Q9UN74
Gene name |
PCDHA4 |
Protein name |
Protocadherin alpha-4 |
Names |
PCDH-alpha-4 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:56144 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9UN74
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9UN74-F1 | Predicted | AlphaFoldDB |
977 variants for Q9UN74
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000508600 CA3454461 rs150254638 |
804 | R>H | Hirschsprung disease, susceptibility to, 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
| rs1193581324 | 1 | M>? | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1361457151 CA361281985 |
2 | E>A | No |
ClinGen TOPMed |
|
|
CA3446818 rs782121234 |
4 | S>P | No |
ClinGen ExAC |
|
|
rs1562206612 CA361282118 |
6 | G>R | No |
ClinGen Ensembl |
|
|
CA3446820 rs782751422 |
7 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA128375453 rs782421232 |
8 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782421232 CA3446821 |
8 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3446822 COSM3428969 rs147378308 |
10 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1554123800 CA361282279 |
11 | S>Y | No |
ClinGen gnomAD |
|
|
CA361282316 rs1562206749 |
13 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs782807464 CA3446824 |
16 | L>R | No |
ClinGen ExAC |
|
|
CA3446825 rs781879266 |
17 | L>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361282451 rs781879266 |
17 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446827 rs782505608 |
18 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782505608 CA361282501 |
18 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361282594 rs1554123817 |
20 | L>R | No |
ClinGen gnomAD |
|
|
rs782639557 CA3446829 |
21 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782583105 COSM420382 CA3446832 |
22 | A>T | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1367583489 CA361282699 |
23 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs138132729 CA3446833 |
24 | W>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446834 rs782426458 |
25 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 26 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782375351 CA3446837 |
29 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs781978494 CA3446838 |
30 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA3446839 rs782310722 |
31 | L>P | No |
ClinGen TOPMed |
|
|
rs782331571 CA3446842 |
33 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs782029376 CA3446843 |
34 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs1470270680 CA361283176 |
35 | V>G | No |
ClinGen TOPMed |
|
|
rs782145999 CA3446845 |
36 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782145999 CA3446844 |
36 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446846 rs528454810 |
37 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554123853 CA361283270 |
38 | E>D | No |
ClinGen gnomAD |
|
|
rs983753227 CA128375481 |
39 | A>D | No |
ClinGen Ensembl |
|
|
CA3446847 rs189135254 |
39 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3446848 rs782721399 |
40 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1554123871 CA361283343 |
41 | H>P | No |
ClinGen gnomAD |
|
|
rs1554123873 CA361283348 |
41 | H>Q | No |
ClinGen gnomAD |
|
|
rs1554123867 CA361283328 |
41 | H>Y | No |
ClinGen gnomAD |
|
|
CA3446850 rs781800843 |
42 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA3446849 rs781800843 |
42 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA3446851 rs782815519 |
43 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782522800 CA3446853 |
47 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA128375486 rs199939862 |
47 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA361283569 rs1286013089 |
49 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs782649273 CA3446855 |
49 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1061910 CA3446854 rs782649273 |
49 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA361283603 rs1554123887 |
50 | Q>P | No |
ClinGen gnomAD |
|
|
rs1554123890 CA361283618 |
51 | D>N | No |
ClinGen gnomAD |
|
|
VAR_059180 CA3446860 rs11167605 |
55 | E>D | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1279167584 CA361283739 |
55 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1279167584 CA361283740 |
55 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs918123295 CA128375490 |
56 | L>P | No |
ClinGen TOPMed |
|
|
CA128375492 rs949440782 |
57 | A>E | No |
ClinGen Ensembl |
|
|
CA361283789 rs1303898166 |
57 | A>S | No |
ClinGen TOPMed |
|
|
CA361283880 rs1554123903 |
59 | L>P | No |
ClinGen TOPMed |
|
|
CA3446861 rs145024223 |
59 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446863 rs782357546 |
61 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs782241518 CA3446862 |
61 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA361283968 rs1554123909 |
62 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782704946 CA3446866 |
64 | F>L | No |
ClinGen ExAC |
|
|
CA3446868 rs148298330 |
65 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446867 rs148298330 |
65 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446869 rs782782841 |
66 | V>M | No |
ClinGen ExAC |
|
|
CA3446872 rs782494406 |
67 | A>E | No |
ClinGen ExAC |
|
|
CA3446871 rs782494406 |
67 | A>G | No |
ClinGen ExAC |
|
|
CA3446870 rs781857589 |
67 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3446873 rs781811191 |
68 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs781811191 CA3446874 |
68 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs782668937 CA3446876 |
68 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3446885 CA3446884 rs3822355 |
69 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs3822354 CA3446888 |
70 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3446892 rs782005139 |
70 | G>D | No |
ClinGen ExAC |
|
|
rs3822354 CA3446889 |
70 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1562208248 CA917595094 |
70 | G>RHRD | No |
ClinGen Ensembl |
|
|
rs3822354 CA3446886 |
70 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs3822352 CA3446901 |
71 | R>H | No |
ClinGen ExAC TOPMed |
|
|
rs782120489 CA3446899 |
71 | R>S | No |
ClinGen ExAC |
|
|
rs1554123969 CA361284328 |
72 | G>E | No |
ClinGen gnomAD |
|
|
COSM736316 rs3822351 CA3446907 |
72 | G>R | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1554123969 CA3446908 |
72 | G>V | No |
ClinGen gnomAD |
|
|
CA3446914 rs17844273 |
73 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128375531 rs201303975 |
73 | G>S | No |
ClinGen Ensembl |
|
|
CA361284398 rs1554123978 |
74 | L>F | No |
ClinGen gnomAD |
|
|
rs781879496 CA3446919 |
75 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA361284474 rs1554124003 |
76 | E>V | No |
ClinGen gnomAD |
|
|
CA3446920 rs782121497 |
77 | V>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 77 | V>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1226782734 CA361284522 |
78 | N>H | No |
ClinGen TOPMed |
|
|
rs782749843 CA361284547 |
79 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA361284644 rs1554124008 |
82 | G>C | No |
ClinGen gnomAD |
|
|
COSM1061912 CA361284650 rs1554124011 |
82 | G>D | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA361284654 rs1554124011 |
82 | G>V | No |
ClinGen gnomAD |
|
|
rs1325948776 CA361284706 |
