Q9UN72
Gene name |
PCDHA7 |
Protein name |
Protocadherin alpha-7 |
Names |
PCDH-alpha-7 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:56141 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9UN72
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9UN72-F1 | Predicted | AlphaFoldDB |
1011 variants for Q9UN72
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000508600 CA3454461 rs150254638 |
794 | R>H | Hirschsprung disease, susceptibility to, 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs141534918 CA361238759 |
2 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs141534918 CA3448765 |
2 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448767 rs782266147 |
4 | P>Q | No |
ClinGen ExAC |
|
|
CA3448769 rs17844304 |
7 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs560186709 CA3448768 |
7 | Y>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs560186709 CA361238864 |
7 | Y>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3448770 rs782278654 |
8 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs369857656 CA3448772 |
9 | P>L | No |
ClinGen ESP ExAC TOPMed |
|
|
CA3448771 rs369857656 |
9 | P>R | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1422955156 CA361238892 |
9 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA361238915 rs542640548 |
10 | G>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3448773 rs542640548 |
10 | G>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361238940 rs1248577104 |
12 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA128354581 rs376771030 |
14 | L>P | No |
ClinGen Ensembl |
|
|
rs1554134171 CA361238984 |
15 | L>M | No |
ClinGen gnomAD |
|
|
rs1554134174 CA361238999 |
15 | L>P | No |
ClinGen gnomAD |
|
|
CA3448777 rs782806156 |
17 | F>I | No |
ClinGen ExAC gnomAD |
|
|
CA128354592 rs146171114 |
17 | F>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA361239032 rs1554134187 |
17 | F>S | No |
ClinGen gnomAD |
|
|
rs781815301 CA3448778 |
18 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs781815301 CA361239042 |
18 | I>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 18 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554134200 CA361239058 |
19 | I>L | No |
ClinGen gnomAD |
|
|
CA361239072 rs1554134207 |
19 | I>M | No |
ClinGen gnomAD |
|
|
rs1554134200 CA361239060 |
19 | I>V | No |
ClinGen gnomAD |
|
|
CA3448779 rs139246881 |
21 | L>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1562336302 CA361239112 |
22 | A>E | No |
ClinGen Ensembl |
|
| TCGA novel | 23 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554134220 CA361239128 |
23 | A>V | No |
ClinGen gnomAD |
|
|
CA361239147 rs1554134225 |
24 | W>* | No |
ClinGen gnomAD |
|
|
CA361239154 rs1554134227 |
25 | E>K | No |
ClinGen gnomAD |
|
|
rs561276243 CA128354622 |
25 | E>V | No |
ClinGen 1000Genomes gnomAD |
|
|
rs202125503 CA3448782 |
26 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3448781 rs781826495 |
26 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361239184 rs202125503 |
26 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361239214 rs1238997313 |
28 | R>T | No |
ClinGen TOPMed |
|
|
rs1350848206 CA361239228 |
29 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA361239265 rs1554134247 |
31 | L>F | No |
ClinGen gnomAD |
|
|
CA361239303 rs1554134254 |
32 | H>R | No |
ClinGen gnomAD |
|
|
rs1554134251 CA361239298 |
32 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782538708 CA3448785 |
33 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
CA3448787 rs782177425 |
34 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs1387248014 CA361239341 |
34 | S>P | No |
ClinGen TOPMed |
|
|
CA128354651 rs141682483 |
36 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
|
CA361239478 rs1554134283 |
39 | A>T | No |
ClinGen gnomAD |
|
|
rs532311058 CA3448794 |
40 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361239559 rs1419397208 |
41 | H>R | No |
ClinGen TOPMed |
|
|
rs781981562 CA3448795 |
41 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3448797 rs139562115 |
42 | G>S | No |
ClinGen ESP ExAC TOPMed |
|
|
rs781858636 CA3448798 |
43 | N>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361239629 rs1433865569 CA361239628 |
45 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1433865569 CA361239627 |
45 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA3448799 rs200308248 |
47 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM1061911 rs1554134295 CA361239697 |
49 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA361239721 COSM371544 rs1554134298 |
49 | A>V | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1554134303 CA361239778 |
51 | D>Y | No |
ClinGen gnomAD |
|
|
CA3448800 rs782798231 |
53 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA361239823 rs1580783721 |
54 | L>M | No |
ClinGen Ensembl |
|
|
rs1264423031 CA361239874 |
55 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA361239885 rs782435489 |
56 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554134312 CA361239891 |
57 | A>T | No |
ClinGen gnomAD |
|
|
rs782615816 CA3448803 |
57 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs781819172 CA3448804 |
58 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554134319 CA361239930 |
59 | L>V | No |
ClinGen gnomAD |
|
|
rs565756665 CA3448805 |
60 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3448807 rs376907347 |
61 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA361239963 rs376907347 |
61 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361239965 rs376907347 |
61 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782620267 CA3448806 |
61 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448809 rs782575776 |
62 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361239983 rs782575776 |
62 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA3448811 CA361240002 rs782349641 |
64 | F>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 65 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554134334 CA361240018 |
65 | R>Q | No |
ClinGen gnomAD |
|
|
rs1554134337 CA361240031 |
66 | A>S | No |
ClinGen gnomAD |
|
|
CA3448812 COSM1219608 rs782011323 |
66 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs782242416 CA361240051 |
67 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782242416 CA3448813 |
67 | V>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554134344 CA361240039 |
67 | V>L | No |
ClinGen gnomAD |
|
|
rs1554134345 CA361240062 |
68 | C>S | No |
ClinGen gnomAD |
|
|
CA361240073 rs1399605083 |
69 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361240071 rs1399605083 |
69 | K>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA3448815 rs782018607 |
69 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1554134353 CA361240101 |
70 | F>C | No |
ClinGen gnomAD |
|
|
rs1554134348 CA361240091 |
70 | F>I | No |
ClinGen gnomAD |
|
|
rs1554134355 CA361240102 |
70 | F>L | No |
ClinGen gnomAD |
|
|
rs1554134348 CA361240089 |
70 | F>V | No |
ClinGen gnomAD |
|
|
CA361240109 rs1383001934 |
71 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA3448816 rs782068965 COSM1261305 |
71 | R>H | Variant assessed as Somatic; 0.0 impact. oesophagus prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA361240115 rs782068965 |
71 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361240118 COSM736317 rs1554134361 |
72 | G>R | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA361240137 rs1377152360 |
73 | D>V | No |
ClinGen TOPMed |
|
|
CA361240154 rs1554134377 |
74 | L>R | No |
ClinGen gnomAD |
|
| TCGA novel | 77 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1479128016 CA361240263 |
80 | Q>E | No |
ClinGen TOPMed |
|
|
CA361240271 rs1554134383 |
80 | Q>P | No |
ClinGen gnomAD |
|
|
rs782778140 CA3448822 |
81 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs782778140 CA3448821 COSM354454 |
81 | N>H | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA3448823 rs782535895 |
83 | I>V | No |
ClinGen ExAC |
|
|
CA3448825 rs782803575 |
85 | F>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3448826 rs781800596 |
86 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA3448827 rs17844305 |
88 | S>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1427134752 CA361240422 |
88 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1554134397 CA361240439 |
89 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782272918 CA3448829 |
90 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs782510890 CA3448831 |
92 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs782510890 CA361240496 |
92 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA361240506 rs1554134403 |
92 | R>H | No |
ClinGen gnomAD |
|
|
rs782510890 CA3448830 |
92 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1200683987 CA361240519 |
93 | E>G | No |
ClinGen TOPMed |
|
|
rs1554134406 CA361240509 |
93 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782278120 CA3448832 |
95 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361240562 rs1554134412 |
96 | C>G | No |
ClinGen gnomAD |
|
|
CA361240593 rs61730626 CA3448834 |
97 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448835 rs782226762 |
98 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs151115812 CA361240658 |
101 | E>A | No |
ClinGen 1000Genomes ESP TOPMed gnomAD |
|
|
CA3448837 rs151115812 |
101 | E>G | No |
ClinGen 1000Genomes ESP TOPMed gnomAD |
|
|
rs782110680 CA3448840 |
104 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1554134447 CA361240750 |
105 | H>Y | No |
ClinGen gnomAD |
|
|
CA361240834 rs1401581496 |
110 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs17844306 CA3448843 |
111 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM420906 rs1554134461 CA361240849 |
111 | E>K | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1401604778 CA361240881 |
112 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3448845 rs781827962 |
113 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361240899 rs781827962 |
113 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361240906 rs1187806383 |
114 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA361240931 rs1554134473 |
115 | Q>R | No |
ClinGen gnomAD |
|
|
CA361241014 rs782768797 |
118 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1422918644 CA361241025 |
119 | V>G | No |
ClinGen TOPMed |
|
|
CA3448848 rs538826701 |
119 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs374412032 CA3448849 |
120 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361241067 rs1554134480 |
121 | V>A | No |
ClinGen gnomAD |
|
|
rs1554134479 CA361241059 |
121 | V>L | No |
ClinGen gnomAD |
|
|
CA361241056 rs1554134479 |
121 | V>M | No |
ClinGen gnomAD |
|
| TCGA novel | 124 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448852 rs61730624 |
124 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361241141 rs377605550 |
