Q9Y5I1
Gene name |
PCDHA11 (CNRS7) |
Protein name |
Protocadherin alpha-11 |
Names |
PCDH-alpha-11 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:56138 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9Y5I1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9Y5I1-F1 | Predicted | AlphaFoldDB |
1026 variants for Q9Y5I1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000508600 CA3454461 rs150254638 |
806 | R>H | Hirschsprung disease, susceptibility to, 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1562622538 CA361313487 |
7 | R>G | No |
ClinGen Ensembl |
|
|
CA128378142 rs371936789 |
8 | G>* | No |
ClinGen gnomAD |
|
|
rs781973798 CA3451663 |
11 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs782251882 CA3451664 |
13 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs782396331 CA3451665 |
13 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs1158270305 CA361313674 |
15 | Q>R | No |
ClinGen TOPMed |
|
|
rs74664704 CA361313728 |
18 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs74664704 CA3451666 |
18 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782164931 CA3451667 |
19 | L>F | No |
ClinGen ExAC |
|
|
CA3451670 rs782094054 |
22 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs200717410 CA361313898 |
25 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200962401 CA3451671 |
25 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3451674 rs782798909 |
26 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA361313916 rs782798909 |
26 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs782530772 CA3451673 |
26 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA3451677 rs781787163 |
28 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs200563745 CA3451679 |
29 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3451680 rs200563745 |
29 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554162601 CA361313966 |
29 | G>V | No |
ClinGen gnomAD |
|
| TCGA novel | 30 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1215630740 CA361313989 |
30 | Q>H | No |
ClinGen TOPMed |
|
|
CA128378179 rs782002128 |
30 | Q>L | No |
ClinGen Ensembl |
|
|
rs1554162619 CA361313995 |
31 | L>H | No |
ClinGen gnomAD |
|
|
CA361314027 rs1315511579 |
32 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA3451682 rs202010088 |
33 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs199956165 CA3451683 |
34 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781925229 CA3451685 |
35 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361314094 rs192388233 |
35 | V>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs192388233 CA3451684 |
35 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451688 rs781978731 |
36 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361314123 rs781978731 |
36 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451687 rs782345986 |
36 | S>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 36 | S>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 38 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361314183 rs868939117 |
38 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 38 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451690 rs543814850 |
39 | A>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1469075244 CA361314224 |
40 | K>R | No |
ClinGen TOPMed |
|
|
rs782726206 CA3451693 |
42 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs782048898 CA3451692 |
42 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs782726206 CA361314270 |
42 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs781820629 CA3451694 |
43 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs782097851 CA3451695 |
44 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs781873875 CA3451698 CA3451697 |
45 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA361314347 rs1262436049 |
46 | G>D | No |
ClinGen TOPMed |
|
|
rs781799282 CA3451700 |
47 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1554162716 COSM448816 CA361314368 |
47 | R>H | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA361314373 rs1554162716 |
47 | R>L | No |
ClinGen gnomAD |
|
|
rs782617385 CA3451702 |
48 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA3451703 rs782232383 |
48 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1485152117 CA361314398 |
49 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1485152117 COSM1594814 COSM1062303 CA361314392 |
49 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA361314407 COSM1062304 rs1554162740 |
49 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA361314428 rs1204781858 |
50 | Q>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 51 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 52 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451706 rs782291113 |
53 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA128378236 CA361314476 rs976245495 |
53 | G>R | No |
ClinGen gnomAD |
|
|
rs782308224 CA3451707 |
54 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451708 rs782020247 |
56 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451709 rs782135758 |
57 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1581880661 CA361314610 |
60 | V>G | No |
ClinGen Ensembl |
|
| TCGA novel | 61 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451710 rs201493000 |
61 | Q>P | No |
ClinGen 1000Genomes ESP TOPMed gnomAD |
|
|
CA3451712 rs782369184 |
62 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA128378242 rs950790626 COSM3776289 COSM3776290 |
62 | R>H | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs950790626 CA361314655 |
62 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3451714 rs782078089 |
63 | L>Q | No |
ClinGen ExAC |
|
|
rs781970349 CA3451713 |
63 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs782726122 CA3451715 |
65 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA3451716 rs781788461 |
65 | R>Q | No |
ClinGen ExAC |
|
|
CA361314691 rs782726122 |
65 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361314717 rs1581882567 |
66 | V>G | No |
ClinGen Ensembl |
|
|
CA361314733 rs1403563775 |
67 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA128378255 rs985203011 |
67 | A>P | No |
ClinGen Ensembl |
|
|
CA361314736 rs1403563775 |
67 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs367976285 CA128378258 |
68 | S>C | No |
ClinGen Ensembl |
|
|
rs782161322 CA3451720 |
70 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1373742506 CA361314809 |
72 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1169893950 CA361314827 CA361314825 |
73 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361314838 rs1581884799 |
74 | L>P | No |
ClinGen Ensembl |
|
|
rs1426806563 CA361314833 |
74 | L>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 75 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554162906 CA361314863 |
76 | E>G | No |
ClinGen gnomAD |
|
|
CA361314878 rs1554162910 |
77 | V>L | No |
ClinGen gnomAD |
|
|
rs781863950 CA3451722 |
78 | N>S | No |
ClinGen ExAC |
|
|
rs782505088 CA3451723 |
80 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs540952410 CA3451724 |
81 | N>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs540952410 CA361314932 |
81 | N>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781810947 CA361314941 |
81 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782687742 CA3451727 |
82 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451726 rs782437200 |
82 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs782687742 CA361314951 |
82 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1197202286 CA361314955 |
83 | I>V | No |
ClinGen TOPMed |
|
|
rs782282863 CA3451728 |
84 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA361314969 rs1562627023 |
84 | L>V | No |
ClinGen Ensembl |
|
|
rs1250379186 CA361315017 |
86 | V>A | No |
ClinGen TOPMed |
|
|
CA361315032 rs1201912812 |
87 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3451730 rs559164668 |
90 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 91 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs937991513 CA128378286 |
91 | D>Y | No |
ClinGen Ensembl |
|
|
rs1055077118 CA128378288 |
92 | R>S | No |
ClinGen TOPMed |
|
|
rs1315666503 CA361315111 |
93 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs781932514 CA3451734 |
94 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs781932514 CA3451733 |
94 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA128378298 rs949262123 |
96 | C>G | No |
ClinGen gnomAD |
|
|
CA3451736 rs372231398 |
97 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361315196 rs1380348501 |
98 | Q>* | No |
ClinGen TOPMed |
|
|
rs782754440 CA3451738 |
98 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA3451739 rs782134920 CA361315224 |
99 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs188796483 CA3451740 |
100 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451741 rs782029332 |
102 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781906273 CA3451742 |
103 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361315281 rs1554163034 |
103 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782550413 CA3451743 |
106 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451744 rs782783919 |
107 | E>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 108 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451748 rs73793507 |
109 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA128378327 rs1006497068 |
109 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3451745 rs781860422 |
109 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA361315377 rs1562628312 |
110 | V>A | No |
ClinGen Ensembl |
|
|
CA3451749 rs782430805 |
110 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1554163053 CA361315387 |
111 | D>G | No |
ClinGen gnomAD |
|
|
rs749429632 CA128378372 |
113 | P>A | No |
ClinGen Ensembl |
|
|
CA128378390 rs966295910 |
116 | V>G | No |
ClinGen Ensembl |
|
|
CA361315442 rs1562628506 |
116 | V>L | No |
ClinGen Ensembl |
|
|
rs1554163081 CA361315480 |
118 | H>Q | No |
ClinGen TOPMed |
|
|
CA3451752 rs782269395 |
118 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA3451753 rs372195509 |
120 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361315510 rs1554163094 |
120 | N>K | No |
ClinGen gnomAD |
|
|
CA361315518 rs1291817814 |
121 | V>G | No |
ClinGen TOPMed |
|
|
CA128378398 rs1026448396 |
121 | V>M | No |
ClinGen gnomAD |
|
|
CA361315535 rs781981842 |
122 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1221686748 CA361315533 |
122 | E>V | No |
ClinGen TOPMed |
|
|
CA361315546 rs1554163114 |
123 | V>A | No |
ClinGen gnomAD |
|
|
rs530490517 CA3451755 |
125 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs530490517 CA3451756 |
125 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781927972 CA3451757 |