85 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3446922 rs781837563 |
86 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361284802 rs1554124019 |
88 | S>Y | No |
ClinGen gnomAD |
|
|
CA361284825 rs1223020779 |
89 | R>L | No |
ClinGen TOPMed |
|
|
CA361284812 rs1562209141 |
89 | R>W | No |
ClinGen Ensembl |
|
| TCGA novel | 91 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361284881 rs1554124027 |
91 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 91 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3446924 rs782581382 |
93 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs546275072 CA3446925 |
94 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361285033 rs1554124044 |
96 | C>* | No |
ClinGen gnomAD |
|
|
rs1554124037 CA361285011 |
96 | C>S | No |
ClinGen gnomAD |
|
|
CA361285019 rs1554124040 |
96 | C>Y | No |
ClinGen gnomAD |
|
|
rs3822348 CA3446927 |
97 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs111900306 CA3446928 |
97 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs111900306 CA128375545 |
97 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446929 rs528503686 |
98 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs371525794 CA3446930 |
99 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782221460 COSM373843 CA3446932 |
99 | S>R | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed |
|
rs371525794 CA361285099 |
99 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1581685222 CA361285120 COSM1061914 |
100 | A>T | endometrium [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs782333816 CA3446933 |
100 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA128375550 rs1053803675 |
101 | E>K | No |
ClinGen Ensembl |
|
|
rs1581685310 CA361285180 |
102 | C>G | No |
ClinGen Ensembl |
|
|
CA3446934 rs370847724 |
103 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361285312 rs1581685370 |
106 | L>V | No |
ClinGen Ensembl |
|
| TCGA novel | 107 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361285324 rs1581685398 |
107 | E>K | No |
ClinGen Ensembl |
|
|
rs1554124059 CA361285371 |
108 | V>L | No |
ClinGen gnomAD |
|
|
rs782377477 CA3446936 |
110 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361285413 rs1554124060 |
110 | V>I | No |
ClinGen gnomAD |
|
|
CA3446938 rs782091040 |
111 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361285483 rs1554124063 |
112 | R>K | No |
ClinGen gnomAD |
|
|
rs1187036014 CA361285516 |
112 | R>S | No |
ClinGen TOPMed |
|
|
rs367896801 CA3446941 |
113 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446940 rs367896801 |
113 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 113 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3446942 rs782811341 |
116 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782811341 CA361285658 |
116 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361285704 rs1462796300 |
118 | H>Y | No |
ClinGen TOPMed |
|
|
CA3446944 rs782531959 |
120 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446945 rs782626216 |
121 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA361285820 rs1554124073 |
121 | V>M | No |
ClinGen gnomAD |
|
|
CA361285872 rs1310483262 |
122 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA361285853 rs1209745292 |
122 | E>Q | No |
ClinGen TOPMed |
|
|
CA361285896 rs1554124077 |
123 | V>A | No |
ClinGen gnomAD |
|
|
CA361285903 rs1554124077 |
123 | V>G | No |
ClinGen gnomAD |
|
|
rs561978404 CA3446946 |
124 | R>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs150847383 CA3446947 |
124 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361285954 rs1554124081 |
125 | D>N | No |
ClinGen gnomAD |
|
|
CA128375560 rs200997832 |
126 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
rs782590169 CA3446948 |
127 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1562210104 CA361286049 |
128 | D>G | No |
ClinGen Ensembl |
|
|
rs952470653 CA128375562 |
128 | D>H | No |
ClinGen gnomAD |
|
|
CA361286083 rs371480931 |
129 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446950 rs782430238 |
129 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA361286128 rs1355762346 |
131 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1355762346 CA361286124 |
131 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA361286127 rs1355762346 |
131 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs138189439 CA3446955 CA3446954 |
132 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs76522243 CA3446956 |
133 | F>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446958 rs782149681 |
133 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs76522243 CA3446957 |
133 | F>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446959 rs146575746 |
134 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446960 rs146575746 |
134 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1482430512 CA361286209 |
135 | A>V | No |
ClinGen TOPMed |
|
|
rs141030691 CA3446962 |
136 | T>I | No |
ClinGen ESP ExAC gnomAD |
|
|
rs141030691 CA361286260 |
136 | T>R | No |
ClinGen ESP ExAC gnomAD |
|
|
CA361286250 rs1554124116 |
136 | T>S | No |
ClinGen gnomAD |
|
|
CA361286274 rs1342022968 |
137 | Q>* | No |
ClinGen TOPMed |
|
|
CA3446964 rs144914662 |
137 | Q>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446963 rs144914662 |
137 | Q>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs144914662 CA3446965 |
137 | Q>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1375080438 CA361288382 COSM1433777 |
138 | K>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA361288388 rs1554124134 |
139 | N>D | No |
ClinGen gnomAD |
|
|
CA361288403 rs1554124143 |
140 | L>Q | No |
ClinGen gnomAD |
|
|
CA361288410 rs782498556 |
141 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs554905188 CA3446969 |
141 | S>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs554905188 CA3446968 |
141 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3446967 rs782498556 |
141 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 141 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361288407 rs782498556 |
141 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446970 rs782442126 |
142 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA3446971 rs782576297 |
142 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361288418 rs782442126 |
142 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs781997820 CA3446975 COSM589680 |
143 | A>E | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs782288256 CA3446973 |
143 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs782288256 CA3446972 |
143 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs781997820 CA3446974 |
143 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1177804428 CA361288449 |
144 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1177804428 CA361288455 |
144 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs781954870 CA3446977 |
145 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128376109 rs1042588198 |
146 | R>G | No |
ClinGen Ensembl |
|
|
rs148605499 CA3446979 |
149 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1360812183 CA361288572 |
151 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361288565 rs1554124171 |
151 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361288619 rs1554124177 |
155 | E>G | No |
ClinGen gnomAD |
|
|
CA361288613 rs1265160287 |
155 | E>Q | No |
