Q9Y5H9
Gene name |
PCDHA2 |
Protein name |
Protocadherin alpha-2 |
Names |
PCDH-alpha-2 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:56146 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9Y5H9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9Y5H9-F1 | Predicted | AlphaFoldDB |
1014 variants for Q9Y5H9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000508600 CA3454461 rs150254638 |
805 | R>H | Hirschsprung disease, susceptibility to, 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA361230307 rs1554119211 |
3 | S>Y | No |
ClinGen gnomAD |
|
|
CA128365092 rs374405792 |
4 | S>F | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA3445530 rs555371032 |
5 | I>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1395231181 CA361230341 |
5 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA3445531 rs782158371 |
5 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA3445529 rs555371032 |
5 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782791166 CA361230391 |
7 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA361230399 rs1554119216 |
8 | G>D | No |
ClinGen gnomAD |
|
|
rs1452561536 CA361230412 |
9 | R>L | No |
ClinGen TOPMed |
|
|
CA3445533 rs781865981 |
11 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
TCGA novel CA361230432 rs1581611821 |
11 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
|
CA361230453 rs781865981 |
11 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445534 rs368471539 |
12 | W>* | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1554119218 CA361230475 |
13 | T>A | No |
ClinGen gnomAD |
|
|
CA128365113 rs782163848 |
14 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782163848 CA3445536 |
14 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361230524 rs782163848 |
14 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781937670 CA128365108 |
14 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs371887838 CA3445537 |
16 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781893367 CA3445539 |
17 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361230613 rs781893367 |
17 | S>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361230633 rs1554119224 |
18 | L>P | No |
ClinGen gnomAD |
|
|
CA3445540 rs573551999 |
21 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361230729 rs1562150190 |
24 | W>* | No |
ClinGen Ensembl |
|
|
CA3445542 rs201493367 |
24 | W>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1281191089 CA361230725 |
24 | W>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA361230734 rs9686540 |
25 | E>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs9686540 CA3445543 VAR_059179 |
25 | E>K | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA361230732 rs9686540 |
25 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3445544 CA3445546 rs369107883 |
26 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3445545 rs369107883 |
26 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361230759 rs1300209459 |
27 | G>A | No |
ClinGen TOPMed |
|
| TCGA novel | 27 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3445547 rs782012270 |
28 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA3445548 rs782259873 |
29 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782370691 CA3445549 |
30 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA3445550 rs781966168 |
30 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA128365166 rs980216213 |
31 | L>I | No |
ClinGen Ensembl |
|
|
CA128365175 rs1033929121 |
32 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs563648142 CA3445551 |
32 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs563648142 CA128365179 |
32 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782698365 CA3445552 |
33 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs992440711 CA361230857 |
34 | S>A | No |
ClinGen TOPMed gnomAD |
|
|
CA128365184 rs992440711 |
34 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
CA361230923 rs1375501923 |
36 | P>R | No |
ClinGen TOPMed |
|
|
rs782797910 CA3445555 |
36 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782489216 CA361230932 |
37 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs782489216 CA3445557 |
37 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 39 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 39 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1562150572 CA361231025 |
40 | K>N | No |
ClinGen Ensembl |
|
|
rs1554119247 CA361231050 |
41 | H>Y | No |
ClinGen gnomAD |
|
|
CA3445559 rs149618945 |
42 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs149618945 CA361231066 |
42 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs149618945 CA3445558 |
42 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361231204 rs1554119258 |
47 | R>P | No |
ClinGen gnomAD |
|
|
CA3445564 rs782637404 |
48 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781929657 CA3445567 |
49 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA3445566 rs374233673 |
49 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361231289 rs1554119265 |
50 | Q>* | No |
ClinGen gnomAD |
|
|
CA361231314 rs1210282107 |
51 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782117441 CA3445572 |
53 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs782117441 CA3445573 |
53 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA3445574 rs781951515 |
54 | L>P | No |
ClinGen ExAC |
|
|
CA3445575 rs782068523 |
56 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445576 rs782699751 |
56 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148377577 CA3445577 |
57 | E>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs377636774 CA3445578 |
58 | E>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA128365266 rs1050159776 |
61 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361231474 rs1050159776 |
61 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA3445579 rs782789633 |
64 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1554119276 CA361231513 |
64 | F>S | No |
ClinGen gnomAD |
|
|
CA361231527 rs1554119278 |
65 | R>Q | No |
ClinGen gnomAD |
|
|
CA3445580 rs781848883 |
66 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs111485070 CA3445581 |
67 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361231561 rs1562151087 |
68 | S>P | No |
ClinGen Ensembl |
|
|
rs1292084700 CA361231575 |
69 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1412386680 CA361231581 |
69 | K>R | No |
ClinGen TOPMed |
|
|
rs1554119283 CA361231594 |
70 | R>G | No |
ClinGen gnomAD |
|
|
rs1554119284 CA361231604 |
70 | R>S | No |
ClinGen gnomAD |
|
|
rs782193156 CA3445583 |
70 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA361231619 rs1554119289 |
71 | H>R | No |
ClinGen gnomAD |
|
|
rs782561212 CA3445584 |
71 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs200571163 CA3445586 CA3445587 |
72 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445588 rs200571163 |
72 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1581612901 CA361231657 |
73 | D>E | No |
ClinGen Ensembl |
|
|
CA361231653 rs1554119295 |
73 | D>G | No |
ClinGen gnomAD |
|
|
CA3445589 rs782211568 |
73 | D>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 76 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 77 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361231720 rs1461461674 |
78 | N>K | No |
ClinGen TOPMed |
|
|
rs782326871 CA3445590 |
79 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781923854 CA3445591 |
80 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA361231762 rs1554119297 |
81 | N>K | No |
ClinGen gnomAD |
|
|
CA3445592 rs199539947 |
82 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361231770 rs1554119299 |
83 | I>V | No |
ClinGen gnomAD |
|
|
rs995364036 CA128365350 |
84 | L>F | No |
ClinGen Ensembl |
|
|
rs782405254 CA3445593 |
84 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs200649333 CA3445595 |
86 | V>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3445598 rs145951382 |
89 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs145951382 CA3445597 |
89 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1433698 COSM1433699 CA3445596 rs145951382 |
89 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554119311 COSM273083 CA361231845 COSM273084 |
89 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs781896269 CA3445600 |
92 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA128365421 rs1035739838 |
93 | E>D | No |
ClinGen TOPMed |
|
|
CA3445602 rs782640497 |
96 | C>* | No |
ClinGen ExAC gnomAD |
|
|
rs1334999466 CA361231952 |
96 | C>G | No |
ClinGen TOPMed |
|
|
rs139811211 CA361231970 |
97 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361231979 rs1554119334 |
97 | G>V | No |
ClinGen gnomAD |
|
|
CA3445603 rs139811211 |
97 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361231996 rs1554119335 |
99 | S>G | No |
ClinGen gnomAD |
|
|
rs1307136021 CA361232007 CA361232010 |
99 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA128365427 rs376518025 |
100 | A>G | No |
ClinGen ESP |
|
|
rs782485600 COSM205036 CA3445604 COSM205037 |
101 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361232066 rs1461774717 |
103 | S>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA361232070 rs1393544461 |
103 | S>N | No |
ClinGen TOPMed |
|
| TCGA novel | 105 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3445608 VAR_024389 CA128365462 rs11167600 |
106 | V>L | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA361232118 rs11167600 |
106 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 107 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361232174 rs1554119350 |
109 | I>M | No |
ClinGen gnomAD |
|
|
CA361232184 rs1460117742 |
110 | V>A | No |
ClinGen TOPMed |
|
|
CA3445610 rs782371929 |
113 | P>L | No |
ClinGen ExAC gnomAD |
|
|
COSM1619581 COSM1619580 CA3445609 rs7727472 |
113 | P>T | liver [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3445612 rs17844245 |
116 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361232268 rs1581613636 |
116 | V>G | No |
ClinGen Ensembl |
|
|
rs782318515 CA3445613 |
118 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3445614 rs555159922 |
119 | V>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782451559 CA128366805 |
120 | E>A | No |
ClinGen Ensembl |
|
|
rs782786984 CA3445616 |
120 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782151526 CA3445615 |
120 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs782107919 CA3445619 |
121 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782107919 CA3445618 |
121 | V>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782107919 CA361234318 |
121 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782432943 CA3445621 |
122 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA361234321 rs1211398216 |