126 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3451760 rs782167038 |
127 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA3451763 rs373157192 |
128 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782005031 CA3451761 |
128 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA361315637 rs1581895334 |
129 | N>T | No |
ClinGen Ensembl |
|
|
rs1554163155 CA361315659 |
131 | P>S | No |
ClinGen gnomAD |
|
|
rs200485559 CA128378430 |
133 | F>Y | No |
ClinGen 1000Genomes |
|
|
CA361315703 rs959374162 |
134 | S>* | No |
ClinGen TOPMed gnomAD |
|
|
CA128378433 rs959374162 |
134 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361315706 rs959374162 |
134 | S>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA3451766 rs782699561 |
135 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs199564677 CA3451768 |
136 | R>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451767 rs199564677 |
136 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361315733 rs1160788033 |
136 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3451769 rs782635875 |
137 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs782236624 CA3451770 |
140 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451772 rs782592420 |
142 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs782191099 CA3451773 |
143 | A>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361315814 rs1156538329 |
143 | A>T | No |
ClinGen TOPMed |
|
|
rs782191099 COSM3768171 COSM3768172 CA128378441 |
143 | A>V | liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361315827 rs1481186054 |
144 | E>* | No |
ClinGen TOPMed |
|
|
rs566327842 CA128378452 |
144 | E>D | No |
ClinGen 1000Genomes |
|
|
CA128378457 COSM1722457 rs551651050 COSM1722456 |
145 | S>C | NS Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs782023058 CA3451776 |
146 | K>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 146 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554163218 CA361315862 |
147 | Q>* | No |
ClinGen gnomAD |
|
|
CA128378466 rs201504685 |
148 | S>* | No |
ClinGen 1000Genomes TOPMed |
|
|
rs537127263 CA3451778 |
150 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs570153514 CA3451777 |
150 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361315941 rs537127263 |
150 | S>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3451779 rs781968482 |
153 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361316008 rs1554163237 |
155 | E>D | No |
ClinGen gnomAD |
|
|
CA361315997 rs782325882 |
155 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs782325882 CA3451781 |
155 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA128378482 rs1042691818 |
155 | E>V | No |
ClinGen Ensembl |
|
|
CA3451782 rs200465902 |
156 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451783 rs782163731 |
157 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA128378486 rs375272234 |
157 | A>T | No |
ClinGen TOPMed |
|
|
CA128378495 rs774391357 |
158 | S>C | No |
ClinGen Ensembl |
|
|
rs1325973038 CA361316063 |
159 | D>E | No |
ClinGen TOPMed |
|
|
CA128378497 rs936485472 |
160 | A>V | No |
ClinGen gnomAD |
|
|
CA361316103 rs1404476349 |
162 | I>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361316101 rs1404476349 |
162 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA361316096 rs1581901588 |
162 | I>V | No |
ClinGen Ensembl |
|
|
CA3451786 rs782105068 |
163 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs372301742 CA3451785 |
163 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3451787 rs782754801 |
166 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361316213 rs1554163287 |
169 | T>I | No |
ClinGen gnomAD |
|
|
CA3451793 rs373081906 |
171 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554163306 CA361316269 |
171 | R>S | No |
ClinGen gnomAD |
|
|
rs1554163296 CA361316264 |
171 | R>W | No |
ClinGen gnomAD |
|
|
CA361316273 rs782525218 |
172 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 175 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1562631338 CA361316352 |
175 | N>K | No |
ClinGen Ensembl |
|
| TCGA novel | 175 | N>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451796 rs376162708 |
177 | Y>C | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1193832073 CA361316467 |
180 | L>V | No |
ClinGen TOPMed |
|
| TCGA novel | 181 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451798 rs782595471 |
186 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782182212 CA3451799 |
186 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451800 rs782419090 |
187 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1461591468 CA361316680 |
189 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs540975019 CA3451801 |
189 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 191 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1040647730 CA128378544 |
191 | R>T | No |
ClinGen Ensembl |
|
|
CA3451802 rs782130952 |
195 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs902099652 CA128378547 |
196 | L>* | No |
ClinGen Ensembl |
|
|
CA3451803 rs782372405 |
197 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA128378550 rs552852780 |
198 | K>N | No |
ClinGen 1000Genomes |
|
|
rs10071369 CA3451807 |
199 | S>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451805 rs782072995 |
199 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs10071369 VAR_048538 CA3451806 |
199 | S>Y | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA361316905 rs1271953937 |
201 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA128378566 rs886632465 |
206 | P>L | No |
ClinGen Ensembl |
|
|
CA3451808 rs782155135 |
207 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA361317041 rs1326402140 |
208 | L>F | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 209 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361317070 rs1319130298 |
209 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA361317059 rs1554163384 |
209 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782783003 CA3451809 |
210 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs1454972321 CA361317105 |
212 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs782611153 CA3451812 |
213 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA361317155 rs1554163400 |
215 | T>K | No |
ClinGen gnomAD |
|
|
CA361317158 rs1554163400 |
215 | T>R | No |
ClinGen gnomAD |
|
|
rs1016375825 CA128378613 |
216 | D>N | No |
ClinGen TOPMed |
|
|
rs1467855920 CA361317174 |
216 | D>V | No |
ClinGen TOPMed |
|
|
rs1398153775 CA361317191 CA361317188 |
217 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA361317192 rs1398153775 |
217 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
CA3451815 rs563116049 |
218 | G>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361317208 rs1168032645 |
218 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782673770 CA3451816 |
220 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs376277801 CA3451817 |
221 | E>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554163420 CA361317260 |
221 | E>K | No |
ClinGen gnomAD |
|
|
CA361317313 rs1554163429 |
223 | T>I | No |
ClinGen gnomAD |
|
|
CA361317315 rs1554163437 |
224 | G>S | No |
ClinGen gnomAD |
|
|
CA3451819 rs184691375 |
225 | T>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554163444 CA361317361 |
226 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs990827650 CA361317387 |
227 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
COSM1434004 rs990827650 CA128378633 |
227 | R>Q | lung Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA3451823 rs782296742 |
227 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554163459 CA361317399 |
228 | L>P | No |
ClinGen gnomAD |
|
|
CA361317403 rs782425741 |
229 | L>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 231 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451827 rs782748267 |
232 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs1562634037 CA361317475 |
232 | V>I | No |
ClinGen Ensembl |
|
|
rs545569437 CA3451831 |
235 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3451833 rs782789559 |
237 | D>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 240 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 241 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451835 rs782478328 |
244 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451836 CA3451837 rs374182289 |
245 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782569950 CA3451838 |
246 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361317803 rs782569950 |
246 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1408875478 CA361317905 |
250 | S>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1368092611 CA361317937 |
252 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1554163543 CA361317933 |
252 | M>T | No |
ClinGen gnomAD |
|
|
rs1554163548 CA361317964 |
254 | N>T | No |
ClinGen gnomAD |
|
|
rs1554163562 CA361317994 |
255 | A>D | No |
ClinGen gnomAD |
|
|
CA361317986 rs1165429955 |
255 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA361318023 rs1384511373 |
256 | A>V | No |
ClinGen TOPMed |
|
|
rs781975601 CA3451842 |
259 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA361318113 rs1181573683 |
260 | L>P | No |
ClinGen TOPMed |
|
|
CA3451843 rs782219538 |
262 | L>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 262 | L>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361318191 rs1234875307 |
264 | L>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs375422597 CA3451844 |
264 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781921753 CA3451845 |
265 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
rs189065461 CA361318301 |
269 | R>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM1062312 CA3451848 rs781996593 COSM1594836 |
269 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs782111162 CA361318349 |
270 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782742972 COSM283784 CA3451850 |
271 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1554163605 CA361318418 |
273 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3451851 rs781820550 |
275 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361318493 rs1291685236 |
277 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1554163630 CA361318509 |
278 | T>I | No |
ClinGen gnomAD |
|
|
rs377186222 CA3451853 |
279 | Y>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 279 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs528075021 CA3451855 |
281 | L>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782647258 CA3451856 |
282 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs781865487 CA3451857 |
284 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1440976469 CA361318616 |
285 | K>E | No |
ClinGen TOPMed |
|
|
CA3451858 rs782483772 |