125 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448853 rs377605550 |
125 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1265880924 CA361241177 |
126 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs782373517 CA3448855 |
126 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361241235 rs1245758871 |
128 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA3448857 rs782272470 |
128 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA3448860 CA361241283 rs781912893 |
129 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448858 rs782317863 |
129 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs572197976 CA3448863 |
130 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3448861 rs572197976 COSM4155499 |
130 | P>S | kidney [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA3448862 rs572197976 |
130 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs548844035 CA128355129 |
131 | P>A | No |
ClinGen Ensembl |
|
|
CA361241347 rs1328708194 |
132 | V>A | No |
ClinGen TOPMed |
|
|
CA361241335 rs1554134508 |
132 | V>M | No |
ClinGen gnomAD |
|
|
rs1554134513 CA361241360 |
133 | F>I | No |
ClinGen gnomAD |
|
|
rs370662341 CA3448865 |
134 | P>A | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 134 | P>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM117784 CA361241382 rs370662341 |
134 | P>S | ovary [Cosmic] | No |
ClinGen cosmic curated ESP ExAC gnomAD |
|
CA3448866 rs782054098 |
135 | A>E | No |
ClinGen ExAC TOPMed |
|
|
CA361241426 rs1164245907 |
136 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361241450 rs1554134520 |
137 | Q>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361241459 rs1554134523 |
137 | Q>R | No |
ClinGen gnomAD |
|
|
VAR_048527 rs10067182 CA3448868 |
138 | R>K | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs10067182 CA361241472 |
138 | R>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782512269 COSM1062088 COSM1062086 CA3448871 |
138 | R>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed |
|
CA3448869 rs10067182 |
138 | R>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 140 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 141 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448873 rs781901008 |
141 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs782528566 CA3448874 |
142 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs782579390 CA361241585 |
143 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782579390 CA3448875 |
143 | A>S | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 143 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs375091295 CA3448876 |
146 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554134538 CA361241642 |
146 | R>T | No |
ClinGen gnomAD |
|
| TCGA novel | 147 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554134539 CA361241652 |
147 | P>T | No |
ClinGen gnomAD |
|
|
COSM1310623 rs1580793449 CA361241731 |
151 | R>G | urinary_tract [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs782422719 COSM736232 CA3448880 |
153 | P>S | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554134556 CA361241825 |
155 | E>A | No |
ClinGen gnomAD |
|
|
CA361241845 rs1554134557 |
156 | G>D | No |
ClinGen gnomAD |
|
|
rs1580793932 CA361241852 |
157 | A>S | No |
ClinGen Ensembl |
|
|
CA361241885 rs1289783871 |
158 | S>A | No |
ClinGen TOPMed |
|
|
CA361241914 rs1554134568 |
160 | A>T | No |
ClinGen gnomAD |
|
|
rs781975656 CA3448884 |
160 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361241955 rs1554134575 |
161 | D>A | No |
ClinGen gnomAD |
|
|
rs1554134577 CA361241960 |
161 | D>E | No |
ClinGen gnomAD |
|
|
CA3448885 rs782077925 |
162 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3448889 rs782159713 |
166 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA361242122 rs1554134603 |
169 | T>A | No |
ClinGen gnomAD |
|
|
CA3448891 rs781799704 |
170 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361242146 rs781799704 |
170 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1404648866 CA361242154 |
171 | R>* | No |
ClinGen TOPMed |
|
|
rs1299634781 CA361242191 |
173 | S>R | No |
ClinGen TOPMed |
|
|
rs200331097 CA3448893 |
175 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361242262 rs1379120626 |
176 | E>G | No |
ClinGen TOPMed |
|
|
rs1554134625 CA361242306 |
178 | F>C | No |
ClinGen gnomAD |
|
|
CA361242316 rs1478738870 |
179 | F>L | No |
ClinGen TOPMed |
|
|
rs781880809 CA3448895 |
181 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782698612 CA3448897 |
182 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA361242397 rs1489769942 |
184 | T>P | No |
ClinGen TOPMed |
|
|
rs1219071398 CA361242424 |
185 | S>N | No |
ClinGen TOPMed |
|
|
CA361242440 rs1488766121 |
186 | N>D | No |
ClinGen TOPMed |
|
|
CA3448898 rs782281621 |
188 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA361242484 rs1283846830 |
188 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA361242563 rs1554134656 |
192 | L>P | No |
ClinGen gnomAD |
|
|
CA361242554 rs1222102897 |
192 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA361242625 rs1554134670 |
196 | L>* | No |
ClinGen gnomAD |
|
|
rs1275898995 CA361242643 |
197 | R>W | No |
ClinGen TOPMed |
|
|
CA361242682 rs1223503168 |
199 | L>V | No |
ClinGen TOPMed |
|
|
rs1280536302 CA361242698 |
200 | L>S | No |
ClinGen TOPMed |
|
|
rs868962334 CA361242691 |
200 | L>V | No |
ClinGen Ensembl |
|
|
CA361242742 rs782341738 |
201 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA361242727 rs1554134683 |
201 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 201 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 202 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs562139043 CA128355433 |
208 | L>F | No |
ClinGen gnomAD |
|
|
CA361242940 rs1344190823 |
212 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1554134692 CA361242954 |
213 | T>M | No |
ClinGen gnomAD |
|
|
rs1554134697 CA361242998 |
216 | D>N | No |
ClinGen gnomAD |
|
|
rs1554134704 CA361243051 COSM1061919 |
218 | G>D | endometrium [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
COSM1061921 CA361243093 rs1554134705 |
221 | E>K | endometrium [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA361243119 rs1175607106 |
222 | L>P | No |
ClinGen TOPMed |
|
|
CA3448904 rs782243230 |
226 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782010953 CA3448906 |
231 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs1554134731 CA361243326 |
234 | D>G | No |
ClinGen gnomAD |
|
|
rs554667660 CA128355481 |
235 | N>K | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA3448908 rs782695651 |
236 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA361243414 rs1580799239 |
237 | D>V | No |
ClinGen Ensembl |
|
|
CA3448909 rs781959460 |
238 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554134736 CA361243436 |
238 | N>T | No |
ClinGen gnomAD |
|
|
rs1322098011 CA361243468 |
239 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1322098011 CA361243479 |
239 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA361243511 rs1554134747 |
241 | V>A | No |
ClinGen gnomAD |
|
|
rs1554134747 CA361243512 |
241 | V>G | No |
ClinGen gnomAD |
|
|
rs1554134743 CA361243505 |
241 | V>M | No |
ClinGen gnomAD |
|
| TCGA novel | 243 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1219590569 CA361243651 |
247 | Y>C | No |
ClinGen TOPMed |
|
| TCGA novel | 248 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554134753 CA361243692 |
248 | T>S | No |
ClinGen gnomAD |
|
|
CA361243739 rs1554134756 |
249 | V>G | No |
ClinGen gnomAD |
|
|
CA3448911 rs782767969 |
252 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA361243792 rs782767969 |
252 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA361243831 rs1554134762 |
253 | E>D | No |
ClinGen gnomAD |
|
|
rs1361704137 CA361243823 |
253 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA361243925 rs1340549872 |
257 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1449854317 CA361243911 |
257 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1335549425 CA361243930 |
258 | G>R | No |
ClinGen TOPMed |
|
|
rs1467791579 CA361243974 |
261 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs781908748 CA3448912 |
262 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA361244102 rs1580801115 |
266 | A>V | No |
ClinGen Ensembl |
|
|
rs1171302510 CA361244116 |
267 | S>L | No |
ClinGen TOPMed |
|
|
rs1554134775 CA361244209 |
272 | G>A | No |
ClinGen gnomAD |
|
|
rs782707802 CA3448914 |
273 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1554134781 CA361244271 |
274 | N>S | No |
ClinGen gnomAD |
|
|
CA3448915 rs781791332 |
275 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA361244309 rs1184992089 |
276 | D>Y | No |
ClinGen TOPMed |
|
|
rs782482517 CA3448916 |
278 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782604670 CA3448917 |
279 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA361244378 rs782260003 |
280 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs1243799676 CA361244399 |
280 | S>F | No |
ClinGen TOPMed |
|
|
CA3448918 rs782260003 |
280 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA361244435 rs1260478265 |
282 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA361244443 rs1554134794 |
283 | S>R | No |
ClinGen gnomAD |
|
|
CA361244466 rs1199841458 |
283 | S>R | No |
ClinGen TOPMed |
|
|
rs1554134797 CA361244493 |
284 | D>E | No |
ClinGen gnomAD |
|
|
rs782680546 CA3448920 |
284 | D>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 284 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1271413656 CA361244502 |
285 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1307272356 CA361244495 |
285 | V>I | No |
ClinGen TOPMed |
|
|
CA3448921 rs782273535 |
287 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs782273535 CA361244552 |
287 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 288 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361246236 rs1313960035 |
289 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA361246228 rs1554134802 |
289 | I>T | No |
ClinGen gnomAD |
|
|
rs782318423 CA3448922 |
289 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361246286 rs1554134807 |
292 | K>R | No |
ClinGen gnomAD |
|
|
CA3448925 rs782221040 |
293 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs782337528 CA3448926 |
293 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3448928 rs781987998 |
295 | M>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448927 rs781987998 |
295 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1352513751 CA361246375 |
296 | D>E | No |
ClinGen TOPMed |
|
|
CA3448929 rs782802512 |
296 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361246380 rs1554134816 |
297 | P>T | No |
ClinGen gnomAD |
|
|
CA361246418 rs1554134823 |
