 |
661 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448628 rs782446908 COSM1130903 |
662 | T>M | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA361233216 rs1330292023 |
664 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
rs782303509 CA3448633 |
670 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA128350691 rs368789675 |
670 | V>M | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA3448635 rs150521839 |
672 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139450702 CA3448637 |
673 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361233340 rs1472585258 |
673 | G>S | No |
ClinGen TOPMed |
|
|
rs1581897342 CA361233378 |
674 | Q>H | No |
ClinGen Ensembl |
|
|
rs1184044703 CA361233386 |
675 | A>P | No |
ClinGen TOPMed |
|
|
rs1184044703 COSM1433861 CA361233383 |
675 | A>T | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs543846676 CA3448638 |
675 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs370760125 CA3448639 |
676 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361233405 rs1554132561 |
676 | P>S | No |
ClinGen gnomAD |
|
|
rs1554132561 CA361233410 |
676 | P>T | No |
ClinGen gnomAD |
|
| TCGA novel | 677 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1490985098 CA361233458 |
678 | A>E | No |
ClinGen TOPMed |
|
|
rs1554132564 CA361233479 |
679 | S>* | No |
ClinGen gnomAD |
|
|
CA3448643 rs782712367 |
680 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448646 rs116757950 COSM1433863 |
681 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA361234722 rs782778260 |
682 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782778260 CA3448647 |
682 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361234735 rs782549944 |
683 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs782549944 CA3448649 |
683 | S>W | No |
ClinGen ExAC gnomAD |
|
|
rs1406638033 CA361234760 |
685 | G>D | No |
ClinGen TOPMed |
|
|
CA3448653 rs782618791 |
688 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs529947844 CA128350811 |
688 | G>S | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA3448654 rs782618791 |
688 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs782624126 CA3448656 |
690 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361234879 rs1554132602 |
691 | A>S | No |
ClinGen gnomAD |
|
|
CA361234890 rs781932240 |
692 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781932240 CA3448659 |
692 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs144102346 CA3448660 |
692 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 694 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782009767 CA361235030 |
697 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371660211 CA3448663 CA361235031 |
697 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782009767 CA3448662 |
697 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782820560 CA3448664 |
699 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs781317992 CA128350893 |
701 | I>V | No |
ClinGen Ensembl |
|
|
rs782069293 CA3448667 |
702 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs782020483 CA3448666 |
702 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3448670 rs144997304 |
705 | C>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1224893185 CA361235245 |
706 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782777129 CA3448671 |
706 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3448673 rs782541790 |
707 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs781853468 CA3448672 |
707 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs782671161 CA3448674 |
708 | S>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs563443253 CA3448675 |
709 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361235337 rs1274237025 |
710 | L>Q | No |
ClinGen TOPMed |
|
|
rs782443824 CA361235335 |
710 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1346700283 CA361235415 |
713 | L>F | No |
ClinGen TOPMed |
|
|
rs374507619 CA128350952 |
713 | L>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA3448680 COSM1541998 rs782042680 |
714 | T>K | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3448686 rs782731827 |
719 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA361235577 rs1435019296 |
720 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361235584 rs1435019296 |
720 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs142209596 CA3448689 |
722 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 723 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448691 rs151257683 |
724 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554132677 CA361235640 |
724 | S>P | No |
ClinGen gnomAD |
|