285 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1554163660 CA361318663 |
287 | N>H | No |
ClinGen gnomAD |
|
|
CA128378759 rs546576795 |
287 | N>K | No |
ClinGen 1000Genomes TOPMed |
|
|
rs782588471 CA3451859 |
287 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA361318712 rs1562636229 |
288 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs147407508 CA3451861 |
289 | R>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451862 rs782424515 |
290 | H>L | No |
ClinGen ExAC gnomAD |
|
|
rs782664221 CA361318752 |
290 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1562636456 CA361318763 |
291 | L>S | No |
ClinGen Ensembl |
|
|
CA3451864 rs782258774 |
293 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451865 rs782366114 |
294 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA3451866 rs781968863 |
295 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1162587306 CA361318893 |
298 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3451869 rs781915766 |
299 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs782322898 CA3451868 |
299 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs782788057 CA3451871 |
300 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1006397532 CA128378807 |
301 | V>A | No |
ClinGen Ensembl |
|
|
CA3451872 rs374513388 |
301 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3451873 rs782103858 |
304 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554163708 CA361319009 |
305 | G>* | No |
ClinGen gnomAD |
|
|
rs1554163708 CA361319004 |
305 | G>R | No |
ClinGen gnomAD |
|
|
CA3451876 rs782441014 |
306 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3451875 rs371365026 |
306 | T>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3451877 rs782684247 |
307 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1554163715 CA361319031 |
307 | L>V | No |
ClinGen gnomAD |
|
|
rs1562637357 COSM1434006 CA361319048 |
308 | D>Y | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA361319078 rs1201766971 |
309 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
CA361319123 rs1490530166 |
311 | E>G | No |
ClinGen TOPMed |
|
|
CA3451878 rs781886107 |
312 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1268813918 CA361319136 |
312 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1562637589 CA361319179 |
314 | F>L | No |
ClinGen Ensembl |
|
|
rs1581926444 CA361319173 |
314 | F>S | No |
ClinGen Ensembl |
|
|
CA3451879 rs782520778 |
317 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361319225 rs895309313 |
317 | I>M | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 317 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451880 rs782629825 |
317 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs782520778 CA361319217 |
317 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361319226 rs868919509 |
318 | E>K | No |
ClinGen Ensembl |
|
|
rs1554163774 CA361319268 |
320 | Q>R | No |
ClinGen gnomAD |
|
|
rs782336770 CA3451882 |
323 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554163779 CA361320639 |
323 | D>Y | No |
ClinGen gnomAD |
|
| TCGA novel | 326 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361320764 rs1284806343 |
327 | P>L | No |
ClinGen TOPMed |
|
|
rs1326686779 CA361320745 |
327 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs200687541 CA3451887 |
328 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3451886 rs200687541 |
328 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3451888 rs782364525 |
329 | M>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361320782 rs782364525 |
329 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361320791 rs1562638307 |
330 | A>T | No |
ClinGen Ensembl |
|
|
CA3451889 rs181372298 |
332 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361320874 rs1554163812 |
333 | C>R | No |
ClinGen gnomAD |
|
|
CA361320877 rs1345689033 |
333 | C>Y | No |
ClinGen TOPMed |
|
|
CA3451890 rs782066407 |
334 | T>R | No |
ClinGen ExAC gnomAD |
|
|
CA361320926 rs1581930222 |
335 | V>G | No |
ClinGen Ensembl |
|
|
rs112749867 CA361320939 |
336 | W>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA3451891 rs570133503 |
336 | W>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs112749867 CA128378860 |
336 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
rs782151190 CA3451893 |
337 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs781902121 CA3451892 |
337 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs781902121 CA361320942 |
337 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1581931326 CA361320976 |
338 | E>G | No |
ClinGen Ensembl |
|
|
CA3451895 rs782777018 |
341 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 341 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361321138 rs371110623 |
343 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782486118 CA3451897 |
343 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781855370 CA3451896 |
343 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554163840 CA361321232 |
345 | N>T | No |
ClinGen TOPMed |
|
|
CA3451900 rs782428763 |
347 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA361321448 rs1554163855 |
351 | V>A | No |
ClinGen gnomAD |
|
|
CA361321442 rs1243170344 |
351 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1243170344 CA361321443 |
351 | V>M | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 352 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1463817234 CA361321465 |
352 | T>S | No |
ClinGen TOPMed |
|
|
rs745813666 CA128378880 |
353 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 354 | L>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361321518 rs1223679164 |
354 | L>F | No |
ClinGen TOPMed |
|
|
rs558780713 CA3451904 |
356 | L>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3451906 rs184228916 |
359 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451905 rs184228916 |
359 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451907 rs368166956 |
362 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554163883 CA361321659 |
363 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1432649344 CA361321698 |
364 | P>L | No |
ClinGen TOPMed |
|
|
rs377755323 CA3451909 |
366 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451910 rs377755323 |
366 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782746068 CA3451912 |
367 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554163888 CA361321758 |
367 | V>I | No |
ClinGen gnomAD |
|
|
CA3451914 rs782061977 |
368 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs1554163904 CA361321800 |
368 | I>S | No |
ClinGen gnomAD |
|
|
rs1174096449 CA361321826 |
369 | A>V | No |
ClinGen TOPMed |
|
|
CA361321858 rs1554163914 |
371 | I>M | No |
ClinGen gnomAD |
|
|
CA361321867 rs911086777 |
372 | S>G | No |
ClinGen TOPMed |
|
|
rs911086777 CA128378907 |
372 | S>R | No |
ClinGen TOPMed |
|
|
CA361321891 rs1188426625 |
372 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1554163925 CA361321903 |
373 | V>A | No |
ClinGen gnomAD |
|
|
rs1554163925 CA361321900 |
373 | V>E | No |
ClinGen gnomAD |
|
|
CA3451915 rs199741132 |
373 | V>M | Variant assessed as Somatic; 0.0003695 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs942533344 CA128378911 |
374 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3451917 rs781897836 |
376 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451918 rs782759965 |
376 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1650280 COSM590028 rs781897836 CA3451916 |
376 | R>S | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3451919 rs781847723 |
379 | G>D | No |
ClinGen ExAC |
|
| TCGA novel | 379 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361322120 rs1554163936 |
380 | V>D | No |
ClinGen gnomAD |
|
|
rs782478787 CA3451920 |
380 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA361322180 rs1562640720 |
383 | Q>E | No |
ClinGen Ensembl |
|
|
rs782545691 CA3451923 |
383 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA3451924 rs782678686 |
384 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA361322234 rs1554163963 |
385 | T>I | No |
ClinGen gnomAD |
|
|
CA3451925 rs782261095 |
386 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1581940012 CA361322281 |
387 | S>L | No |
ClinGen Ensembl |
|
|
rs782376161 CA3451926 |
388 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA361322362 rs1554163984 |
391 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs367959983 CA3451928 |
392 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361322407 rs1384752166 |
393 | P>L | No |
ClinGen TOPMed |
|
|
rs1315531348 CA361322442 |
394 | F>L | No |
ClinGen TOPMed |
|
|
rs782159013 CA3451931 |
397 | V>M | No |
ClinGen ExAC |
|
|
rs1037957284 CA128378934 |
398 | S>A | No |
ClinGen TOPMed |
|
|
CA3451932 rs782782375 |
398 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451933 rs62622798 |
399 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782099481 CA3451934 |
400 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782752756 CA3451935 |
401 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs201733980 CA3451936 |
401 | K>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361322679 CA361322677 rs1423582702 |
403 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
CA361322658 rs1184662924 |
403 | Y>H | No |
ClinGen TOPMed |
|
|
rs143855054 CA3451937 |
403 | Y>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361322725 rs1253656655 |
404 | Y>S | No |
ClinGen TOPMed |
|
|
CA3451938 rs782216904 |
405 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1178506832 CA361322736 |
405 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA3451939 rs782216904 |
405 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361322763 rs1554164064 |
406 | L>F | No |
ClinGen gnomAD |
|
|
CA3451941 rs782623881 |
406 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361322767 rs1554164069 |
407 | V>M | No |
ClinGen gnomAD |
|
|
rs189730532 CA3451942 |
409 | D>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs180868237 CA361322920 |
411 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3451946 rs180868237 |
411 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA361323052 rs375366430 |
414 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128378960 rs375366430 |
414 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782661960 CA3451949 |
414 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA3451948 COSM3409847 rs375366430 COSM3409846 |
414 | R>S | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA361323107 rs1310856864 |
415 | E>G | No |
ClinGen TOPMed |
|
|
rs782365260 CA3451951 |
415 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1554164130 CA361323167 |
416 | N>D | No |
ClinGen gnomAD |
|
|
CA128378972 rs958022470 |
416 | N>K | No |
ClinGen gnomAD |