ClinGen TOPMed |
|
|
CA361288638 rs1243114134 |
156 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA361288653 rs1554124181 |
157 | A>D | No |
ClinGen gnomAD |
|
|
CA3446981 rs782156904 |
157 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1307238729 CA361288674 |
158 | S>L | No |
ClinGen TOPMed |
|
|
CA3446985 COSM1696256 rs782724169 |
159 | D>N | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs782656312 CA3446988 |
161 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128376124 rs557317357 |
161 | D>E | No |
ClinGen 1000Genomes gnomAD |
|
|
CA3446987 rs782562100 |
161 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA3446989 rs151175650 |
162 | I>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA3446992 CA128376131 rs782061737 |
163 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782061737 CA3446991 |
163 | G>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782620777 CA3446993 |
164 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128376138 rs575783501 |
165 | N>D | No |
ClinGen 1000Genomes |
|
|
rs782331104 CA3446995 |
165 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs782583674 CA3446997 |
166 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782583674 CA3446996 |
166 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1364213662 COSM205053 CA361288806 |
166 | A>T | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA3446999 rs782423945 |
167 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446998 rs782423945 |
167 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447000 rs782423945 |
167 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782338202 CA3447001 |
168 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs781931129 CA3447002 |
169 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1490645074 CA361288857 |
169 | T>I | No |
ClinGen TOPMed |
|
|
CA361288887 rs1267301172 |
171 | R>K | No |
ClinGen TOPMed |
|
|
rs1554124214 CA361288931 |
173 | S>R | No |
ClinGen Ensembl |
|
| TCGA novel | 174 | P>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1562211808 CA361288944 |
174 | P>S | No |
ClinGen Ensembl |
|
|
rs782047750 CA3447004 |
175 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447005 rs782799049 |
176 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs781885240 CA3447006 |
177 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447007 rs782125773 |
178 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs369564705 CA3447008 |
179 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369564705 CA3447009 COSM448737 |
179 | S>F | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA128376181 rs533049370 |
180 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1554124228 CA361289072 |
181 | E>A | No |
ClinGen gnomAD |
|
|
rs781794809 CA3447012 |
183 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3447013 rs3822346 VAR_024390 |
184 | P>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1554124240 CA361289177 |
185 | D>E | No |
ClinGen gnomAD |
|
|
CA361289183 rs1383891964 |
186 | D>N | No |
ClinGen TOPMed |
|
|
CA3447015 rs782266398 |
187 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA3447017 rs782346248 |
188 | L>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 189 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1319661297 CA361289329 |
190 | K>N | No |
ClinGen TOPMed |
|
| TCGA novel | 191 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 193 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs529738408 CA3447019 |
194 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs782033818 CA3447020 |
195 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA361289440 rs1178619077 |
197 | R>W | No |
ClinGen TOPMed |
|
|
CA361289464 rs1562212438 |
198 | K>E | No |
ClinGen Ensembl |
|
|
rs782393420 CA3447022 |
199 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782393420 CA3447023 |
199 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361289526 rs1554124270 |
200 | L>S | No |
ClinGen Ensembl |
|
|
CA3447024 rs369163231 |
201 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554124276 CA361289588 |
202 | R>K | No |
ClinGen gnomAD |
|
|
CA3447025 rs782723382 |
203 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554124277 CA361289601 |
203 | E>K | No |
ClinGen gnomAD |
|
|
rs573341314 CA3447026 |
204 | E>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782056776 CA361289645 |
205 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361289648 rs782056776 |
205 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782056776 CA3447027 |
205 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370687848 CA3447028 |
206 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361289654 rs1554124282 |
206 | P>S | No |
ClinGen gnomAD |
|
|
CA361289679 rs1262793743 |
207 | E>A | No |
ClinGen TOPMed |
|
|
rs992908265 CA128376224 |
207 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA361289670 rs1554124286 |
207 | E>K | No |
ClinGen gnomAD |
|
|
rs781897114 CA3447030 |
208 | I>V | No |
ClinGen ExAC TOPMed |
|
|
CA3447031 rs372699466 CA3447032 |
210 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| rs782733777 | 210 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3447033 rs781816070 |
212 | L>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs562041682 CA128376233 |
213 | T>I | No |
ClinGen 1000Genomes |
|
|
CA3447034 rs782460121 |
214 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA361289835 rs1554124299 |
215 | T>S | No |
ClinGen gnomAD |
|
|
rs1272639969 CA361289859 |
216 | D>G | No |
ClinGen TOPMed |
|
|
rs782293476 CA3447036 |
217 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA3447037 rs782535026 |
219 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782647653 CA3447038 |
220 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447040 rs782354184 |
221 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA128376250 rs924127496 |
223 | T>P | No |
ClinGen Ensembl |
|
|
rs782193088 CA3447042 |
224 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447044 rs529221273 |
226 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs529221273 CA3447043 |
226 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782155979 CA3447045 |
227 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA3447046 rs782786124 |
227 | Q>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361290038 rs782786124 |
227 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781990148 CA3447047 |
230 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs781990148 CA361290082 |
230 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA3447049 rs782074587 |
233 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA3447050 rs782700290 |
234 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 234 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3447052 rs141163311 |
236 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781785947 CA3447051 |
236 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1391356364 CA361290196 |
238 | N>H | No |
ClinGen TOPMed |
|
|
rs782791250 CA3447053 |
239 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs901067818 CA128376270 |
241 | A>G | No |
ClinGen Ensembl |
|
|
CA361290242 rs781869651 |
241 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447054 rs781869651 |
241 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447055 rs544486989 |
