Q9Y5I2
Gene name |
PCDHA10 (CNRS8) |
Protein name |
Protocadherin alpha-10 |
Names |
PCDH-alpha-10 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:56139 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9Y5I2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9Y5I2-F1 | Predicted | AlphaFoldDB |
992 variants for Q9Y5I2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA174669 COSM205093 COSM462064 RCV000149260 rs193920994 |
389 | T>M | lung cervix Malignant tumor of prostate Variant assessed as Somatic; 0.0 impact. large_intestine prostate [Cosmic, ClinVar, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA dbSNP gnomAD |
|
RCV000508600 CA3454461 rs150254638 |
805 | R>H | Hirschsprung disease, susceptibility to, 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA3450841 rs782444703 |
2 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782444703 CA3450840 |
2 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361297834 rs1486914006 |
4 | R>I | No |
ClinGen TOPMed |
|
|
rs782207999 CA3450842 |
5 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA361297916 rs149846721 |
7 | C>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs533914587 CA3450844 |
8 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs369328632 CA3450845 |
9 | G>R | No |
ClinGen ESP ExAC TOPMed |
|
| TCGA novel | 10 | V>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781798552 CA128373249 |
12 | C>R | No |
ClinGen TOPMed |
|
|
CA361298012 rs1554148156 |
13 | L>P | No |
ClinGen gnomAD |
|
|
rs1383515995 CA361298049 |
15 | L>F | No |
ClinGen TOPMed |
|
|
rs782183125 CA3450851 |
18 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA361298140 rs1554148182 |
19 | L>V | No |
ClinGen gnomAD |
|
|
CA361298156 rs1562504289 |
20 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1177053165 CA361298171 |
21 | A>E | No |
ClinGen TOPMed |
|
|
COSM1130899 COSM1130900 rs781975666 CA3450854 |
21 | A>T | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3450855 rs782115498 |
22 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 22 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361298175 rs782115498 |
22 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 23 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3450856 rs782797869 |
23 | W>S | No |
ClinGen ExAC gnomAD |
|
|
COSM262757 rs782167466 CA3450858 |
24 | E>D | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs782020835 CA3450857 |
24 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 24 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 25 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554148229 CA361298281 |
27 | S>N | No |
ClinGen gnomAD |
|
|
CA3450862 rs149039484 CA3450861 |
27 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3450863 rs201064172 |
28 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781872854 CA3450864 |
30 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA3450865 rs782672623 |
31 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs782449893 CA3450867 |
32 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361298348 rs1554148241 |
32 | Y>D | No |
ClinGen gnomAD |
|
|
rs782602500 CA3450868 |
33 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs782007386 CA3450871 |
34 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361298417 rs1554148270 |
35 | Y>* | No |
ClinGen gnomAD |
|
|
CA361298402 rs1554148266 |
35 | Y>C | No |
ClinGen gnomAD |
|
|
CA361298399 rs1554148266 |
35 | Y>S | No |
ClinGen gnomAD |
|
|
rs533990024 CA3450873 |
36 | E>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3450872 rs147800828 |
36 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3450874 rs781924604 |
38 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA361298505 rs1554148289 |
39 | R>K | No |
ClinGen gnomAD |
|
|
CA3450876 rs141221498 |
40 | H>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1562505427 CA361298525 |
40 | H>Y | No |
ClinGen Ensembl |
|
|
rs200441286 CA128373378 |
41 | G>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361298538 rs200441286 |
41 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200441286 CA3450878 |
41 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3450879 rs782775861 |
42 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs782775861 CA361298554 |
42 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs200004763 CA128373398 |
43 | F>L | No |
ClinGen 1000Genomes |
|
|
CA3450880 rs138092357 |
43 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782159422 CA3450881 |
43 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs782689818 CA361298575 |
44 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs782689818 CA3450882 |
44 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs781803033 CA3450883 |
45 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs781803033 CA3450884 |
45 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA3450885 rs782636519 |
46 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1554148335 CA361298612 |
46 | R>H | No |
ClinGen gnomAD |
|
|
rs782636519 CA361298603 |
46 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs781874204 CA3450886 |
47 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 48 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM3409837 CA3450887 COSM3409838 rs773891459 |
48 | A>V | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA128373425 rs941778432 |
49 | Q>* | No |
ClinGen Ensembl |
|
|
rs1299614347 CA361298673 |
49 | Q>R | No |
ClinGen TOPMed |
|
|
CA3450889 rs782182532 |
50 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA361298709 rs1463727286 |
51 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA361298712 rs1463727286 |
51 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3450891 rs150172685 |
52 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3450894 rs556174610 |
54 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA128373438 rs374070531 |
55 | L>V | No |
ClinGen Ensembl |
|
|
CA3450895 rs781995878 |
56 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781995878 CA361298773 |
56 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782417138 CA3450897 |
59 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA361298828 rs1254513889 |
60 | Q>E | No |
ClinGen TOPMed |
|
|
CA3450898 rs149352769 |
60 | Q>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1062268 COSM1062267 rs17844338 CA361298855 |
61 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs17844338 CA361298854 |
61 | R>G | No |
ClinGen gnomAD |
|
|
CA128373443 rs17844339 |
61 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361298859 rs17844339 |
61 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA128373442 rs17844338 |
61 | R>S | No |
ClinGen gnomAD |
|
| TCGA novel | 64 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1250461159 CA361298898 |
64 | R>W | No |
ClinGen TOPMed |
|
|
rs1202551683 CA361298921 |
65 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs782062442 CA3450899 |
66 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 68 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3450901 rs545226629 |
69 | R>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361298970 rs545226629 |
69 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 69 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361298979 rs1554148458 |
69 | R>T | No |
ClinGen gnomAD |
|
|
CA3450904 rs199529084 |
71 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782445424 CA3450905 |
71 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs199529084 CA3450903 |
71 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361299038 rs1309055685 |
72 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361299050 rs1581394564 |
73 | L>P | No |
ClinGen Ensembl |
|
|
rs367902357 CA3450907 |
74 | L>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782472888 CA3450908 |
75 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361299068 rs782472888 |
75 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554148476 CA361299134 |
77 | N>K | No |
ClinGen gnomAD |
|
|
rs1428005980 CA361299131 |
77 | N>S | No |
ClinGen TOPMed |
|
|
rs782635462 CA3450909 |
78 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1164216826 CA361299165 |
79 | Q>P | No |
ClinGen TOPMed |
|
|
rs143002904 CA3450911 |
81 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3450910 rs138367057 |
81 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs143002904 CA3450912 |
81 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782180138 CA3450913 |
82 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782114957 CA3450916 |
86 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA128373483 rs782323132 |
86 | N>S | No |
ClinGen Ensembl |
|
| TCGA novel | 88 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3450917 rs782387382 |
88 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs200204071 CA3450921 |
90 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3450922 rs782092511 |
91 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA3450924 rs781846770 |
92 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1353633021 CA361299404 |
93 | E>K | No |
ClinGen TOPMed |
|
|
CA361299462 rs1262477114 |
96 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
COSM1541934 CA3450928 COSM1541935 rs781903292 |
97 | R>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3450927 rs781903292 |
97 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782782390 CA3450926 |
97 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1554148561 CA361299498 |
98 | S>G | No |
ClinGen gnomAD |
|
|
rs782584293 CA3450929 |
98 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782584293 CA361299500 |
98 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361299510 rs1286159283 |
98 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs782335067 CA3450930 |
99 | V>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs199611545 CA128373538 |
100 | E>A | No |
ClinGen TOPMed |
|
|
rs199611545 CA361299540 |
100 | E>V | No |
ClinGen TOPMed |
|
|
CA361299583 rs1404888364 |
102 | S>I | No |
ClinGen TOPMed |
|
|
CA3450931 rs782497272 |
103 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs782497272 CA361299605 |
103 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs782661319 CA3450932 |
106 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782430101 CA361299696 |
108 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128373543 rs568319142 |
109 | V>E | No |
ClinGen Ensembl |
|
|
CA3450935 rs781914523 |
109 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA361299736 rs1554148611 |