122 | E>K | No |
ClinGen TOPMed |
|
|
rs370073139 CA3445623 |
123 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370073139 CA361234351 |
123 | V>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782690809 CA3445622 |
123 | V>M | No |
ClinGen ExAC |
|
|
rs1260753639 CA361234358 |
124 | K>T | No |
ClinGen TOPMed |
|
|
rs1036932666 CA128366840 |
125 | D>A | No |
ClinGen Ensembl |
|
|
CA361234372 rs1237719977 |
125 | D>N | No |
ClinGen TOPMed |
|
|
CA3445625 rs373905526 |
126 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs563548858 CA3445626 |
127 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361234453 rs1554119383 |
128 | D>H | No |
ClinGen gnomAD |
|
|
CA361234468 rs1554119384 |
129 | N>H | No |
ClinGen gnomAD |
|
|
CA3445627 rs782462805 |
129 | N>T | No |
ClinGen ExAC gnomAD |
|
|
rs1554119389 CA361234502 |
130 | P>L | No |
ClinGen gnomAD |
|
|
CA3445628 rs782581026 |
130 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA128366853 rs781909912 |
131 | P>L | No |
ClinGen Ensembl |
|
|
CA361234529 rs1554119393 |
132 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 134 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3445630 rs782409736 |
135 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs782169407 CA3445629 |
135 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361234629 rs1581613955 |
136 | T>I | No |
ClinGen Ensembl |
|
|
rs1554119405 CA361234665 |
138 | K>* | No |
ClinGen gnomAD |
|
|
CA3445632 rs149936360 |
138 | K>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA128366897 rs905713066 |
139 | T>A | No |
ClinGen Ensembl |
|
|
CA361234724 rs1387448123 |
140 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3445634 rs144974749 |
140 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361234728 rs1159165318 |
140 | I>N | No |
ClinGen TOPMed |
|
|
CA361234738 rs149113769 |
141 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361234748 rs1056911639 |
141 | R>L | No |
ClinGen gnomAD |
|
|
CA128366945 rs1056911639 |
141 | R>P | No |
ClinGen gnomAD |
|
|
COSM1433702 rs149113769 CA3445635 COSM1433703 |
141 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1562152745 CA361234786 |
143 | P>A | No |
ClinGen Ensembl |
|
|
rs1562152745 CA361234788 |
143 | P>S | No |
ClinGen Ensembl |
|
|
CA3445636 rs376858335 |
145 | S>P | No |
ClinGen ESP ExAC gnomAD |
|
|
CA3445637 rs782032451 |
146 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs782143326 CA3445638 |
146 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs1176048892 CA361234999 |
149 | D>H | No |
ClinGen TOPMed |
|
|
rs782770242 CA3445639 |
151 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs782485078 CA361235121 |
153 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445641 rs782485078 |
153 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1455113035 CA361235113 |
153 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA3445642 rs782726612 |
154 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs895450115 COSM246422 COSM246421 CA128367031 |
156 | G>A | prostate [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1448312261 CA361235203 |
156 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361235242 rs1204251314 |
157 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361235269 rs1347907784 |
158 | S>Y | No |
ClinGen TOPMed |
|
|
CA361235296 rs1581614405 |
159 | D>V | No |
ClinGen Ensembl |
|
|
CA361235279 rs1581614390 |
159 | D>Y | No |
ClinGen Ensembl |
|
|
rs1554119441 CA361235366 |
161 | D>V | No |
ClinGen gnomAD |
|
|
rs782265276 CA3445646 |
162 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA3445645 rs782684873 COSM4141448 COSM4141449 |
162 | I>T | ovary [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA3445644 rs369830742 |
162 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782614505 CA3445648 |
167 | L>P | No |
ClinGen ExAC |
|
|
CA361235556 rs1347105213 |
168 | L>F | No |
ClinGen TOPMed |
|
|
CA361235606 rs1300927471 |
169 | S>Y | No |
ClinGen TOPMed |
|
|
CA361235701 rs1554119451 |
172 | L>F | No |
ClinGen gnomAD |
|
|
rs139118636 CA3445650 |
173 | S>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs868933408 CA361235800 |
176 | E>K | No |
ClinGen Ensembl |
|
|
rs1554119455 CA361235813 |
176 | E>V | No |
ClinGen gnomAD |
|
|
rs370399359 CA3445653 |
177 | F>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 180 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3445655 rs782001303 |
180 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361235949 rs1381910879 |
180 | L>V | No |
ClinGen TOPMed |
|
|
rs1314870723 CA361235956 |
181 | D>H | No |
ClinGen TOPMed |
|
|
CA3445656 rs147884726 |
181 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs954251616 CA128367100 |
182 | I>T | No |
ClinGen TOPMed |
|
|
CA361236048 rs1172088574 |
183 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA3445657 rs782757150 |
183 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM736365 rs781948718 COSM736364 CA3445658 |
187 | E>K | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1191999801 CA361236236 |
189 | S>G | No |
ClinGen TOPMed |
|
|
rs141531617 CA3445659 |
189 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554119476 CA361236291 |
190 | E>D | No |
ClinGen gnomAD |
|
|
rs1211012321 CA361236322 |
191 | S>F | No |
ClinGen TOPMed |
|
|
rs1554119483 CA361236363 |
192 | L>F | No |
ClinGen gnomAD |
|
|
rs1562153588 CA361236323 |
192 | L>M | No |
ClinGen Ensembl |
|
|
CA361236372 rs1554119485 |
193 | S>P | No |
ClinGen gnomAD |
|
|
rs782761856 CA3445663 |
196 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1197539931 CA361236522 |
199 | S>* | No |
ClinGen TOPMed |
|
|
rs1554119491 CA361236519 |
199 | S>A | No |
ClinGen Ensembl |
|
|
CA3445664 rs781846496 |
200 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 202 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3445665 rs190108115 |
203 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1338741055 CA361236711 |
204 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA361236714 rs1338741055 |
204 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
rs931193949 CA128367146 |
206 | A>D | No |
ClinGen Ensembl |
|
|
rs1554119499 CA361236852 |
207 | E>G | No |
ClinGen gnomAD |
|
|
CA361236870 rs1554119502 |
208 | V>F | No |
ClinGen gnomAD |
|
|
rs201598508 CA128367152 |
209 | N>D | No |
ClinGen ESP gnomAD |
|
|
rs144006982 CA3445667 |
209 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554119506 CA361236986 |
210 | L>F | No |
ClinGen gnomAD |
|
|
CA361237001 rs1562153969 |
211 | L>* | No |
ClinGen Ensembl |
|
|
rs782557173 CA3445669 |
212 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs782378293 CA3445672 |
217 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782378293 CA361237180 |
217 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361237257 rs1554119509 |
220 | P>H | No |
ClinGen Ensembl |
|
|
CA361237307 rs1554119510 |
223 | T>R | No |
ClinGen gnomAD |
|
|
CA3445674 rs782208465 |
224 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361237344 rs1167729742 |
226 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA361237373 rs1474196647 |
227 | Q>H | No |
ClinGen TOPMed |
|
|
CA3445677 rs150530045 |
228 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 228 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs937213419 CA128367176 |
229 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA361237407 rs1554119517 |
230 | I>L | No |
ClinGen gnomAD |
|
|
CA361237414 rs1057279342 |
230 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
CA128367179 rs1057279342 |
230 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1554119521 CA361237420 |
231 | K>T | No |
ClinGen gnomAD |
|
|
CA3445680 rs536063756 |
234 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs781812595 CA3445682 |
235 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361237458 rs1554119529 |
237 | D>N | No |
ClinGen gnomAD |
|
|
rs1554119530 CA361237466 |
238 | N>H | No |
ClinGen gnomAD |
|
|
CA3445683 rs140965227 |
239 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128367214 rs895598108 |
240 | P>S | No |
ClinGen gnomAD |
|
|
CA3445684 rs782806378 |
243 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3445685 rs781888206 |
243 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA361237504 rs1554119536 |
244 | Q>* | No |
ClinGen gnomAD |
|
| TCGA novel | 244 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782631973 CA361237508 |
244 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782631973 CA3445687 |
244 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782631973 CA361237507 |
244 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 245 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1562154576 CA361237522 |
246 | V>A | No |
ClinGen Ensembl |
|
|
rs781839041 CA3445688 |
247 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs782408299 CA128367231 |
247 | Y>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3445690 rs782461058 |
249 | V>A | No |
ClinGen ExAC |
|
|
rs781955291 CA128367249 |
249 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA3445693 rs375544937 |
251 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1581615941 CA361237552 |
251 | L>S | No |
ClinGen Ensembl |
|
|
CA3445692 rs782170874 |
251 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs368563521 CA3445695 |
254 | N>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA361237582 rs1554119559 |
256 | A>T | No |
ClinGen TOPMed |
|
|
CA3445697 rs781957318 |
257 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1554119562 CA361237602 |
259 | T>A | No |
ClinGen gnomAD |
|
|
rs1282542350 CA361237624 |
262 | V>A | No |
ClinGen TOPMed |
|
|
rs782070624 CA3445698 |
262 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs782311905 CA3445699 |
263 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs182370314 CA128367305 |
264 | L>I | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs182370314 CA361237632 |
264 | L>V | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs782144250 CA3445701 |
266 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA3445703 rs781857494 |
272 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1328538112 CA361237702 |
274 | N>S | No |
ClinGen TOPMed |
|
|
CA361237708 rs1464400979 |
275 | S>C | No |
ClinGen TOPMed |
|
|
rs782729838 CA3445705 |
275 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445707 rs782443801 |
277 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA3445706 rs199883861 |
277 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA361237748 rs1165165877 |
281 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA361237754 rs782626454 |
282 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554119572 CA361237755 |