|
CA3448690 rs151257683 |
724 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128351000 rs748242537 |
725 | A>T | No |
ClinGen Ensembl |
|
|
rs781834038 CA3448695 |
726 | P>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 726 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM403964 CA361235718 rs782645096 |
727 | P>H | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA3448697 rs782645096 |
727 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782590903 CA361235755 |
729 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1364001637 CA361235780 |
729 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA3448700 rs782590903 |
729 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3448702 rs782360166 |
730 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs782178677 CA3448701 |
730 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361235815 rs782360166 |
730 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs782258872 CA361235831 |
731 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554132701 CA361235827 |
731 | A>S | No |
ClinGen gnomAD |
|
|
rs782258872 CA3448704 |
731 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361235837 rs1554132709 |
732 | C>R | No |
ClinGen gnomAD |
|
|
CA361235840 rs1434180043 |
732 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361235839 rs1434180043 |
732 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA361235868 rs1554132712 |
733 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361235866 rs1554132712 |
733 | T>R | No |
ClinGen gnomAD |
|
|
rs782147005 CA3448707 COSM448765 |
734 | A>V | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361235957 rs1359749137 |
736 | K>E | No |
ClinGen TOPMed |
|
|
CA3448710 rs782089682 |
738 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782089682 CA361236020 |
738 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361236033 rs1392646393 |
739 | L>V | No |
ClinGen TOPMed |
|
|
CA361236052 rs1554132724 |
740 | V>L | No |
ClinGen gnomAD |
|
| TCGA novel | 740 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs369064445 CA3448713 |
743 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361236170 rs781812258 |
744 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA3448716 COSM283803 rs781812258 |
744 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1554132736 CA361236210 |
746 | G>R | No |
ClinGen gnomAD |
|
| TCGA novel | 747 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1236321619 CA361236304 |
748 | W>C | No |
ClinGen TOPMed |
|
|
rs1207479341 CA361236320 |
749 | S>A | No |
ClinGen TOPMed |
|
|
rs1309181555 CA361236333 |
749 | S>L | No |
ClinGen TOPMed |
|
| TCGA novel | 749 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361236349 rs1554132759 |
750 | Y>C | No |
ClinGen gnomAD |
|
|
CA361236367 rs1554132762 |
751 | S>* | No |
ClinGen gnomAD |
|
|
CA361236381 rs1554132762 |
751 | S>L | No |
ClinGen gnomAD |
|
|
rs1275311628 CA361236387 |
752 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3448720 rs373021109 |
755 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361236501 rs373021109 |
755 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128351184 rs756045866 |
755 | R>W | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 756 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361236537 rs147693617 |
757 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs147693617 CA3448721 |
757 | R>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs147693617 CA3448722 |
757 | R>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448723 rs782288600 |
758 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA3448724 rs782407463 |
760 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782181126 CA3448726 |
761 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1372928011 CA361236646 |
762 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1554132798 CA361236663 |
762 | E>D | No |
ClinGen gnomAD |
|
|
rs781946504 CA3448728 |
763 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
CA3448729 rs782121371 |
765 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs1169733601 CA361236717 |
765 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361236721 rs1169733601 |
765 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3448730 rs138889909 |
766 | K>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554132804 CA361236750 |
767 | M>I | No |
ClinGen gnomAD |
|
|
CA361236736 rs1554132803 |
767 | M>L | No |
ClinGen gnomAD |
|
|
CA361236733 rs1554132803 |
767 | M>V | No |
ClinGen gnomAD |
|
|
CA361236764 rs1388629889 |
768 | D>Y | No |
ClinGen TOPMed |
|
|
rs782073264 CA3448732 |