242 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361290297 rs1554124343 |
244 | R>I | No |
ClinGen gnomAD |
|
|
rs1245397116 CA361290329 |
246 | I>S | No |
ClinGen TOPMed |
|
|
CA3447056 rs782616860 |
246 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA128376277 rs929919942 |
247 | Y>D | No |
ClinGen Ensembl |
|
|
rs782209478 CA3447057 |
249 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782467097 CA3447058 |
250 | R>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 254 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA128376280 rs1046867611 |
254 | N>I | No |
ClinGen gnomAD |
|
|
COSM1261267 rs1046867611 CA361290460 |
254 | N>S | oesophagus [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA3447059 rs201004244 |
255 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554124359 CA361290504 |
257 | N>H | No |
ClinGen gnomAD |
|
|
rs1554124363 CA361290510 |
257 | N>S | No |
ClinGen gnomAD |
|
|
rs782007660 CA3447062 |
258 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs782778842 CA128376290 |
260 | L>S | No |
ClinGen Ensembl |
|
|
rs782254119 CA3447063 |
261 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs533157814 CA3447064 |
263 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361290607 rs1554124372 |
264 | L>P | No |
ClinGen gnomAD |
|
|
rs1226145828 CA361290632 |
265 | N>K | No |
ClinGen TOPMed |
|
|
rs782039700 CA3447066 |
266 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs782039700 COSM1219581 CA3447067 |
266 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361290706 rs1562213724 |
270 | D>E | No |
ClinGen Ensembl |
|
|
rs782760377 CA3447070 |
271 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs1554124378 CA361290722 |
271 | E>G | No |
ClinGen gnomAD |
|
|
rs1554124378 CA361290719 |
271 | E>V | No |
ClinGen gnomAD |
|
|
CA361290729 rs1361329408 |
272 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs782472547 CA3447072 |
274 | N>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 276 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361290787 rs1554124383 |
276 | D>N | No |
ClinGen Ensembl |
|
| TCGA novel | 276 | D>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA128376311 rs1034066064 |
279 | Y>C | No |
ClinGen gnomAD |
|
|
CA128376312 rs894226216 |
281 | F>S | No |
ClinGen Ensembl |
|
|
CA3447073 COSM1061930 rs782714684 |
282 | S>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed |
|
CA361290885 COSM448741 rs782714684 |
282 | S>L | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed |
|
rs1562213945 CA361290890 |
283 | N>D | No |
ClinGen Ensembl |
|
|
rs1340097286 CA361290910 |
284 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs781791401 CA3447074 COSM1433779 |
286 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1393234929 CA361291023 |
290 | K>I | No |
ClinGen TOPMed gnomAD |
|
|
CA361291067 rs1554124407 |
293 | F>L | No |
ClinGen gnomAD |
|
|
rs1554124409 CA361291081 |
293 | F>L | No |
ClinGen gnomAD |
|
|
CA361291070 rs1554124407 |
293 | F>V | No |
ClinGen gnomAD |
|
| TCGA novel | 294 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3447078 rs377697994 |
296 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 296 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 297 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1562214124 CA361291143 |
297 | P>S | No |
ClinGen Ensembl |
|
|
CA361291162 rs782221936 |
298 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA3447079 rs59233330 |
298 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1581690509 CA361291167 |
299 | T>A | No |
ClinGen Ensembl |
|
|
CA3447083 rs782294172 |
302 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782373131 CA3447084 |
303 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA3447085 rs782004795 |
304 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs148933348 CA361291274 |
305 | K>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs145409201 CA3447087 |
307 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361291311 rs145409201 |
307 | Y>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs781921257 CA3447088 |
308 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447089 rs782066312 |
309 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782793067 CA3447090 |
310 | F>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 312 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361291425 rs1554124422 |
313 | S>N | No |
ClinGen gnomAD |
|
|
rs1554124423 CA361291443 |
314 | K>I | No |
ClinGen gnomAD |
|
|
CA361291479 rs1202926318 |
316 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
CA128376340 rs17844278 |
316 | Y>C | No |
ClinGen TOPMed |
|
|
CA3447093 rs782108978 |
316 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA361291473 rs17844278 |
316 | Y>S | No |
ClinGen TOPMed |
|
| TCGA novel | 317 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361291483 rs868911123 |
317 | E>K | No |
ClinGen Ensembl |
|
|
rs782764384 CA3447094 |
318 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs782479156 CA361291545 |
321 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782479156 CA3447096 |
321 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1292142612 CA361291577 |
323 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA361291619 rs1554124432 |
325 | K>T | No |
ClinGen gnomAD |
|
|
CA361291641 rs1282618678 |
326 | G>A | No |
ClinGen TOPMed |
|
|
rs1355843543 CA361291636 |
326 | G>R | No |
ClinGen TOPMed |
|
|
CA361291646 rs1554124439 |
327 | Q>* | No |
ClinGen gnomAD |
|
|
CA361291699 rs868976619 |
330 | L>F | No |
ClinGen Ensembl |
|
|
CA3447099 rs782558494 |
330 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA3447100 rs782647325 |
331 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs782610577 CA3447103 |
335 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs782183352 CA3447104 |
337 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1554124450 CA361291844 |
339 | E>A | No |
ClinGen gnomAD |
|
|
rs1307561739 CA361291917 |
343 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs782019485 CA3447107 CA361291946 |
344 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs566917401 CA3447108 COSM1061934 |
345 | D>G | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed |
|
CA361291951 COSM1671930 rs868947123 |
345 | D>N | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA361291977 rs1554124464 |
346 | N>S | No |
ClinGen gnomAD |
|
|
rs781997351 CA3447110 |
347 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1554124466 CA361292020 |
349 | D>H | No |
ClinGen gnomAD |
|
|
rs1554124466 CA361292022 |
349 | D>Y | No |
ClinGen gnomAD |
|
|
CA3447112 rs782073984 |
350 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA361292135 rs1554124470 |
355 | L>S | No |
ClinGen Ensembl |
|
|
rs1412132205 CA361292183 |
358 | P>L | No |
ClinGen TOPMed |
|
|
CA3447116 rs782815888 |
359 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs557642190 CA3447115 |
359 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3447119 rs569401882 |
361 | E>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3447121 rs781840422 |
363 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA3447122 rs782433046 |
363 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447124 rs138396244 |
366 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3447125 rs138396244 |