110 | D>E | No |
ClinGen gnomAD |
|
|
rs1053203263 CA128373552 |
112 | P>Q | No |
ClinGen gnomAD |
|
|
CA361299795 rs1554148624 |
114 | Q>R | No |
ClinGen gnomAD |
|
|
CA361299811 rs1554148627 |
115 | V>I | No |
ClinGen gnomAD |
|
|
rs782124565 CA3450939 |
116 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361299851 rs1554148635 |
117 | H>P | No |
ClinGen gnomAD |
|
|
rs782023286 CA3450941 |
117 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782776522 CA3450940 |
117 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782164641 CA3450942 |
118 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128373558 rs782447462 |
119 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs782709201 COSM1062272 COSM1062271 CA3450943 |
120 | V>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1263156096 CA361299917 |
121 | E>Q | No |
ClinGen TOPMed |
|
|
rs199720508 CA128373567 |
122 | V>A | No |
ClinGen Ensembl |
|
|
CA3450945 rs782470045 |
124 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782470045 CA3450946 |
124 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554148675 CA361300006 |
125 | I>F | No |
ClinGen gnomAD |
|
|
CA3450947 rs200722492 |
126 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377709063 CA128373581 |
126 | N>K | No |
ClinGen ESP TOPMed |
|
|
CA3450949 rs782670614 |
127 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782109045 CA3450948 |
127 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361300044 rs782109045 |
127 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3450950 rs782173275 |
128 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA3450952 rs551569829 |
129 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs551569829 CA3450953 |
129 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 132 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554148741 CA361300163 |
134 | V>A | No |
ClinGen Ensembl |
|
|
rs782383115 CA3450955 |
134 | V>L | No |
ClinGen ExAC |
|
|
rs782213392 CA128373622 |
135 | T>A | No |
ClinGen Ensembl |
|
|
rs1383276232 CA361300206 |
137 | Q>* | No |
ClinGen TOPMed |
|
|
rs782279735 CA3450957 |
139 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs782438318 CA3450958 |
141 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA361300277 rs868928248 |
141 | I>V | No |
ClinGen TOPMed |
|
|
CA361300303 rs1471191080 |
142 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361300304 rs1554148759 |
143 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs954604818 CA128373649 |
145 | R>G | No |
ClinGen Ensembl |
|
|
rs1430387773 CA361300341 |
145 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361300357 rs1554148765 |
146 | L>P | No |
ClinGen gnomAD |
|
|
rs1171656977 CA361300364 |
147 | L>V | No |
ClinGen TOPMed |
|
|
rs781922775 CA3450959 |
148 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA361300419 rs782069130 |
150 | R>L | No |
ClinGen ExAC TOPMed |
|
|
CA3450960 rs782069130 |
150 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
|
CA3450962 rs371158035 |
151 | F>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1193359159 CA361300499 |
154 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1554148790 CA361300502 |
155 | G>S | No |
ClinGen gnomAD |
|
|
CA3450966 rs781905206 |
155 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA128373695 rs781942781 |
156 | A>S | No |
ClinGen Ensembl |
|
|
rs374162485 CA3450968 |
157 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361300596 rs1246166621 |
159 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361300588 rs1554148798 |
159 | A>T | No |
ClinGen gnomAD |
|
|
CA361300601 rs1461628453 |
160 | D>Y | No |
ClinGen TOPMed |
|
|
rs1277596666 CA361300644 |
162 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3450969 rs182448614 |
162 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782543512 CA3450973 COSM3826985 CA3450974 COSM3826986 |
163 | E>D | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3450972 rs781878255 |
163 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs782625131 CA3450971 |
163 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA361300676 rs1554148838 |
164 | N>K | No |
ClinGen gnomAD |
|
|
CA3450975 rs782181557 |
164 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554148841 CA361300688 |
165 | A>S | No |
ClinGen gnomAD |
|
|
CA361300680 rs1554148841 |
165 | A>T | No |
ClinGen gnomAD |
|
|
rs1229307542 CA361300693 |
165 | A>V | No |
ClinGen TOPMed |
|
|
rs1319185539 CA361300755 |
169 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
CA3450976 rs372031038 CA3450977 |
170 | K>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361300790 rs782226001 |
171 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782375648 CA3450979 |
171 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA3450978 rs782226001 |
171 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361300811 rs1554148859 |
172 | S>N | No |
ClinGen gnomAD |
|
|
rs201902460 CA3450980 |
172 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361300842 rs1554148862 |
174 | N>Y | No |
ClinGen gnomAD |
|
|
rs782165615 CA3450981 |
175 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361300862 rs1554148868 |
175 | E>Q | No |
ClinGen gnomAD |
|
|
CA361300887 rs1448391443 |
176 | Y>* | No |
ClinGen TOPMed |
|
|
CA361300914 rs1554148885 |
178 | V>A | No |
ClinGen gnomAD |
|
|
CA3450982 rs537848812 |
178 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1185371115 CA361300940 |
180 | D>N | No |
ClinGen TOPMed |
|
|
CA361300984 rs1554148896 |
181 | I>M | No |
ClinGen gnomAD |
|
|
rs782731502 CA3450986 |
182 | I>K | No |
ClinGen ExAC gnomAD |
|
|
rs782076669 CA3450985 |
182 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361301043 rs1554148909 |
184 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs200468399 CA3450988 COSM3381112 COSM3381113 |
186 | D>H | pancreas [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed |
| TCGA novel | 186 | D>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361301124 rs782134319 |
188 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782801357 CA3450990 |
188 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA3450989 rs782134319 |
188 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3450991 rs781909908 |
189 | K>I | No |
ClinGen ExAC gnomAD |
|
|
rs1554148924 CA361301159 |
190 | F>V | No |
ClinGen gnomAD |
|
|
rs981734320 CA128373729 |
193 | L>I | No |
ClinGen Ensembl |
|
|
CA3450993 rs782588371 |
194 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3450992 rs782445037 |
194 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1341590061 CA361301277 |
196 | R>Q | No |
ClinGen TOPMed |
|
|
rs1554148950 CA361301321 |
198 | L>R | No |
ClinGen gnomAD |
|
|
rs371868883 CA3450995 |
201 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361301399 rs1554148959 |
203 | E>* | No |
ClinGen gnomAD |
|
|
rs782626089 CA3450996 |
206 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA3450999 rs782417357 |
209 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs782337552 CA3451002 |
213 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs782337552 CA3451003 |
213 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1554148983 CA361301633 |
214 | T>A | No |
ClinGen gnomAD |
|
|
CA361301695 rs1554148991 |
217 | G>D | No |
ClinGen gnomAD |
|
|
CA361301735 rs1413055800 |
219 | P>S | No |
ClinGen TOPMed |
|
|
rs554030052 CA3451005 |
220 | E>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361301814 rs1233191211 |
223 | G>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1233191211 CA361301810 |
223 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA361301822 rs1482820775 |
223 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1043107454 CA128373771 |
225 | V>I | No |
ClinGen Ensembl |
|
|
rs782022822 CA3451009 |
227 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3451007 rs782794939 |
227 | L>R | No |
ClinGen ExAC |
|
| TCGA novel | 228 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs369958206 CA3451010 |
230 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3451011 rs17844341 |
232 | L>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA128373799 rs996216348 |
233 | D>G | No |
ClinGen Ensembl |
|
|
rs146132566 CA3451012 |
234 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361301966 rs1554149050 |
235 | N>D | No |
ClinGen gnomAD |
|
|
CA3451013 rs201595428 |
235 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs536378352 CA3451015 |
236 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361303104 rs1562513958 |
236 | D>V | No |
ClinGen Ensembl |
|
|
CA3451017 rs148775418 |
237 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377564040 CA3451019 |
238 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377564040 CA3451020 |
238 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781789539 CA3451018 |
238 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs377564040 CA361303140 |
238 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1004781576 CA128373820 |
239 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs782226484 CA3451021 |
239 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs782497691 CA3451022 |
241 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361303210 rs782634261 |
243 | R>I | No |
ClinGen ExAC gnomAD |
|
|
CA3451023 rs782634261 |
243 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA361303222 rs1554149103 |
244 | P>L | No |
ClinGen gnomAD |
|
|
CA3451024 rs782280474 |
244 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs374159724 CA3451025 |
249 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781924329 CA3451026 |
250 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361303313 rs116416365 |
250 | M>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451027 rs116416365 |
250 | M>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782347816 CA3451029 |
252 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA3451030 rs782347816 |
252 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1554149136 CA361303365 |
254 | Q>E | No |
ClinGen gnomAD |
|
|
rs782118456 CA3451031 |
254 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361303384 rs1158226302 |
255 | V>A | No |
ClinGen TOPMed |
|
|
CA361303397 rs1471486955 |
256 | N>S | No |
ClinGen TOPMed |
|
|
CA361303409 rs1249945409 |
257 | Q>* | No |
ClinGen TOPMed |
|
|
CA361303429 rs1554149155 |
258 | T>R | No |
ClinGen gnomAD |
|
|
rs782049467 CA3451035 |
259 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1554149171 CA361303433 |