298 | L>* | No |
ClinGen gnomAD |
|
|
CA3448934 rs781822523 |
300 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448932 rs782762880 |
300 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA3448933 rs781822523 |
300 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 301 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361246539 rs782760399 |
304 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs782760399 CA3448935 |
304 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA361246560 rs1554134866 |
305 | I>T | No |
ClinGen gnomAD |
|
|
CA3448936 rs781902582 |
305 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3448938 rs782537253 |
306 | G>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs367787299 CA128355648 |
306 | G>E | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs782537253 CA3448937 |
306 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs565146954 CA3448940 |
308 | M>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782605223 CA3448941 |
309 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361246685 rs1231514628 |
310 | F>S | No |
ClinGen TOPMed |
|
|
rs1554134881 CA361246761 |
313 | S>R | No |
ClinGen gnomAD |
|
|
rs1554134883 CA361246828 |
314 | R>K | No |
ClinGen gnomAD |
|
|
CA3448943 rs782246373 |
315 | A>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 315 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361246882 rs1322698790 |
316 | H>Q | No |
ClinGen TOPMed |
|
|
CA3448944 rs532372202 |
316 | H>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361246888 rs782675124 |
317 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448945 rs782675124 |
317 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1355221277 CA361246895 |
317 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
rs782206168 CA3448946 COSM1219610 |
318 | I>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA3448949 rs782084924 |
319 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs781968667 CA3448948 |
319 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 320 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3448950 rs782390485 COSM3826963 |
321 | E>K | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361247013 rs781982190 |
322 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA3448951 rs781982190 |
322 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1554134897 CA361247024 |
322 | A>V | No |
ClinGen gnomAD |
|
|
CA361247036 rs1554134902 |
323 | V>L | No |
ClinGen gnomAD |
|
|
CA361247097 rs1562344632 |
324 | D>G | No |
ClinGen Ensembl |
|
|
rs1364750635 CA361247057 |
324 | D>H | No |
ClinGen TOPMed |
|
|
CA361247132 rs1302770205 |
325 | K>E | No |
ClinGen TOPMed |
|
|
rs781809439 CA3448955 |
326 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA3448956 rs782043886 |
327 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448957 rs782753121 |
330 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA3448958 rs781816405 |
331 | A>D | No |
ClinGen ExAC |
|
|
CA361247282 rs1418607679 |
331 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1406334354 CA361247308 |
332 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1554134930 CA361247378 |
334 | C>F | No |
ClinGen gnomAD |
|
|
CA361247375 rs1554134928 |
334 | C>R | No |
ClinGen gnomAD |
|
|
rs149493398 CA361247439 |
336 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149493398 COSM448771 CA3448960 |
336 | V>L | breast [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
| TCGA novel | 337 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 337 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361247501 rs1554134939 |
338 | V>M | No |
ClinGen gnomAD |
|
|
CA361247523 rs1490610910 |
339 | E>* | No |
ClinGen TOPMed |
|
|
CA361247540 rs1562344982 |
339 | E>V | No |
ClinGen Ensembl |
|
|
rs1554134951 CA361247599 |
342 | D>G | No |
ClinGen gnomAD |
|
|
CA3448961 rs529756958 |
342 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361247605 rs1554134951 |
342 | D>V | No |
ClinGen gnomAD |
|
|
rs17844309 CA3448963 COSM149926 |
343 | V>I | stomach [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs17844309 CA361247632 |
343 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1671931 CA3448965 rs782345247 |
345 | D>N | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1554134958 CA361247686 |
345 | D>V | No |
ClinGen gnomAD |
|
|
rs782661603 CA3448966 |
346 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361247748 rs1314619067 |
347 | A>T | No |
ClinGen TOPMed |
|
|
rs1554134971 CA361247854 |
351 | T>A | No |
ClinGen gnomAD |
|
|
CA3448970 rs782068094 |
351 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs150063888 CA128355850 |
352 | L>F | No |
ClinGen TOPMed |
|
|
rs150063888 CA361247862 COSM3428985 |
352 | L>I | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs781966094 CA3448972 |
355 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3448974 COSM1736595 rs782766094 |
356 | S>C | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs781907889 CA3448975 |
357 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs369845570 CA3448977 |
359 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361248212 rs1453069564 |
363 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs141258579 CA128355893 |
364 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs1554134999 CA361248289 |
365 | P>L | No |
ClinGen gnomAD |
|
|
COSM1062094 CA361248319 rs1343566248 |
366 | G>D | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
| TCGA novel | 367 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs371322976 CA3448981 |
368 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782515502 CA3448982 |
369 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs1554135015 CA361248454 |
370 | T>P | No |
ClinGen gnomAD |
|
|
rs139807581 CA3448983 COSM589608 |
373 | S>R | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA128355902 rs530500092 |
374 | V>E | No |
ClinGen 1000Genomes gnomAD |
|
|
rs1554135018 CA361248550 |
374 | V>L | No |
ClinGen gnomAD |
|
|
CA361248564 rs1261915665 |
375 | F>I | No |
ClinGen TOPMed gnomAD |
|
|
CA3448985 rs145294768 |
376 | D>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3448986 rs147252917 |
377 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782339816 CA3448988 |
380 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554135041 CA361248810 |
381 | V>A | No |
ClinGen gnomAD |
|
|
CA361248804 rs1554135039 |
381 | V>I | No |
ClinGen gnomAD |
|
|
rs781999569 CA361248843 |
382 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1554135043 CA361248861 |
383 | G>A | No |
ClinGen gnomAD |
|
|
CA3448990 rs140697336 CA3448991 |
383 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361248925 rs1220164308 |
385 | V>L | No |
ClinGen TOPMed |
|
|
rs1554135044 CA361248952 |
386 | T>I | No |
ClinGen gnomAD |
|
|
rs568423282 CA128355934 |
387 | C>Y | No |
ClinGen Ensembl |
|
|
rs1340907598 CA361249021 |
388 | S>Y | No |
ClinGen TOPMed |
|
|
CA361249064 rs1554135048 |
389 | L>R | No |
ClinGen gnomAD |
|
|
CA3448995 COSM1197721 rs550090383 COSM1130901 |
390 | T>M | lung Variant assessed as Somatic; 0.0 impact. large_intestine urinary_tract prostate [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs782135852 CA3448996 |
391 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3448997 rs375615999 |
392 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361249107 rs1359916127 |
392 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA361249125 rs1304711365 |
393 | V>D | No |
ClinGen TOPMed |
|
|
CA3448998 rs781910299 |
393 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs1405942635 CA361249140 |
394 | P>A | No |
ClinGen TOPMed |
|
|
CA3448999 rs782525957 |
394 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449001 rs781789610 |
395 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782726291 CA3449000 |
395 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA3449002 rs782489708 |
396 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1192023261 CA361249247 |
397 | L>F | No |
ClinGen TOPMed |
|
|
CA3449003 rs782594410 |
397 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361249270 rs1426412702 |
398 | V>A | No |
ClinGen TOPMed |
|
|
rs1554135076 CA361249265 |
398 | V>L | No |
ClinGen gnomAD |
|
|
CA3449004 rs368614594 |
399 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 399 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs149764673 CA128355955 |
401 | F>Y | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs782500453 CA3449005 |
402 | K>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3449006 rs782670244 |
403 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361249410 rs1241128064 |
404 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
rs782196550 CA3449007 |
405 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs782216404 CA3449010 |
407 | L>W | No |
ClinGen ExAC gnomAD |
|
|
rs1554135105 CA361249516 |
409 | L>M | No |
ClinGen gnomAD |
|
|
CA3449011 rs782399996 |
409 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1226937699 CA361249558 |
410 | D>A | No |
ClinGen TOPMed |
|
| TCGA novel | 411 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs145763112 CA3449015 |
411 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3449014 rs782171716 |
411 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449016 rs781932037 |
412 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781932037 CA361249590 |
412 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1562347401 CA361249603 |
412 | A>V | No |
ClinGen Ensembl |
|
|
rs782043218 CA3449018 |
415 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449019 rs571592993 |
416 | E>K | No |
ClinGen 1000Genomes ExAC |
|
|
CA361249692 rs1554135135 |
417 | S>G | No |
ClinGen gnomAD |
|
|
CA3449022 rs1449740308 |
417 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA3449023 rs781821940 |
417 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361249701 rs1449740308 |
417 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1460811244 CA361249750 |
418 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1554135153 CA361249777 |
419 | S>F | No |
ClinGen gnomAD |
|
|
CA361249800 rs1554135155 |
420 | A>T | No |
ClinGen gnomAD |
|
|
rs781900508 CA3449027 |
420 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs148944886 CA361249819 |
421 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361249815 rs1554135161 |
421 | Y>C | No |
ClinGen gnomAD |
|
|
rs1554135160 CA361249811 |
421 | Y>H | No |
ClinGen gnomAD |
|
|
rs781838540 CA3449030 |
423 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1382921748 CA361249911 |
425 | V>A | No |
ClinGen TOPMed |
|
|
CA3449031 rs782481543 |
425 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782425324 COSM1061939 COSM1062108 CA3449034 |
427 | A>T | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