366 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361292305 rs367717209 |
366 | G>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA128376403 rs367717209 |
366 | G>S | No |
ClinGen ESP TOPMed gnomAD |
|
| TCGA novel | 368 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA128376416 rs942791264 |
369 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA361292366 rs1286163937 COSM736312 |
370 | A>S | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA3447127 rs782259868 |
372 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs782336917 CA3447128 |
376 | D>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 378 | D>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1226675581 CA361292505 |
379 | M>V | No |
ClinGen TOPMed |
|
|
CA361292526 rs1347522156 |
380 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA3447129 rs781960345 |
381 | V>D | No |
ClinGen ExAC gnomAD |
|
|
CA3447130 rs782169287 |
382 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361292582 rs1554124486 |
383 | G>A | No |
ClinGen gnomAD |
|
|
CA3447133 rs782123040 |
385 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs1554124492 COSM1197720 CA361292694 |
390 | T>M | lung large_intestine urinary_tract [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1554124493 CA361292704 |
391 | S>F | No |
ClinGen gnomAD |
|
|
rs1562215791 CA361292724 |
392 | H>Q | No |
ClinGen Ensembl |
|
|
CA3447134 rs76650315 |
393 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA128376422 rs76650315 |
393 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA361292732 rs76650315 |
393 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1156251617 CA361292760 |
395 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3447135 rs781953754 |
395 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA361292770 rs1481118058 |
396 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA3447136 rs782097459 |
396 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA361292783 rs1425307568 |
398 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs782708840 CA3447137 |
399 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA3447138 rs534285783 |
400 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1554124507 CA361292795 |
400 | T>I | No |
ClinGen gnomAD |
|
|
rs534285783 CA3447139 |
400 | T>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1554124511 CA361292799 |
401 | F>Y | No |
ClinGen gnomAD |
|
|
rs782801164 CA3447140 |
402 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs781853303 CA3447141 |
404 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs781853303 CA3447142 |
404 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
rs555840522 CA3447144 |
405 | Y>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs143891810 CA3447146 |
406 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361292833 rs1190545218 |
406 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA361292844 rs1554124521 |
408 | V>M | No |
ClinGen gnomAD |
|
|
rs1554124523 CA361292854 |
409 | L>Q | No |
ClinGen gnomAD |
|
|
rs1209126629 CA361292861 |
410 | D>G | No |
ClinGen TOPMed |
|
|
rs782218183 CA3447150 |
411 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA3447153 rs147309851 |
412 | A>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361292894 rs1554124528 |
412 | A>S | No |
ClinGen gnomAD |
|
|
CA3447152 rs147309851 |
412 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782400993 CA3447154 |
415 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs782400993 CA361292940 |
415 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554124539 CA361292943 |
415 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA128376435 rs781860086 |
417 | S>I | No |
ClinGen gnomAD |
|
|
rs7702779 CA3447158 |
417 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM249070 rs372913069 CA128376438 |
418 | V>M | pancreas [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA3447160 rs782693036 |
420 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361293020 rs1219099901 |
420 | A>S | No |
ClinGen TOPMed |
|
|
CA361293026 rs782693036 |
420 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554124549 CA361293030 |
421 | Y>H | No |
ClinGen gnomAD |
|
|
COSM1161515 rs781801609 CA3447161 |
422 | E>K | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
| TCGA novel | 424 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361293079 rs1554124562 |
424 | V>M | No |
ClinGen gnomAD |
|
|
CA3447166 rs368557415 |
426 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM736308 CA3447168 rs559892183 |
428 | R>* | lung haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA361293165 rs1554124581 |
430 | G>E | No |
ClinGen gnomAD |
|
|
CA361293163 CA361293158 rs1359220357 |
430 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen TOPMed gnomAD NCI-TCGA |
|
rs782290463 CA3447172 |
431 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA3447171 rs782669465 |
431 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA361293181 rs782290463 |
431 | G>V | No |
ClinGen ExAC gnomAD |
|
|
COSM166726 rs781996796 CA3447174 |
432 | S>L | Variant assessed as Somatic; 0.0 impact. liver haematopoietic_and_lymphoid_tissue [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs782357684 CA3447176 |
433 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782078802 CA3447175 |
433 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs372115820 CA3447177 COSM1433780 |
434 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA gnomAD |
|
rs375134546 CA3447181 |
436 | W>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781860911 CA3447180 |
436 | W>G | No |
ClinGen ExAC gnomAD |
|
|
CA3447182 rs527429618 |
438 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782440770 CA3447184 |
441 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA3447186 rs548657178 |
443 | V>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3447185 rs782586512 |
443 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA361293437 rs1554124610 |
445 | V>L | No |
ClinGen gnomAD |
|
|
rs1554124614 CA361293456 |
446 | A>T | No |
ClinGen gnomAD |
|
|
rs1554124616 CA361293487 |
447 | D>G | No |
ClinGen gnomAD |
|
|
rs1554124622 CA361293540 |
450 | D>Y | No |
ClinGen gnomAD |
|
|
CA3447189 rs782256529 |
452 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3447191 rs782621345 |
453 | P>L | No |
ClinGen ExAC TOPMed |
|
|
rs782172662 CA3447192 |
454 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs782321736 CA3447193 |
454 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1379449486 CA361293701 |
457 | Q>* | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 464 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1301708433 CA361293925 |
466 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1445142594 CA361293943 |
467 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1554124643 CA361294008 |
468 | N>K | No |
ClinGen gnomAD |
|
|
CA361293993 rs1581694483 |
468 | N>T | No |
ClinGen Ensembl |
|
|
CA361294017 rs868962455 |
469 | P>S | No |
ClinGen Ensembl |
|
|
rs868962455 CA361294013 |
469 | P>T | No |
ClinGen Ensembl |
|
|
COSM3239877 CA3447197 rs781956119 COSM448776 |
470 | P>L | central_nervous_system breast [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1554124647 CA361294059 |
471 | G>A | No |
ClinGen TOPMed |
|
|