770 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs782706530 CA3448733 |
770 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448734 rs142523844 |
771 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 773 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554132809 CA361236895 |
773 | S>T | No |
ClinGen gnomAD |
|
|
CA361236932 rs1554132810 |
774 | P>R | No |
ClinGen gnomAD |
|
|
CA3448735 rs367558833 |
775 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782793834 CA3448736 |
778 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781855157 CA3448737 |
779 | C>G | No |
ClinGen ExAC gnomAD |
|
|
CA361237052 rs1483777919 |
780 | P>L | No |
ClinGen TOPMed |
|
|
rs1554132820 CA361237047 |
780 | P>S | No |
ClinGen gnomAD |
|
|
rs1554132822 CA361237083 |
782 | M>I | No |
ClinGen gnomAD |
|
|
rs782562426 CA3448738 |
782 | M>K | No |
ClinGen ExAC gnomAD |
|
|
CA361237080 rs782562426 |
782 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1251933211 CA361237118 |
784 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1251933211 CA361237114 |
784 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1204273362 CA361237136 |
785 | K>E | No |
ClinGen TOPMed |
|
|
CA3448739 rs577322809 |
786 | A>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs150956127 CA3448740 |
786 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361237176 rs553330579 |
787 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3448742 rs553330579 |
787 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1554132838 CA361237230 |
790 | D>Y | No |
ClinGen gnomAD |
|
|
rs782211444 CA3448743 |
791 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs782514627 CA3448744 |
793 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs782635414 CA361237302 CA361237304 |
794 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs782281615 CA3448746 |
795 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782333039 CA3448747 |
796 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA3448748 rs781924866 |
797 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs782073950 CA3454452 |
799 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA361259520 rs1490306705 |
799 | P>S | No |
ClinGen TOPMed |
|
|
rs374951627 CA3454453 |
800 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781913955 CA3454454 |
800 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA3454455 rs781913955 |
800 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782109224 CA3454458 |
805 | D>H | No |
ClinGen ExAC |
|
|
COSM3696815 COSM3696819 COSM3696826 COSM3696817 CA3454459 COSM3696814 COSM3696822 COSM3696816 COSM3696828 COSM3696812 COSM3696820 rs782774245 COSM3696813 COSM3696823 COSM3696825 COSM3696821 COSM3696827 COSM3696818 COSM3696824 |
806 | W>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361259640 rs782774245 |
806 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA3454460 rs141879545 |
807 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454463 rs781815387 |
810 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138901709 CA3454464 |
811 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782686641 CA3454465 |
812 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1363421000 CA361259736 |
813 | R>I | No |
ClinGen TOPMed |
|
|
rs1586790986 CA361259751 |
814 | A>G | No |
ClinGen Ensembl |
|
|
CA3454466 rs782253140 |
815 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454467 rs782336746 |
816 | M>V | No |
ClinGen ExAC |
|
|
CA361259787 rs1554240128 |
817 | H>N | No |
ClinGen gnomAD |
|
|
rs149397164 CA3454468 |
818 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782426631 CA3454484 |
819 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782587733 CA3454485 |
819 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs782426631 CA361260538 |
819 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1181664726 CA361260559 |
820 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361260577 rs1554244276 |
821 | H>P | No |
ClinGen gnomAD |
|
|
COSM1062442 COSM1062448 COSM1062450 rs782273708 COSM1062445 COSM1062454 COSM1062455 COSM1062443 COSM1062452 COSM1062456 COSM1062457 COSM1062451 COSM1062453 COSM1062449 COSM1062447 CA3454486 COSM1062444 |
821 | H>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3454488 rs782634646 |
823 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454487 rs782419098 |
823 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs147537783 CA3454489 |
824 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs981642614 CA128362369 |
825 | A>T | No |
ClinGen Ensembl |
|
|
rs782347331 CA3454490 |