|
|
CA3451953 rs200002785 |
416 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451956 rs782038424 |
417 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs782072957 CA3451955 |
417 | V>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782072957 CA3451954 COSM1541920 |
417 | V>M | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs17119218 VAR_048539 CA3451957 |
418 | W>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs201159213 CA3451958 |
419 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361323250 rs201159213 |
419 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3451959 rs781862161 |
419 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148608291 CA3451961 |
421 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1419353241 CA361323381 |
423 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA3451963 rs782448077 |
424 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 425 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451965 rs369162861 |
426 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3451966 COSM3702725 rs373356425 COSM3702724 |
426 | A>V | Variant assessed as Somatic; 0.0 impact. liver [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs782627889 CA3451967 |
427 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361323552 rs1209102528 |
428 | D>G | No |
ClinGen TOPMed |
|
|
CA3451968 rs548890657 |
428 | D>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1262225558 CA361323573 |
429 | G>E | No |
ClinGen TOPMed |
|
|
CA361323566 rs1487402100 |
429 | G>R | No |
ClinGen TOPMed |
|
|
rs1581951025 CA361323592 |
430 | G>C | No |
ClinGen Ensembl |
|
|
rs1330154432 CA361323594 |
430 | G>D | No |
ClinGen TOPMed |
|
|
rs1554164197 CA361323623 |
431 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1554164199 CA361323648 |
432 | P>S | No |
ClinGen gnomAD |
|
|
rs78902732 CA128379027 |
435 | W>* | No |
ClinGen Ensembl |
|
|
CA361323728 rs1554164208 |
435 | W>G | No |
ClinGen gnomAD |
|
|
CA128379029 rs77838799 |
436 | A>D | No |
ClinGen Ensembl |
|
|
CA3451972 rs200037363 |
437 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3451973 rs200037363 |
437 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 438 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451975 CA3451976 rs371557347 |
439 | R>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD NCI-TCGA |
|
rs782065685 CA361323869 |
440 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451977 rs782065685 |
440 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs531014522 CA361323923 |
441 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs782689834 CA3451978 |
441 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs531014522 CA3451979 |
441 | S>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3451981 rs782773036 |
443 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368823990 CA361323974 |
443 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3451983 rs782478068 |
445 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554164263 CA361324027 |
445 | A>V | No |
ClinGen gnomAD |
|
|
rs374343977 CA361324033 |
446 | D>H | No |
ClinGen ESP ExAC gnomAD |
|
|
CA3451985 rs374343977 |
446 | D>N | No |
ClinGen ESP ExAC gnomAD |
|
|
rs374343977 CA3451986 |
446 | D>Y | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1207012137 CA361324080 |
447 | V>G | No |
ClinGen TOPMed |
|
|
CA361324052 rs1562644426 |
447 | V>M | No |
ClinGen Ensembl |
|
| TCGA novel | 448 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 449 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3451987 rs782659070 |
450 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs782258990 CA361324154 |
450 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3451989 rs782508076 |
451 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs782622577 COSM3786855 COSM3786854 CA3451990 |
451 | A>V | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1554164294 CA361324213 |
453 | A>E | No |
ClinGen gnomAD |
|
|
CA3451994 rs782290244 |
456 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA3451995 rs782403878 |
457 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1232580918 CA361324324 |
457 | P>R | No |
ClinGen TOPMed |
|
|
CA361324331 rs1554164304 |
458 | E>K | No |
ClinGen gnomAD |
|
|
rs782114058 CA3451997 |
459 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA361324411 rs1329928274 |
460 | T>A | No |
ClinGen TOPMed |
|
|
CA361324418 rs1298357431 |
460 | T>N | No |
ClinGen TOPMed |
|
|
rs1329928274 CA361324408 |
460 | T>P | No |
ClinGen TOPMed |
|
|
CA361324462 rs1388283363 |
461 | V>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 461 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3452002 rs781889223 |
463 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA3452001 rs372818492 |
463 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs782514435 CA3452003 |
464 | K>* | No |
ClinGen ExAC gnomAD |
|
|
CA3452004 rs782779572 |
464 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA361324579 rs1562645434 |
466 | N>I | No |
ClinGen Ensembl |
|
|
rs781840750 CA3452005 |
467 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3452006 rs782464928 |
467 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1581959991 CA361324605 |
467 | N>T | No |
ClinGen Ensembl |
|
|
CA361324657 rs1554164342 |
470 | G>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782552456 CA3452009 |
470 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA3452010 rs568100247 |
471 | C>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361324668 rs1554164347 |
471 | C>R | No |
ClinGen gnomAD |
|
|
rs1476746131 CA361324670 |
471 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs199940622 CA3452011 |
472 | H>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782364094 CA361324703 |
473 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782364094 CA3452012 |
473 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361324701 rs1581961596 |
473 | I>V | No |
ClinGen Ensembl |
|
|
rs1554164360 CA361324725 |
474 | F>S | No |
ClinGen gnomAD |
|
|
rs1185177447 CA361324783 |
477 | S>* | No |
ClinGen TOPMed |
|
|
CA361324785 rs1185177447 |
477 | S>L | No |
ClinGen TOPMed |
|
| TCGA novel | 478 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1279597936 CA361324799 |
478 | A>P | No |
ClinGen TOPMed |
|
|
CA3452015 rs782205013 |
478 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3452018 rs367673976 |
479 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs367673976 CA3452019 |
479 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs539269989 CA3452017 |
479 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3452020 rs781984897 |
480 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA128379099 rs1029944968 |
481 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3452021 rs373404464 |
482 | D>G | No |
ClinGen ESP ExAC gnomAD |
|
|
CA361324926 rs1554164401 |
483 | A>G | No |
ClinGen gnomAD |
|
|
CA361324915 rs371515299 |
483 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3452022 rs371515299 |
483 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1261237 CA3452023 rs371515299 |
483 | A>T | oesophagus [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
| TCGA novel | 484 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361324945 rs1554164402 |
484 | Q>R | No |
ClinGen gnomAD |
|
|
CA361324967 rs1554164412 |
485 | E>G | No |
ClinGen gnomAD |
|
|
rs782048917 CA3452024 |
485 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs544569992 COSM1186852 CA3452025 |
486 | N>K | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1333019449 CA361325019 |
487 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1554164416 CA361325013 |
487 | A>S | No |
ClinGen gnomAD |
|
|
rs1554164425 CA361325034 |
488 | L>P | No |
ClinGen gnomAD |
|
|
rs1554164428 CA361325046 |
489 | V>L | No |
ClinGen gnomAD |
|
|
CA3452030 rs782477275 |
490 | S>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 491 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1429082420 CA361325082 |
491 | Y>H | No |
ClinGen TOPMed |
|
|
CA361325148 rs782563992 |
494 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA3452031 rs782563992 |
494 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs1185262788 CA361325166 |
495 | E>V | No |
ClinGen TOPMed |
|
|
CA361325190 rs1238282556 |
496 | R>Q | No |
ClinGen TOPMed |
|
|
rs1445004841 CA361325188 |
496 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA128379107 rs991131905 |
497 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs991131905 CA361325217 |
497 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA361325207 rs991131905 COSM1647779 COSM736158 |
497 | R>Q | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
COSM3783859 rs202164332 CA3452032 COSM3783858 |
497 | R>W | prostate [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3452034 rs573002634 |
498 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1273087028 CA361325232 |
499 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3452035 rs782250124 |
500 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554164453 CA361325244 |
500 | D>N | No |
ClinGen gnomAD |
|
|
rs376574285 CA361325281 |
501 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1445292626 COSM1434014 CA361325286 |
501 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs376574285 CA3452036 |
501 | R>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1408684171 CA361325305 |
502 | A>G | No |
ClinGen TOPMed |
|
|
rs782060261 CA3452038 |
502 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 502 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 503 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3452039 rs782305059 |
504 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs1562647895 CA361325335 |
504 | S>P | No |
ClinGen Ensembl |
|
|
CA3452041 rs369764178 |
507 | V>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs377101052 CA361325402 |
507 | V>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs377101052 CA3452040 COSM1219543 |
507 | V>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC gnomAD |
|
CA3452042 rs782773688 |
508 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3452043 rs782773688 |
508 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361325441 rs1554164498 |
510 | H>D | No |
ClinGen gnomAD |
|
|
CA3452045 rs782716769 |
511 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361325469 rs1365729454 |
511 | A>V | No |
ClinGen TOPMed |
|
|
CA361325492 rs1183077255 |
512 | E>D | No |
ClinGen TOPMed |
|
|
CA3452046 rs373909591 |
513 | S>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782549928 CA3452047 |
514 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782672271 CA3452048 |