282 | G>D | No |
ClinGen gnomAD |
|
|
CA3445711 rs782626454 |
282 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361237753 rs782626454 |
282 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782218525 CA3445712 |
283 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs782218525 CA361237761 |
283 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA361237773 rs1178449834 |
285 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA361237786 rs1232238860 |
287 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs782575162 CA3445715 |
288 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs782292458 CA361237845 CA3445716 |
290 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128367352 rs1032626475 |
291 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs201828641 CA3445718 |
293 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361237903 rs1554119587 |
294 | T>A | No |
ClinGen gnomAD |
|
|
CA3445720 rs374222606 |
295 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs889935841 CA128367355 |
295 | I>T | No |
ClinGen gnomAD |
|
|
rs1554119592 CA361237944 COSM736356 COSM736357 |
296 | D>E | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA361237953 rs868955001 |
297 | P>S | No |
ClinGen Ensembl |
|
|
rs1351948866 CA361237980 |
298 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1554119595 CA361237988 |
299 | S>P | No |
ClinGen gnomAD |
|
|
rs562047607 CA128367360 |
300 | G>R | No |
ClinGen 1000Genomes TOPMed |
|
|
CA128367368 rs368109410 |
303 | R>I | No |
ClinGen ESP TOPMed |
|
|
CA361238069 rs1439639533 |
303 | R>S | No |
ClinGen TOPMed |
|
|
rs1562155662 CA361238092 |
305 | K>E | No |
ClinGen Ensembl |
|
|
rs782787763 CA3445729 |
306 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
|
rs782136038 CA361238116 CA3445727 |
306 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC TOPMed gnomAD NCI-TCGA |
| TCGA novel | 307 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554119607 CA361238147 |
307 | K>R | No |
ClinGen gnomAD |
|
|
rs1554119610 CA361238166 |
308 | L>* | No |
ClinGen gnomAD |
|
|
CA361238181 rs1156745166 |
309 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA3445730 rs781846968 |
309 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1156745166 CA361238183 |
309 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
rs192661342 CA3445731 |
310 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361238195 rs1455564883 |
310 | Y>D | No |
ClinGen TOPMed |
|
|
rs1455564883 CA361238191 |
310 | Y>N | No |
ClinGen TOPMed |
|
|
rs782718867 CA3445732 |
312 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs781797873 CA3445733 |
312 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA361238253 rs1554119614 |
313 | A>S | No |
ClinGen gnomAD |
|
|
rs138543529 CA3445736 CA361238311 |
316 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3445734 rs145876467 |
316 | Y>H | No |
ClinGen ESP ExAC gnomAD |
|
|
rs17844246 CA3445737 |
317 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs17844246 COSM1696255 COSM1696254 CA3445738 |
317 | E>K | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554119620 CA361238320 |
317 | E>V | No |
ClinGen gnomAD |
|
|
CA128367442 rs965421102 |
318 | I>S | No |
ClinGen Ensembl |
|
|
CA361238335 rs965421102 |
318 | I>T | No |
ClinGen Ensembl |
|
|
CA3445739 rs782205660 |
318 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1554119626 CA361238363 |
319 | Q>H | No |
ClinGen gnomAD |
|
|
rs1447646142 CA361238368 |
320 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA361238400 rs1562156062 COSM1310617 COSM1310616 |
322 | A>T | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA3445742 rs376704812 |
325 | K>E | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1350707667 CA361238478 |
326 | G>R | No |
ClinGen TOPMed |
|
|
rs200424378 CA3445743 |
327 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 327 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 328 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361238563 rs952716239 CA128367463 |
330 | M>I | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 332 | G>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782107752 CA3445745 |
332 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs782107752 CA361238595 |
332 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs386352344 RCV000122559 CA232328 |
337 | S>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs386352344 CA128367471 |
337 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs781944142 CA3445747 |
338 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs1290254887 CA361238706 |
339 | K>E | No |
ClinGen TOPMed |
|
|
CA3445748 rs782060780 |
340 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs533295201 CA361238764 |
341 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3445749 rs533295201 |
341 | V>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1554119635 CA361238749 |
341 | V>M | No |
ClinGen gnomAD |
|
|
CA361238784 rs1554119641 |
342 | D>A | No |
ClinGen gnomAD |
|
|
CA361238791 rs1554119641 |
342 | D>V | No |
ClinGen gnomAD |
|
|
rs1554119645 CA361238805 |
343 | I>V | No |
ClinGen gnomAD |
|
|
rs1436455435 CA361238851 |
344 | N>K | No |
ClinGen TOPMed |
|
|
rs1295846717 CA361238843 |
344 | N>S | No |
ClinGen TOPMed |
|
|
rs781892845 CA3445750 |
345 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445752 rs782767651 |
347 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA3445751 rs782135378 |
347 | T>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 349 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361238994 rs1554119652 |
350 | V>I | No |
ClinGen gnomAD |
|
|
CA128367495 rs992640978 |
352 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3445755 rs782572566 |
352 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs17844247 CA361239059 |
353 | T>P | No |
ClinGen Ensembl |
|
|
rs782551806 CA3445757 |
355 | L>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361239163 rs1421469626 |
357 | L>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1554119659 COSM283789 COSM283788 CA361239271 |
361 | E>D | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs782659941 CA3445758 |
362 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA3445760 rs139541416 |
362 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1061834 COSM1061833 rs782621383 CA3445761 |
363 | A>T | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1214557542 CA361239368 |
364 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA361239410 rs1554119671 |
366 | G>A | No |
ClinGen gnomAD |
|
|
CA361239402 rs1554119669 |
366 | G>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3445763 rs782315024 |
367 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs782038098 CA3445764 |
367 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1729450 rs782038098 COSM1729449 CA3445765 |
367 | T>S | liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1210866356 CA361239475 |
368 | V>A | No |
ClinGen TOPMed |
|
|
rs1210866356 CA361239471 |
368 | V>D | No |
ClinGen TOPMed |
|
|
rs1562156896 CA361239491 |
369 | I>F | No |
ClinGen Ensembl |
|
|
CA361239516 rs1554119684 |
369 | I>M | No |
ClinGen gnomAD |
|
|
CA3445766 rs782391222 |
369 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA3445767 rs781982977 |
370 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782104622 CA3445768 |
371 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361239631 rs1554119688 |
372 | I>M | No |
ClinGen gnomAD |
|
|
COSM3946917 CA361239659 COSM3946916 rs781801031 |
373 | T>K | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed |
|
rs781801031 CA3445771 |
373 | T>M | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
|
rs782725155 CA361239636 |
373 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA361239663 rs781801031 |
373 | T>R | No |
ClinGen ExAC TOPMed |
|
|
rs782725155 CA3445769 |
373 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs371276136 CA3445773 |
375 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs781879420 CA3445774 |
377 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782512919 CA3445775 |
377 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781879420 CA361239789 |
377 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445776 rs782629565 |
378 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA361239839 rs1554119699 |
379 | S>P | No |
ClinGen gnomAD |
|
|
rs1554119707 CA3445778 |
380 | G>D | No |
ClinGen Ensembl |
|
|
CA361239866 rs1554119701 |
380 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361239904 rs781833045 |
381 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781833045 CA3445780 |
381 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3445782 rs17844248 |
384 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361240006 rs935693327 |
385 | V>A | No |
ClinGen gnomAD |
|
|
CA128367578 rs935693327 |
385 | V>D | No |
ClinGen gnomAD |
|
|
rs1581618052 CA361239994 |
385 | V>F | No |
ClinGen Ensembl |
|
|
rs782260247 CA128367585 |
386 | T>I | No |
ClinGen TOPMed |
|
| TCGA novel | 388 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361240136 rs1170903796 |
390 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
CA361240138 rs1170903796 |
390 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs566698414 CA3445785 |
391 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs782363185 CA3445787 CA361240180 |
392 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1423182974 CA361240177 |
392 | H>R | No |
ClinGen TOPMed |
|
|
CA361240193 rs1554119739 |
393 | V>D | No |
ClinGen gnomAD |
|
|
CA361240185 rs1054445908 |
393 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1054445908 CA128367631 |
393 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA361240188 rs1054445908 |
393 | V>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 394 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781951812 CA3445788 |
396 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA128367645 rs890080538 |
397 | L>V | No |
ClinGen Ensembl |
|
| TCGA novel | 399 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782030377 CA3445791 |
399 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA361240344 rs1581618359 |
401 | F>Y | No |
ClinGen Ensembl |
|
|
CA3445792 rs782143302 |
406 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1554119753 CA361240481 |
408 | V>M | No |
ClinGen gnomAD |
|
|
CA361240549 rs782096647 CA361240552 |
411 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445797 rs549114768 |
412 | A>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361240581 rs1234815335 |
413 | L>Q | No |
ClinGen TOPMed |
|
|
rs782549832 CA3445799 |
415 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