259 | L>S | No |
ClinGen gnomAD |
|
|
CA361303442 rs1201833720 |
260 | V>A | No |
ClinGen TOPMed |
|
|
rs370105926 CA3451036 |
260 | V>I | No |
ClinGen ESP ExAC gnomAD |
|
|
CA361303452 rs1554149191 |
261 | I>T | No |
ClinGen gnomAD |
|
|
rs781823533 CA3451037 |
261 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554149194 CA361303461 |
262 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361303484 rs1246162498 |
264 | N>S | No |
ClinGen TOPMed |
|
|
rs781868199 CA3451041 |
265 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781868199 CA3451040 |
265 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782696740 CA3451042 |
265 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361303515 rs1327483649 |
267 | D>E | No |
ClinGen TOPMed |
|
| TCGA novel | 267 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA128373888 rs140022509 COSM110040 |
268 | S>L | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA361303520 rs200165258 |
268 | S>P | No |
ClinGen Ensembl |
|
|
rs1386939569 CA361303526 |
269 | D>H | No |
ClinGen TOPMed |
|
| TCGA novel | 270 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554149232 CA361303572 |
273 | N>K | No |
ClinGen gnomAD |
|
|
rs1554149241 CA361303593 |
275 | E>D | No |
ClinGen gnomAD |
|
|
rs1554149238 CA361303590 |
275 | E>G | No |
ClinGen gnomAD |
|
|
rs1554149244 TCGA novel CA361303605 |
276 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen gnomAD |
|
rs782182859 CA3451043 |
276 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs969097575 COSM271448 CA128373900 |
278 | Y>C | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA3451046 rs782469336 |
281 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361303666 rs1432277991 |
281 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs267600397 CA128373906 |
282 | S>F | No |
ClinGen Ensembl |
|
| TCGA novel | 286 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361303719 rs1319775845 |
287 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
rs782378927 CA3451049 |
288 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361303733 rs1554149290 |
289 | R>K | No |
ClinGen gnomAD |
|
|
rs782649806 CA3451050 |
290 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs1554149295 CA361303755 |
291 | K>I | No |
ClinGen gnomAD |
|
|
CA361303761 rs1178891192 |
292 | F>Y | No |
ClinGen TOPMed |
|
|
CA3451051 rs782283116 |
293 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA361303790 rs1554149303 |
295 | N>K | No |
ClinGen gnomAD |
|
|
rs1554149306 CA361303797 |
296 | E>G | No |
ClinGen gnomAD |
|
|
rs1554149308 CA361303810 |
297 | R>S | No |
ClinGen gnomAD |
|
|
rs782304851 CA361303814 |
298 | T>K | No |
ClinGen ExAC gnomAD |
|
|
COSM3826988 CA3451053 rs782304851 COSM272042 |
298 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361303821 rs1424566635 |
299 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1433920847 CA361303816 |
299 | G>R | No |
ClinGen TOPMed |
|
|
rs1486886568 CA361303827 |
300 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
CA3451055 rs372611675 |
300 | E>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA361303829 rs1486886568 |
300 | E>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 302 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451057 rs781976306 |
303 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs782354826 CA3451056 |
303 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1554149344 CA361303871 |
305 | D>H | No |
ClinGen gnomAD |
|
|
CA128373967 rs374996136 |
307 | I>T | No |
ClinGen Ensembl |
|
|
rs782128989 CA3451058 |
307 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3451059 rs782790207 |
308 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361303909 rs1554149355 |
309 | F>L | No |
ClinGen gnomAD |
|
|
CA128373969 rs913394686 |
310 | E>D | No |
ClinGen Ensembl |
|
|
rs576037609 CA3451060 |
312 | S>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1463839145 CA361303954 |
313 | N>D | No |
ClinGen TOPMed |
|
|
CA361303963 rs144244943 |
313 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554149390 CA361303972 |
314 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3451062 rs781903903 |
315 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201643490 CA3451064 |
315 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361304007 rs1215860604 |
318 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA361304012 rs1554149409 |
319 | V>G | No |
ClinGen gnomAD |
|
|
rs74982530 CA3451065 |
319 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1365266931 CA361304013 |
320 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs782647115 CA3451066 |
321 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1319836535 CA361304030 |
322 | T>A | No |
ClinGen TOPMed |
|
|
CA361304044 rs1554149440 |
324 | K>E | No |
ClinGen gnomAD |
|
|
rs782539359 CA3451068 |
328 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA361304075 rs782539359 |
328 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs370499942 CA3451067 |
328 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1358871197 CA361304082 |
329 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs374158544 CA3451069 |
329 | M>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1303154996 CA361304078 |
329 | M>V | No |
ClinGen TOPMed |
|
|
rs1174179572 CA361304087 |
330 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
CA3451071 rs201811819 |
332 | H>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA3451070 rs147770909 |
332 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM3826993 rs1390810771 COSM3826992 CA361304115 |
334 | T>M | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
| TCGA novel | 335 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361304147 rs1448127309 |
340 | L>M | No |
ClinGen TOPMed |
|
|
rs1245365064 CA361304151 |
340 | L>R | No |
ClinGen TOPMed |
|
|
CA3451074 rs782238591 |
342 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs782381292 CA3451075 |
343 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs782010117 CA3451076 |
343 | N>T | No |
ClinGen ExAC gnomAD |
|
|
rs782160195 CA3451077 |
344 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451078 rs782316831 |
347 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451079 rs781941290 |
349 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554149523 CA361304208 |
349 | V>L | No |
ClinGen gnomAD |
|
|
rs782084085 CA3451080 |
350 | I>T | No |
ClinGen ExAC |
|
|
CA3451081 rs782765383 |
351 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1562518295 CA361304236 |
354 | L>V | No |
ClinGen Ensembl |
|
|
CA3451083 rs782131761 |
356 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451084 rs141258804 |
357 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1296144895 CA361304253 |
357 | P>S | No |
ClinGen TOPMed |
|
| TCGA novel | 358 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451085 rs781904873 |
359 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA361304282 rs1554149562 |
361 | D>V | No |
ClinGen gnomAD |
|
|
rs1554149565 CA361304287 |
362 | A>S | No |
ClinGen gnomAD |
|
|
CA361304292 rs868969318 |
363 | Q>* | No |
ClinGen Ensembl |
|
|
rs1554149566 CA361304303 |
364 | V>A | No |
ClinGen gnomAD |
|
|
rs1554149566 CA361304302 |
364 | V>E | No |
ClinGen gnomAD |
|
|
CA3451086 rs782455438 |
365 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs145115378 CA361304317 |
367 | V>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451087 COSM736169 rs145115378 COSM736170 |
367 | V>I | lung endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3451088 rs147581214 |
369 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361304332 rs147581214 |
369 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361304337 rs1371246447 |
370 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs782653443 CA3451090 |
371 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA3451091 CA361304350 rs782269515 |
372 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554149611 CA361304354 |
373 | V>D | No |
ClinGen gnomAD |
|
|
rs1554149609 CA361304351 |
373 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3451092 rs199584063 |
374 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs149086377 CA3451093 |
376 | H>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs149086377 CA3451094 |
376 | H>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361304373 rs149086377 |
376 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3451095 rs782349051 |
377 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361304380 rs782349051 |
377 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451097 rs781971977 |
379 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs202051639 CA128374047 |
380 | A>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA gnomAD |
|
rs782390373 CA3451099 |
380 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs202051639 CA361304397 |
380 | A>V | No |
ClinGen 1000Genomes gnomAD |
|
|
CA3451100 rs782018937 |
381 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA361304402 rs1554149645 |
381 | N>K | No |
ClinGen gnomAD |
|
|
CA3451101 rs782160902 |
381 | N>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 382 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1219541 CA361304405 rs1581433906 COSM1219540 |
382 | G>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA3451102 rs560343247 |
385 | T>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3451104 rs202111737 |
386 | C>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554149670 CA361304439 |
387 | S>C | No |
ClinGen gnomAD |
|
|
rs374547664 CA3451105 |
387 | S>P | No |
ClinGen ESP ExAC TOPMed |
|
|
CA361304460 rs1554149674 |
391 | H>P | No |
ClinGen gnomAD |
|
|
rs146953582 CA3451106 |
391 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs373834853 CA128374101 |
392 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
CA361304465 rs373834853 |
392 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1554149683 CA361304470 |
393 | P>A | No |
ClinGen gnomAD |
|
|
rs1266010631 CA361304474 |
393 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1266010631 CA361304472 |
393 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs781784109 CA361304494 |
396 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs192745808 CA3451111 |
399 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs140390466 CA3451112 |
400 | Y>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554149715 CA361304529 |
401 | K>N | No |
ClinGen gnomAD |
|
|
CA361304534 rs1554149722 |