CA361294056 rs1554124647 |
471 | G>D | No |
ClinGen TOPMed |
|
|
rs782103936 CA3447198 |
471 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781943764 CA3447201 |
472 | C>Y | No |
ClinGen ExAC |
|
|
CA361294121 rs1554124653 |
473 | H>R | No |
ClinGen gnomAD |
|
|
rs1554124655 CA361294235 |
476 | T>A | No |
ClinGen gnomAD |
|
|
CA361294251 rs1554124656 |
476 | T>I | No |
ClinGen gnomAD |
|
|
CA361294294 rs1165249307 |
477 | V>E | No |
ClinGen TOPMed |
|
|
rs549483688 CA3447203 |
477 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1554124661 CA361294315 |
478 | S>F | No |
ClinGen gnomAD |
|
|
rs1554124657 CA361294299 |
478 | S>T | No |
ClinGen TOPMed |
|
|
rs1257156985 CA361294328 |
479 | A>S | No |
ClinGen TOPMed |
|
|
CA361294324 rs1257156985 |
479 | A>T | No |
ClinGen TOPMed |
|
|
rs1181544885 CA361294340 |
479 | A>V | No |
ClinGen TOPMed |
|
|
CA361296591 rs1206477664 |
480 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA3447207 rs781834509 |
480 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs115173372 CA3447206 |
480 | W>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs115173372 CA361296584 |
480 | W>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 481 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782443934 CA3447208 |
481 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs1483022520 CA361296635 |
483 | D>N | No |
ClinGen TOPMed |
|
|
rs144422081 CA3447209 |
484 | A>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs144422081 CA361296669 |
484 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1311531851 CA361296697 |
486 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1554124677 CA361296768 |
489 | L>P | No |
ClinGen gnomAD |
|
|
CA3447214 rs782365511 |
489 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA3447216 rs782195065 |
490 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA361296837 rs1554124681 |
493 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1554124680 CA361296824 |
493 | S>P | No |
ClinGen gnomAD |
|
|
rs782417866 CA3447217 |
494 | L>Q | No |
ClinGen ExAC |
|
|
CA3447218 rs782032441 |
496 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 496 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs146494318 CA3447221 |
497 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3447219 rs369858637 COSM322522 |
497 | R>W | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs782098483 CA3447222 |
498 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3447224 rs781798904 |
499 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA3447223 rs782685843 |
499 | V>I | No |
ClinGen ExAC TOPMed |
|
|
CA3447226 rs782814995 |
501 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs140993559 CA3447228 |
502 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3447227 rs140993559 |
502 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3447229 rs555898168 |
502 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554124703 CA361297018 |
505 | S>P | No |
ClinGen gnomAD |
|
|
rs115774628 CA3447230 |
506 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1562218779 CA361297047 |
506 | S>R | No |
ClinGen Ensembl |
|
|
CA361297074 rs1212194365 |
507 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
CA361297089 rs1265286248 |
508 | V>G | No |
ClinGen TOPMed |
|
|
rs782467255 CA3447231 |
508 | V>I | Variant assessed as Somatic; 0.0001386 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs538251882 CA3447232 |
509 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs782371086 CA3447234 |
510 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1288388505 CA361297127 |
511 | H>Y | No |
ClinGen TOPMed |
|
|
rs577899528 CA3447236 |
512 | A>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361297146 rs1348144933 |
512 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA3447237 rs114390057 |
513 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361297166 rs114390057 |
513 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361297199 rs559957887 |
514 | S>I | No |
ClinGen 1000Genomes |
|
|
CA128376502 rs559957887 |
514 | S>N | No |
ClinGen 1000Genomes |
|
|
CA361297212 rs1554124735 |
515 | G>R | No |
ClinGen gnomAD |
|
|
rs1554124735 CA361297210 COSM1061944 |
515 | G>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1554124738 CA361297220 |
515 | G>V | No |
ClinGen gnomAD |
|
|
CA361297244 rs1389730174 |
516 | K>N | No |
ClinGen TOPMed |
|
|
CA361297247 rs1291582762 |
517 | V>M | No |
ClinGen TOPMed |
|
|
rs374265125 CA3447240 |
518 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782024587 CA3447241 |
519 | A>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 519 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361297322 rs1581696399 |
520 | L>R | No |
ClinGen Ensembl |
|
|
rs1554124750 CA361297330 |
521 | Q>* | No |
ClinGen gnomAD |
|
|
rs1554124761 CA361297353 |
522 | P>L | No |
ClinGen gnomAD |
|
|
CA3447242 rs782107494 |
522 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782729225 CA3447243 |
523 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447244 rs781847203 |
524 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA361297395 rs1554124765 |
525 | H>N | No |
ClinGen gnomAD |
|
|
CA361297409 rs150405058 CA3447245 |
525 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554124770 CA361297417 |
526 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs142480630 CA3447248 |
528 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781867451 CA3447250 |
531 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 532 | Q>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1465939551 CA361297616 |
536 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs782615790 CA361297618 |
537 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs782615790 CA3447252 |
537 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3447253 rs139276513 |
537 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA361297635 rs1207755540 |
538 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA361297632 rs1207755540 |
538 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3447255 rs533708736 |
539 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1554124813 CA361297680 |
540 | A>G | No |
ClinGen gnomAD |
|
| TCGA novel | 541 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1233807402 CA361297688 |
541 | G>S | No |
ClinGen TOPMed |
|
| TCGA novel | 542 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782363831 CA3447257 |
543 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs782363831 CA361297736 |
543 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1554124825 CA361297781 |
544 | P>L | No |
ClinGen gnomAD |
|
|
rs142005186 CA3447260 |
546 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs142005186 CA3447259 |
546 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361297817 rs1437037170 |
546 | G>S | No |
ClinGen TOPMed |
|
|
rs142005186 CA361297851 |
546 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361297868 rs1456969374 |
547 | S>G | No |
ClinGen TOPMed |
|
|
CA361297878 rs1382810188 |
548 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1382810188 CA361297881 |
548 | N>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs782815654 CA3447263 |
549 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA361297938 rs1554124834 |
550 | T>A | No |
ClinGen gnomAD |
|
|