826 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260711 rs1468199443 |
827 | I>V | No |
ClinGen TOPMed |
|
|
rs555523473 CA3454493 |
829 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139355257 CA3454492 |
829 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782025005 CA3454494 |
831 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260802 rs1278779763 |
832 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3454495 rs201991205 |
834 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454497 rs201572428 |
836 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3454496 rs782766562 |
836 | D>V | No |
ClinGen ExAC |
|
|
rs1554244431 CA361260933 |
838 | Q>R | No |
ClinGen gnomAD |
|
|
CA3454498 rs782094765 |
839 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454499 RCV000950135 rs79247475 |
840 | P>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA128362405 rs369053351 |
840 | P>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1554244455 CA361260996 |
841 | T>A | No |
ClinGen gnomAD |
|
|
CA3454501 rs782544627 |
842 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454502 rs577838197 |
844 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454504 rs781852534 |
844 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs781852534 CA3454503 |
844 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs782605920 CA3454505 |
844 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs199851685 CA3454506 |
846 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454507 rs782437404 |
847 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs560422677 CA3454508 |
847 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs560422677 CA3454509 |
847 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361261129 rs782437404 |
847 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782179145 CA3454531 |
848 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454532 rs782321757 |
851 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554262240 CA361268348 |
853 | E>G | No |
ClinGen gnomAD |
|
|
rs781996586 CA3454536 |
859 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1179266 rs782079089 COSM1179264 COSM1179272 COSM1179273 COSM1179269 COSM1179270 COSM1179277 COSM1179268 COSM1179263 COSM1179271 COSM1179278 COSM1179275 COSM1179276 COSM1179265 CA3454537 COSM1179267 COSM1179274 |
860 | A>V | lung prostate [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1588246273 CA361268557 |
862 | V>G | No |
ClinGen Ensembl |
|
|
CA3454540 rs782068657 |
862 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1563727066 CA361268679 |
866 | S>N | No |
ClinGen Ensembl |
|
|
COSM139598 COSM139601 COSM139604 COSM139606 COSM139609 COSM139603 COSM139600 COSM139611 COSM139608 rs1554262287 COSM139599 COSM139607 COSM139602 COSM139605 COSM139610 CA361268865 |
872 | G>E | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs900919931 CA128372514 |
872 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1554262289 CA361268920 |
874 | G>D | No |
ClinGen gnomAD |
|
|
CA3454542 rs575518914 |
876 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175529844 CA361268995 |
877 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3454543 rs782119637 |
879 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454546 rs552954748 |
880 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552954748 CA3454545 |
880 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs373683237 CA3454547 |
881 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1486746921 CA361269173 |
882 | G>S | No |
ClinGen TOPMed |
|
|
CA128372547 rs1057913 |
886 | D>A | No |
ClinGen Ensembl |
|
|
rs371269236 CA3454551 |
886 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454552 rs782334415 |
887 | K>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454553 rs782623559 |
890 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3454555 rs782328874 |
891 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454556 rs200822345 |
892 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454559 rs782009776 |
896 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142720081 CA361269729 |
896 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3454558 rs142720081 |
896 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782087059 CA3454560 |
897 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1289763016 CA361269834 |
899 | I>V | No |
ClinGen TOPMed |
|
|
rs760426957 CA3454562 |
900 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1166265 COSM1166271 COSM1166266 COSM1166268 COSM1166267 COSM1166273 COSM1166276 COSM1166277 COSM1166272 COSM1166264 COSM1166279 rs147351924 CA3454561 COSM1166275 COSM1166269 COSM1166278 COSM1166270 COSM1166274 |