402 | N>S | No |
ClinGen gnomAD |
|
|
CA361304539 rs1307623486 |
403 | Y>H | No |
ClinGen TOPMed |
|
|
CA128374111 rs969366268 |
405 | S>* | No |
ClinGen Ensembl |
|
|
CA3451113 rs145652579 |
405 | S>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554149751 CA361304569 |
407 | V>A | No |
ClinGen gnomAD |
|
|
rs1457787239 CA361304565 |
407 | V>M | No |
ClinGen TOPMed |
|
|
rs1473120345 CA361304583 |
409 | D>E | No |
ClinGen TOPMed |
|
| TCGA novel | 409 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA128374134 rs541123870 |
410 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1554149759 CA361304584 |
410 | S>R | No |
ClinGen TOPMed |
|
| TCGA novel | 411 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM482107 CA3451118 COSM482108 rs782434219 |
411 | A>S | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA361304593 rs782434219 |
411 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361304599 rs1554149780 |
412 | L>V | No |
ClinGen gnomAD |
|
|
CA361304611 rs782208845 |
414 | R>G | No |
ClinGen ExAC TOPMed |
|
|
CA3451122 rs782361309 |
414 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782361309 CA361304614 |
414 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA3451120 COSM736167 COSM736168 rs782208845 |
414 | R>S | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed |
|
CA3451125 rs782789358 |
416 | R>M | No |
ClinGen ExAC gnomAD |
|
|
rs138197407 CA3451127 |
419 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782722148 CA3451128 |
420 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361304656 rs781828328 |
421 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs911975248 CA128374153 |
421 | E>D | No |
ClinGen Ensembl |
|
|
rs781828328 CA3451129 |
421 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA361304654 rs1287991839 |
421 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1562521184 CA361304668 |
423 | V>A | No |
ClinGen Ensembl |
|
|
rs200630375 CA3451133 |
426 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554149849 CA361304687 |
427 | R>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3451134 rs782673935 |
427 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA361304698 rs782461373 |
428 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361304695 rs1554149861 |
428 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 428 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200210897 CA3451137 CA3451138 |
429 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs995138526 CA128374170 |
430 | G>D | No |
ClinGen Ensembl |
|
|
rs782392001 CA3451139 |
431 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs782392001 CA361304711 |
431 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782392001 CA361304712 |
431 | S>W | No |
ClinGen ExAC gnomAD |
|
|
CA3451141 rs565903992 |
432 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782309251 CA3451142 |
433 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA361304720 rs1554149884 |
433 | P>S | No |
ClinGen gnomAD |
|
|
CA361304734 rs1197611806 |
435 | W>* | No |
ClinGen TOPMed |
|
|
CA361304738 rs1449369579 |
436 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361304737 rs1449369579 |
436 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs782141581 CA3451147 |
437 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA361304755 rs1209229228 |
439 | S>G | No |
ClinGen TOPMed |
|
|
CA361304759 rs1464300143 |
439 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA3451150 VAR_048535 CA3451149 rs251362 |
439 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD UniProt dbSNP |
|
|
rs1347476888 CA361304784 |
443 | E>D | No |
ClinGen TOPMed |
|
|
rs1554149916 CA361304778 |
443 | E>K | No |
ClinGen gnomAD |
|
|
rs1232678115 CA361304792 |
445 | A>T | No |
ClinGen TOPMed |
|
|
rs782509093 CA3451153 |
446 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1300471931 CA361304803 |
446 | D>V | No |
ClinGen TOPMed |
|
|
rs369919324 CA3451154 CA3451155 |
447 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361304805 rs369919324 COSM1062284 COSM1062283 |
447 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3451157 rs142727326 |
448 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs146099067 CA3451158 |
449 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs146099067 CA3451159 |
449 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782631166 CA3451160 COSM116346 |
450 | N>K | ovary [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1554149957 CA361304824 |
450 | N>Y | No |
ClinGen gnomAD |
|
|
rs375062704 CA361304830 |
451 | A>P | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA361304831 rs375062704 |
451 | A>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA361304829 rs375062704 |
451 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
|
CA3451163 rs782020024 |
452 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA3451168 rs782751627 |
455 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA361304857 rs782751627 |
455 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 458 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451169 rs781871079 |
460 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361304892 rs781871079 |
460 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361304893 rs781871079 |
460 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs953563882 CA128374261 |
462 | F>I | No |
ClinGen Ensembl |
|
|
rs912006741 CA128374267 |
463 | V>M | No |
ClinGen gnomAD |
|
|
rs1554150035 CA361304916 |
464 | K>R | No |
ClinGen gnomAD |
|
|
CA361304924 rs1554150038 |
465 | E>G | No |
ClinGen gnomAD |
|
|
CA361304920 rs1554150037 |
465 | E>K | No |
ClinGen gnomAD |
|
|
CA3451171 rs144782261 |
466 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3451172 rs781784518 |
467 | N>T | No |
ClinGen ExAC |
|
|
rs782451627 CA3451173 |
468 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs545328956 CA361304948 |
469 | P>S | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs545328956 CA128374288 |
469 | P>T | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1581448736 CA361304956 |
470 | G>A | No |
ClinGen Ensembl |
|
| TCGA novel | 470 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1562523612 CA361304963 |
471 | C>F | No |
ClinGen Ensembl |
|
|
rs148598290 CA3451180 |
472 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3451179 rs782545869 |
472 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA3451178 rs782280236 |
472 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 473 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451181 rs782202072 |
477 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs1562523780 CA361305000 |
477 | S>T | No |
ClinGen Ensembl |
|
|
CA361305006 rs1554150087 |
478 | A>E | No |
ClinGen gnomAD |
|
|
CA361305007 rs1554150087 |
478 | A>G | No |
ClinGen gnomAD |
|
|
rs1554150101 CA361305013 |
479 | W>C | No |
ClinGen gnomAD |
|
|
CA361305012 rs1044921765 |
479 | W>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3451183 rs781790244 |
479 | W>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA128374316 rs1044921765 |
479 | W>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361305022 CA3451184 rs782255025 |
480 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554150104 CA361305016 |
480 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361305023 rs1168742927 |
481 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1554150112 CA361305026 |
481 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs189056024 CA3451186 |
482 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1388292827 CA361305029 |
482 | D>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 485 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361305054 rs1554150134 |
485 | E>G | No |
ClinGen Ensembl |
|
|
rs1554150129 CA361305051 |
485 | E>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 486 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1187112079 CA361305062 |
486 | N>S | No |
ClinGen TOPMed |
|
|
rs782043318 CA3451187 |
487 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361305074 rs1554150153 |
488 | L>P | No |
ClinGen gnomAD |
|
|
rs781950263 CA3451189 |
489 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs782094851 CA3451190 |
491 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361305115 rs1554150171 |
494 | V>A | No |
ClinGen gnomAD |
|
|
CA361305134 rs1413308998 |
496 | R>Q | No |
ClinGen TOPMed |
|
|
rs781876036 CA3451192 |
496 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451195 rs192376340 |
497 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs192376340 CA3451194 |
497 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782605707 CA3451197 |
498 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451198 rs782244721 |
499 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1408742148 CA361305165 |
499 | G>V | No |
ClinGen TOPMed |
|
|
rs782667639 CA3451200 |
500 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554150192 CA361305167 |
500 | E>K | No |
ClinGen gnomAD |
|
|
CA361305180 rs1554150197 |
501 | R>G | No |
ClinGen gnomAD |
|
|
rs782300527 CA361305185 |
501 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782300527 CA3451202 |
501 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451204 rs782203645 |
502 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781993692 CA3451206 |
503 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451207 rs782138602 |
504 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs550275293 CA3451208 |
504 | S>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3451209 rs782037850 |
505 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1254291079 CA361305234 |
506 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs139473255 CA3451210 |
507 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 507 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782707848 CA3451211 |
508 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782707848 CA361305256 COSM1310662 COSM1310663 |
508 | S>L | upper_aerodigestive_tract Variant assessed as Somatic; 0.0 impact. urinary_tract [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs782707848 CA3451212 |
508 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361305264 rs1452756689 |
509 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
CA3451214 rs142356019 |
509 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782567056 CA3451217 |
511 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs782552455 CA3451216 |