COSM1241551 COSM1241550 rs782813610 CA3445801 |
415 | R>H | Variant assessed as Somatic; 0.0 impact. oesophagus large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs782813610 CA3445800 |
415 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA361240627 rs782513202 |
416 | E>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs537511000 CA361240644 CA3445803 |
416 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782513202 COSM1219560 COSM1219561 CA3445802 |
416 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA128367731 rs376783132 |
417 | S>N | No |
ClinGen ESP |
|
|
rs782215868 CA3445804 |
417 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361240669 CA361240666 rs782456335 |
418 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445805 rs782456335 |
418 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782293128 CA3445807 |
420 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1061838 rs1418613785 COSM1061837 CA361240755 |
422 | E>D | endometrium [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
| TCGA novel | 424 | V>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361240796 rs1554119777 |
425 | V>M | No |
ClinGen gnomAD |
|
|
rs1554119779 CA361240821 |
426 | T>I | No |
ClinGen gnomAD |
|
|
rs1422523860 CA361240833 |
427 | A>P | No |
ClinGen TOPMed |
|
|
rs148429256 CA3445813 |
428 | R>P | No |
ClinGen ESP ExAC gnomAD |
|
|
rs148429256 CA361240858 |
428 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA361240864 rs1554119788 |
429 | D>N | No |
ClinGen gnomAD |
|
|
CA361240903 rs1178356320 |
430 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361240887 rs1554119789 |
430 | G>R | No |
ClinGen gnomAD |
|
|
CA361240897 rs1178356320 |
430 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA361240889 rs1554119789 |
430 | G>W | No |
ClinGen gnomAD |
|
|
CA3445815 COSM1754027 COSM1754028 rs782027744 |
432 | S>L | Variant assessed as Somatic; impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA |
|
COSM317810 rs1457591142 COSM317811 CA361240951 |
433 | P>S | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1457591142 CA361240944 |
433 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3445816 rs782137049 |
434 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs1554119803 CA361240980 |
435 | L>V | No |
ClinGen gnomAD |
|
|
rs200076458 CA3445818 |
436 | W>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782466691 CA3445819 |
436 | W>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 437 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1335115262 CA361241022 |
437 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs782718624 CA3445820 |
438 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA361241026 rs1581619076 |
438 | T>P | No |
ClinGen Ensembl |
|
|
rs781787997 CA3445821 |
439 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361241046 rs1581619103 |
439 | T>P | No |
ClinGen Ensembl |
|
|
rs781787997 CA361241053 |
439 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361241073 rs1554119809 |
440 | S>N | No |
ClinGen gnomAD |
|
|
CA361241083 rs1554119811 CA361241080 |
440 | S>R | No |
ClinGen gnomAD |
|
|
rs1241984619 CA361241098 |
441 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361241093 rs1241984619 |
441 | V>E | No |
ClinGen TOPMed gnomAD |
|
|
CA3445822 rs782550930 |
441 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA361241106 rs1307599931 |
442 | S>P | No |
ClinGen TOPMed |
|
|
rs1554119822 CA361241156 |
444 | E>D | No |
ClinGen gnomAD |
|
|
CA361241135 rs539789047 COSM1061840 COSM1061839 |
444 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs539789047 CA3445824 |
444 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3445825 rs558179356 |
446 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782317844 CA3445828 |
447 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA361241243 rs1365670963 |
447 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs782204600 CA361241228 COSM3428964 COSM3428963 |
447 | D>N | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3445827 rs782204600 |
447 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554119831 CA361241252 |
448 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361241294 rs782287156 |
449 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445831 rs782400108 |
450 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554119838 CA361241311 |
450 | D>H | No |
ClinGen gnomAD |
|
|
rs376199248 CA3445832 |
451 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM3409799 COSM3409798 rs782095286 CA3445833 |
452 | A>T | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361241363 rs1195907672 |
452 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3445836 rs782053456 |
454 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445837 rs372842569 |
455 | F>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA361241440 rs1239286349 COSM258853 COSM258852 |
456 | A>T | large_intestine Variant assessed as Somatic; impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA361243153 rs782132897 |
458 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA361243167 rs1351448995 |
458 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs782132897 CA3445839 |
458 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554119859 CA361243272 |
462 | V>A | No |
ClinGen gnomAD |
|
|
CA361243294 rs1234756040 |
463 | F>C | No |
ClinGen TOPMed |
|
|
CA361243339 rs1554119866 |
464 | V>A | No |
ClinGen gnomAD |
|
|
CA3445843 rs574219981 |
464 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs574219981 CA3445842 |
464 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA128367945 rs977122092 |
465 | K>R | No |
ClinGen Ensembl |
|
|
rs868995435 CA361243363 |
466 | E>K | No |
ClinGen Ensembl |
|
|
rs1554119874 CA361243416 |
468 | N>T | No |
ClinGen Ensembl |
|
|
CA128367966 rs782314094 |
469 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs782314094 CA361243437 |
469 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3445845 rs782543365 |
470 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA361243472 rs1359187318 |
471 | G>V | No |
ClinGen TOPMed |
|
|
CA3445847 rs782256152 |
474 | I>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 475 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1581619871 CA361243660 |
476 | T>M | No |
ClinGen Ensembl |
|
|
CA361243687 rs1176150455 |
477 | V>E | No |
ClinGen TOPMed gnomAD |
|
|
rs782361395 CA3445848 |
477 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA361243721 rs1454968825 |
478 | S>L | No |
ClinGen TOPMed |
|
|
CA128367971 rs17844250 |
479 | A>T | No |
ClinGen Ensembl |
|
|
CA128367973 rs202116317 |
479 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1377468953 CA361243738 |
480 | W>R | No |
ClinGen TOPMed |
|
|
CA3445850 COSM589723 COSM589724 rs782196410 |
482 | A>V | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed |
|
rs782310227 COSM589722 CA3445851 COSM589721 |
484 | A>E | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs782310227 CA361243896 |
484 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 486 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3445852 rs782029064 |
486 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554119891 CA361243934 |
486 | E>K | No |
ClinGen gnomAD |
|
|
CA128367981 rs942944199 |
487 | N>Y | No |
ClinGen Ensembl |
|
| TCGA novel | 488 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs901321860 CA128367995 |
489 | L>R | No |
ClinGen Ensembl |
|
|
rs782389342 CA3445854 |
489 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA361244100 rs1554119899 |
492 | Y>H | No |
ClinGen gnomAD |
|
|
rs533353991 CA3445857 |
493 | S>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs533353991 CA361244175 |
493 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361244159 rs1344009372 |
493 | S>P | No |
ClinGen TOPMed |
|
|
CA361244220 rs1399470004 |
495 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1399470004 CA361244223 |
495 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
CA361244202 rs1278846442 |
495 | V>M | No |
ClinGen TOPMed |
|
|
rs1554119901 CA361244245 |
496 | E>D | No |
ClinGen gnomAD |
|
|
CA128368029 rs994374516 |
497 | R>G | No |
ClinGen Ensembl |
|
|
rs782046976 CA3445859 |
497 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs1338592618 CA361244273 |
498 | R>Q | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 498 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3445861 rs782790916 |
499 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA3445860 rs782790916 |
499 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA3445862 rs782512629 |
500 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1315323684 CA361244297 |
500 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1315323684 CA361244296 |
500 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs781823094 CA3445864 |
501 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs144556236 CA361244332 |
501 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3445865 rs1554119913 |
501 | E>G | No |
ClinGen Ensembl |
|
|
CA3445868 rs551711072 |
502 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs551711072 CA3445869 |
502 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs551711072 CA361244339 |
502 | R>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs147855137 CA361244352 |
503 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3445871 rs147855137 |
503 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs147855137 CA3445870 |
503 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3445872 rs782245079 COSM482061 COSM482062 |
503 | A>V | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554119935 CA361244390 |
504 | L>F | No |
ClinGen gnomAD |
|
|
CA361244409 rs567436398 |
505 | S>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3445875 rs567436398 |
505 | S>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3445877 rs782023000 |
506 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA361244480 rs1554119942 |
507 | Y>S | No |
ClinGen gnomAD |
|
|
CA3445879 rs549460778 |
508 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3445878 rs549460778 |
508 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361244543 rs1338477512 |
509 | S>* | No |
ClinGen TOPMed |
|
|
CA361244561 rs1562160461 |
510 | V>L | No |
ClinGen Ensembl |
|
|
CA361244644 rs1340411641 |
512 | A>G | No |
ClinGen TOPMed |
|
|
rs781796613 CA3445884 |
514 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1332531928 CA361244701 |
514 | S>N | No |
ClinGen TOPMed |
|
|
CA361244719 rs1554119952 |
515 | G>D | No |
ClinGen gnomAD |
|
|
CA3445885 rs782557093 |
515 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782557093 CA361244710 |
515 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554119952 CA361244725 |