COSM1292033 CA361249981 rs1249758735 |
427 | A>V | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs566217489 CA361249990 COSM420904 |
428 | R>W | lung Variant assessed as Somatic; 0.0 impact. urinary_tract [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449039 rs782306152 |
430 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA361250022 rs1489343208 |
430 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA361250024 rs1489343208 |
430 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
CA3449041 rs781963063 |
431 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449040 rs781963063 |
431 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361250056 rs781963063 |
431 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1358816520 COSM1541693 CA361250073 |
432 | S>* | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA361250081 rs1358816520 COSM166725 COSM1062110 |
432 | S>L | liver Variant assessed as Somatic; impact. endometrium haematopoietic_and_lymphoid_tissue [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA3449043 rs781981384 |
433 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449046 rs372591021 |
436 | W>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361250169 rs1389967410 |
437 | A>T | No |
ClinGen TOPMed |
|
|
rs782102799 CA3449047 |
438 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA3449048 rs782730059 |
438 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA361250186 rs782102799 |
438 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA3449052 rs146607016 |
439 | A>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449051 rs146607016 |
439 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782448945 CA361250224 CA361250229 |
440 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782563017 CA361250241 |
441 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA3449054 rs782563017 |
441 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361250257 rs1554135205 |
442 | S>A | No |
ClinGen gnomAD |
|
|
CA3449055 rs182652510 |
442 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361250285 rs1490262611 |
444 | E>K | No |
ClinGen TOPMed |
|
|
CA3449060 CA361250408 rs782014983 |
447 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782412740 CA3449059 |
447 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782055958 CA3449061 |
448 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1554135211 CA361250470 |
450 | D>H | No |
ClinGen gnomAD |
|
|
CA361250476 rs1554135214 |
450 | D>V | No |
ClinGen gnomAD |
|
|
CA361250548 rs781957990 |
451 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361250526 rs1580819130 |
451 | N>T | No |
ClinGen Ensembl |
|
|
CA361250524 rs1554135223 |
451 | N>Y | No |
ClinGen gnomAD |
|
|
CA3449066 rs558922738 |
453 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA361250606 rs1554135229 |
453 | P>S | No |
ClinGen gnomAD |
|
|
rs782711903 CA3449068 |
454 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA3449071 COSM736226 rs782481189 |
455 | F>L | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361250734 rs1562349342 |
457 | Q>H | No |
ClinGen Ensembl |
|
|
CA361250728 rs1400734217 |
457 | Q>P | No |
ClinGen TOPMed |
|
|
CA361250757 rs782724807 |
458 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 458 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782724807 CA3449072 |
458 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781874568 CA3449073 |
459 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361250869 rs782688834 |
460 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361250902 rs1479334414 |
461 | T>R | No |
ClinGen TOPMed |
|
|
rs141459004 CA361250956 |
463 | F>L | No |
ClinGen ESP gnomAD |
|
|
rs1554135255 CA361250962 COSM1062112 |
464 | V>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1554135258 CA361250993 |
465 | K>R | No |
ClinGen gnomAD |
|
|
rs1447627598 CA361251068 |
466 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA361251045 rs1195624528 |
466 | E>K | No |
ClinGen TOPMed |
|
|
rs1554135266 CA361251106 |
467 | N>K | No |
ClinGen gnomAD |
|
|
rs1554135267 CA361251122 |
468 | N>D | No |
ClinGen gnomAD |
|
|
rs782269701 CA3449076 |
468 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA3449078 rs782612363 COSM448775 |
469 | P>L | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361251147 rs782612363 |
469 | P>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3449077 rs782453867 |
469 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1580821328 CA361251158 |
470 | P>A | No |
ClinGen Ensembl |
|
|
CA361251176 rs1580821411 |
470 | P>R | No |
ClinGen Ensembl |
|
|
rs781995630 CA3449082 |
472 | C>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs145155815 CA3449080 |
472 | C>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs781995630 CA3449081 |
472 | C>S | No |
ClinGen ExAC gnomAD |
|
|
rs1344050034 CA361251270 |
474 | I>T | No |
ClinGen TOPMed |
|
|
rs1554135281 CA361251255 |
474 | I>V | No |
ClinGen gnomAD |
|
|
rs1431063044 CA361251292 |
475 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361251286 rs1271549393 |
475 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
CA361251309 rs1554135296 |
476 | T>I | No |
ClinGen gnomAD |
|
|
CA361251353 rs1554135300 |
478 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361251350 rs1554135300 |
478 | S>W | No |
ClinGen gnomAD |
|
|
CA128356570 rs782156940 |
479 | A>E | No |
ClinGen Ensembl |
|
|
rs782156940 CA361251380 |
479 | A>V | No |
ClinGen Ensembl |
|
|
CA3449088 rs781943368 |
480 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs375168399 CA3449087 CA128356575 |
480 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC TOPMed gnomAD NCI-TCGA |
|
rs782763638 CA3449090 |
481 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554135313 CA361251401 |
481 | D>N | No |
ClinGen gnomAD |
|
|
COSM3393207 rs1554135320 CA361251439 |
482 | A>V | pancreas [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1169870813 CA361251505 |
484 | A>E | No |
ClinGen TOPMed |
|
|
rs781842437 CA361251496 |
484 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3240500 rs781842437 CA3449094 COSM1219584 |
484 | A>T | Variant assessed as Somatic; 0.0 impact. pancreas large_intestine central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs782661359 CA3449096 |
486 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1433785 COSM1671936 CA3449098 rs782561322 |
488 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs138999138 CA128356655 COSM736301 |
488 | A>V | lung [Cosmic] | No |
ClinGen cosmic curated ESP TOPMed |
|
CA3449102 rs781962593 |
489 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
CA361251627 rs1554135337 |
490 | V>G | No |
ClinGen gnomAD |
|
|
rs782204797 CA3449103 |
490 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 490 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3449106 rs782163939 |
491 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1554135342 CA361251675 |
492 | Y>H | No |
ClinGen gnomAD |
|
|
rs1214782595 CA361251737 |
494 | L>M | No |
ClinGen TOPMed |
|
|
rs570444161 CA128356672 |
494 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs782403364 CA361251759 |
495 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs782403364 CA3449107 |
495 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs781933371 CA3449108 |
496 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361251778 rs781933371 |
496 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150074715 CA3449110 |
497 | L>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361251821 COSM72092 rs1356053208 |
498 | R>W | ovary Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs138465402 CA3449111 |
499 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138465402 CA3449112 |
499 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1166974775 CA361251868 |
500 | G>D | No |
ClinGen TOPMed |
|
|
rs200873751 CA3449114 |
500 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200873751 CA3449113 |
500 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1183512745 CA361251899 |
501 | E>D | No |
ClinGen TOPMed |
|
|
CA3449118 rs781833224 |
501 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449117 rs781833224 |
501 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361251906 rs1554135389 |
502 | R>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3449119 rs782651384 |
502 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA361251915 rs147416989 |
503 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs147416989 CA3449120 |
503 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM3393187 rs147416989 CA3449121 |
503 | A>T | Variant assessed as Somatic; 0.0 impact. pancreas central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 503 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM163312 rs374888032 CA3449123 |
505 | S>L | breast [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs374888032 CA3449122 |
505 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361252004 rs1554135420 |
506 | S>G | No |
ClinGen gnomAD |
|
|
CA361252008 rs1580826433 |
506 | S>N | No |
ClinGen Ensembl |
|
|
CA361252061 rs1554135430 |
508 | V>G | No |
ClinGen gnomAD |
|
|
CA361252051 rs1270383213 |
508 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361252041 rs1270383213 |
508 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs576159276 CA3449128 |
510 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA361252165 COSM1062120 rs1554135453 |
512 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA3449130 rs782719858 |
513 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1375358248 CA361252211 |
514 | S>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 515 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781799149 CA3449131 |
515 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA361252315 rs1298713019 |
519 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA361252322 rs1298713019 |
519 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361252331 rs1352596879 |
519 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA3449134 rs782723772 |
521 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1554135483 CA361252434 |
522 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs373042408 CA128356829 |
525 | H>D | No |
ClinGen gnomAD |
|
|
rs782666630 CA3449137 |
525 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1554135493 CA361252560 |
525 | H>R | No |
ClinGen gnomAD |
|
|
rs373042408 CA361252550 |
525 | H>Y | No |
ClinGen gnomAD |
|
|
CA361252595 rs1162944895 |
526 | E>* | No |
ClinGen TOPMed |
|
|
rs781885464 CA3449138 |
528 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361252636 rs1422136448 |
528 | L>V | No |
ClinGen TOPMed |
|
| TCGA novel | 529 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1178302162 COSM1062124 CA361252717 |