514 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs782549928 CA361325509 |
514 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361325550 rs533111347 |
516 | V>L | No |
ClinGen TOPMed |
|
|
rs533111347 CA128379119 |
516 | V>M | No |
ClinGen TOPMed |
|
|
rs1225314899 CA361325564 |
517 | Y>C | No |
ClinGen TOPMed |
|
|
CA361325572 rs1554164527 |
518 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782506518 CA3452050 |
518 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA3452053 rs782328974 |
521 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782353440 CA3452059 |
523 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs782000668 CA3452057 |
523 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782000668 CA3452058 |
523 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs893862947 CA128379131 |
524 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA361325642 rs1554164562 |
524 | H>Y | No |
ClinGen gnomAD |
|
|
CA361325659 TCGA novel rs1304914174 |
525 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen TOPMed |
|
rs561705674 CA3452060 |
525 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3452061 rs561705674 |
525 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs202117527 CA3452062 |
526 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361325684 rs1554164590 |
528 | E>K | No |
ClinGen gnomAD |
|
|
rs1349209235 CA361325703 |
529 | L>R | No |
ClinGen TOPMed |
|
|
CA361325713 rs1321391908 |
530 | L>P | No |
ClinGen TOPMed |
|
|
CA3452065 rs782770549 |
534 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA361325766 rs782770549 |
534 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA128379141 rs899824906 |
534 | V>L | No |
ClinGen TOPMed |
|
|
CA361325759 rs899824906 |
534 | V>M | No |
ClinGen TOPMed |
|
|
rs781841032 CA3452066 CA361325774 |
535 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782475792 CA3452067 |
536 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs782475792 COSM3409848 COSM3409849 CA361325775 |
536 | A>T | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3452068 rs782716335 |
536 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3452070 rs201937079 |
538 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554164627 CA361325799 |
538 | D>Y | No |
ClinGen gnomAD |
|
|
CA361325816 rs782257127 |
539 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3452072 rs782257127 |
539 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361325831 rs1554164638 |
540 | G>A | No |
ClinGen gnomAD |
|
|
CA361325833 rs1554164638 |
540 | G>D | No |
ClinGen gnomAD |
|
|
rs140203389 CA3452074 |
541 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs140203389 CA3452075 |
541 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs531202250 CA3452077 |
542 | P>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3452078 rs531202250 |
542 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 542 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3452081 rs782095287 |
543 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA361325855 rs782095287 |
543 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs782055886 CA3452084 |
544 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1581980988 CA361325861 |
544 | L>V | No |
ClinGen Ensembl |
|
|
rs201357017 COSM1541917 CA3452085 |
545 | S>G | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
| TCGA novel | 545 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374520361 CA3452086 |
547 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3452089 rs781831995 |
548 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA361325906 COSM1541916 CA3452087 rs369212308 |
548 | V>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD NCI-TCGA |
|
rs369212308 CA3452088 |
548 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3452090 rs782462608 |
549 | T>A | No |
ClinGen ExAC |
|
|
rs1321490350 CA361325949 |
552 | V>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361325960 rs1456957620 |
553 | F>S | No |
ClinGen TOPMed |
|
|
CA361325968 rs1386684596 CA361325967 |
554 | V>L | No |
ClinGen TOPMed |
|
|
rs190430267 CA3452091 |
555 | L>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs370490786 CA361325997 CA361325996 |
556 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361325985 rs1554164692 |
556 | D>H | No |
ClinGen gnomAD |
|
|
CA361326005 rs1554164699 |
557 | E>A | No |
ClinGen gnomAD |
|
|
CA3452093 rs782539037 |
557 | E>D | No |
ClinGen ExAC TOPMed |
|
|
CA3452095 rs782661485 |
558 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA3452099 rs374163229 |
561 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374163229 CA3452098 |
561 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 561 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361326065 rs782319322 |
562 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782319322 CA3452101 |
562 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3452100 rs782200395 |
562 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA361326076 rs1581985607 |
563 | A>V | No |
ClinGen Ensembl |
|
|
rs1581985922 CA361326088 |
565 | L>V | No |
ClinGen Ensembl |
|
|
rs1264615398 CA361326099 |
566 | A>E | No |
ClinGen TOPMed |
|
|
rs1311031348 CA361326115 |
568 | Q>E | No |
ClinGen TOPMed |
|
|
rs546684407 CA3452104 |
568 | Q>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs546684407 CA3452103 |
568 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs368477795 CA128379176 |
569 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
| TCGA novel | 570 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782095168 CA3452106 |
572 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128379186 rs372502721 |
572 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs782742871 CA3452107 |
573 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA361326168 CA361326167 rs1554164732 |
573 | G>R | No |
ClinGen gnomAD |
|
|
CA361326179 rs1296646483 |
574 | G>D | No |
ClinGen TOPMed |
|
|
rs971082881 CA128379188 |
574 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA3452108 rs781804523 |
575 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA3452109 rs782048793 |
575 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782800341 CA3452110 |
577 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1304748663 CA361326219 |
578 | K>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1304748663 CA361326220 |
578 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs782610375 CA361326229 |
578 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375475405 CA3452112 |
578 | K>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1358609489 CA361326235 |
579 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs781830221 CA3452114 |
580 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA3452115 rs782454963 |
581 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 582 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs368769297 CA3452116 |
582 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1562652583 CA361326273 |
583 | S>W | No |
ClinGen Ensembl |
|
|
CA361326276 rs1554164757 |
584 | V>L | No |
ClinGen gnomAD |
|
|
CA128379206 rs928223797 |
585 | G>V | No |
ClinGen Ensembl |
|
|
CA3452118 rs782404408 |
586 | A>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 586 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3452122 rs371526005 |
589 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3452121 rs550915753 CA128379220 |
589 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361326333 rs1257856778 |
590 | V>L | No |
ClinGen TOPMed |
|
|
CA361326330 rs1257856778 |
590 | V>M | No |
ClinGen TOPMed |
|
|
CA361326346 rs1235290760 |
591 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361326349 rs1235290760 |
591 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA3452125 rs782030647 |
593 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA3452124 rs782304708 |
593 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs376620715 CA3452127 |
594 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3452128 rs376620715 |
594 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3452126 rs782137761 |
594 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA3452131 rs17844350 |
595 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs17844350 CA361326382 |
595 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs946837071 CA128379234 |
598 | A>E | No |
ClinGen Ensembl |
|
|
rs781950776 CA3452133 |
599 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 600 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554164810 CA361326453 |
601 | G>S | No |
ClinGen gnomAD |
|
|
rs782609021 CA361326485 |
603 | N>S | No |
ClinGen ExAC TOPMed |
|
|
rs782609021 CA3452136 |
603 | N>T | No |
ClinGen ExAC TOPMed |
|
|
rs369740429 CA128379250 |
604 | A>E | No |
ClinGen ESP |
|
|
rs933995054 CA128379249 |
604 | A>P | No |
ClinGen gnomAD |
|
|
COSM3768175 rs1562653740 COSM3768176 CA361326517 |
606 | L>F | liver [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA3452137 rs782215482 |
606 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361326541 rs782446287 CA3452138 |
608 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361326540 rs1411739835 |
608 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1554164841 CA361326534 |
608 | Y>H | No |
ClinGen gnomAD |
|
|
rs1554164841 CA361326532 |
608 | Y>N | No |
ClinGen gnomAD |
|
|
rs373236202 CA128379257 |
609 | E>D | No |
ClinGen ESP TOPMed |
|
|
CA128379254 rs1051468587 |
609 | E>Q | No |
ClinGen Ensembl |
|
|
rs1428252254 CA361326558 |
610 | L>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1428252254 CA361326560 |
610 | L>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1562654104 CA361326587 |
612 | P>R | No |
ClinGen Ensembl |
|
| TCGA novel | 612 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554164906 CA361326608 |
614 | A>E | No |
ClinGen gnomAD |
|
|
CA361326603 rs1422918699 |
614 | A>T | No |
ClinGen TOPMed |
|
|
CA361326631 rs1554164920 |
616 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782232980 CA3452144 |
617 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782342308 CA3452146 |
618 | R>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1434019 rs1554164932 CA361326671 |
618 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1554164932 CA361326677 |
618 | R>L | No |
ClinGen gnomAD |
|
|
rs1554164932 CA361326674 |
618 | R>P | No |
ClinGen gnomAD |
|
|
rs782342308 CA3452145 |
618 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1489353896 CA361326713 |
620 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1489353896 CA361326710 |
620 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1489353896 CA361326712 |
620 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA361326705 rs1554164938 |