511 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 512 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 513 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361305318 rs1554150286 |
514 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1554150286 CA361305320 |
514 | G>V | No |
ClinGen gnomAD |
|
|
CA361305331 CA3451221 rs782606088 |
515 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3451219 rs782473553 |
515 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554150300 CA361305335 |
516 | V>L | No |
ClinGen gnomAD |
|
|
rs782398517 CA361305365 |
518 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782398517 CA3451222 |
518 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361305378 rs1294714828 |
519 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs565842920 CA3451225 |
520 | Q>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1436552212 CA361305401 |
521 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1554150364 CA361305436 |
524 | H>P | No |
ClinGen gnomAD |
|
|
rs782083775 CA3451227 |
524 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554150390 CA361305459 |
525 | E>D | No |
ClinGen gnomAD |
|
|
CA128374434 rs962164938 |
525 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1554150395 CA361305486 |
528 | E>K | No |
ClinGen gnomAD |
|
|
rs972522376 CA128374439 |
530 | L>P | No |
ClinGen Ensembl |
|
|
rs1554150415 CA361305528 |
531 | Q>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1193059751 CA361305545 |
532 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3451232 rs781790360 |
532 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1406049950 CA361305541 |
532 | F>S | No |
ClinGen TOPMed |
|
|
rs782060988 CA3451233 |
533 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782724813 CA3451234 |
534 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451235 rs781834004 |
535 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1466552947 CA361305581 |
535 | S>R | No |
ClinGen TOPMed |
|
|
CA3451236 rs782490979 |
536 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554150444 CA361305585 |
536 | A>T | No |
ClinGen gnomAD |
|
|
CA361305595 rs1207727837 |
537 | R>C | No |
ClinGen TOPMed |
|
|
COSM3428995 CA128374457 rs17844344 |
537 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA3451237 rs17844344 |
537 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782577621 CA3451241 |
538 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361305605 rs368920437 |
538 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3451239 rs368920437 |
538 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA128374478 COSM336806 rs201104305 |
539 | G>A | lung kidney Variant assessed as Somatic; 0.0 impact. urinary_tract central_nervous_system [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA3451242 rs377441915 |
539 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375722457 CA3451244 |
540 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3451243 rs375722457 |
540 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361305633 rs1581464132 |
541 | V>E | No |
ClinGen Ensembl |
|
|
CA128374490 rs926570494 |
541 | V>M | No |
ClinGen Ensembl |
|
|
rs372854727 CA3451246 |
542 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372854727 CA3451245 |
542 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1178476676 CA361305655 |
543 | P>L | No |
ClinGen TOPMed |
|
|
CA361305650 rs1343696069 |
543 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1554150504 CA361305657 |
544 | L>V | No |
ClinGen gnomAD |
|
|
rs1554150517 CA361305673 |
545 | G>V | No |
ClinGen gnomAD |
|
|
rs189067845 CA361305706 |
548 | L>* | No |
ClinGen 1000Genomes TOPMed |
|
|
rs189067845 CA361305703 |
548 | L>S | No |
ClinGen 1000Genomes TOPMed |
|
|
CA3451250 rs184684054 |
548 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361305704 rs189067845 |
548 | L>W | No |
ClinGen 1000Genomes TOPMed |
|
|
rs1554150531 CA361305716 |
549 | T>K | No |
ClinGen gnomAD |
|
|
rs1554150531 CA361305719 |
549 | T>R | No |
ClinGen gnomAD |
|
|
CA361305730 rs1554150537 |
551 | Q>* | No |
ClinGen gnomAD |
|
|
CA3451251 rs782327503 |
552 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554150547 CA361305765 |
554 | V>L | No |
ClinGen gnomAD |
|
|
CA3451252 rs781941638 |
555 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA361305800 rs139533789 |
556 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs781995177 CA3451255 |
557 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs782771327 CA361305803 |
557 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782771327 CA3451254 |
557 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451257 CA3451258 rs371525843 |
558 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1277501257 CA361305830 |
559 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA3451260 rs782731784 |
559 | D>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 559 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781841380 CA3451261 |
560 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782671299 CA3451263 |
561 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA3451262 rs782508750 |
561 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554150585 CA361305872 |
563 | A>E | No |
ClinGen gnomAD |
|
|
rs782288464 CA3451264 |
563 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs782288464 CA361305866 |
563 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361305882 rs1380363248 |
564 | L>R | No |
ClinGen TOPMed |
|
|
rs375305711 CA3451266 |
565 | L>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs375305711 CA361305886 |
565 | L>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782206343 CA3451267 |
566 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA361305892 rs1374937613 |
566 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3451268 rs782353510 |
567 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3451270 rs781977975 |
568 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451269 rs781977975 |
568 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782054220 CA3451273 |
569 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451275 rs782736508 |
570 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782736508 CA3451274 |
570 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782102895 CA3451276 COSM3409842 |
572 | A>V | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
| TCGA novel | 573 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374400381 COSM1541925 CA3451279 |
573 | G>S | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA128374556 rs926604630 |
574 | G>C | No |
ClinGen gnomAD |
|
|
CA361305970 rs926604630 |
574 | G>R | No |
ClinGen gnomAD |
|
|
rs1554150651 CA361305984 |
575 | A>G | No |
ClinGen gnomAD |
|
|
CA361305988 rs1554150651 |
575 | A>V | No |
ClinGen gnomAD |
|
|
rs554890390 CA3451281 |
576 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3451283 rs782611887 |
579 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3451287 rs782663646 |
582 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA3451286 rs782663646 |
582 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs368399538 CA3451285 |
582 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361306787 rs1554150678 |
583 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361306799 rs1554150681 |
584 | V>E | No |
ClinGen gnomAD |
|
| TCGA novel | 584 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451289 VAR_048536 rs251364 |
585 | V>G | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1311256758 CA361306829 |
586 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1311256758 CA361306832 COSM482109 |
586 | A>V | kidney prostate [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1411794040 CA361306853 |
588 | H>Y | No |
ClinGen TOPMed |
|
|
rs17844346 CA3451290 |
589 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781991402 CA3451292 |
590 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs782420102 CA3451294 |
593 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA3451295 rs781917564 |
594 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554150713 COSM1433995 CA361306939 |
595 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA128374583 rs903622049 |
595 | A>V | No |
ClinGen Ensembl |
|
|
rs781828595 CA3451298 |
598 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3451301 rs782775653 |
600 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA3451300 rs782107328 |
600 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA3451303 COSM1719878 rs782556733 |
601 | G>R | NS [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA3451304 rs782574851 |
602 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361307046 rs1554150749 |
602 | Y>H | No |
ClinGen gnomAD |
|
|
CA361307072 rs1415276512 |
603 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3451305 rs781810921 |
604 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554150765 CA361307089 |
604 | A>V | No |
ClinGen gnomAD |
|
|
CA128374613 rs890760526 |
605 | W>R | No |
ClinGen Ensembl |
|
| TCGA novel | 606 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782242383 CA3451308 |
607 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA3451310 COSM1719880 rs782670114 |
609 | E>K | NS [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs782327077 CA3451312 |
612 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA3451313 rs782327077 |
612 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA3451315 rs782362061 |
615 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA3451317 rs373881159 |
616 | G>D | No |
ClinGen ESP ExAC gnomAD |
|
|
CA361307286 rs1554150821 |
618 | R>C | No |
ClinGen gnomAD |
|
|
rs782807567 CA3451318 |
618 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs1554150826 CA361307296 |
619 | I>L | No |
ClinGen gnomAD |
|
|
CA3451319 rs781796196 |
619 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA361307318 rs1250345336 |
620 | P>L | No |
ClinGen TOPMed |
|
|
rs1554150840 CA361307330 |
621 | F>L | No |
ClinGen gnomAD |
|
|
CA361307358 rs1489456152 |
622 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs559667430 CA128374639 |
622 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA gnomAD |
|
CA361307364 rs1265955881 COSM1433996 |
623 | V>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA361307393 rs1243844248 |
624 | G>W | No |
ClinGen TOPMed |
|
|
rs1554150855 CA361307400 |
625 | L>M | No |
ClinGen gnomAD |
|
|
CA3451323 rs782519535 |
625 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs782519535 CA361307402 |