529 | E>D | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs782444226 CA3449139 |
530 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs782524333 CA3449142 |
531 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA3449144 rs782292494 |
532 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA361252806 rs1490395920 |
532 | Q>R | No |
ClinGen TOPMed |
|
|
rs1290587139 CA361252849 |
534 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 535 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 535 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554135516 CA361252918 |
536 | S>I | No |
ClinGen gnomAD |
|
|
rs781942603 CA3449147 |
536 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361252936 rs1554135520 |
537 | A>E | No |
ClinGen gnomAD |
|
|
CA3449148 rs551745791 |
537 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449149 rs782367355 |
538 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs782754518 CA3449152 |
539 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782754518 CA3449153 |
539 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA361253017 rs1302809722 |
540 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361253011 rs1405342443 |
540 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA361253013 rs1405342443 |
540 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361253005 rs1405342443 |
540 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA361253021 rs1554135533 |
541 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1554135535 CA361253027 |
541 | G>D | No |
ClinGen gnomAD |
|
|
rs782783902 CA3449158 |
542 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA3449156 rs781787561 |
542 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781787561 CA3449157 |
542 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449160 rs781862453 |
543 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs781862453 CA3449159 |
543 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1554135544 CA361253135 |
544 | P>L | No |
ClinGen gnomAD |
|
|
CA361253126 rs1562353015 |
544 | P>S | No |
ClinGen Ensembl |
|
|
CA361253146 rs1201962731 |
545 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA361253154 rs1267674995 |
546 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs782200664 CA3449162 |
546 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA361253148 rs782200664 |
546 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA361253172 rs1554135551 |
547 | S>G | No |
ClinGen gnomAD |
|
|
CA3449164 rs782629469 |
548 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA3449166 CA361253204 rs782386883 |
549 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554135559 CA361253224 |
550 | T>M | No |
ClinGen gnomAD |
|
|
rs1554135559 CA361253222 |
550 | T>R | No |
ClinGen gnomAD |
|
|
CA361253235 rs1214967185 |
551 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA3449168 rs782289640 |
553 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs147222848 CA3449169 |
554 | F>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361253324 COSM163309 rs1554135572 |
555 | V>M | breast [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA361253349 rs1344658459 |
556 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3449171 rs782049482 |
557 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128356941 rs782818423 |
557 | D>N | No |
ClinGen gnomAD |
|
|
rs782735534 CA3449172 |
558 | E>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 560 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782811496 CA3449176 |
561 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs781892908 CA3449177 |
562 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs376827518 COSM1541687 CA3449178 |
562 | A>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449179 rs782720014 |
563 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA361253524 rs1387042597 |
565 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1470495662 CA361253545 |
566 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA3449182 rs782635892 |
567 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs369889655 CA3449181 |
567 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361253581 rs782635892 |
567 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554135601 CA361253622 |
569 | R>P | No |
ClinGen gnomAD |
|
| TCGA novel | 569 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3449184 COSM736224 rs782545562 |
569 | R>W | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1580833993 CA361253653 |
570 | V>G | No |
ClinGen Ensembl |
|
|
CA361253667 rs782197697 |
571 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150822529 CA361253662 |
571 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449186 rs782197697 |
571 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150822529 CA3449185 |
571 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449188 rs782621778 |
573 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361253710 rs1554135618 |
573 | T>S | No |
ClinGen gnomAD |
|
|
rs566157572 CA3449189 |
574 | G>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361253733 rs566157572 |
574 | G>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782034445 CA361253765 |
576 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA361253768 rs782034445 |
576 | A>S | No |
ClinGen ExAC gnomAD |
|
|
COSM1567450 rs782034445 CA3449191 |
576 | A>T | Variant assessed as Somatic; 0.0 impact. pancreas large_intestine central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1254092346 CA361253813 |
578 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs782151815 CA3449192 |
579 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449193 rs782329618 |
580 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449194 rs781929038 |
582 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361253906 rs781929038 |
582 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361253922 rs1554135629 |
583 | R>P | No |
ClinGen gnomAD |
|
|
CA361253920 rs1554135629 |
583 | R>Q | No |
ClinGen gnomAD |
|
|
rs1554135637 CA361253956 |
585 | V>L | No |
ClinGen gnomAD |
|
|
rs1554135637 CA361253953 |
585 | V>M | No |
ClinGen gnomAD |
|
|
rs782727190 CA3449196 COSM589604 |
586 | G>C | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3449198 rs139331486 |
587 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139331486 CA3449199 |
587 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 588 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361254024 rs1554135658 |
588 | G>D | No |
ClinGen gnomAD |
|
|
rs868947511 CA361254004 |
588 | G>S | No |
ClinGen Ensembl |
|
|
CA361254050 rs1463857547 |
589 | H>P | No |
ClinGen TOPMed |
|
|
CA361254063 rs1373246129 |
589 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1554135661 CA361254039 |
589 | H>Y | No |
ClinGen gnomAD |
|
|
CA361254069 rs868933169 |
590 | V>L | No |
ClinGen gnomAD |
|
|
CA128357135 rs17844311 |
591 | V>G | No |
ClinGen Ensembl |
|
|
CA3449202 rs782569229 |
592 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs373780071 CA361254168 |
595 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449204 rs373780071 |
595 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554135692 CA361254182 |
595 | R>L | No |
ClinGen gnomAD |
|
|
rs1386598071 CA361254187 |
596 | A>S | No |
ClinGen TOPMed |
|
| TCGA novel | 597 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3449207 rs782406262 |
597 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs782290158 CA361254201 |
597 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782290158 CA3449206 |
597 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782188268 CA3449209 |
599 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs782188268 CA3449210 |
599 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs144272290 CA3449214 |
602 | G>A | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 602 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA128357204 rs758091977 |
602 | G>S | No |
ClinGen Ensembl |
|
|
CA361254363 rs1554135717 |
603 | Y>F | No |
ClinGen gnomAD |
|
|
rs1554135720 CA361254385 |
604 | N>K | No |
ClinGen gnomAD |
|
|
rs1197296602 CA361254383 |
604 | N>S | No |
ClinGen TOPMed |
|
|
CA361254404 rs1554135724 |
605 | A>E | No |
ClinGen gnomAD |
|
|
rs1480850746 CA361254402 |
605 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA3449215 rs548420776 |
606 | W>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361254438 rs1252090909 |
607 | L>I | No |
ClinGen TOPMed |
|
|
CA128357215 rs146617582 |
607 | L>R | No |
ClinGen ESP gnomAD |
|
|
rs1554135734 CA361254458 |
608 | S>* | No |
ClinGen gnomAD |
|
|
rs781840981 CA3449216 |
609 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361254462 rs782719079 |
609 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs782719079 CA128357222 |
609 | Y>N | No |
ClinGen TOPMed gnomAD |
|
|
CA361254511 rs1311247537 |
611 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1393449326 CA361254513 |
612 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
rs570116646 COSM1261303 CA3449218 |
613 | P>L | Variant assessed as Somatic; 0.0 impact. oesophagus large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs570116646 CA361254568 |
613 | P>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781788792 CA3449217 |
613 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs782729752 CA3449219 |
614 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA3449220 rs370886142 |
615 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs370886142 CA361254587 |
615 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3449223 rs781810532 |
618 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781810532 CA361254676 |
618 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781810532 CA361254679 |
618 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199869403 CA3449226 |
621 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA3449225 rs140139345 |
621 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA3449227 rs143772295 |
622 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554135772 CA361254816 COSM1696280 |
623 | R>C | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA361254830 rs1183967538 |
623 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1554135777 CA361254839 |
624 | V>L | No |
ClinGen gnomAD |
|
| TCGA novel | 625 | G>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361254867 rs1554135780 |
626 | L>P | No |
ClinGen gnomAD |
|
|
rs1554135783 CA361254923 |
629 | G>A | No |
ClinGen gnomAD |
|
|
rs782783816 CA128357773 COSM330476 |
633 | T>M | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs782783816 CA361256276 |
633 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1554135791 CA361256289 |
634 | T>I | No |
ClinGen gnomAD |