620 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361326703 rs1554164938 |
620 | P>T | No |
ClinGen gnomAD |
|
|
rs782808360 CA3452148 |
622 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3452149 COSM1434020 rs782023174 |
622 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 624 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554164952 CA361326767 |
624 | G>W | No |
ClinGen gnomAD |
|
|
rs1554164955 CA361326823 |
627 | T>M | No |
ClinGen gnomAD |
|
|
rs782714479 CA3452154 |
630 | I>R | No |
ClinGen ExAC gnomAD |
|
|
rs782466247 CA3452153 |
630 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781790601 CA3452155 |
632 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782654281 CA3452157 |
634 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554164969 CA361326966 |
635 | A>V | No |
ClinGen gnomAD |
|
|
CA361327000 rs1554164974 |
637 | D>E | No |
ClinGen gnomAD |
|
|
rs1554164977 CA361327008 |
638 | E>* | No |
ClinGen gnomAD |
|
|
rs1554164977 CA361327003 |
638 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3452159 rs782482530 |
641 | S>A | No |
ClinGen ExAC |
|
|
rs375716587 CA3452160 |
641 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3452161 rs782198197 |
642 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3452162 rs782198197 |
642 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554164992 CA361327072 |
642 | P>S | No |
ClinGen gnomAD |
|
|
rs543880939 CA3452164 |
643 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs201299652 CA3452165 |
644 | H>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361327125 rs201299652 |
644 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3452166 rs781977409 |
645 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128379294 rs763700203 |
647 | L>Q | No |
ClinGen Ensembl |
|
| TCGA novel | 649 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361327266 rs1472650820 |
649 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA128379297 rs981101486 |
650 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA3452168 rs782721683 |
651 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs1179361194 CA361327335 |
652 | D>A | No |
ClinGen TOPMed gnomAD |
|
|
CA3452169 rs781936875 |
652 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA361327318 rs1554165044 |
652 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782751973 CA128379309 |
653 | H>Y | No |
ClinGen Ensembl |
|
|
CA3452171 rs377081112 |
654 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3452172 rs369373152 |
654 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3452170 rs377081112 |
654 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554165067 CA361327386 |
655 | E>K | No |
ClinGen gnomAD |
|
|
COSM1310666 COSM3827020 CA3452174 rs782499527 |
656 | P>L | Variant assessed as Somatic; 0.0 impact. urinary_tract breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3452175 rs782763189 |
657 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1062326 rs1330055406 CA361327553 |
661 | T>M | large_intestine Variant assessed as Somatic; impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs782465793 CA3452179 |
663 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1554165105 CA361328519 |
664 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3452181 rs202137231 |
667 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs202137231 CA3452182 |
667 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs202137231 CA361328633 |
667 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361328654 rs1554165125 |
668 | L>S | No |
ClinGen gnomAD |
|
|
rs1554165130 CA361328698 |
670 | E>G | No |
ClinGen gnomAD |
|
|
rs1554165136 CA361328718 |
671 | S>G | No |
ClinGen Ensembl |
|
|
CA3452185 rs200344692 CA361328731 |
671 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361328762 rs1554165149 |
672 | G>A | No |
ClinGen gnomAD |
|
|
rs1554165154 CA361328784 |
673 | Q>E | No |
ClinGen gnomAD |
|
|
CA361328806 rs1554165161 |
673 | Q>R | No |
ClinGen gnomAD |
|
|
rs782035990 CA3452190 |
674 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782312325 CA3452188 |
674 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs782035990 CA3452189 |
674 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3452191 rs782389088 |
676 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1156390839 CA361328913 |
677 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA3452193 rs782085001 |
679 | S>F | No |
ClinGen ExAC TOPMed |
|
|
CA361329037 rs1249708738 |
681 | T>I | No |
ClinGen TOPMed |
|
|
rs1554165205 CA361329005 |
681 | T>S | No |
ClinGen gnomAD |
|
|
rs1554165206 CA361329056 |
682 | L>F | No |
ClinGen gnomAD |
|
|
CA3452197 rs371368253 |
684 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781880372 CA3452198 |
684 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs200268029 CA361329124 |
685 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200268029 COSM1062327 CA3452200 COSM1594832 |
685 | A>T | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA361329155 rs1554165222 |
686 | A>G | No |
ClinGen Ensembl |
|
|
CA3452201 rs781816033 |
686 | A>S | No |
ClinGen ExAC |
|
|
CA128379348 rs1044550712 |
688 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs782460096 CA3452203 |
691 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361329387 rs782460096 |
691 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782405877 CA3452206 |
693 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA361329435 rs782405877 |
693 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA3452205 rs376198166 |
693 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3452207 rs782647681 |
694 | D>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 695 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776284157 CA128379371 |
695 | V>I | No |
ClinGen Ensembl |
|
|
rs370303558 CA3452210 |
696 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361329540 rs1554165248 |
696 | N>S | No |
ClinGen gnomAD |
|
|
CA3452211 rs782048235 |
697 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1582019516 CA361329562 |
697 | V>M | No |
ClinGen Ensembl |
|
|
rs782439866 CA3452213 |
698 | Y>C | No |
ClinGen ExAC |
|
|
rs561860727 CA3452215 |
700 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554165267 CA361329698 |
701 | I>T | No |
ClinGen gnomAD |
|
|
rs782698436 CA3452219 |
702 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA3452218 rs376600715 |
702 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781784103 CA3452220 |
703 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781784103 CA361329742 |
703 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3452222 rs782807102 |
705 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA128379397 rs1009797322 |
707 | S>C | No |
ClinGen Ensembl |
|
|
rs1009797322 CA361329886 |
707 | S>F | No |
ClinGen Ensembl |
|
|
rs371096811 CA128379398 |
710 | L>M | No |
ClinGen ESP TOPMed |
|
|
COSM1647778 CA361329990 rs1554165295 COSM736157 |
711 | V>L | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA3452223 rs781865422 |
712 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs200192228 CA3452224 |
712 | L>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3452225 rs782602807 |
713 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs1246479266 CA361330079 |
714 | L>V | No |
ClinGen TOPMed |
|
|
rs1340682715 CA361330140 |
715 | L>P | No |
ClinGen TOPMed |
|
|
rs782675743 CA3452228 |
716 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs1412384009 CA361330168 |
716 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1372338399 CA361330259 |
717 | Y>C | No |
ClinGen TOPMed |
|
|
rs782280300 CA3452229 |
717 | Y>N | No |
ClinGen ExAC gnomAD |
|
|
CA3452230 rs201468806 |
718 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs781990448 CA3452231 |
718 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361330355 rs1554165338 |
719 | A>V | No |
ClinGen gnomAD |
|
|
rs1554165343 CA361330381 |
721 | W>R | No |
ClinGen gnomAD |
|
|
rs782046462 CA3452235 |
722 | W>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782046462 CA361330439 |
722 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs368729446 CA3452234 |
722 | W>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361330472 rs1369255733 |
723 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1554165360 CA361330510 |
724 | A>V | No |
ClinGen gnomAD |
|
|
CA361330519 COSM1434023 rs1187011496 COSM3381124 |
725 | T>M | Variant assessed as Somatic; 0.0 impact. pancreas large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA3452238 COSM3768178 rs782125497 COSM3768177 |
727 | T>I | liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed |
|
CA3452239 rs782751803 |
728 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs955449203 CA128379430 |
729 | G>D | No |
ClinGen Ensembl |
|
|
CA361330655 rs1254609310 |
729 | G>S | No |
ClinGen TOPMed |
|
|
rs868973619 CA361330732 |
731 | C>Y | No |
ClinGen Ensembl |
|
|
rs781824958 CA361330751 |
732 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781824958 CA3452241 |
732 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA128379433 rs987284077 COSM3381126 COSM3381125 |
732 | A>V | pancreas Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs781904724 CA3452244 |
733 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1562661811 CA361330772 |
733 | P>S | No |
ClinGen Ensembl |
|
|
CA3452245 rs764735564 |
734 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1562661921 CA361330814 |
734 | G>R | No |
ClinGen Ensembl |
|
|
CA3452247 rs782244596 |
735 | K>* | No |
ClinGen ExAC gnomAD |
|
|
CA361330837 rs1230939402 |
735 | K>R | No |
ClinGen TOPMed |
|
|
rs1554165416 CA361330857 |
736 | P>A | No |
ClinGen gnomAD |
|
|
rs371295919 CA3452250 |
737 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128379454 rs908582761 |
738 | L>M | No |
ClinGen Ensembl |
|
|
CA361330940 rs782385310 |
739 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA3452254 rs782385310 |
739 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs546803828 CA3452253 |
739 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361330997 rs1554165430 |
741 | S>A | No |
ClinGen gnomAD |
|
|
CA3452255 rs781982422 |
741 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361331043 rs782093100 |
742 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA3452256 rs782093100 |
742 | R>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1567424 rs374687707 COSM3776293 CA361331045 |
742 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3452257 rs374687707 |
742 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1414219251 CA361331086 |
743 | A>E | No |
ClinGen TOPMed |
|
|
rs939986849 CA128379468 |
743 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361331114 rs1554165439 |