rs782131323 CA3447265 |
550 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs782131323 CA361297948 |
550 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs1554124838 CA361297980 |
552 | Q>K | No |
ClinGen gnomAD |
|
|
rs542272513 CA128376525 |
553 | V>M | No |
ClinGen gnomAD |
|
|
CA361298047 TCGA novel rs1466970963 |
554 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen TOPMed gnomAD |
|
CA3447268 rs781838352 |
555 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1377582762 CA361298061 |
555 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
COSM163310 rs1377582762 CA361298054 |
555 | V>M | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA361298116 rs1451689285 |
557 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA361298139 rs782428956 |
558 | E>D | No |
ClinGen ExAC gnomAD |
|
|
COSM1433788 rs267600385 CA128376528 |
558 | E>K | lung large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs567779090 CA3447271 |
560 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3447270 rs567779090 |
560 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA361298254 rs782630901 |
562 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs782630901 CA3447273 |
562 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA3447276 rs146197308 |
564 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361298336 rs1344157467 |
565 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1344157467 CA361298338 |
565 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3447278 rs782412304 |
565 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA3447280 rs782248203 |
567 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447281 rs782248203 |
567 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554124867 CA361298361 |
567 | A>T | No |
ClinGen gnomAD |
|
|
CA361298369 rs782248203 |
567 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447284 COSM1619592 rs782706780 |
568 | P>L | liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361298387 rs1296615329 |
568 | P>S | No |
ClinGen TOPMed |
|
|
rs782804250 CA3447287 COSM1061948 |
569 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3447286 rs13189658 |
569 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA3447288 rs781855860 |
570 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554124875 CA361298456 |
570 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361298534 rs1554124877 |
573 | T>I | No |
ClinGen gnomAD |
|
|
rs1554124881 CA361298576 |
575 | G>D | No |
ClinGen gnomAD |
|
|
rs782513861 CA3447289 |
575 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361298588 rs1396651990 |
576 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3447291 rs781794115 |
577 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1562220905 CA361298637 |
578 | S>N | No |
ClinGen Ensembl |
|
|
CA3447292 rs782455168 |
579 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782292532 CA3447294 |
581 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361298704 rs1581698199 |
582 | P>S | No |
ClinGen Ensembl |
|
|
rs553655178 CA3447295 |
583 | W>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554124895 CA361298719 |
583 | W>G | No |
ClinGen gnomAD |
|
|
rs1554124895 CA361298721 |
583 | W>R | No |
ClinGen gnomAD |
|
|
rs782653809 CA3447296 |
584 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs782653809 CA361298789 |
584 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs1554124905 CA361298808 |
585 | V>G | No |
ClinGen gnomAD |
|
|
CA3447297 rs782219196 |
585 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA3447298 rs782358037 |
586 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA361298812 rs1554124908 |
586 | G>S | No |
ClinGen gnomAD |
|
|
CA361298872 rs1554124909 |
587 | V>A | No |
ClinGen gnomAD |
|
|
CA361298945 rs1554124911 |
589 | H>Q | No |
ClinGen gnomAD |
|
|
CA3447300 rs781916233 |
590 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1369862214 COSM3393188 CA361298950 |
590 | V>M | pancreas [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA361298992 rs1554124915 |
591 | V>G | No |
ClinGen gnomAD |
|
|
rs142493803 CA3447301 |
592 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554124924 CA361299031 |
593 | K>T | No |
ClinGen gnomAD |
|
|
CA361299048 rs1554124926 |
594 | V>M | No |
ClinGen gnomAD |
|
|
CA361299076 rs1441304336 |
595 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1441304336 CA361299081 |
595 | R>L | No |
ClinGen TOPMed |
|
|
rs879959461 CA361299069 |
595 | R>S | No |
ClinGen gnomAD |
|
|
CA3447302 rs782400718 |
596 | A>P | No |
ClinGen ExAC |
|
|
CA3447303 rs781991192 |
596 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361299114 rs1554124934 |
597 | V>A | No |
ClinGen gnomAD |
|
|
CA361299104 rs1554124931 |
597 | V>M | No |
ClinGen gnomAD |
|
|
CA361299233 rs1554124940 |
601 | S>* | No |
ClinGen gnomAD |
|
|
rs782057126 CA3447309 |
602 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs17844283 CA3447311 CA361299343 |
604 | N>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 605 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 606 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs267600386 CA128376572 |
608 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361299477 rs1562221741 |
609 | Y>* | No |
ClinGen Ensembl |
|
|
CA361299451 rs1225926404 |
609 | Y>N | No |
ClinGen TOPMed |
|
|
CA3447313 rs782755918 |
613 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782569898 CA3447312 |
613 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs139851359 CA3447315 |
614 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361299627 rs1554124952 |
615 | T>N | No |
ClinGen gnomAD |
|
|
rs1554124952 CA361299641 |
615 | T>S | No |
ClinGen gnomAD |
|
|
rs782614839 CA3447316 |
617 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA3447318 rs782455641 COSM205055 |
618 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3447320 rs782283778 |
619 | R>C | No |
ClinGen ExAC |
|
| TCGA novel | 619 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1061954 CA361299724 rs1311161177 |
619 | R>H | large_intestine Variant assessed as Somatic; impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1311161177 CA361299730 |
619 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs782636095 CA3447322 |
620 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA3447323 rs782208317 COSM736296 |
621 | P>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1307759029 CA361299798 |
622 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1554124966 CA361299812 |
623 | R>C | Variant assessed as Somatic; 4.633e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs576133564 CA3447325 |
623 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs576133564 CA361299823 |
623 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554124969 CA361299849 |
624 | V>A | No |
ClinGen gnomAD |
|
|
rs1554124972 CA361299860 |
625 | G>E | No |
ClinGen gnomAD |
|
|
rs782422711 CA3447327 |
625 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA361299866 rs1554124972 |
625 | G>V | No |
ClinGen gnomAD |
|
|
rs543142225 CA3447329 |
626 | L>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA128376600 rs149719719 |
627 | Y>C | No |
ClinGen ESP |
|
|
CA361299921 rs1554124981 |
628 | T>A | No |
ClinGen gnomAD |
|
|
CA361299996 rs1554124986 |
630 | E>D | No |
ClinGen gnomAD |