625 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA361307419 rs1351185942 |
626 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1291686886 CA361307413 |
626 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1291686886 CA361307416 |
626 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
CA361307406 rs1332380211 |
626 | Y>H | No |
ClinGen TOPMed |
|
|
CA128374643 rs529968685 |
627 | T>K | No |
ClinGen 1000Genomes gnomAD |
|
|
CA361307437 COSM3776287 rs529968685 |
627 | T>M | urinary_tract [Cosmic] | No |
ClinGen cosmic curated 1000Genomes gnomAD |
|
CA361307426 rs1554150876 |
627 | T>P | No |
ClinGen gnomAD |
|
|
rs1581479966 CA361307442 |
628 | G>C | No |
ClinGen Ensembl |
|
|
rs1554150890 CA361307451 |
629 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361307472 rs1554150893 |
630 | I>V | No |
ClinGen gnomAD |
|
|
CA128374646 rs898070295 |
631 | S>I | No |
ClinGen Ensembl |
|
|
rs782648009 CA3451324 |
632 | T>M | No |
ClinGen ExAC gnomAD |
|
|
CA361307511 rs1392688299 |
633 | T>A | No |
ClinGen TOPMed |
|
|
CA361307514 rs1554150906 |
633 | T>K | No |
ClinGen gnomAD |
|
|
CA361307522 rs1160932490 |
634 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
COSM1062297 rs1554150927 CA361307530 |
634 | R>H | endometrium [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA361307524 rs1160932490 |
634 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs569786768 CA361307539 |
635 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs569786768 CA3451327 |
635 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1179131182 CA361307585 |
638 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs630162 CA3451328 VAR_048537 |
639 | T>A | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA361307611 rs630162 |
639 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1212933789 CA361307631 |
640 | D>H | No |
ClinGen TOPMed |
|
|
CA3451331 rs782641512 |
641 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782641512 CA3451330 |
641 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs114376757 CA3451332 |
642 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451334 rs782181380 |
643 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361307692 rs782181380 |
643 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377577023 CA361307741 |
645 | R>C | No |
ClinGen ESP TOPMed |
|
|
rs377577023 CA128374663 |
645 | R>G | No |
ClinGen ESP TOPMed |
|
|
rs782329809 CA3451336 |
645 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782329809 CA3451335 |
645 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361307762 rs1554150982 |
646 | L>P | No |
ClinGen gnomAD |
|
|
CA361307766 rs1562532129 |
647 | L>M | No |
ClinGen Ensembl |
|
|
CA3451338 rs370495338 |
647 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361307772 rs370495338 |
647 | L>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554150990 CA361307789 |
648 | V>E | No |
ClinGen gnomAD |
|
|
rs570220982 CA3451339 |
648 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782150278 CA3451340 |
649 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs782820218 CA361307834 |
652 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA3451341 rs782820218 |
652 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA361307870 rs1383838363 |
653 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA3451342 rs373238139 |
654 | G>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA3451343 rs782468153 |
655 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554151014 CA361307892 |
655 | E>V | No |
ClinGen gnomAD |
|
|
CA3451345 rs781847343 |
656 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs782738271 CA3451344 |
656 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1562532510 CA361307920 |
657 | S>W | No |
ClinGen Ensembl |
|
|
rs782656168 CA3451347 |
659 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451348 rs534379807 |
661 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361307995 rs1249815194 |
662 | A>V | No |
ClinGen TOPMed |
|
|
CA3451351 rs782597618 |
664 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA361308024 rs1446194845 |
665 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA361308031 rs1446194845 |
665 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
CA361308037 rs1283856648 |
666 | V>M | No |
ClinGen TOPMed |
|
|
CA361308060 rs1203574330 |
667 | S>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1203574330 CA361308062 |
667 | S>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1233644213 CA361308081 |
669 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs781982906 CA3451354 |
670 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3451356 rs17844348 |
671 | G>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3451355 rs200045353 |
671 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3451357 rs200661444 |
673 | Q>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA128374712 rs576753961 |
674 | A>T | No |
ClinGen 1000Genomes |
|
|
CA3451358 rs782061637 |
675 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782716439 CA3451360 |
676 | K>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451359 rs782716439 |
676 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 677 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451361 rs782110139 |
677 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA361308217 rs782778779 |
678 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782778779 CA3451362 |
678 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781886260 CA3451363 |
679 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA361308238 rs782702941 |
680 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782702941 CA3451365 |
680 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554151138 CA361308235 |
680 | R>W | No |
ClinGen gnomAD |
|
|
CA3451367 rs782483771 |
685 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782612207 CA3451368 |
686 | A>V | No |
ClinGen ExAC |
|
|
CA361308321 rs781859966 |
687 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451369 rs781859966 |
687 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451371 rs782673373 |
688 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA361308328 rs782673373 COSM1062299 |
688 | E>K | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1581491002 CA361308354 |
689 | V>G | No |
ClinGen Ensembl |
|
|
rs1191323415 CA361308367 |
690 | A>D | No |
ClinGen TOPMed |
|
|
CA3451372 COSM1062300 rs140097524 |
690 | A>T | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
CA3451373 rs782310474 |
691 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1444406371 CA361308377 |
691 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1554151191 CA361308393 |
692 | V>E | No |
ClinGen gnomAD |
|
|
rs1258479453 CA361308419 |
694 | V>D | No |
ClinGen TOPMed |
|
|
CA3451376 rs782090771 |
694 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1554151203 CA361308441 |
695 | N>K | No |
ClinGen gnomAD |
|
|
rs781998170 CA3451377 |
695 | N>S | No |
ClinGen ExAC TOPMed |
|
|
rs1215623176 CA361308452 |
696 | V>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1215623176 CA361308456 |
696 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1277423393 CA361308450 |
696 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361308445 rs1277423393 |
696 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs577433161 CA3451378 |
697 | Y>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361308481 rs1247420166 |
698 | L>P | No |
ClinGen TOPMed |
|
|
CA128374757 rs782394316 |
698 | L>V | No |
ClinGen Ensembl |
|
|
CA3451380 rs781919234 |
699 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA128374762 rs993741287 |
699 | I>T | No |
ClinGen Ensembl |
|
|
rs782725386 CA3451382 |
701 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451383 rs781842183 |
702 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs782113419 CA3451384 |
703 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 703 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451387 rs781899082 |
704 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781899082 CA3451386 |
704 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451388 rs782574934 |
704 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1409243603 CA361308571 |
705 | V>M | No |
ClinGen TOPMed |
|
|
rs782491809 CA3451390 |
709 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA361308675 rs1417282608 |
712 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs782680459 CA3451394 |
717 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361308745 rs1418909754 |
717 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA361308788 rs781984728 |
720 | R>G | No |
ClinGen gnomAD |
|
|
rs781984728 CA128374796 |
720 | R>W | No |
ClinGen gnomAD |
|
|
CA361308801 rs1554151274 |
721 | C>S | No |
ClinGen gnomAD |
|
|
rs1205846373 CA361308831 |
722 | S>L | No |
ClinGen TOPMed |
|
|
rs1554151287 CA361308836 |
723 | A>T | No |
ClinGen gnomAD |
|
|
CA361308865 COSM448813 rs1554151292 |
724 | A>V | breast [Cosmic] | No |
ClinGen cosmic curated gnomAD |
| TCGA novel | 727 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451400 rs782000026 |
727 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361308895 rs782000026 |
727 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451401 rs782153266 |
729 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128374804 rs1014024880 |
729 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361308941 rs782153266 |
729 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554151322 CA361308974 |
732 | P>A | No |
ClinGen gnomAD |
|
|
rs781796341 CA3451403 |
732 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA3451404 rs781796341 |
732 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA3451406 rs782165070 |
734 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554151333 CA361309031 |
735 | P>H | No |
ClinGen gnomAD |
|
|
CA361309039 rs1325415176 |
736 | T>A | No |
ClinGen TOPMed |
|
|
CA3451407 rs782505724 |
736 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs782801879 CA361309080 |
738 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA3451408 rs782801879 |
738 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs781901851 CA3451409 |
739 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs367651349 CA3451412 |
741 | S>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554151358 CA361309115 |
741 | S>N | No |
ClinGen gnomAD |
|
|
rs374506056 CA3451414 |
742 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1231696084 CA361309151 |