|
|
CA361256281 rs1554135790 |
634 | T>S | No |
ClinGen gnomAD |
|
|
CA361256292 rs146878440 |
635 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM736222 COSM736295 rs146878440 CA3449229 |
635 | R>G | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs781860297 CA128357807 |
636 | A>D | No |
ClinGen Ensembl |
|
|
CA3449230 rs782394720 |
636 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3449231 rs781936180 |
637 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782170809 CA3449232 |
638 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1294221854 CA361256343 |
638 | D>G | No |
ClinGen TOPMed |
|
| TCGA novel | 638 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782358054 CA3449233 |
640 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA3449234 rs781952009 COSM163307 |
640 | T>M | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs148995786 COSM205071 COSM1061957 CA3449235 |
642 | A>T | large_intestine endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA3449236 rs782760551 |
644 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA3449237 COSM1061959 rs782021057 |
644 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA361256427 rs782021057 |
644 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449238 rs782069277 COSM1219612 |
645 | H>Y | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA3449239 rs577271797 |
646 | R>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs370874344 CA3449241 |
647 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1408397134 CA361256474 |
647 | L>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA361256472 rs1408397134 |
647 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA361256513 rs1554135818 |
650 | L>I | No |
ClinGen gnomAD |
|
|
rs1554135822 CA361256527 |
651 | V>L | No |
ClinGen gnomAD |
|
|
CA3449243 rs143048298 |
652 | K>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449244 rs143048298 |
652 | K>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361256544 rs1562356930 |
653 | D>N | No |
ClinGen Ensembl |
|
|
rs782188550 CA3449247 |
656 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449248 rs151141737 |
656 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1739093 rs782188550 CA3449246 |
656 | E>K | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA361256609 rs1454301862 |
656 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA3449250 rs782392130 |
658 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449251 COSM1663378 rs781987250 |
658 | S>L | kidney [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs781805810 CA3449252 |
659 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782329482 CA3449253 |
660 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128357952 rs183521691 |
662 | T>R | No |
ClinGen 1000Genomes |
|
|
rs6880234 VAR_048528 CA3449254 |
663 | A>G | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs782121311 CA3449258 |
665 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782004187 CA3449257 |
665 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554135890 CA361256693 |
666 | L>P | No |
ClinGen gnomAD |
|
|
CA361256689 rs781884851 |
666 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs377524749 COSM205073 CA3449262 |
667 | V>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA361256723 rs1319656276 |
670 | V>L | No |
ClinGen TOPMed |
|
|
CA361256731 rs1554135904 |
671 | E>* | No |
ClinGen gnomAD |
|
|
rs1554135904 CA361256729 |
671 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 671 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554135905 CA361256747 |
672 | S>G | No |
ClinGen gnomAD |
|
|
CA3449265 rs781833961 |
672 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361256768 rs1554135913 |
673 | G>R | No |
ClinGen gnomAD |
|
|
CA3449266 rs541994412 |
673 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs370529939 CA3449267 |
674 | Q>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1554135925 CA361256800 |
675 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs367543517 COSM1433799 CA3449268 |
675 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC gnomAD |
|
CA3449270 rs782551765 |
677 | K>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA128358074 rs146953156 |
677 | K>N | No |
ClinGen ESP |
|
|
CA3449269 rs782551765 |
677 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs782187233 CA3449271 |
678 | A>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 678 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3449272 rs782363433 |
678 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs137976668 CA361256862 |
679 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361256859 rs1470820599 |
679 | S>A | No |
ClinGen TOPMed |
|
|
rs137976668 CA128358120 |
679 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs137976668 CA3449274 |
679 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 680 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554135944 CA361256880 |
680 | S>W | No |
ClinGen gnomAD |
|
|
rs782375452 CA3449275 |
681 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs563280686 CA3449277 |
681 | R>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs563280686 CA3449278 |
681 | R>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361256889 COSM1219602 rs563280686 COSM448746 |
681 | R>Q | large_intestine breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
rs782375452 CA3449276 COSM1219598 |
681 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs782096123 CA3449281 |
682 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs782096123 CA3449280 |
682 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs781865521 CA3449282 |
682 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA3449283 rs782113000 |
683 | S>W | No |
ClinGen ExAC gnomAD |
|
|
rs781805077 CA3449285 |
684 | L>W | No |
ClinGen ExAC gnomAD |
|
|
rs1447681112 CA361256949 |
685 | G>D | No |
ClinGen TOPMed |
|
|
CA361256939 rs1195331479 |
685 | G>S | No |
ClinGen TOPMed |
|
|
CA361256958 rs1554135977 |
686 | I>F | No |
ClinGen gnomAD |
|
|
CA3449292 rs61730623 |
692 | E>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449291 rs61730623 |
692 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs61730623 CA3449293 |
692 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3449294 rs782175803 |
692 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3449295 rs782355508 |
693 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA361257109 rs1271601760 |
695 | D>A | No |
ClinGen TOPMed |
|
|
rs1227457835 CA361257111 |
695 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361257100 rs1554135989 |
695 | D>H | No |
ClinGen gnomAD |
|
|
rs1554135992 CA361257159 |
698 | V>G | No |
ClinGen gnomAD |
|
|
rs782130761 CA3449297 |
699 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
CA3449298 rs782366269 |
703 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554136006 CA361257246 |
704 | I>F | No |
ClinGen gnomAD |
|
|
rs1554136010 CA361257260 |
705 | C>S | No |
ClinGen gnomAD |
|
| TCGA novel | 706 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs547705434 CA3449301 |
706 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs138671187 CA3449300 COSM317812 |
706 | A>T | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
COSM1319271 COSM213553 CA3449302 rs547705434 |
706 | A>V | Variant assessed as Somatic; 0.0 impact. haematopoietic_and_lymphoid_tissue breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA361257305 rs1333191283 |
708 | S>P | No |
ClinGen TOPMed |
|
|
CA3449303 rs368394927 |
709 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3449304 rs368394927 COSM205075 |
709 | S>G | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3449305 rs781861599 |
709 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs201271180 CA128358244 |
710 | L>R | No |
ClinGen Ensembl |
|
|
CA361257368 rs1169920949 |
711 | L>S | No |
ClinGen TOPMed |
|
|
rs782570045 COSM1486362 CA3449306 |
712 | V>M | breast [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1450136766 CA361257400 |
713 | L>F | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 714 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554136030 CA361257423 |
714 | T>S | No |
ClinGen gnomAD |
|
|
rs781797304 CA3449308 |
715 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs371858287 CA3449309 |
716 | L>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554136046 CA361257456 |
717 | L>P | No |
ClinGen gnomAD |
|
|
CA128358277 rs375021446 |
718 | Y>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs782621405 CA3449310 |
719 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782621405 CA361257500 |
719 | T>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554136056 CA361257507 |
720 | A>T | No |
ClinGen gnomAD |
|
|
COSM332053 CA361257513 rs1554136059 COSM1541978 |
720 | A>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA361257515 rs1562359400 |
721 | L>M | No |
ClinGen Ensembl |
|
|
CA3449314 rs782633017 |
722 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA361257561 rs1441069501 |
725 | A>S | No |
ClinGen TOPMed |
|
|
rs782417627 COSM589667 CA3449316 |
725 | A>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs782229036 CA3449318 |
726 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782229036 CA361257572 |
726 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782229036 CA361257574 COSM227747 |
726 | P>R | NS [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs781920445 CA3449317 |
726 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782340668 CA3449319 |
728 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs782007391 CA3449320 |
729 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
COSM1061963 rs1554136093 CA361257640 |
730 | G>D | endometrium [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA3449321 rs782122239 |
731 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361257667 rs1283554877 |
732 | C>G | No |
ClinGen TOPMed |
|
|
rs782817140 CA3449322 |
733 | S>R | No |
ClinGen ExAC gnomAD |
|
|
TCGA novel CA361257724 rs1445514799 |
734 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen TOPMed |
|
CA3449324 rs144694616 |
735 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs144694616 CA3449323 |
735 | V>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554136107 CA361257773 |
737 | P>S | No |
ClinGen gnomAD |
|
|
CA361257804 rs1554136119 |
738 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 738 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1166723338 CA361257815 |
739 | L>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA361257818 rs1166723338 |
739 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs782775903 CA3449330 |
740 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781855969 CA361257833 |