744 | V>G | No |
ClinGen gnomAD |
|
|
rs367685277 CA128379471 |
745 | G>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs782701070 CA128379474 |
747 | W>* | No |
ClinGen Ensembl |
|
|
rs533115257 CA128379477 |
747 | W>* | No |
ClinGen 1000Genomes |
|
|
CA3452258 rs371820170 |
748 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361331249 rs782168219 |
749 | Y>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 750 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3452262 rs201435940 |
752 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554165481 CA361331429 |
753 | R>T | No |
ClinGen gnomAD |
|
|
rs782743533 CA3452263 |
754 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA3452265 rs113722940 |
754 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs113722940 CA3452264 |
754 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361331453 rs1330737642 |
755 | Q>P | No |
ClinGen TOPMed |
|
| TCGA novel | 756 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554165505 CA361331514 |
757 | V>G | No |
ClinGen gnomAD |
|
|
rs1554165497 CA361331504 |
757 | V>L | No |
ClinGen gnomAD |
|
|
rs1582036090 CA361331520 |
758 | C>G | No |
ClinGen Ensembl |
|
| TCGA novel | 758 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782564746 CA3452267 |
759 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200820570 CA3452269 |
760 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781900960 CA3452268 |
760 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA361331604 rs1436945902 |
761 | E>G | No |
ClinGen TOPMed |
|
|
CA361331620 rs372339362 |
762 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3452271 rs372339362 |
762 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3452272 rs782354799 |
764 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782179742 CA3452274 |
764 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA3452273 rs782354799 |
764 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs880003672 CA361331658 |
765 | K>E | No |
ClinGen Ensembl |
|
|
rs1391072786 CA361331673 |
765 | K>N | No |
ClinGen TOPMed |
|
|
COSM3429002 rs146613275 COSM3429003 CA361331680 |
766 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs146613275 CA3452275 |
766 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361331727 rs1554165555 |
768 | L>F | No |
ClinGen gnomAD |
|
|
rs1406444669 CA361331731 |
768 | L>P | No |
ClinGen TOPMed |
|
|
rs1053262394 CA128379512 |
769 | M>L | No |
ClinGen Ensembl |
|
|
CA128379515 rs891491030 |
770 | A>V | No |
ClinGen Ensembl |
|
|
CA361331818 rs1554165566 |
772 | S>R | No |
ClinGen gnomAD |
|
|
rs1193380487 CA361331826 |
773 | P>A | No |
ClinGen TOPMed |
|
|
CA3452276 rs782021225 |
774 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361331861 rs1554165586 |
775 | L>F | No |
ClinGen gnomAD |
|
|
rs782140666 CA3452277 |
775 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA361331941 rs1246532449 |
779 | L>V | No |
ClinGen TOPMed |
|
|
CA361331998 rs1554165605 |
781 | K>N | No |
ClinGen gnomAD |
|
|
rs782085925 CA3452280 |
781 | K>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 781 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3452281 rs782722272 |
782 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781785142 CA361332026 |
783 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781785142 CA3452282 |
783 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361332053 rs1554165628 |
784 | E>K | No |
ClinGen Ensembl |
|
|
CA361332090 rs1562665046 |
785 | G>E | No |
ClinGen Ensembl |
|
|
CA361332083 rs782153529 CA3452284 |
785 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782153529 CA3452283 |
785 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781872546 CA3452286 |
786 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782500075 CA3452287 |
788 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs781821721 CA3452289 |
789 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 795 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361332328 rs1554165674 |
795 | P>L | No |
ClinGen gnomAD |
|
|
rs1554165680 CA361332347 |
796 | G>E | No |
ClinGen gnomAD |
|
|
CA361332341 CA3452292 COSM1165504 rs782277615 |
796 | G>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs782396000 CA3452293 |
797 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA361332371 rs968230550 |
797 | Q>P | No |
ClinGen TOPMed |
|
|
rs968230550 CA128379552 |
797 | Q>R | No |
ClinGen TOPMed |
|
|
rs782073950 CA3454452 |
798 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA361259520 rs1490306705 |
798 | P>S | No |
ClinGen TOPMed |
|
|
rs374951627 CA3454453 |
799 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781913955 CA3454454 |
799 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA3454455 rs781913955 |
799 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782109224 CA3454458 |
804 | D>H | No |
ClinGen ExAC |
|
|
COSM3696815 COSM3696819 COSM3696826 COSM3696817 CA3454459 COSM3696814 COSM3696822 COSM3696816 COSM3696828 COSM3696812 COSM3696820 rs782774245 COSM3696813 COSM3696823 COSM3696825 COSM3696821 COSM3696827 COSM3696818 COSM3696824 |
805 | W>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361259640 rs782774245 |
805 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA3454460 rs141879545 |
806 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454463 rs781815387 |
809 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138901709 CA3454464 |
810 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782686641 CA3454465 |
811 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1363421000 CA361259736 |
812 | R>I | No |
ClinGen TOPMed |
|
|
rs1586790986 CA361259751 |
813 | A>G | No |
ClinGen Ensembl |
|
|
CA3454466 rs782253140 |
814 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454467 rs782336746 |
815 | M>V | No |
ClinGen ExAC |
|
|
CA361259787 rs1554240128 |
816 | H>N | No |
ClinGen gnomAD |
|
|
rs149397164 CA3454468 |
817 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782426631 CA3454484 |
818 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782587733 CA3454485 |
818 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs782426631 CA361260538 |
818 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1181664726 CA361260559 |
819 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361260577 rs1554244276 |
820 | H>P | No |
ClinGen gnomAD |
|
|
COSM1062442 COSM1062448 COSM1062450 rs782273708 COSM1062445 COSM1062454 COSM1062455 COSM1062443 COSM1062452 COSM1062456 COSM1062457 COSM1062451 COSM1062453 COSM1062449 COSM1062447 CA3454486 COSM1062444 |
820 | H>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3454488 rs782634646 |
822 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454487 rs782419098 |
822 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs147537783 CA3454489 |
823 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs981642614 CA128362369 |
824 | A>T | No |
ClinGen Ensembl |
|
|
rs782347331 CA3454490 |
825 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260711 rs1468199443 |
826 | I>V | No |
ClinGen TOPMed |
|
|
rs555523473 CA3454493 |
828 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139355257 CA3454492 |
828 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782025005 CA3454494 |
830 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260802 rs1278779763 |
831 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3454495 rs201991205 |
833 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454497 rs201572428 |
835 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3454496 rs782766562 |
835 | D>V | No |
ClinGen ExAC |
|
|
rs1554244431 CA361260933 |
837 | Q>R | No |
ClinGen gnomAD |
|
|
CA3454498 rs782094765 |
838 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454499 RCV000950135 rs79247475 |
839 | P>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA128362405 rs369053351 |
839 | P>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1554244455 CA361260996 |
840 | T>A | No |
ClinGen gnomAD |
|
|
CA3454501 rs782544627 |
841 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454502 rs577838197 |
843 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454504 rs781852534 |
843 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs781852534 CA3454503 |
843 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs782605920 CA3454505 |
843 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs199851685 CA3454506 |
845 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454507 rs782437404 |
846 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs560422677 CA3454508 |
846 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs560422677 CA3454509 |
846 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361261129 rs782437404 |
846 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782179145 CA3454531 |
847 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454532 rs782321757 |
850 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554262240 CA361268348 |
852 | E>G | No |
ClinGen gnomAD |
|
|
rs781996586 CA3454536 |
858 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1179266 rs782079089 COSM1179264 COSM1179272 COSM1179273 COSM1179269 COSM1179270 COSM1179277 COSM1179268 COSM1179263 COSM1179271 COSM1179278 COSM1179275 COSM1179276 COSM1179265 CA3454537 COSM1179267 COSM1179274 |
859 | A>V | lung prostate [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1588246273 CA361268557 |
861 | V>G | No |
ClinGen Ensembl |
|
|
CA3454540 rs782068657 |
861 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1563727066 CA361268679 |
865 | S>N | No |
ClinGen Ensembl |
|
|
COSM139598 COSM139601 COSM139604 COSM139606 COSM139609 COSM139603 COSM139600 COSM139611 COSM139608 rs1554262287 COSM139599 COSM139607 COSM139602 COSM139605 COSM139610 CA361268865 |
871 | G>E | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs900919931 CA128372514 |
871 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1554262289 CA361268920 |
873 | G>D | No |
ClinGen gnomAD |
|
|
CA3454542 rs575518914 |
875 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175529844 CA361268995 |
876 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3454543 rs782119637 |
878 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454546 rs552954748 |
879 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552954748 CA3454545 |
879 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs373683237 CA3454547 |
880 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1486746921 CA361269173 |
881 | G>S | No |
ClinGen TOPMed |
|
|
CA128372547 rs1057913 |
885 | D>A | No |
ClinGen Ensembl |
|
|
rs371269236 CA3454551 |
885 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454552 rs782334415 |
886 | K>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454553 rs782623559 |