900 | R>W | large_intestine haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA361269875 rs1554262408 |
901 | Q>K | No |
ClinGen gnomAD |
|
|
CA361269953 rs1554262420 |
903 | P>A | No |
ClinGen gnomAD |
|
|
CA361269962 rs1359138927 |
903 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1314860754 CA361269972 |
904 | T>A | No |
ClinGen TOPMed |
|
|
CA361270002 rs1554262437 |
905 | N>K | No |
ClinGen TOPMed |
|
|
CA3454564 rs148436868 |
906 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554262456 CA361270119 |
908 | I>T | No |
ClinGen gnomAD |
|
|
rs781853535 CA3454565 |
908 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529364872 CA128372646 |
909 | D>E | No |
ClinGen Ensembl |
|
|
CA3454567 rs142570778 |
909 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128372638 rs782057926 |
909 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3454568 rs781835321 |
910 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs782451974 CA3454569 |
913 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3454570 rs782578873 |
915 | T>I | No |
ClinGen ExAC |
|
|
rs782274123 CA3454571 |
916 | F>S | No |
ClinGen ExAC gnomAD |
|
|
COSM216699 COSM216705 CA3454573 COSM216710 rs782642898 COSM1158471 COSM216696 COSM216700 COSM216702 COSM216709 COSM216704 COSM216698 COSM216697 COSM216706 COSM216707 COSM216701 COSM216703 COSM216708 |
917 | G>S | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454574 rs782270689 |
919 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs782270689 CA361270554 |
919 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1259591783 CA361270565 |
920 | E>Q | No |
ClinGen TOPMed |
|
|
CA361270593 rs1554262487 |
921 | E>D | No |
ClinGen gnomAD |
|
|
CA3454575 rs782348993 |
922 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs781972089 CA3454577 |
923 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554262492 CA361270633 |
923 | K>R | No |
ClinGen gnomAD |
|
|
rs374660085 CA3454578 |
928 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361270828 rs1554262513 |
929 | K>R | No |
ClinGen gnomAD |
|
|
CA3454579 rs782413551 |
930 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782413551 CA361270853 |
930 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307653192 CA361270984 |
933 | K>N | No |
ClinGen TOPMed |
|
|
CA128372721 rs184181976 |
933 | K>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
rs1554262529 CA361271070 |
936 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782776948 CA3454583 |
938 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3454584 rs781954349 |
941 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361271296 rs1295693430 |
942 | N>D | No |
ClinGen TOPMed |
|
|
rs1554262551 CA361271322 |
942 | N>K | No |
ClinGen gnomAD |
|
|
CA361271306 rs1415929182 |
942 | N>S | No |
ClinGen TOPMed |
|
|
CA128372734 rs958247947 |
943 | S>G | No |
ClinGen Ensembl |
|
|
CA128372735 rs17855798 |
943 | S>N | No |
ClinGen Ensembl |
|
|
COSM1434122 COSM1434119 CA3454585 COSM1434134 COSM1434133 COSM1434130 COSM1434131 COSM1434125 COSM1434126 COSM1434124 COSM1434127 COSM1434129 COSM1434121 COSM1434120 COSM1434123 rs199928168 COSM1434128 COSM1434132 |
944 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA361271405 rs1301104421 |
945 | T>A | No |
ClinGen TOPMed |
|
|
CA361271440 rs1554262572 |
946 | D>E | No |
ClinGen gnomAD |
|
|
CA361271462 rs1463725058 |
947 | N>Y | No |
ClinGen TOPMed |
No associated diseases with Q9UN73
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| extracellular region | The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. |
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium ion binding | Binding to a calcium ion (Ca2+). |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cell adhesion | The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
| homophilic cell adhesion via plasma membrane adhesion molecules | The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell. |
| nervous system development | The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. |
45 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q3SWX5 | CDH6 | Cadherin-6 | Bos taurus (Bovine) | PR |
| P79995 | CDH10 | Cadherin-10 | Gallus gallus (Chicken) | PR |
| Q8UVJ7 | CDHR1 | Cadherin-related family member 1 | Gallus gallus (Chicken) | PR |
| Q5DRC8 | PCDHB6 | Protocadherin beta-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF0 | PCDHA2 | Protocadherin alpha-2 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE7 | PCDHA5 | Protocadherin alpha-5 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE4 | PCDHA8 | Protocadherin alpha-8 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE6 | PCDHA6 | Protocadherin alpha-6 | Pan troglodytes (Chimpanzee) | PR |