741 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs781855969 CA3449331 |
741 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs1562360123 CA361257834 |
741 | C>Y | No |
ClinGen Ensembl |
|
|
CA3449332 rs782550876 |
742 | S>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA128358412 rs782550876 |
742 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554136131 CA361257862 |
743 | S>I | No |
ClinGen gnomAD |
|
|
CA361257873 rs1554136136 |
744 | A>S | No |
ClinGen gnomAD |
|
|
COSM1261274 rs782197887 CA3449334 |
744 | A>V | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs782384217 CA3449338 |
746 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782384217 COSM233063 CA361257923 |
746 | G>E | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA361257915 rs1272044084 |
746 | G>R | No |
ClinGen TOPMed |
|
|
rs782287542 CA3449340 |
747 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782287542 CA3449341 |
747 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1580852478 CA361257983 |
748 | W>* | No |
ClinGen Ensembl |
|
|
rs782091749 COSM482091 CA3449343 |
750 | F>L | kidney Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361258022 rs1554136166 |
751 | S>P | No |
ClinGen gnomAD |
|
|
rs1554136166 CA361258024 |
751 | S>T | No |
ClinGen gnomAD |
|
|
CA361258054 COSM1541679 rs1554136168 |
753 | Q>* | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA3449345 rs781997276 |
754 | R>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 754 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3449347 rs368032433 |
755 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3449346 COSM736214 rs368032433 |
755 | R>Q | lung Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs782067232 CA3449349 |
756 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1426602429 CA361258105 |
756 | Q>L | No |
ClinGen TOPMed |
|
|
rs782747305 CA3449350 |
757 | R>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782747305 CA361258111 |
757 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361258124 rs1580853646 |
758 | V>G | No |
ClinGen Ensembl |
|
|
rs1554136215 CA361258127 |
759 | C>R | No |
ClinGen gnomAD |
|
|
CA361258133 rs1554136217 |
759 | C>W | No |
ClinGen gnomAD |
|
|
rs1554136218 CA361258137 |
760 | S>P | No |
ClinGen gnomAD |
|
|
CA3449351 rs142732506 COSM589663 |
762 | E>D | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1404155432 CA361258161 |
762 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA3449353 rs146098956 |
763 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3449354 rs570094577 |
764 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs369010474 CA3449355 |
765 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361258183 rs369010474 |
765 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782592342 CA3449356 |
766 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA361258193 rs782592342 |
766 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA128358483 rs535358344 |
767 | T>I | No |
ClinGen gnomAD |
|
|
rs555143125 CA361258224 |
768 | D>A | No |
ClinGen Ensembl |
|
|
CA3449357 rs782191451 |
768 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA128358484 rs555143125 |
768 | D>G | No |
ClinGen Ensembl |
|
|
COSM589661 rs1554136233 CA361258245 |
770 | M>T | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1472484894 CA361258241 |
770 | M>V | No |
ClinGen TOPMed |
|
|
rs1249098151 CA361258253 |
771 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA361258287 rs1488520906 |
773 | S>G | No |
ClinGen TOPMed |
|
|
CA3449358 rs189142588 |
774 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1554136246 CA361258330 |
776 | L>F | No |
ClinGen gnomAD |
|
|
COSM226142 CA3449359 rs782594648 |
777 | P>S | NS [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA361258398 rs1218762370 |
780 | P>L | No |
ClinGen TOPMed |
|
|
CA361258394 rs1554136253 |
780 | P>T | No |
ClinGen gnomAD |
|
|
CA3449360 rs782253021 |
781 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782253021 CA361258401 |
781 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1286648701 CA361258425 |
782 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA3449362 rs369682118 |
783 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782028130 CA3449363 |
783 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1008533110 CA128358549 |
784 | D>G | No |
ClinGen gnomAD |
|
|
rs782073950 CA3454452 |
786 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA361259520 rs1490306705 |
786 | P>S | No |
ClinGen TOPMed |
|
|
rs374951627 CA3454453 |
787 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781913955 CA3454454 |
787 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA3454455 rs781913955 |
787 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782109224 CA3454458 |
792 | D>H | No |
ClinGen ExAC |
|
|
COSM3696815 COSM3696819 COSM3696826 COSM3696817 CA3454459 COSM3696814 COSM3696822 COSM3696816 COSM3696828 COSM3696812 COSM3696820 rs782774245 COSM3696813 COSM3696823 COSM3696825 COSM3696821 COSM3696827 COSM3696818 COSM3696824 |
793 | W>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361259640 rs782774245 |
793 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA3454460 rs141879545 |
794 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454463 rs781815387 |
797 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138901709 CA3454464 |
798 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782686641 CA3454465 |
799 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1363421000 CA361259736 |
800 | R>I | No |
ClinGen TOPMed |
|
|
rs1586790986 CA361259751 |
801 | A>G | No |
ClinGen Ensembl |
|
|
CA3454466 rs782253140 |
802 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454467 rs782336746 |
803 | M>V | No |
ClinGen ExAC |
|
|
CA361259787 rs1554240128 |
804 | H>N | No |
ClinGen gnomAD |
|
|
rs149397164 CA3454468 |
805 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782426631 CA3454484 |
806 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782587733 CA3454485 |
806 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs782426631 CA361260538 |
806 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1181664726 CA361260559 |
807 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361260577 rs1554244276 |
808 | H>P | No |
ClinGen gnomAD |
|
|
COSM1062442 COSM1062448 COSM1062450 rs782273708 COSM1062445 COSM1062454 COSM1062455 COSM1062443 COSM1062452 COSM1062456 COSM1062457 COSM1062451 COSM1062453 COSM1062449 COSM1062447 CA3454486 COSM1062444 |
808 | H>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3454488 rs782634646 |
810 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454487 rs782419098 |
810 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs147537783 CA3454489 |
811 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs981642614 CA128362369 |
812 | A>T | No |
ClinGen Ensembl |
|
|
rs782347331 CA3454490 |
813 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260711 rs1468199443 |
814 | I>V | No |
ClinGen TOPMed |
|
|
rs555523473 CA3454493 |
816 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139355257 CA3454492 |
816 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782025005 CA3454494 |
818 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260802 rs1278779763 |
819 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3454495 rs201991205 |
821 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454497 rs201572428 |
823 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3454496 rs782766562 |
823 | D>V | No |
ClinGen ExAC |
|
|
rs1554244431 CA361260933 |
825 | Q>R | No |
ClinGen gnomAD |
|
|
CA3454498 rs782094765 |
826 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454499 RCV000950135 rs79247475 |
827 | P>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA128362405 rs369053351 |
827 | P>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1554244455 CA361260996 |
828 | T>A | No |
ClinGen gnomAD |
|
|
CA3454501 rs782544627 |
829 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454502 rs577838197 |
831 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454504 rs781852534 |
831 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs781852534 CA3454503 |
831 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs782605920 CA3454505 |
831 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs199851685 CA3454506 |
833 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454507 rs782437404 |
834 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs560422677 CA3454508 |
834 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs560422677 CA3454509 |
834 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361261129 rs782437404 |
834 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782179145 CA3454531 |
835 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454532 rs782321757 |
838 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554262240 CA361268348 |
840 | E>G | No |
ClinGen gnomAD |
|
|
rs781996586 CA3454536 |
846 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1179266 rs782079089 COSM1179264 COSM1179272 COSM1179273 COSM1179269 COSM1179270 COSM1179277 COSM1179268 COSM1179263 COSM1179271 COSM1179278 COSM1179275 COSM1179276 COSM1179265 CA3454537 COSM1179267 COSM1179274 |
847 | A>V | lung prostate [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1588246273 CA361268557 |
849 | V>G | No |
ClinGen Ensembl |
|
|
CA3454540 rs782068657 |
849 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1563727066 CA361268679 |
853 | S>N | No |
ClinGen Ensembl |
|
|
COSM139598 COSM139601 COSM139604 COSM139606 COSM139609 COSM139603 COSM139600 COSM139611 COSM139608 rs1554262287 COSM139599 COSM139607 COSM139602 COSM139605 COSM139610 CA361268865 |
859 | G>E | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs900919931 CA128372514 |
859 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1554262289 CA361268920 |
861 | G>D | No |
ClinGen gnomAD |
|
|
CA3454542 rs575518914 |
863 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175529844 CA361268995 |
864 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3454543 rs782119637 |
866 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454546 rs552954748 |
867 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552954748 CA3454545 |
867 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs373683237 CA3454547 |
868 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1486746921 CA361269173 |
869 | G>S | No |
ClinGen TOPMed |
|
|
CA128372547 rs1057913 |
873 | D>A | No |
ClinGen Ensembl |
|
|
rs371269236 CA3454551 |
873 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454552 rs782334415 |
874 | K>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454553 rs782623559 |
877 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3454555 rs782328874 |