515 | G>V | No |
ClinGen gnomAD |
|
|
rs1169490682 CA361244802 |
518 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
rs370463257 CA3445886 |
518 | Y>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554119955 CA361244819 |
519 | A>G | No |
ClinGen gnomAD |
|
| TCGA novel | 522 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361244887 rs782562923 |
523 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA3445892 rs782562923 |
523 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3445891 rs782446771 |
523 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361244901 rs1581620917 |
524 | D>N | No |
ClinGen Ensembl |
|
|
CA361244949 rs1183970604 |
525 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1554119963 CA361244952 |
526 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782397943 CA3445894 |
528 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782397943 CA3445895 |
528 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1228967368 CA361245069 |
530 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA361245063 rs1275067211 |
530 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs781947365 CA3445898 |
531 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA3445897 rs553702843 |
531 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3445900 rs201395161 |
533 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA128368165 rs977262440 |
534 | Q>H | No |
ClinGen Ensembl |
|
| rs1355816339 | 534 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782025511 CA3445902 CA3445901 |
535 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445903 rs202138167 |
536 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs573477679 CA3445905 CA3445907 |
536 | S>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs202138167 CA3445904 |
536 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782655019 CA3445909 |
537 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA361245215 rs782655019 |
537 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA3445908 rs782549196 |
537 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361245242 rs1396244589 |
539 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1323573570 CA361245256 |
539 | D>V | No |
ClinGen TOPMed |
|
| TCGA novel | 540 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1404224188 CA361245283 |
540 | A>V | No |
ClinGen TOPMed |
|
|
CA3445912 COSM1541735 rs782611214 COSM1541734 |
542 | V>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3445913 rs782611214 |
542 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3445914 rs782316579 |
543 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs782316579 CA361245308 |
543 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA361245309 rs782316579 |
543 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs781983903 CA3445918 |
546 | G>A | No |
ClinGen ExAC |
|
| TCGA novel | 546 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA128368209 rs986304665 |
546 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs574282635 CA3445921 |
549 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs574282635 CA3445920 |
549 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361245400 rs202245278 |
550 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445922 rs202245278 |
550 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361245435 rs1287866017 |
552 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
CA361245436 rs1287866017 |
552 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA128368273 rs944392120 |
553 | V>E | No |
ClinGen Ensembl |
|
|
rs782749349 CA3445926 |
554 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA3445927 rs781827530 COSM1219556 COSM1219557 |
555 | V>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361245500 rs1554120018 |
556 | L>Q | No |
ClinGen gnomAD |
|
|
rs1355078220 CA361245524 |
558 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA361245607 rs1554120026 |
562 | A>G | No |
ClinGen gnomAD |
|
|
CA3445929 COSM257675 rs782465720 COSM257676 |
562 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs562978091 COSM1261254 CA3445932 COSM1261253 |
563 | P>L | oesophagus [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
rs562978091 CA128368288 |
563 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs377546082 CA3445934 |
564 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361245643 rs1554120028 |
565 | L>M | No |
ClinGen gnomAD |
|
|
CA3445936 rs143287636 |
565 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs143287636 CA361245651 |
565 | L>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361245677 rs1347565663 |
566 | L>W | No |
ClinGen TOPMed |
|
|
rs1420161301 CA361245703 |
567 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA3445937 rs782594473 |
567 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA361245725 rs1554120037 |
568 | P>L | No |
ClinGen gnomAD |
|
|
CA361245752 rs1455418008 |
569 | R>S | No |
ClinGen TOPMed |
|
|
CA3445940 rs782305440 |
570 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1245012473 CA361245806 |
573 | A>D | No |
ClinGen TOPMed |
|
|
COSM283791 CA361245800 rs1477834475 COSM283790 |
573 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1245012473 CA361245807 |
573 | A>V | No |
ClinGen TOPMed |
|
|
CA361245825 rs1554120046 |
575 | G>D | No |
ClinGen gnomAD |
|
|
rs1554120045 CA361245820 |
575 | G>S | No |
ClinGen gnomAD |
|
|
CA361245837 rs1554120052 |
576 | A>E | No |
ClinGen gnomAD |
|
|
CA128368364 rs1047221843 |
576 | A>S | No |
ClinGen TOPMed |
|
|
rs1554120057 CA361245861 |
578 | S>R | No |
ClinGen gnomAD |
|
|
CA361245875 rs1554120058 |
579 | E>D | No |
ClinGen gnomAD |
|
|
CA361245866 rs1562162174 |
579 | E>Q | No |
ClinGen Ensembl |
|
|
rs782377938 CA3445943 |
580 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445945 rs782015671 |
582 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1279813939 CA361245900 |
582 | P>S | No |
ClinGen TOPMed |
|
|
CA361245910 COSM1541733 rs1218240596 COSM1541732 |
583 | W>* | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1005604717 CA128368371 |
584 | S>* | No |
ClinGen Ensembl |
|
|
rs782166727 CA3445948 |
586 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs782166727 CA361245947 |
586 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA361245954 rs1554120065 |
587 | A>S | No |
ClinGen gnomAD |
|
|
rs1400068263 CA361245965 |
588 | G>E | No |
ClinGen TOPMed |
|
|
CA3445950 rs781873607 CA3445951 |
588 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs781818100 CA3445953 |
590 | V>G | No |
ClinGen ExAC gnomAD |
|
|
COSM163304 COSM163303 rs1339361445 CA361245985 |
590 | V>M | NS [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA361246007 rs1554120077 |
592 | A>E | No |
ClinGen gnomAD |
|
|
CA3445954 rs782449118 |
592 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361246031 rs1581622293 |
594 | V>G | No |
ClinGen Ensembl |
|
|
CA3445955 rs371053543 |
595 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs782287927 CA3445956 |
595 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA361246048 rs1554120081 |
596 | A>S | No |
ClinGen gnomAD |
|
|
CA3445957 rs782526006 |
596 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA128368448 rs782161037 |
597 | V>L | No |
ClinGen gnomAD |
|
|
rs782228183 CA361246063 |
598 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs782228183 CA3445959 |
598 | D>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1554120094 CA361246119 |
602 | G>A | No |
ClinGen gnomAD |
|
|
rs1554120095 CA361246129 |
603 | Y>C | No |
ClinGen gnomAD |
|
|
CA361246138 rs1554120101 |
604 | N>D | No |
ClinGen gnomAD |
|
|
CA361246151 rs1554120104 |
605 | A>P | No |
ClinGen gnomAD |
|
|
rs782183971 CA3445962 |
605 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA3445964 rs782022639 |
606 | W>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361246174 rs782135043 |
607 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1423336381 CA361246178 |
607 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs782135043 CA3445965 |
607 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs267600383 CA128368480 |
608 | S>L | No |
ClinGen Ensembl |
|
|
rs375837956 CA361246206 |
609 | Y>* | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1196186829 CA361246196 |
609 | Y>D | No |
ClinGen TOPMed |
|
|
CA3445967 rs782759874 |
610 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs185043234 CA3445968 |
611 | L>I | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
rs185043234 CA3445969 |
611 | L>V | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
CA3445971 rs145760272 |
613 | L>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3445973 rs143010081 |
614 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs143010081 CA361246291 |
614 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361246338 rs1554120119 |
616 | G>C | No |
ClinGen gnomAD |
|
|
CA361246337 rs1554120119 |
616 | G>R | No |
ClinGen gnomAD |
|
|
rs1554120120 COSM346779 CA361246357 COSM346780 |
617 | S>R | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1218904769 CA361246385 |
618 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA361246374 rs782509295 |
618 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782509295 CA3445975 |
618 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782509295 CA361246363 |
618 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782194606 CA3445978 |
619 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs782692143 CA3445980 |
619 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782692143 CA3445979 |
619 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA3445977 rs782194606 |
619 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs782395206 CA3445981 |
621 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA361246478 COSM246417 rs1554120143 COSM246418 |
621 | P>L | prostate [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs782395206 CA361246468 |
621 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs150299243 CA3445984 |
623 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs781928688 CA3445985 |
623 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs150299243 CA361246499 |
623 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM75865 CA361246533 rs1554120148 |
624 | V>M | ovary Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA361246555 rs1562163449 |
625 | G>E | No |
ClinGen Ensembl |
|
|
rs782019473 CA3445988 |
628 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3445992 rs782066641 |
630 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1554120158 CA361246736 |
631 | I>M | No |
ClinGen gnomAD |
|
|
rs782706957 CA3445993 |
632 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA361246771 rs1554120167 |