| Q9VJB6 | CadN2 | Putative neural-cadherin 2 | Drosophila melanogaster (Fruit fly) | PR |
| Q9ULB4 | CDH9 | Cadherin-9 | Homo sapiens (Human) | PR |
| P12830 | CDH1 | Cadherin-1 | Homo sapiens (Human) | PR |
| Q9H159 | CDH19 | Cadherin-19 | Homo sapiens (Human) | PR |
| Q9Y6N8 | CDH10 | Cadherin-10 | Homo sapiens (Human) | PR |
| P55285 | CDH6 | Cadherin-6 | Homo sapiens (Human) | PR |
| P19022 | CDH2 | Cadherin-2 | Homo sapiens (Human) | PR |
| Q6ZTQ4 | CDHR3 | Cadherin-related family member 3 | Homo sapiens (Human) | PR |
| Q9BZA8 | PCDH11Y | Protocadherin-11 Y-linked | Homo sapiens (Human) | PR |
| Q08174 | PCDH1 | Protocadherin-1 | Homo sapiens (Human) | PR |
| Q9HC56 | PCDH9 | Protocadherin-9 | Homo sapiens (Human) | PR |
| Q9P2E7 | PCDH10 | Protocadherin-10 | Homo sapiens (Human) | PR |
| Q9Y5H8 | PCDHA3 | Protocadherin alpha-3 | Homo sapiens (Human) | PR |
| Q9UN75 | PCDHA12 | Protocadherin alpha-12 | Homo sapiens (Human) | PR |
| Q9Y5I2 | PCDHA10 | Protocadherin alpha-10 | Homo sapiens (Human) | PR |
| Q9UN72 | PCDHA7 | Protocadherin alpha-7 | Homo sapiens (Human) | PR |
| Q9UN74 | PCDHA4 | Protocadherin alpha-4 | Homo sapiens (Human) | PR |
| Q9Y5I1 | PCDHA11 | Protocadherin alpha-11 | Homo sapiens (Human) | PR |
| Q9Y5H7 | PCDHA5 | Protocadherin alpha-5 | Homo sapiens (Human) | PR |
| Q9Y5H6 | PCDHA8 | Protocadherin alpha-8 | Homo sapiens (Human) | PR |
| Q9Y5I3 | PCDHA1 | Protocadherin alpha-1 | Homo sapiens (Human) | PR |
| Q9Y5H9 | PCDHA2 | Protocadherin alpha-2 | Homo sapiens (Human) | PR |
| Q9Y5H3 | PCDHGA10 | Protocadherin gamma-A10 | Homo sapiens (Human) | PR |
| O60330 | PCDHGA12 | Protocadherin gamma-A12 | Homo sapiens (Human) | PR |
| Q9Y5G4 | PCDHGA9 | Protocadherin gamma-A9 | Homo sapiens (Human) | PR |
| Q9Y5G0 | PCDHGB5 | Protocadherin gamma-B5 | Homo sapiens (Human) | PR |
| Q9Y5E3 | PCDHB6 | Protocadherin beta-6 | Homo sapiens (Human) | PR |
| Q9Y5F1 | PCDHB12 | Protocadherin beta-12 | Homo sapiens (Human) | PR |
| P09803 | Cdh1 | Cadherin-1 | Mus musculus (Mouse) | PR |
| P15116 | Cdh2 | Cadherin-2 | Mus musculus (Mouse) | PR |
| P70407 | Cdh9 | Cadherin-9 | Mus musculus (Mouse) | PR |
| P97326 | Cdh6 | Cadherin-6 | Mus musculus (Mouse) | PR |
| P70408 | Cdh10 | Cadherin-10 | Mus musculus (Mouse) | PR |
| Q8VHF2 | Cdhr5 | Cadherin-related family member 5 | Mus musculus (Mouse) | PR |
| P55280 | Cdh6 | Cadherin-6 | Rattus norvegicus (Rat) | PR |
| Q9Z1Y3 | Cdh2 | Cadherin-2 | Rattus norvegicus (Rat) | PR |
| Q767I8 | Pcdha4 | Protocadherin alpha-4 | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MVFTPEDRLG | KQCLLLPLLL | LAAWKVGSGQ | LHYSVPEEAK | HGTFVGRIAQ | DLGLELAELV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PRLFRMASKD | REDLLEVNLQ | NGILFVNSRI | DREELCGRSA | ECSIHLEVIV | DRPLQVFHVD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VEVRDINDNP | PLFPVEEQRV | LIYESRLPDS | VFPLEGASDA | DVGSNSILTY | KLSSSEYFGL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DVKINSDDNK | QIGLLLKKSL | DREEAPAHNL | FLTATDGGKP | ELTGTVQLLV | TVLDVNDNAP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TFEQSEYEVR | IFENADNGTT | VIRLNASDRD | EGANGAISYS | FNSLVAAMVI | DHFSIDRNTG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EIVIRGNLDF | EQENLYKILI | DATDKGHPPM | AGHCTVLVRI | LDKNDNVPEI | ALTSLSLPVR |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EDAQFGTVIA | LISVNDLDSG | ANGQVNCSLT | PHVPFKLVST | FKNYYSLVLD | SALDRESVSA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YELVVTARDG | GSPSLWATAS | LSVEVADMND | NAPAFAQPEY | TVFVKENNPP | GCHIFTVSAR |
| 490 | 500 | 510 | 520 | 530 | 540 |
| DADAQENALV | SYSLVERRVG | ERALSSYISV | HAESGKVYAL | QPLDHEELEL | LQFQVSARDA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GVPPLGSNVT | LQVFVLDEND | NAPALLAPRV | GGTGGAVSEL | VPRSLGAGQV | VAKVRAVDAD |
| 610 | 620 | 630 | 640 | 650 | 660 |
| SGYNAWLSYE | LQPPASSARF | PFRVGLYTGE | ISTTRVLDEA | DSPRHRLLVL | VKDHGEPALT |
| 670 | 680 | 690 | 700 | 710 | 720 |
| ATATVLVSLV | ESGQAPKASS | RASVGAAGPE | AALVDVNVYL | IIAICAVSSL | LVLTLLLYTA |
| 730 | 740 | 750 | 760 | 770 | 780 |
| LRCSAPPTEG | ACTADKPTLV | CSSAVGSWSY | SQQRRQRVCS | GEGPPKMDLM | AFSPSLSPCP |
| 790 | 800 | 810 | 820 | 830 | 840 |
| IMMGKAENQD | LNEDHDAKPR | QPNPDWRYSA | SLRAGMHSSV | HLEEAGILRA | GPGGPDQQWP |
| 850 | 860 | 870 | 880 | 890 | 900 |
| TVSSATPEPE | AGEVSPPVGA | GVNSNSWTFK | YGPGNPKQSG | PGELPDKFII | PGSPAIISIR |
| 910 | 920 | 930 | 940 | ||
| QEPTNSQIDK | SDFITFGKKE | ETKKKKKKKK | GNKTQEKKEK | GNSTTDNSDQ |