743 | V>A | No |
ClinGen TOPMed |
|
|
CA3451417 rs782040852 |
745 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361309274 rs782040852 |
745 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451418 rs782182754 |
746 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA3451419 rs369786229 |
746 | W>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781955598 CA3451420 |
748 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451421 rs782112368 |
748 | Y>S | No |
ClinGen ExAC |
|
|
rs1212201302 CA361309374 |
749 | S>A | No |
ClinGen TOPMed |
|
|
CA3451422 rs551967990 |
749 | S>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782690239 CA3451425 |
753 | R>G | No |
ClinGen ExAC |
|
|
COSM1062301 rs1554151408 CA361309470 |
753 | R>Q | lung large_intestine endometrium [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1276572732 CA361309494 |
754 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3451426 rs781800844 |
755 | R>S | No |
ClinGen ExAC |
|
|
rs1581503195 CA361309528 |
756 | V>G | No |
ClinGen Ensembl |
|
|
CA361309541 rs1554151418 |
757 | C>R | No |
ClinGen gnomAD |
|
|
rs1441459097 CA361309555 |
757 | C>Y | No |
ClinGen TOPMed |
|
|
CA361309720 rs1323713253 |
764 | K>E | No |
ClinGen TOPMed |
|
|
rs528199752 CA128374859 |
765 | A>V | No |
ClinGen 1000Genomes gnomAD |
|
|
CA3451434 rs782668038 |
766 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451433 rs371621182 |
766 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1160044351 CA361309801 |
768 | M>L | No |
ClinGen TOPMed |
|
|
CA3451437 rs782580844 |
769 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782457995 CA3451436 |
769 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3451438 rs782216764 |
770 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs943751481 CA128374875 |
771 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA3451439 rs782369682 |
771 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361309870 rs782369682 |
771 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361309903 rs1455132420 |
773 | S>G | No |
ClinGen TOPMed |
|
|
CA361309976 rs1252920038 |
776 | P>L | No |
ClinGen TOPMed |
|
| TCGA novel | 778 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451442 rs782413045 |
779 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451441 rs181849631 |
779 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361310052 rs1260966424 |
780 | V>A | No |
ClinGen TOPMed |
|
| TCGA novel | 780 | V>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361310069 rs1214576702 |
781 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361310139 CA361310143 rs185971380 |
784 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs185971380 CA3451444 |
784 | G>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361310172 rs1554151554 |
785 | E>D | No |
ClinGen gnomAD |
|
|
CA3451445 rs782740609 |
787 | Q>H | No |
ClinGen ExAC |
|
|
rs150984635 CA3451448 |
789 | I>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs150984635 CA3451447 |
789 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1301119075 CA361310249 |
790 | G>* | No |
ClinGen TOPMed |
|
|
CA361310244 rs1301119075 |
790 | G>R | No |
ClinGen TOPMed |
|
|
rs550257645 CA3451450 |
792 | D>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3451451 rs373682195 |
793 | H>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361310296 rs373682195 |
793 | H>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361310320 rs1554151596 |
794 | S>C | No |
ClinGen gnomAD |
|
|
rs782697989 CA3451452 |
796 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs781811192 CA361310365 |
796 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs782073950 CA3454452 |
797 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA361259520 rs1490306705 |
797 | P>S | No |
ClinGen TOPMed |
|
|
rs374951627 CA3454453 |
798 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781913955 CA3454454 |
798 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA3454455 rs781913955 |
798 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782109224 CA3454458 |
803 | D>H | No |
ClinGen ExAC |
|
|
COSM3696815 COSM3696819 COSM3696826 COSM3696817 CA3454459 COSM3696814 COSM3696822 COSM3696816 COSM3696828 COSM3696812 COSM3696820 rs782774245 COSM3696813 COSM3696823 COSM3696825 COSM3696821 COSM3696827 COSM3696818 COSM3696824 |
804 | W>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361259640 rs782774245 |
804 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA3454460 rs141879545 |
805 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454463 rs781815387 |
808 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138901709 CA3454464 |
809 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782686641 CA3454465 |
810 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1363421000 CA361259736 |
811 | R>I | No |
ClinGen TOPMed |
|
|
rs1586790986 CA361259751 |
812 | A>G | No |
ClinGen Ensembl |
|
|
CA3454466 rs782253140 |
813 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454467 rs782336746 |
814 | M>V | No |
ClinGen ExAC |
|
|
CA361259787 rs1554240128 |
815 | H>N | No |
ClinGen gnomAD |
|
|
rs149397164 CA3454468 |
816 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782426631 CA3454484 |
817 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782587733 CA3454485 |
817 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs782426631 CA361260538 |
817 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1181664726 CA361260559 |
818 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361260577 rs1554244276 |
819 | H>P | No |
ClinGen gnomAD |
|
|
COSM1062442 COSM1062448 COSM1062450 rs782273708 COSM1062445 COSM1062454 COSM1062455 COSM1062443 COSM1062452 COSM1062456 COSM1062457 COSM1062451 COSM1062453 COSM1062449 COSM1062447 CA3454486 COSM1062444 |
819 | H>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3454488 rs782634646 |
821 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454487 rs782419098 |
821 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs147537783 CA3454489 |
822 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs981642614 CA128362369 |
823 | A>T | No |
ClinGen Ensembl |
|
|
rs782347331 CA3454490 |
824 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260711 rs1468199443 |
825 | I>V | No |
ClinGen TOPMed |
|
|
rs555523473 CA3454493 |
827 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139355257 CA3454492 |
827 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782025005 CA3454494 |
829 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260802 rs1278779763 |
830 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3454495 rs201991205 |
832 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454497 rs201572428 |
834 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3454496 rs782766562 |
834 | D>V | No |
ClinGen ExAC |
|
|
rs1554244431 CA361260933 |
836 | Q>R | No |
ClinGen gnomAD |
|
|
CA3454498 rs782094765 |
837 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454499 RCV000950135 rs79247475 |
838 | P>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA128362405 rs369053351 |
838 | P>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1554244455 CA361260996 |
839 | T>A | No |
ClinGen gnomAD |
|
|
CA3454501 rs782544627 |
840 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454502 rs577838197 |
842 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454504 rs781852534 |
842 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs781852534 CA3454503 |
842 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs782605920 CA3454505 |
842 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs199851685 CA3454506 |
844 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454507 rs782437404 |
845 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs560422677 CA3454508 |
845 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs560422677 CA3454509 |
845 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361261129 rs782437404 |
845 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782179145 CA3454531 |
846 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454532 rs782321757 |
849 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554262240 CA361268348 |
851 | E>G | No |
ClinGen gnomAD |
|
|
rs781996586 CA3454536 |
857 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1179266 rs782079089 COSM1179264 COSM1179272 COSM1179273 COSM1179269 COSM1179270 COSM1179277 COSM1179268 COSM1179263 COSM1179271 COSM1179278 COSM1179275 COSM1179276 COSM1179265 CA3454537 COSM1179267 COSM1179274 |
858 | A>V | lung prostate [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1588246273 CA361268557 |
860 | V>G | No |
ClinGen Ensembl |
|
|
CA3454540 rs782068657 |
860 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1563727066 CA361268679 |
864 | S>N | No |
ClinGen Ensembl |
|
|
COSM139598 COSM139601 COSM139604 COSM139606 COSM139609 COSM139603 COSM139600 COSM139611 COSM139608 rs1554262287 COSM139599 COSM139607 COSM139602 COSM139605 COSM139610 CA361268865 |
870 | G>E | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs900919931 CA128372514 |
870 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1554262289 CA361268920 |
872 | G>D | No |
ClinGen gnomAD |
|
|
CA3454542 rs575518914 |
874 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175529844 CA361268995 |
875 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3454543 rs782119637 |
877 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454546 rs552954748 |
878 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552954748 CA3454545 |
878 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs373683237 CA3454547 |
879 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1486746921 CA361269173 |
880 | G>S | No |
ClinGen TOPMed |
|
|
CA128372547 rs1057913 |
884 | D>A | No |
ClinGen Ensembl |
|
|
rs371269236 CA3454551 |
884 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454552 rs782334415 |
885 | K>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454553 rs782623559 |
888 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3454555 rs782328874 |
889 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454556 rs200822345 |
890 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454559 rs782009776 |
894 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142720081 CA361269729 |
894 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3454558 rs142720081 |
894 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782087059 CA3454560 |