889 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3454555 rs782328874 |
890 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454556 rs200822345 |
891 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454559 rs782009776 |
895 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142720081 CA361269729 |
895 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3454558 rs142720081 |
895 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782087059 CA3454560 |
896 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1289763016 CA361269834 |
898 | I>V | No |
ClinGen TOPMed |
|
|
rs760426957 CA3454562 |
899 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1166265 COSM1166271 COSM1166266 COSM1166268 COSM1166267 COSM1166273 COSM1166276 COSM1166277 COSM1166272 COSM1166264 COSM1166279 rs147351924 CA3454561 COSM1166275 COSM1166269 COSM1166278 COSM1166270 COSM1166274 |
899 | R>W | large_intestine haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA361269875 rs1554262408 |
900 | Q>K | No |
ClinGen gnomAD |
|
|
CA361269953 rs1554262420 |
902 | P>A | No |
ClinGen gnomAD |
|
|
CA361269962 rs1359138927 |
902 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1314860754 CA361269972 |
903 | T>A | No |
ClinGen TOPMed |
|
|
CA361270002 rs1554262437 |
904 | N>K | No |
ClinGen TOPMed |
|
|
CA3454564 rs148436868 |
905 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554262456 CA361270119 |
907 | I>T | No |
ClinGen gnomAD |
|
|
rs781853535 CA3454565 |
907 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529364872 CA128372646 |
908 | D>E | No |
ClinGen Ensembl |
|
|
CA3454567 rs142570778 |
908 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128372638 rs782057926 |
908 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3454568 rs781835321 |
909 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs782451974 CA3454569 |
912 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3454570 rs782578873 |
914 | T>I | No |
ClinGen ExAC |
|
|
rs782274123 CA3454571 |
915 | F>S | No |
ClinGen ExAC gnomAD |
|
|
COSM216699 COSM216705 CA3454573 COSM216710 rs782642898 COSM1158471 COSM216696 COSM216700 COSM216702 COSM216709 COSM216704 COSM216698 COSM216697 COSM216706 COSM216707 COSM216701 COSM216703 COSM216708 |
916 | G>S | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454574 rs782270689 |
918 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs782270689 CA361270554 |
918 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1259591783 CA361270565 |
919 | E>Q | No |
ClinGen TOPMed |
|
|
CA361270593 rs1554262487 |
920 | E>D | No |
ClinGen gnomAD |
|
|
CA3454575 rs782348993 |
921 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs781972089 CA3454577 |
922 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554262492 CA361270633 |
922 | K>R | No |
ClinGen gnomAD |
|
|
rs374660085 CA3454578 |
927 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361270828 rs1554262513 |
928 | K>R | No |
ClinGen gnomAD |
|
|
CA3454579 rs782413551 |
929 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782413551 CA361270853 |
929 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307653192 CA361270984 |
932 | K>N | No |
ClinGen TOPMed |
|
|
CA128372721 rs184181976 |
932 | K>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
rs1554262529 CA361271070 |
935 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782776948 CA3454583 |
937 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3454584 rs781954349 |
940 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361271296 rs1295693430 |
941 | N>D | No |
ClinGen TOPMed |
|
|
rs1554262551 CA361271322 |
941 | N>K | No |
ClinGen gnomAD |
|
|
CA361271306 rs1415929182 |
941 | N>S | No |
ClinGen TOPMed |
|
|
CA128372734 rs958247947 |
942 | S>G | No |
ClinGen Ensembl |
|
|
CA128372735 rs17855798 |
942 | S>N | No |
ClinGen Ensembl |
|
|
COSM1434122 COSM1434119 CA3454585 COSM1434134 COSM1434133 COSM1434130 COSM1434131 COSM1434125 COSM1434126 COSM1434124 COSM1434127 COSM1434129 COSM1434121 COSM1434120 COSM1434123 rs199928168 COSM1434128 COSM1434132 |
943 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA361271405 rs1301104421 |
944 | T>A | No |
ClinGen TOPMed |
|
|
CA361271440 rs1554262572 |
945 | D>E | No |
ClinGen gnomAD |
|
|
CA361271462 rs1463725058 |
946 | N>Y | No |
ClinGen TOPMed |
No associated diseases with Q9Y5I1
10 regional properties for Q9Y5I1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Cadherin-like | 28 - 133 | IPR002126-1 |
| domain | Cadherin-like | 142 - 242 | IPR002126-2 |
| domain | Cadherin-like | 242 - 349 | IPR002126-3 |
| domain | Cadherin-like | 350 - 564 | IPR002126-4 |
| domain | Cadherin-like | 580 - 677 | IPR002126-5 |
| domain | Cadherin, N-terminal | 30 - 111 | IPR013164 |
| conserved_site | Cadherin conserved site | 230 - 240 | IPR020894-1 |
| conserved_site | Cadherin conserved site | 442 - 452 | IPR020894-2 |
| conserved_site | Cadherin conserved site | 552 - 562 | IPR020894-3 |
| domain | Cadherin, C-terminal catenin-binding domain | 799 - 932 | IPR031904 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium ion binding | Binding to a calcium ion (Ca2+). |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cell adhesion | The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
| homophilic cell adhesion via plasma membrane adhesion molecules | The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell. |
| nervous system development | The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. |
46 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q3SWX5 | CDH6 | Cadherin-6 | Bos taurus (Bovine) | PR |
| P79995 | CDH10 | Cadherin-10 | Gallus gallus (Chicken) | PR |
| Q8UVJ7 | CDHR1 | Cadherin-related family member 1 | Gallus gallus (Chicken) | PR |
| Q5DRC8 | PCDHB6 | Protocadherin beta-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE4 | PCDHA8 | Protocadherin alpha-8 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE6 | PCDHA6 | Protocadherin alpha-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF0 | PCDHA2 | Protocadherin alpha-2 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE7 | PCDHA5 | Protocadherin alpha-5 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF3 | PCDHA11 | Protocadherin alpha-11 | Pan troglodytes (Chimpanzee) | PR |
| Q9VJB6 | CadN2 | Putative neural-cadherin 2 | Drosophila melanogaster (Fruit fly) | PR |
| Q9ULB4 | CDH9 | Cadherin-9 | Homo sapiens (Human) | PR |
| P12830 | CDH1 | Cadherin-1 | Homo sapiens (Human) | PR |
| Q9H159 | CDH19 | Cadherin-19 | Homo sapiens (Human) | PR |
| Q9Y6N8 | CDH10 | Cadherin-10 | Homo sapiens (Human) | PR |
| P55285 | CDH6 | Cadherin-6 | Homo sapiens (Human) | PR |
| P19022 | CDH2 | Cadherin-2 | Homo sapiens (Human) | PR |
| Q6ZTQ4 | CDHR3 | Cadherin-related family member 3 | Homo sapiens (Human) | PR |
| Q9BZA8 | PCDH11Y | Protocadherin-11 Y-linked | Homo sapiens (Human) | PR |
| Q08174 | PCDH1 | Protocadherin-1 | Homo sapiens (Human) | PR |
| Q9HC56 | PCDH9 | Protocadherin-9 | Homo sapiens (Human) | PR |
| Q9P2E7 | PCDH10 | Protocadherin-10 | Homo sapiens (Human) | PR |
| Q9Y5H8 | PCDHA3 | Protocadherin alpha-3 | Homo sapiens (Human) | PR |
| Q9UN75 | PCDHA12 | Protocadherin alpha-12 | Homo sapiens (Human) | PR |
| Q9Y5I2 | PCDHA10 | Protocadherin alpha-10 | Homo sapiens (Human) | PR |
| Q9UN72 | PCDHA7 | Protocadherin alpha-7 | Homo sapiens (Human) | PR |
| Q9UN74 | PCDHA4 | Protocadherin alpha-4 | Homo sapiens (Human) | PR |
| Q9Y5H7 | PCDHA5 | Protocadherin alpha-5 | Homo sapiens (Human) | PR |
| Q9UN73 | PCDHA6 | Protocadherin alpha-6 | Homo sapiens (Human) | PR |
| Q9Y5H6 | PCDHA8 | Protocadherin alpha-8 | Homo sapiens (Human) | PR |
| Q9Y5I3 | PCDHA1 | Protocadherin alpha-1 | Homo sapiens (Human) | PR |
| Q9Y5H9 | PCDHA2 | Protocadherin alpha-2 | Homo sapiens (Human) | PR |
| Q9Y5H3 | PCDHGA10 | Protocadherin gamma-A10 | Homo sapiens (Human) | PR |
| O60330 | PCDHGA12 | Protocadherin gamma-A12 | Homo sapiens (Human) | PR |
| Q9Y5G4 | PCDHGA9 | Protocadherin gamma-A9 | Homo sapiens (Human) | PR |
| Q9Y5G0 | PCDHGB5 | Protocadherin gamma-B5 | Homo sapiens (Human) | PR |
| Q9Y5E3 | PCDHB6 | Protocadherin beta-6 | Homo sapiens (Human) | PR |
| Q9Y5F1 | PCDHB12 | Protocadherin beta-12 | Homo sapiens (Human) | PR |
| P09803 | Cdh1 | Cadherin-1 | Mus musculus (Mouse) | PR |
| P15116 | Cdh2 | Cadherin-2 | Mus musculus (Mouse) | PR |
| P70407 | Cdh9 | Cadherin-9 | Mus musculus (Mouse) | PR |
| P97326 | Cdh6 | Cadherin-6 | Mus musculus (Mouse) | PR |
| P70408 | Cdh10 | Cadherin-10 | Mus musculus (Mouse) | PR |
| Q8VHF2 | Cdhr5 | Cadherin-related family member 5 | Mus musculus (Mouse) | PR |
| P55280 | Cdh6 | Cadherin-6 | Rattus norvegicus (Rat) | PR |
| Q9Z1Y3 | Cdh2 | Cadherin-2 | Rattus norvegicus (Rat) | PR |
| Q767I8 | Pcdha4 | Protocadherin alpha-4 | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MFGFQRRGLG | TPRLQLWLLL | LEFWEVGSGQ | LHYSVSEEAK | HGTFVGRIAQ | DLGLELAELV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| QRLFRVASKT | HGDLLEVNLQ | NGILFVNSRI | DREELCGQSA | ECSIHLEVIV | DRPLQVFHVN |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VEVKDINDNP | PVFSLREQKL | LIAESKQSDS | RFPLEGASDA | DIEENALLTY | RLSKNEYFSL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DSPTNGKQIK | RLSLILKKSL | DREKTPELNL | LLTATDGGKP | ELTGTVRLLV | QVLDVNDNDP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EFDKSEYKVS | LMENAAKETL | VLKLNATDRD | EGVNGEVTYS | LMSIKPNGRH | LFTLDQNNGE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| VRVNGTLDYE | ENKFYKIEVQ | ATDKGTPPMA | GHCTVWVEIL | DTNDNSPEVA | VTSLSLPVRE |
| 370 | 380 | 390 | 400 | 410 | 420 |
| DAQPSTVIAL | ISVSDRDSGV | NGQVTCSLTP | HVPFKLVSTF | KNYYSLVLDS | ALDRENVWAY |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ELVVTARDGG | SPSLWATARV | SVEVADVNDN | APAFAQPEYT | VFVKENNPPG | CHIFTVSARD |
| 490 | 500 | 510 | 520 | 530 | 540 |
| ADAQENALVS | YSLVERRLGD | RALSSYVSVH | AESGKVYALQ | PLDHEELELL | QFQVSARDAG |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VPPLSSNVTL | QVFVLDENDN | APALLATQAG | SAGGAVNKLV | PRSVGAGHVV | AKVRAVDADS |
| 610 | 620 | 630 | 640 | 650 | 660 |
| GYNAWLSYEL | QPAAGGSRIP | FRVGLYTGEI | STTRALDEAD | SPRHRLLVLV | KDHGEPALTA |
| 670 | 680 | 690 | 700 | 710 | 720 |
| TATVLVSLVE | SGQAPKASSR | TLAGAASPEA | ALVDVNVYLI | IAICVVSSLL | VLTLLLYTAL |
| 730 | 740 | 750 | 760 | 770 | 780 |
| WWSATPTEGA | CAPGKPTLVC | SRAVGSWSYS | QQRRQRVCSE | EGPPKTDLMA | FSPSLPLGLN |
| 790 | 800 | 810 | 820 | 830 | 840 |
| KEEEGERQEP | GSNHPGQPRQ | PNPDWRYSAS | LRAGMHSSVH | LEEAGILRAG | PGGPDQQWPT |
| 850 | 860 | 870 | 880 | 890 | 900 |
| VSSATPEPEA | GEVSPPVGAG | VNSNSWTFKY | GPGNPKQSGP | GELPDKFIIP | GSPAIISIRQ |
| 910 | 920 | 930 | 940 | ||
| EPTNSQIDKS | DFITFGKKEE | TKKKKKKKKG | NKTQEKKEKG | NSTTDNSDQ |