633 | T>M | No |
ClinGen gnomAD |
|
|
CA3445995 rs367904525 |
635 | R>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs549520039 CA3445997 |
636 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs149491908 CA3445998 |
638 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361246932 rs782493652 |
639 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA3446001 rs782187936 |
639 | E>D | No |
ClinGen ExAC |
|
|
rs374885355 CA3446000 |
639 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782493652 CA361246911 |
639 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA3445999 rs782493652 |
639 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA361246968 rs1466360830 |
640 | A>D | No |
ClinGen TOPMed |
|
| TCGA novel | 640 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3446002 rs782298789 |
642 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs782684742 CA3446003 |
643 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782684742 CA128368617 |
643 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361247074 COSM175553 COSM175552 rs143944331 |
644 | R>* | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA361247070 rs143944331 |
644 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446005 rs782392168 |
644 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs547112587 CA3446006 |
645 | H>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1482463175 CA361247137 |
646 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs782098586 CA361247141 |
646 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782098586 CA3446007 |
646 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361247130 COSM353327 rs1482463175 COSM353328 |
646 | R>S | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs549000416 CA128368625 |
648 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs782163071 CA361247179 CA3446010 |
649 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1581623441 CA361247245 |
651 | V>G | No |
ClinGen Ensembl |
|
|
CA3446012 rs781882818 |
653 | D>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 653 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3446013 rs782122786 |
654 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1246364353 CA361247331 |
655 | G>S | No |
ClinGen TOPMed |
|
|
rs1321854589 CA361247349 |
656 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1321854589 CA361247345 |
656 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1311910675 CA361247391 |
657 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361247390 rs1311910675 |
657 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs782753362 CA3446014 |
658 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs781820194 CA3446015 |
659 | L>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554120208 CA361247496 |
660 | T>A | No |
ClinGen gnomAD |
|
|
CA361247550 rs372284917 |
661 | A>D | No |
ClinGen ESP |
|
| TCGA novel | 661 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs372284917 CA128368635 |
661 | A>V | No |
ClinGen ESP |
|
|
rs998701281 CA128368643 |
663 | A>G | No |
ClinGen Ensembl |
|
| TCGA novel | 663 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 664 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3446017 rs782572078 |
664 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA361247643 rs1554120220 |
664 | T>S | No |
ClinGen gnomAD |
|
|
rs1331830179 CA361247692 |
665 | V>A | No |
ClinGen TOPMed |
|
|
rs1375197840 CA361247675 |
665 | V>L | No |
ClinGen TOPMed |
|
|
rs782641897 CA3446020 |
666 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs565650637 CA3446021 |
667 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361247761 rs1329629372 |
668 | S>* | No |
ClinGen TOPMed |
|
|
rs1369166743 CA361247793 |
670 | V>M | No |
ClinGen TOPMed |
|
|
CA361247858 rs147392568 |
671 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361247868 rs1554120232 |
672 | S>G | No |
ClinGen gnomAD |
|
|
rs1422605592 CA361247908 |
673 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs75272992 CA3446027 |
676 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs75272992 CA3446028 |
676 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446029 rs781970176 |
677 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs975848119 CA128368695 |
678 | A>S | No |
ClinGen TOPMed |
|
|
rs868983701 CA361248051 |
679 | S>* | No |
ClinGen gnomAD |
|
|
CA361248059 rs868983701 |
679 | S>L | No |
ClinGen gnomAD |
|
|
rs782090194 CA3446030 |
679 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1264377943 CA361248095 |
680 | S>L | No |
ClinGen TOPMed |
|
|
CA3446033 rs782153484 |
682 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA3446036 rs782494955 |
683 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361248195 rs781870691 |
683 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs1239145477 CA361248188 |
683 | W>R | No |
ClinGen TOPMed |
|
|
CA3446035 rs781870691 |
683 | W>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554120248 CA361248249 |
684 | V>A | No |
ClinGen gnomAD |
|
|
CA361248215 rs1307311865 |
684 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1307311865 CA361248210 |
684 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA361248293 rs1554120249 |
685 | G>D | No |
ClinGen gnomAD |
|
|
CA361248334 rs782443070 |
686 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA361248323 rs538442586 |
686 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs538442586 CA3446038 COSM1433731 COSM1433730 |
686 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA3446039 rs782443070 |
686 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA3446040 rs556764988 |
687 | A>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1554120257 CA361248399 |
688 | G>A | No |
ClinGen gnomAD |
|
|
CA361248410 rs1554120257 |
688 | G>V | No |
ClinGen gnomAD |
|
| TCGA novel | 690 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs373020261 CA3446043 |
691 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs782231259 CA361248488 |
692 | T>A | No |
ClinGen ExAC |
|
|
rs782231259 CA3446044 |
692 | T>S | No |
ClinGen ExAC |
|
|
CA361248600 rs1200494140 |
694 | V>A | No |
ClinGen TOPMed |
|
|
rs145817011 CA3446045 |
694 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446048 rs375001935 CA361248643 |
695 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781930925 CA361248603 |
695 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs782177977 CA3446047 |
695 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs781930925 CA3446046 |
695 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1554120266 CA361248647 |
696 | V>I | No |
ClinGen gnomAD |
|
|
CA3446049 rs782011696 |
697 | N>H | No |
ClinGen ExAC |
|
|
CA361248690 rs782125795 |
697 | N>I | No |
ClinGen ExAC gnomAD |
|
|
rs545469246 CA3446051 |
697 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3446050 rs782125795 |
697 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs782078913 CA3446053 |
698 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs151049201 CA361248723 |
698 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446052 rs151049201 |
698 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554120281 CA361248773 |
699 | Y>* | No |
ClinGen gnomAD |
|
|
rs369236781 CA3446056 |
702 | I>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs369236781 CA3446055 |
702 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 703 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3446057 rs782780832 |
703 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs781862610 CA3446058 |
705 | C>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM213417 rs1300605850 CA361248973 COSM213418 |
706 | A>V | large_intestine Variant assessed as Somatic; impact. breast [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA3446061 rs139680439 |
707 | V>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361248984 rs1554120290 |
707 | V>I | No |
ClinGen gnomAD |
|
|
CA3446062 rs782431271 |
708 | S>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361249004 rs1554120291 |
708 | S>P | No |
ClinGen gnomAD |
|
|
CA3446063 rs782679376 |
710 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA3446064 rs782272538 |
711 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs782385792 CA3446065 |
713 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361249137 rs1174688256 |
715 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs782334581 CA3446068 |
717 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554120296 CA361249186 |
718 | Y>C | No |
ClinGen gnomAD |
|
|
CA128368808 rs1054369407 |
719 | T>A | No |
ClinGen TOPMed |
|
|
rs1173603026 CA361249213 |
720 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361249242 rs1554120301 |
723 | C>R | No |
ClinGen gnomAD |
|
|
CA361249289 rs1554120305 |
725 | V>M | No |
ClinGen gnomAD |
|
|
rs1554120307 CA361249325 |
726 | P>L | No |
ClinGen gnomAD |
|
|
CA3446074 rs782005280 |
727 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA3446073 rs782005280 |
727 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1554120308 CA361249328 |
727 | P>T | No |
ClinGen gnomAD |
|
|
CA361249371 rs1562165837 |
728 | T>S | No |
ClinGen Ensembl |
|
|
rs781824511 CA361249384 |
729 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446076 rs781824511 |
729 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs868974335 CA361249423 |
730 | G>A | No |
ClinGen Ensembl |
|
|
CA3446077 rs782070675 |
731 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA361249432 rs782070675 |
731 | A>V | No |
ClinGen ExAC gnomAD |
|
|
COSM3239566 COSM3239565 CA3446078 rs201558063 |
732 | R>C | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs781899428 CA3446079 |
732 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446081 rs782645226 |
733 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA3446080 rs782528536 COSM205039 COSM205038 |
733 | A>T | large_intestine Variant assessed as Somatic; impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361249482 rs1320062753 |
734 | P>L | No |
ClinGen TOPMed |
|
|
CA3446083 rs782486996 |
735 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA361249562 rs1554120320 |
737 | P>S | No |
ClinGen gnomAD |
|
|
rs532139420 CA3446085 |
738 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3446086 rs373175286 |
738 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs532139420 CA128368897 |
738 | T>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782268949 CA3446088 |
741 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3446089 rs782378718 |
742 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446090 rs781977855 |
743 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA3446091 rs374379905 |
743 | S>R | No |