878 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454556 rs200822345 |
879 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454559 rs782009776 |
883 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142720081 CA361269729 |
883 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3454558 rs142720081 |
883 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782087059 CA3454560 |
884 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1289763016 CA361269834 |
886 | I>V | No |
ClinGen TOPMed |
|
|
rs760426957 CA3454562 |
887 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1166265 COSM1166271 COSM1166266 COSM1166268 COSM1166267 COSM1166273 COSM1166276 COSM1166277 COSM1166272 COSM1166264 COSM1166279 rs147351924 CA3454561 COSM1166275 COSM1166269 COSM1166278 COSM1166270 COSM1166274 |
887 | R>W | large_intestine haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA361269875 rs1554262408 |
888 | Q>K | No |
ClinGen gnomAD |
|
|
CA361269953 rs1554262420 |
890 | P>A | No |
ClinGen gnomAD |
|
|
CA361269962 rs1359138927 |
890 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1314860754 CA361269972 |
891 | T>A | No |
ClinGen TOPMed |
|
|
CA361270002 rs1554262437 |
892 | N>K | No |
ClinGen TOPMed |
|
|
CA3454564 rs148436868 |
893 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554262456 CA361270119 |
895 | I>T | No |
ClinGen gnomAD |
|
|
rs781853535 CA3454565 |
895 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529364872 CA128372646 |
896 | D>E | No |
ClinGen Ensembl |
|
|
CA3454567 rs142570778 |
896 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128372638 rs782057926 |
896 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3454568 rs781835321 |
897 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs782451974 CA3454569 |
900 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3454570 rs782578873 |
902 | T>I | No |
ClinGen ExAC |
|
|
rs782274123 CA3454571 |
903 | F>S | No |
ClinGen ExAC gnomAD |
|
|
COSM216699 COSM216705 CA3454573 COSM216710 rs782642898 COSM1158471 COSM216696 COSM216700 COSM216702 COSM216709 COSM216704 COSM216698 COSM216697 COSM216706 COSM216707 COSM216701 COSM216703 COSM216708 |
904 | G>S | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454574 rs782270689 |
906 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs782270689 CA361270554 |
906 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1259591783 CA361270565 |
907 | E>Q | No |
ClinGen TOPMed |
|
|
CA361270593 rs1554262487 |
908 | E>D | No |
ClinGen gnomAD |
|
|
CA3454575 rs782348993 |
909 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs781972089 CA3454577 |
910 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554262492 CA361270633 |
910 | K>R | No |
ClinGen gnomAD |
|
|
rs374660085 CA3454578 |
915 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361270828 rs1554262513 |
916 | K>R | No |
ClinGen gnomAD |
|
|
CA3454579 rs782413551 |
917 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782413551 CA361270853 |
917 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307653192 CA361270984 |
920 | K>N | No |
ClinGen TOPMed |
|
|
CA128372721 rs184181976 |
920 | K>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
rs1554262529 CA361271070 |
923 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782776948 CA3454583 |
925 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3454584 rs781954349 |
928 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361271296 rs1295693430 |
929 | N>D | No |
ClinGen TOPMed |
|
|
rs1554262551 CA361271322 |
929 | N>K | No |
ClinGen gnomAD |
|
|
CA361271306 rs1415929182 |
929 | N>S | No |
ClinGen TOPMed |
|
|
CA128372734 rs958247947 |
930 | S>G | No |
ClinGen Ensembl |
|
|
CA128372735 rs17855798 |
930 | S>N | No |
ClinGen Ensembl |
|
|
COSM1434122 COSM1434119 CA3454585 COSM1434134 COSM1434133 COSM1434130 COSM1434131 COSM1434125 COSM1434126 COSM1434124 COSM1434127 COSM1434129 COSM1434121 COSM1434120 COSM1434123 rs199928168 COSM1434128 COSM1434132 |
931 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA361271405 rs1301104421 |
932 | T>A | No |
ClinGen TOPMed |
|
|
CA361271440 rs1554262572 |
933 | D>E | No |
ClinGen gnomAD |
|
|
CA361271462 rs1463725058 |
934 | N>Y | No |
ClinGen TOPMed |
No associated diseases with Q9UN72
11 regional properties for Q9UN72
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Cadherin-like | 45 - 133 | IPR002126-1 |
| domain | Cadherin-like | 134 - 242 | IPR002126-2 |
| domain | Cadherin-like | 242 - 350 | IPR002126-3 |
| domain | Cadherin-like | 351 - 565 | IPR002126-4 |
| domain | Cadherin-like | 581 - 678 | IPR002126-5 |
| domain | Cadherin, N-terminal | 30 - 111 | IPR013164 |
| conserved_site | Cadherin conserved site | 230 - 240 | IPR020894-1 |
| conserved_site | Cadherin conserved site | 338 - 348 | IPR020894-2 |
| conserved_site | Cadherin conserved site | 443 - 453 | IPR020894-3 |
| conserved_site | Cadherin conserved site | 553 - 563 | IPR020894-4 |
| domain | Cadherin, C-terminal catenin-binding domain | 787 - 920 | IPR031904 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium ion binding | Binding to a calcium ion (Ca2+). |
| identical protein binding | Binding to an identical protein or proteins. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| cell adhesion | The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
| cell-cell recognition | Cell recognition between cells. May involve the formation of specialized cell junctions. |
| homophilic cell adhesion via plasma membrane adhesion molecules | The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell. |
| nervous system development | The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. |
45 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q3SWX5 | CDH6 | Cadherin-6 | Bos taurus (Bovine) | PR |
| P79995 | CDH10 | Cadherin-10 | Gallus gallus (Chicken) | PR |
| Q8UVJ7 | CDHR1 | Cadherin-related family member 1 | Gallus gallus (Chicken) | PR |
| Q5DRC8 | PCDHB6 | Protocadherin beta-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE4 | PCDHA8 | Protocadherin alpha-8 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE6 | PCDHA6 | Protocadherin alpha-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF0 | PCDHA2 | Protocadherin alpha-2 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE7 | PCDHA5 | Protocadherin alpha-5 | Pan troglodytes (Chimpanzee) | PR |
| Q9VJB6 | CadN2 | Putative neural-cadherin 2 | Drosophila melanogaster (Fruit fly) | PR |
| Q9ULB4 | CDH9 | Cadherin-9 | Homo sapiens (Human) | PR |
| P12830 | CDH1 | Cadherin-1 | Homo sapiens (Human) | PR |
| Q9H159 | CDH19 | Cadherin-19 | Homo sapiens (Human) | PR |
| Q9Y6N8 | CDH10 | Cadherin-10 | Homo sapiens (Human) | PR |
| P55285 | CDH6 | Cadherin-6 | Homo sapiens (Human) | PR |
| P19022 | CDH2 | Cadherin-2 | Homo sapiens (Human) | PR |
| Q6ZTQ4 | CDHR3 | Cadherin-related family member 3 | Homo sapiens (Human) | PR |
| Q9BZA8 | PCDH11Y | Protocadherin-11 Y-linked | Homo sapiens (Human) | PR |
| Q08174 | PCDH1 | Protocadherin-1 | Homo sapiens (Human) | PR |
| Q9HC56 | PCDH9 | Protocadherin-9 | Homo sapiens (Human) | PR |
| Q9P2E7 | PCDH10 | Protocadherin-10 | Homo sapiens (Human) | PR |
| Q9Y5H8 | PCDHA3 | Protocadherin alpha-3 | Homo sapiens (Human) | PR |
| Q9UN75 | PCDHA12 | Protocadherin alpha-12 | Homo sapiens (Human) | PR |
| Q9Y5I2 | PCDHA10 | Protocadherin alpha-10 | Homo sapiens (Human) | PR |
| Q9UN74 | PCDHA4 | Protocadherin alpha-4 | Homo sapiens (Human) | PR |
| Q9Y5I1 | PCDHA11 | Protocadherin alpha-11 | Homo sapiens (Human) | PR |
| Q9Y5H7 | PCDHA5 | Protocadherin alpha-5 | Homo sapiens (Human) | PR |
| Q9UN73 | PCDHA6 | Protocadherin alpha-6 | Homo sapiens (Human) | PR |
| Q9Y5H6 | PCDHA8 | Protocadherin alpha-8 | Homo sapiens (Human) | PR |
| Q9Y5I3 | PCDHA1 | Protocadherin alpha-1 | Homo sapiens (Human) | PR |
| Q9Y5H9 | PCDHA2 | Protocadherin alpha-2 | Homo sapiens (Human) | PR |
| Q9Y5H3 | PCDHGA10 | Protocadherin gamma-A10 | Homo sapiens (Human) | PR |
| O60330 | PCDHGA12 | Protocadherin gamma-A12 | Homo sapiens (Human) | PR |
| Q9Y5G4 | PCDHGA9 | Protocadherin gamma-A9 | Homo sapiens (Human) | PR |
| Q9Y5G0 | PCDHGB5 | Protocadherin gamma-B5 | Homo sapiens (Human) | PR |
| Q9Y5E3 | PCDHB6 | Protocadherin beta-6 | Homo sapiens (Human) | PR |
| Q9Y5F1 | PCDHB12 | Protocadherin beta-12 | Homo sapiens (Human) | PR |
| P09803 | Cdh1 | Cadherin-1 | Mus musculus (Mouse) | PR |
| P15116 | Cdh2 | Cadherin-2 | Mus musculus (Mouse) | PR |
| P70407 | Cdh9 | Cadherin-9 | Mus musculus (Mouse) | PR |
| P97326 | Cdh6 | Cadherin-6 | Mus musculus (Mouse) | PR |
| P70408 | Cdh10 | Cadherin-10 | Mus musculus (Mouse) | PR |
| Q8VHF2 | Cdhr5 | Cadherin-related family member 5 | Mus musculus (Mouse) | PR |
| P55280 | Cdh6 | Cadherin-6 | Rattus norvegicus (Rat) | PR |
| Q9Z1Y3 | Cdh2 | Cadherin-2 | Rattus norvegicus (Rat) | PR |
| Q767I8 | Pcdha4 | Protocadherin alpha-4 | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MVCPNGYDPG | GRHLLLFIII | LAAWEAGRGQ | LHYSVPEEAK | HGNFVGRIAQ | DLGLELAELV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PRLFRAVCKF | RGDLLEVNLQ | NGILFVNSRI | DREELCGRSA | ECSIHLEVIV | ERPLQVFHVD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VEVKDINDNP | PVFPATQRNL | FIAESRPLDS | RFPLEGASDA | DIGENALLTY | RLSPNEYFFL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DVPTSNQQVK | PLGLVLRKLL | DREETPELHL | LLTATDGGKP | ELTGTVQLLI | TVLDNNDNAP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VFDRTLYTVK | LPENVSIGTL | VIHPNASDLD | EGLNGDIIYS | FSSDVSPDIK | SKFHMDPLSG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| AITVIGHMDF | EESRAHKIPV | EAVDKGFPPL | AGHCTVLVEV | VDVNDNAPQL | TLTSLSLPIP |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EDAQPGTVIT | LISVFDRDFG | VNGQVTCSLT | PRVPFKLVST | FKNYYSLVLD | SALDRESVSA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YELVVTARDG | GSPSLWATAS | VSVEVADVND | NAPAFAQPEY | TVFVKENNPP | GCHIFTVSAG |
| 490 | 500 | 510 | 520 | 530 | 540 |
| DADAQKNALV | SYSLVELRVG | ERALSSYVSV | HAESGKVYAL | QPLDHEELEL | LQFQVSARDA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GVPPLGSNVT | LQVFVLDEND | NAPALLAPRV | GGTGGAVREL | VPRSVGAGHV | VAKVRAVDAD |
| 610 | 620 | 630 | 640 | 650 | 660 |
| SGYNAWLSYE | LQPVAAGASI | PFRVGLYTGE | ISTTRALDET | DAPRHRLLVL | VKDHGEPSLT |
| 670 | 680 | 690 | 700 | 710 | 720 |
| ATATVLVSLV | ESGQAPKASS | RASLGIAGPE | TELVDVNVYL | IIAICAVSSL | LVLTLLLYTA |
| 730 | 740 | 750 | 760 | 770 | 780 |
| LRCSAPSSEG | ACSLVKPTLV | CSSAVGSWSF | SQQRRQRVCS | GEGPPKTDLM | AFSPSLPQGP |
| 790 | 800 | 810 | 820 | 830 | 840 |
| SSTDNPRQPN | PDWRYSASLR | AGMHSSVHLE | EAGILRAGPG | GPDQQWPTVS | SATPEPEAGE |
| 850 | 860 | 870 | 880 | 890 | 900 |
| VSPPVGAGVN | SNSWTFKYGP | GNPKQSGPGE | LPDKFIIPGS | PAIISIRQEP | TNSQIDKSDF |
| 910 | 920 | 930 | |||
| ITFGKKEETK | KKKKKKKGNK | TQEKKEKGNS | TTDNSDQ |