895 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1289763016 CA361269834 |
897 | I>V | No |
ClinGen TOPMed |
|
|
rs760426957 CA3454562 |
898 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1166265 COSM1166271 COSM1166266 COSM1166268 COSM1166267 COSM1166273 COSM1166276 COSM1166277 COSM1166272 COSM1166264 COSM1166279 rs147351924 CA3454561 COSM1166275 COSM1166269 COSM1166278 COSM1166270 COSM1166274 |
898 | R>W | large_intestine haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA361269875 rs1554262408 |
899 | Q>K | No |
ClinGen gnomAD |
|
|
CA361269953 rs1554262420 |
901 | P>A | No |
ClinGen gnomAD |
|
|
CA361269962 rs1359138927 |
901 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1314860754 CA361269972 |
902 | T>A | No |
ClinGen TOPMed |
|
|
CA361270002 rs1554262437 |
903 | N>K | No |
ClinGen TOPMed |
|
|
CA3454564 rs148436868 |
904 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554262456 CA361270119 |
906 | I>T | No |
ClinGen gnomAD |
|
|
rs781853535 CA3454565 |
906 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529364872 CA128372646 |
907 | D>E | No |
ClinGen Ensembl |
|
|
CA3454567 rs142570778 |
907 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128372638 rs782057926 |
907 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3454568 rs781835321 |
908 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs782451974 CA3454569 |
911 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3454570 rs782578873 |
913 | T>I | No |
ClinGen ExAC |
|
|
rs782274123 CA3454571 |
914 | F>S | No |
ClinGen ExAC gnomAD |
|
|
COSM216699 COSM216705 CA3454573 COSM216710 rs782642898 COSM1158471 COSM216696 COSM216700 COSM216702 COSM216709 COSM216704 COSM216698 COSM216697 COSM216706 COSM216707 COSM216701 COSM216703 COSM216708 |
915 | G>S | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454574 rs782270689 |
917 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs782270689 CA361270554 |
917 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1259591783 CA361270565 |
918 | E>Q | No |
ClinGen TOPMed |
|
|
CA361270593 rs1554262487 |
919 | E>D | No |
ClinGen gnomAD |
|
|
CA3454575 rs782348993 |
920 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs781972089 CA3454577 |
921 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554262492 CA361270633 |
921 | K>R | No |
ClinGen gnomAD |
|
|
rs374660085 CA3454578 |
926 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361270828 rs1554262513 |
927 | K>R | No |
ClinGen gnomAD |
|
|
CA3454579 rs782413551 |
928 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782413551 CA361270853 |
928 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307653192 CA361270984 |
931 | K>N | No |
ClinGen TOPMed |
|
|
CA128372721 rs184181976 |
931 | K>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
rs1554262529 CA361271070 |
934 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782776948 CA3454583 |
936 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3454584 rs781954349 |
939 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361271296 rs1295693430 |
940 | N>D | No |
ClinGen TOPMed |
|
|
rs1554262551 CA361271322 |
940 | N>K | No |
ClinGen gnomAD |
|
|
CA361271306 rs1415929182 |
940 | N>S | No |
ClinGen TOPMed |
|
|
CA128372734 rs958247947 |
941 | S>G | No |
ClinGen Ensembl |
|
|
CA128372735 rs17855798 |
941 | S>N | No |
ClinGen Ensembl |
|
|
COSM1434122 COSM1434119 CA3454585 COSM1434134 COSM1434133 COSM1434130 COSM1434131 COSM1434125 COSM1434126 COSM1434124 COSM1434127 COSM1434129 COSM1434121 COSM1434120 COSM1434123 rs199928168 COSM1434128 COSM1434132 |
942 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA361271405 rs1301104421 |
943 | T>A | No |
ClinGen TOPMed |
|
|
CA361271440 rs1554262572 |
944 | D>E | No |
ClinGen gnomAD |
|
|
CA361271462 rs1463725058 |
945 | N>Y | No |
ClinGen TOPMed |
No associated diseases with Q9Y5I2
11 regional properties for Q9Y5I2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Cadherin-like | 49 - 137 | IPR002126-1 |
| domain | Cadherin-like | 138 - 246 | IPR002126-2 |
| domain | Cadherin-like | 246 - 351 | IPR002126-3 |
| domain | Cadherin-like | 352 - 566 | IPR002126-4 |
| domain | Cadherin-like | 583 - 687 | IPR002126-5 |
| domain | Cadherin, N-terminal | 34 - 116 | IPR013164 |
| conserved_site | Cadherin conserved site | 234 - 244 | IPR020894-1 |
| conserved_site | Cadherin conserved site | 444 - 454 | IPR020894-2 |
| conserved_site | Cadherin conserved site | 554 - 564 | IPR020894-3 |
| domain | Cadherin, C-terminal catenin-binding domain | 815 - 936 | IPR031904 |
| domain | Cadherin, cytoplasmic C-terminal domain | 692 - 775 | IPR032455 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| extracellular region | The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. |
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium ion binding | Binding to a calcium ion (Ca2+). |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cell adhesion | The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
| homophilic cell adhesion via plasma membrane adhesion molecules | The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell. |
| nervous system development | The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. |
47 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q3SWX5 | CDH6 | Cadherin-6 | Bos taurus (Bovine) | PR |
| P79995 | CDH10 | Cadherin-10 | Gallus gallus (Chicken) | PR |
| Q8UVJ7 | CDHR1 | Cadherin-related family member 1 | Gallus gallus (Chicken) | PR |
| Q5DRC8 | PCDHB6 | Protocadherin beta-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE4 | PCDHA8 | Protocadherin alpha-8 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE6 | PCDHA6 | Protocadherin alpha-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF0 | PCDHA2 | Protocadherin alpha-2 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE7 | PCDHA5 | Protocadherin alpha-5 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF4 | PCDHA10 | Protocadherin alpha-10 | Pan troglodytes (Chimpanzee) | PR |
| Q9VJB6 | CadN2 | Putative neural-cadherin 2 | Drosophila melanogaster (Fruit fly) | PR |
| Q9ULB4 | CDH9 | Cadherin-9 | Homo sapiens (Human) | PR |
| P12830 | CDH1 | Cadherin-1 | Homo sapiens (Human) | PR |
| Q9H159 | CDH19 | Cadherin-19 | Homo sapiens (Human) | PR |
| Q9Y6N8 | CDH10 | Cadherin-10 | Homo sapiens (Human) | PR |
| P55285 | CDH6 | Cadherin-6 | Homo sapiens (Human) | PR |
| P19022 | CDH2 | Cadherin-2 | Homo sapiens (Human) | PR |
| Q6ZTQ4 | CDHR3 | Cadherin-related family member 3 | Homo sapiens (Human) | PR |
| Q9BZA8 | PCDH11Y | Protocadherin-11 Y-linked | Homo sapiens (Human) | PR |
| Q08174 | PCDH1 | Protocadherin-1 | Homo sapiens (Human) | PR |
| Q9HC56 | PCDH9 | Protocadherin-9 | Homo sapiens (Human) | PR |
| Q9P2E7 | PCDH10 | Protocadherin-10 | Homo sapiens (Human) | PR |
| Q9Y5H8 | PCDHA3 | Protocadherin alpha-3 | Homo sapiens (Human) | PR |
| Q9UN75 | PCDHA12 | Protocadherin alpha-12 | Homo sapiens (Human) | PR |
| Q9UN72 | PCDHA7 | Protocadherin alpha-7 | Homo sapiens (Human) | PR |
| Q9UN74 | PCDHA4 | Protocadherin alpha-4 | Homo sapiens (Human) | PR |
| Q9Y5I1 | PCDHA11 | Protocadherin alpha-11 | Homo sapiens (Human) | PR |
| Q9Y5H7 | PCDHA5 | Protocadherin alpha-5 | Homo sapiens (Human) | PR |
| Q9UN73 | PCDHA6 | Protocadherin alpha-6 | Homo sapiens (Human) | PR |
| Q9Y5H6 | PCDHA8 | Protocadherin alpha-8 | Homo sapiens (Human) | PR |
| Q9Y5I3 | PCDHA1 | Protocadherin alpha-1 | Homo sapiens (Human) | PR |
| Q9Y5H9 | PCDHA2 | Protocadherin alpha-2 | Homo sapiens (Human) | PR |
| Q9Y5H3 | PCDHGA10 | Protocadherin gamma-A10 | Homo sapiens (Human) | PR |
| O60330 | PCDHGA12 | Protocadherin gamma-A12 | Homo sapiens (Human) | PR |
| Q9Y5G4 | PCDHGA9 | Protocadherin gamma-A9 | Homo sapiens (Human) | PR |
| Q9Y5G0 | PCDHGB5 | Protocadherin gamma-B5 | Homo sapiens (Human) | PR |
| Q9Y5E3 | PCDHB6 | Protocadherin beta-6 | Homo sapiens (Human) | PR |
| Q9Y5F1 | PCDHB12 | Protocadherin beta-12 | Homo sapiens (Human) | PR |
| P09803 | Cdh1 | Cadherin-1 | Mus musculus (Mouse) | PR |
| P15116 | Cdh2 | Cadherin-2 | Mus musculus (Mouse) | PR |
| P70407 | Cdh9 | Cadherin-9 | Mus musculus (Mouse) | PR |
| P97326 | Cdh6 | Cadherin-6 | Mus musculus (Mouse) | PR |
| P70408 | Cdh10 | Cadherin-10 | Mus musculus (Mouse) | PR |
| Q8VHF2 | Cdhr5 | Cadherin-related family member 5 | Mus musculus (Mouse) | PR |
| Q91Y11 | Pcdha9 | Protocadherin alpha-9 | Mus musculus (Mouse) | PR |
| P55280 | Cdh6 | Cadherin-6 | Rattus norvegicus (Rat) | PR |
| Q9Z1Y3 | Cdh2 | Cadherin-2 | Rattus norvegicus (Rat) | PR |
| Q767I8 | Pcdha4 | Protocadherin alpha-4 | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MVSRCSCLGV | QCLLLSLLLL | AAWEVGSGQL | HYSVYEEARH | GTFVGRIAQD | LGLELAELVQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RLFRVASKRH | GDLLEVNLQN | GILFVNSRID | REELCGRSVE | CSIHLEVIVD | RPLQVFHVDV |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EVKDINDNPP | RFSVTEQKLS | IPESRLLDSR | FPLEGASDAD | VGENALLTYK | LSPNEYFVLD |
| 190 | 200 | 210 | 220 | 230 | 240 |
| IINKKDKDKF | PVLVLRKLLD | REENPQLKLL | LTATDGGKPE | FTGSVSLLIL | VLDANDNAPI |
| 250 | 260 | 270 | 280 | 290 | 300 |
| FDRPVYEVKM | YENQVNQTLV | IRLNASDSDE | GINKEMMYSF | SSLVPPTIRR | KFWINERTGE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| IKVNDAIDFE | DSNTYEIHVD | VTDKGNPPMV | GHCTVLVELL | DENDNSPEVI | VTSLSLPVKE |
| 370 | 380 | 390 | 400 | 410 | 420 |
| DAQVGTVIAL | ISVSDHDSGA | NGQVTCSLTP | HVPFKLVSTY | KNYYSLVLDS | ALDRERVSAY |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ELVVTARDGG | SPPLWATASV | SVEVADVNDN | APAFAQSEYT | VFVKENNPPG | CHIFTVSAWD |
| 490 | 500 | 510 | 520 | 530 | 540 |
| ADAQENALVS | YSLVERRLGE | RSLSSYVSVH | AESGKVYALQ | PLDHEELELL | QFQVSARDGG |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VPPLGSNLTL | QVFVLDENDN | APALLASPAG | SAGGAVSELV | LRSVVAGHVV | AKVRAVDADS |
| 610 | 620 | 630 | 640 | 650 | 660 |
| GYNAWLSYEL | QSAAVGARIP | FRVGLYTGEI | STTRALDETD | SPRQRLLVLV | KDHGEPSLTA |
| 670 | 680 | 690 | 700 | 710 | 720 |
| TATVLVSLVE | GSQAPKASSR | ASVGVAPEVA | LVDVNVYLII | AICAVSSLLV | LTLLLYTALR |
| 730 | 740 | 750 | 760 | 770 | 780 |
| CSAAPTEGAC | GPVKPTLVCS | SAVGSWSYSQ | QRRQRVCSGE | GLPKADLMAF | SPSLPPCPMV |
| 790 | 800 | 810 | 820 | 830 | 840 |
| DVDGEDQSIG | GDHSRKPRQP | NPDWRYSASL | RAGMHSSVHL | EEAGILRAGP | GGPDQQWPTV |
| 850 | 860 | 870 | 880 | 890 | 900 |
| SSATPEPEAG | EVSPPVGAGV | NSNSWTFKYG | PGNPKQSGPG | ELPDKFIIPG | SPAIISIRQE |
| 910 | 920 | 930 | 940 | ||
| PTNSQIDKSD | FITFGKKEET | KKKKKKKKGN | KTQEKKEKGN | STTDNSDQ |