ClinGen ESP ExAC gnomAD |
|
|
COSM1633985 CA361249700 rs1396970768 COSM1633986 |
744 | A>T | liver Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1554120333 CA361249716 |
745 | V>L | No |
ClinGen gnomAD |
|
|
rs868943849 CA361249731 |
746 | G>E | No |
ClinGen Ensembl |
|
|
CA3446092 rs782337760 |
746 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs781924677 CA3446093 |
748 | W>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361249821 rs1173787059 |
750 | Y>C | No |
ClinGen TOPMed |
|
|
rs1554120342 CA361249846 |
751 | S>* | No |
ClinGen gnomAD |
|
|
CA361249865 rs1423672531 |
753 | Q>* | No |
ClinGen TOPMed |
|
|
rs547468977 COSM1433737 CA3446095 COSM1433736 |
755 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs781865223 CA3446096 |
756 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
rs781865223 CA361249918 |
756 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA361249962 rs1581625432 |
758 | V>G | No |
ClinGen Ensembl |
|
|
rs782112460 CA3446097 |
759 | C>F | No |
ClinGen ExAC gnomAD |
|
|
CA128368931 rs1015939422 |
759 | C>R | No |
ClinGen Ensembl |
|
|
rs782745043 CA3446098 |
759 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128368969 rs963251079 |
760 | S>C | No |
ClinGen Ensembl |
|
|
CA361250003 rs1554120360 |
761 | G>A | No |
ClinGen gnomAD |
|
|
rs1554120364 CA361250052 |
763 | D>E | No |
ClinGen gnomAD |
|
|
CA361250064 rs781823139 |
764 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs6858913 CA3446102 VAR_048523 |
764 | P>L | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs781823139 CA3446101 COSM4155490 COSM4155491 |
764 | P>S | kidney [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA3446100 rs781823139 |
764 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446105 rs146594045 |
765 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128369007 rs146594045 |
765 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446106 rs146594045 |
765 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446104 rs144400963 |
765 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs540368650 CA3446107 |
766 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| rs558931090 | 766 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs540368650 CA3446108 |
766 | K>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs548160646 CA3446110 |
770 | M>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 771 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361250271 rs1218080723 |
774 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs981486874 CA128369043 |
774 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1218080723 CA361250274 |
774 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3446111 rs782008219 |
775 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446112 rs567979520 |
776 | L>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361250365 rs1340196093 |
777 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 778 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361250389 rs1554120391 |
779 | G>C | No |
ClinGen gnomAD |
|
|
rs782364093 CA3446113 |
781 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782364093 CA361250464 |
781 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554120394 CA361250449 |
781 | D>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1554120396 CA361250533 |
783 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3446114 rs141467414 |
784 | E>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554120398 CA361250591 |
785 | E>Q | No |
ClinGen gnomAD |
|
|
rs782081459 CA3446116 |
786 | K>* | No |
ClinGen ExAC gnomAD |
|
|
CA3446115 rs782081459 |
786 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA3446117 rs781921851 |
787 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1407707059 CA361250715 |
788 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs782152193 CA3446118 |
788 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA361250769 rs1554120409 |
789 | S>* | No |
ClinGen gnomAD |
|
|
rs782793787 CA3446119 |
790 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1554120411 CA361250821 |
791 | S>P | No |
ClinGen gnomAD |
|
|
COSM1495976 COSM1495977 rs1554120415 CA361250951 |
794 | V>A | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA128369082 rs1054822282 |
794 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361250934 rs1054822282 |
794 | V>L | No |
ClinGen TOPMed |
|
|
rs781857265 CA3446120 |
796 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs782073950 CA3454452 |
797 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA361259520 rs1490306705 |
797 | P>S | No |
ClinGen TOPMed |
|
|
rs374951627 CA3454453 |
798 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781913955 CA3454454 |
798 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA3454455 rs781913955 |
798 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782109224 CA3454458 |
803 | D>H | No |
ClinGen ExAC |
|
|
COSM3696815 COSM3696819 COSM3696826 COSM3696817 CA3454459 COSM3696814 COSM3696822 COSM3696816 COSM3696828 COSM3696812 COSM3696820 rs782774245 COSM3696813 COSM3696823 COSM3696825 COSM3696821 COSM3696827 COSM3696818 COSM3696824 |
804 | W>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361259640 rs782774245 |
804 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA3454460 rs141879545 |
805 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454463 rs781815387 |
808 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138901709 CA3454464 |
809 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782686641 CA3454465 |
810 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1363421000 CA361259736 |
811 | R>I | No |
ClinGen TOPMed |
|
|
rs1586790986 CA361259751 |
812 | A>G | No |
ClinGen Ensembl |
|
|
CA3454466 rs782253140 |
813 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454467 rs782336746 |
814 | M>V | No |
ClinGen ExAC |
|
|
CA361259787 rs1554240128 |
815 | H>N | No |
ClinGen gnomAD |
|
|
rs149397164 CA3454468 |
816 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782426631 CA3454484 |
817 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782587733 CA3454485 |
817 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs782426631 CA361260538 |
817 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1181664726 CA361260559 |
818 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361260577 rs1554244276 |
819 | H>P | No |
ClinGen gnomAD |
|
|
COSM1062442 COSM1062448 COSM1062450 rs782273708 COSM1062445 COSM1062454 COSM1062455 COSM1062443 COSM1062452 COSM1062456 COSM1062457 COSM1062451 COSM1062453 COSM1062449 COSM1062447 CA3454486 COSM1062444 |
819 | H>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3454488 rs782634646 |
821 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454487 rs782419098 |
821 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs147537783 CA3454489 |
822 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs981642614 CA128362369 |
823 | A>T | No |
ClinGen Ensembl |
|
|
rs782347331 CA3454490 |
824 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260711 rs1468199443 |
825 | I>V | No |
ClinGen TOPMed |
|
|
rs555523473 CA3454493 |
827 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139355257 CA3454492 |
827 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782025005 CA3454494 |
829 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260802 rs1278779763 |
830 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3454495 rs201991205 |
832 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454497 rs201572428 |
834 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3454496 rs782766562 |
834 | D>V | No |
ClinGen ExAC |
|
|
rs1554244431 CA361260933 |
836 | Q>R | No |
ClinGen gnomAD |
|
|
CA3454498 rs782094765 |
837 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454499 RCV000950135 rs79247475 |
838 | P>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA128362405 rs369053351 |
838 | P>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1554244455 CA361260996 |
839 | T>A | No |
ClinGen gnomAD |
|
|
CA3454501 rs782544627 |
840 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454502 rs577838197 |
842 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454504 rs781852534 |
842 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs781852534 CA3454503 |
842 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs782605920 CA3454505 |
842 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs199851685 CA3454506 |
844 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454507 rs782437404 |
845 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs560422677 CA3454508 |
845 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs560422677 CA3454509 |
845 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361261129 rs782437404 |
845 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782179145 CA3454531 |
846 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454532 rs782321757 |
849 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554262240 CA361268348 |
851 | E>G | No |
ClinGen gnomAD |
|
|
rs781996586 CA3454536 |
857 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1179266 rs782079089 COSM1179264 COSM1179272 COSM1179273 COSM1179269 COSM1179270 COSM1179277 COSM1179268 COSM1179263 COSM1179271 COSM1179278 COSM1179275 COSM1179276 COSM1179265 CA3454537 COSM1179267 COSM1179274 |
858 | A>V | lung prostate [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1588246273 CA361268557 |
860 | V>G | No |
ClinGen Ensembl |
|
|
CA3454540 rs782068657 |
860 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1563727066 CA361268679 |
864 | S>N | No |
ClinGen Ensembl |
|
|
COSM139598 COSM139601 COSM139604 COSM139606 COSM139609 COSM139603 COSM139600 COSM139611 COSM139608 rs1554262287 COSM139599 COSM139607 COSM139602 COSM139605 COSM139610 CA361268865 |
870 | G>E | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs900919931 CA128372514 |
870 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1554262289 CA361268920 |
872 | G>D | No |
ClinGen gnomAD |
|
|
CA3454542 rs575518914 |
874 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175529844 CA361268995 |
875 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3454543 rs782119637 |
877 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454546 rs552954748 |
878 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552954748 CA3454545 |
878 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs373683237 CA3454547 |
879 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1486746921 CA361269173 |
880 | G>S | No |
ClinGen TOPMed |
|
|
CA128372547 rs1057913 |
884 | D>A | No |
ClinGen Ensembl |
|
|
rs371269236 CA3454551 |
884 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454552 rs782334415 |
885 | K>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454553 rs782623559 |
888 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3454555 rs782328874 |
889 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454556 rs200822345 |
890 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454559 rs782009776 |
894 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142720081 CA361269729 |
894 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3454558 rs142720081 |
894 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782087059 CA3454560 |
895 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1289763016 CA361269834 |
897 | I>V | No |
ClinGen TOPMed |
|
|
rs760426957 CA3454562 |
898 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1166265 COSM1166271 COSM1166266 COSM1166268 COSM1166267 COSM1166273 COSM1166276 COSM1166277 COSM1166272 COSM1166264 COSM1166279 rs147351924 CA3454561 COSM1166275 COSM1166269 COSM1166278 COSM1166270 COSM1166274 |
898 | R>W | large_intestine haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA361269875 rs1554262408 |
899 | Q>K | No |
ClinGen gnomAD |
|
|
CA361269953 rs1554262420 |
901 | P>A | No |
ClinGen gnomAD |
|
|
CA361269962 rs1359138927 |
901 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1314860754 CA361269972 |
902 | T>A | No |
ClinGen TOPMed |
|
|
CA361270002 rs1554262437 |
903 | N>K | No |
ClinGen TOPMed |
|
|
CA3454564 rs148436868 |
904 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554262456 CA361270119 |
906 | I>T | No |
ClinGen gnomAD |
|
|
rs781853535 CA3454565 |
906 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529364872 CA128372646 |
907 | D>E | No |
ClinGen Ensembl |
|
|
CA3454567 rs142570778 |
907 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128372638 rs782057926 |
907 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3454568 rs781835321 |
908 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs782451974 CA3454569 |
911 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3454570 rs782578873 |
913 | T>I | No |
ClinGen ExAC |
|
|
rs782274123 CA3454571 |
914 | F>S | No |
ClinGen ExAC gnomAD |
|
|
COSM216699 COSM216705 CA3454573 COSM216710 rs782642898 COSM1158471 COSM216696 COSM216700 COSM216702 COSM216709 COSM216704 COSM216698 COSM216697 COSM216706 COSM216707 COSM216701 COSM216703 COSM216708 |
915 | G>S | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454574 rs782270689 |
917 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs782270689 CA361270554 |
917 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1259591783 CA361270565 |
918 | E>Q | No |
ClinGen TOPMed |
|
|
CA361270593 rs1554262487 |
919 | E>D | No |
ClinGen gnomAD |
|
|
CA3454575 rs782348993 |
920 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs781972089 CA3454577 |
921 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554262492 CA361270633 |
921 | K>R | No |
ClinGen gnomAD |
|
|
rs374660085 CA3454578 |
926 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361270828 rs1554262513 |
927 | K>R | No |
ClinGen gnomAD |
|
|
CA3454579 rs782413551 |
928 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782413551 CA361270853 |
928 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307653192 CA361270984 |
931 | K>N | No |
ClinGen TOPMed |
|
|
CA128372721 rs184181976 |
931 | K>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
rs1554262529 CA361271070 |
934 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782776948 CA3454583 |
936 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3454584 rs781954349 |
939 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361271296 rs1295693430 |
940 | N>D | No |
ClinGen TOPMed |
|
|
rs1554262551 CA361271322 |
940 | N>K | No |
ClinGen gnomAD |
|
|
CA361271306 rs1415929182 |
940 | N>S | No |
ClinGen TOPMed |
|
|
CA128372734 rs958247947 |
941 | S>G | No |
ClinGen Ensembl |
|
|
CA128372735 rs17855798 |
941 | S>N | No |
ClinGen Ensembl |
|
|
COSM1434122 COSM1434119 CA3454585 COSM1434134 COSM1434133 COSM1434130 COSM1434131 COSM1434125 COSM1434126 COSM1434124 COSM1434127 COSM1434129 COSM1434121 COSM1434120 COSM1434123 rs199928168 COSM1434128 COSM1434132 |
942 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA361271405 rs1301104421 |
943 | T>A | No |
ClinGen TOPMed |
|
|
CA361271440 rs1554262572 |
944 | D>E | No |
ClinGen gnomAD |
|
|
CA361271462 rs1463725058 |
945 | N>Y | No |
ClinGen TOPMed |
No associated diseases with Q9Y5H9
10 regional properties for Q9Y5H9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Cadherin-like | 21 - 133 | IPR002126-1 |
| domain | Cadherin-like | 139 - 242 | IPR002126-2 |
| domain | Cadherin-like | 242 - 350 | IPR002126-3 |
| domain | Cadherin-like | 351 - 565 | IPR002126-4 |
| domain | Cadherin-like | 588 - 678 | IPR002126-5 |
| domain | Cadherin, N-terminal | 30 - 111 | IPR013164 |
| conserved_site | Cadherin conserved site | 230 - 240 | IPR020894-1 |
| conserved_site | Cadherin conserved site | 443 - 453 | IPR020894-2 |
| conserved_site | Cadherin conserved site | 553 - 563 | IPR020894-3 |
| domain | Cadherin, C-terminal catenin-binding domain | 798 - 931 | IPR031904 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium ion binding | Binding to a calcium ion (Ca2+). |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cell adhesion | The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
| homophilic cell adhesion via plasma membrane adhesion molecules | The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell. |
| nervous system development | The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. |
45 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q3SWX5 | CDH6 | Cadherin-6 | Bos taurus (Bovine) | PR |
| P79995 | CDH10 | Cadherin-10 | Gallus gallus (Chicken) | PR |
| Q8UVJ7 | CDHR1 | Cadherin-related family member 1 | Gallus gallus (Chicken) | PR |
| Q5DRC8 | PCDHB6 | Protocadherin beta-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE4 | PCDHA8 | Protocadherin alpha-8 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE6 | PCDHA6 | Protocadherin alpha-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE7 | PCDHA5 | Protocadherin alpha-5 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF0 | PCDHA2 | Protocadherin alpha-2 | Pan troglodytes (Chimpanzee) | PR |
| Q9VJB6 | CadN2 | Putative neural-cadherin 2 | Drosophila melanogaster (Fruit fly) | PR |
| Q9ULB4 | CDH9 | Cadherin-9 | Homo sapiens (Human) | PR |
| P12830 | CDH1 | Cadherin-1 | Homo sapiens (Human) | PR |
| Q9H159 | CDH19 | Cadherin-19 | Homo sapiens (Human) | PR |
| Q9Y6N8 | CDH10 | Cadherin-10 | Homo sapiens (Human) | PR |
| P55285 | CDH6 | Cadherin-6 | Homo sapiens (Human) | PR |
| P19022 | CDH2 | Cadherin-2 | Homo sapiens (Human) | PR |
| Q6ZTQ4 | CDHR3 | Cadherin-related family member 3 | Homo sapiens (Human) | PR |
| Q9BZA8 | PCDH11Y | Protocadherin-11 Y-linked | Homo sapiens (Human) | PR |
| Q08174 | PCDH1 | Protocadherin-1 | Homo sapiens (Human) | PR |
| Q9HC56 | PCDH9 | Protocadherin-9 | Homo sapiens (Human) | PR |
| Q9P2E7 | PCDH10 | Protocadherin-10 | Homo sapiens (Human) | PR |
| Q9Y5H8 | PCDHA3 | Protocadherin alpha-3 | Homo sapiens (Human) | PR |
| Q9UN75 | PCDHA12 | Protocadherin alpha-12 | Homo sapiens (Human) | PR |
| Q9Y5I2 | PCDHA10 | Protocadherin alpha-10 | Homo sapiens (Human) | PR |
| Q9UN72 | PCDHA7 | Protocadherin alpha-7 | Homo sapiens (Human) | PR |
| Q9UN74 | PCDHA4 | Protocadherin alpha-4 | Homo sapiens (Human) | PR |
| Q9Y5I1 | PCDHA11 | Protocadherin alpha-11 | Homo sapiens (Human) | PR |
| Q9Y5H7 | PCDHA5 | Protocadherin alpha-5 | Homo sapiens (Human) | PR |
| Q9UN73 | PCDHA6 | Protocadherin alpha-6 | Homo sapiens (Human) | PR |
| Q9Y5H6 | PCDHA8 | Protocadherin alpha-8 | Homo sapiens (Human) | PR |
| Q9Y5I3 | PCDHA1 | Protocadherin alpha-1 | Homo sapiens (Human) | PR |
| Q9Y5H3 | PCDHGA10 | Protocadherin gamma-A10 | Homo sapiens (Human) | PR |
| O60330 | PCDHGA12 | Protocadherin gamma-A12 | Homo sapiens (Human) | PR |
| Q9Y5G4 | PCDHGA9 | Protocadherin gamma-A9 | Homo sapiens (Human) | PR |
| Q9Y5G0 | PCDHGB5 | Protocadherin gamma-B5 | Homo sapiens (Human) | PR |
| Q9Y5E3 | PCDHB6 | Protocadherin beta-6 | Homo sapiens (Human) | PR |
| Q9Y5F1 | PCDHB12 | Protocadherin beta-12 | Homo sapiens (Human) | PR |
| P09803 | Cdh1 | Cadherin-1 | Mus musculus (Mouse) | PR |
| P15116 | Cdh2 | Cadherin-2 | Mus musculus (Mouse) | PR |
| P70407 | Cdh9 | Cadherin-9 | Mus musculus (Mouse) | PR |
| P97326 | Cdh6 | Cadherin-6 | Mus musculus (Mouse) | PR |
| P70408 | Cdh10 | Cadherin-10 | Mus musculus (Mouse) | PR |
| Q8VHF2 | Cdhr5 | Cadherin-related family member 5 | Mus musculus (Mouse) | PR |
| P55280 | Cdh6 | Cadherin-6 | Rattus norvegicus (Rat) | PR |
| Q9Z1Y3 | Cdh2 | Cadherin-2 | Rattus norvegicus (Rat) | PR |
| Q767I8 | Pcdha4 | Protocadherin alpha-4 | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MASSIRRGRG | AWTRLLSLLL | LAAWEVGSGQ | LRYSVPEEAK | HGTFVGRIAQ | DLGLELEELV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PRLFRVASKR | HGDLLEVNLQ | NGILFVNSRI | DREELCGRSA | ECSIHVEVIV | DRPLQVFHVE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VEVKDINDNP | PIFPMTVKTI | RFPESRLLDS | RFPLEGASDA | DIGVNALLSY | KLSSSEFFFL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DIQANDELSE | SLSLVLGKSL | DREETAEVNL | LLVATDGGKP | ELTGTVQILI | KVLDVNDNEP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TFAQSVYKVK | LLENTANGTL | VVKLNASDAD | EGPNSEIVYS | LGSDVSSTIQ | TKFTIDPISG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EIRTKGKLDY | EEAKSYEIQV | TATDKGTPSM | SGHCKISLKL | VDINDNTPEV | SITSLSLPIS |
| 370 | 380 | 390 | 400 | 410 | 420 |
| ENASLGTVIA | LITVSDRDSG | TNGHVTCSLT | PHVPFKLVST | FKNYYSLVLD | SALDRESVSA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YELVVTARDG | GSPSLWATTS | VSIEVADVND | NAPAFAQPEY | TVFVKENNPP | GCHIFTVSAW |
| 490 | 500 | 510 | 520 | 530 | 540 |
| DADAQENALV | SYSLVERRVG | ERALSSYVSV | HAESGKVYAL | QPLDHEEVEL | LQFQVSARDA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GVPPLGSNVT | LQVFVLDEND | NAPALLAPRA | GTAAGAVSEL | VPWSVGAGHV | VAKVRAVDAD |
| 610 | 620 | 630 | 640 | 650 | 660 |
| SGYNAWLSYE | LQLGTGSARI | PFRVGLYTGE | ISTTRALDEA | DSPRHRLLVL | VKDHGEPALT |
| 670 | 680 | 690 | 700 | 710 | 720 |
| ATATVLVSLV | ESGQAPKASS | RAWVGAAGSE | ATLVDVNVYL | IIAICAVSSL | LVLTVLLYTA |
| 730 | 740 | 750 | 760 | 770 | 780 |
| LRCSVPPTEG | ARAPGKPTLV | CSSAVGSWSY | SQQRRQRVCS | GEDPPKTDLM | AFSPSLSQGP |
| 790 | 800 | 810 | 820 | 830 | 840 |
| DSAEEKQLSE | SEYVGKPRQP | NPDWRYSASL | RAGMHSSVHL | EEAGILRAGP | GGPDQQWPTV |
| 850 | 860 | 870 | 880 | 890 | 900 |
| SSATPEPEAG | EVSPPVGAGV | NSNSWTFKYG | PGNPKQSGPG | ELPDKFIIPG | SPAIISIRQE |
| 910 | 920 | 930 | 940 | ||
| PTNSQIDKSD | FITFGKKEET | KKKKKKKKGN | KTQEKKEKGN | STTDNSDQ |