|
|
rs1183753194 CA361300011 |
631 | I>T | No |
ClinGen TOPMed |
|
| TCGA novel | 632 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1250955428 CA361300071 |
633 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361300092 rs1554124989 |
633 | T>R | No |
ClinGen gnomAD |
|
|
CA361300120 COSM330475 rs1202399974 |
634 | T>M | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA3447333 rs746844684 |
635 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA128376605 COSM736294 rs746844684 |
635 | R>G | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs376395074 CA3447334 COSM1433792 |
635 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3447335 rs782551783 |
636 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361300164 rs782551783 |
636 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361300210 CA361300203 rs781864694 |
638 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782619886 CA3447336 |
638 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs532147064 CA3447338 |
639 | E>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA128376619 rs532147064 |
639 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs540996422 CA361300248 |
640 | T>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3447339 rs540996422 COSM163308 |
640 | T>M | breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA3447340 rs782204017 |
642 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs17844284 COSM3239932 CA3447342 |
643 | P>L | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed |
|
rs782409819 CA3447341 |
643 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142688560 CA3447343 |
644 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs142688560 CA3447344 |
644 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554125014 CA361300396 |
646 | R>C | No |
ClinGen gnomAD |
|
|
COSM1433796 rs147674000 CA3447346 |
646 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs147674000 CA3447345 |
646 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3447348 rs781933598 |
647 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361300448 rs1562222868 |
648 | L>P | No |
ClinGen Ensembl |
|
|
rs1554125021 CA361300527 |
651 | V>A | No |
ClinGen gnomAD |
|
|
rs1581700225 CA361300511 |
651 | V>L | No |
ClinGen Ensembl |
|
|
CA361300590 rs1554125024 |
653 | D>E | No |
ClinGen gnomAD |
|
|
CA3447350 rs782812274 |
654 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA361300609 rs1554125027 |
654 | H>Y | No |
ClinGen gnomAD |
|
|
rs370475370 CA128376648 |
655 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
|
CA361300642 rs1554125029 |
655 | G>S | No |
ClinGen gnomAD |
|
|
CA3447352 rs558715293 |
656 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447353 rs567757480 |
656 | E>D | No |
ClinGen 1000Genomes ExAC |
|
|
rs558715293 COSM1739092 CA361300663 |
656 | E>K | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs558715293 CA3447351 |
656 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142332964 CA3447355 |
657 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs142332964 CA3447354 |
657 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3447357 rs146303235 |
658 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs146303235 COSM313954 CA3447358 |
658 | A>T | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs147908793 CA3447359 |
658 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3447361 rs782482719 |
659 | L>V | Variant assessed as Somatic; 4.623e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1275758806 CA361300777 |
660 | T>M | No |
ClinGen TOPMed |
|
|
CA361300820 rs1554125055 |
662 | T>A | No |
ClinGen gnomAD |
|
|
rs782188990 CA3447364 |
662 | T>K | No |
ClinGen ExAC gnomAD |
|
|
rs1554125067 CA361300939 |
665 | V>G | No |
ClinGen gnomAD |
|
|
rs782248044 CA3447367 |
665 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA3447370 rs782091901 |
668 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs1435429734 CA361301038 |
670 | V>L | No |
ClinGen TOPMed |
|
|
rs1387208859 CA361301103 |
672 | S>R | No |
ClinGen TOPMed |
|
|
CA3447372 rs782023023 |
673 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs782769972 CA3447374 |
674 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs1554125084 CA361301195 |
675 | A>E | No |
ClinGen gnomAD |
|
|
CA361301212 COSM1433798 rs1554125084 |
675 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1425817282 CA361301346 |
680 | S>L | No |
ClinGen TOPMed |
|
|
CA361301365 rs1452307952 |
681 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1452307952 CA361301362 |
681 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA128376686 rs538670718 |
682 | A>T | No |
ClinGen 1000Genomes |
|
|
CA361301389 rs1190740414 |
682 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361301430 rs1465518164 |
684 | V>M | No |
ClinGen TOPMed |
|
|
CA361301469 rs1241553010 |
685 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1554125099 CA361301456 |
685 | G>R | No |
ClinGen gnomAD |
|
|
CA361301464 rs1241553010 |
685 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3447383 rs553716577 |
686 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361301483 rs1554125101 |
686 | A>V | No |
ClinGen gnomAD |
|
|
CA361301525 rs782209352 |
688 | G>D | Variant assessed as Somatic; 4.621e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3447384 rs782209352 |
688 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs1314068849 CA361301530 |
689 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs150467607 COSM205059 CA128376699 |
690 | D>N | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP NCI-TCGA TOPMed |
|
CA3447386 rs565672389 |
691 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1554125107 CA361301614 |
692 | A>S | No |
ClinGen gnomAD |
|
|
CA361301663 rs1554125113 |
694 | V>G | No |
ClinGen gnomAD |
|
|
CA3447388 rs782439695 |
695 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA3447389 rs781990926 |
697 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 699 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3447390 rs782137059 |
699 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA3447391 rs782732716 |
700 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs781967550 CA3447392 |
701 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs782054971 CA3447393 |
702 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 703 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554125121 CA361301891 |
703 | A>V | No |
ClinGen gnomAD |
|
|
CA361301945 rs1449558535 |
705 | C>* | No |
ClinGen TOPMed gnomAD |
|
|
CA361301967 rs1554125129 |
706 | A>E | No |
ClinGen gnomAD |
|
|
rs1554125126 CA361301952 |
706 | A>P | No |
ClinGen Ensembl |
|
|
CA361301972 COSM213554 rs1554125129 |
706 | A>V | breast [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA3447395 rs17844285 |
707 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361301996 rs1554125135 |
708 | S>F | No |
ClinGen gnomAD |
|
|
rs1333425784 CA361302012 |
709 | S>R | No |
ClinGen TOPMed |
|
|
CA3447396 rs782158465 |
711 | L>* | No |
ClinGen ExAC |
|
|
CA361302029 rs782158465 |
711 | L>W | No |
ClinGen ExAC |
|
|
CA361302042 rs1169021514 |
712 | V>L | No |
ClinGen TOPMed |
|
|
rs1554125144 CA361302053 |
713 | L>F | No |
ClinGen gnomAD |
|
|
rs1419045044 CA361302069 |
714 | T>R | No |
ClinGen TOPMed |
|
|
CA361302082 rs1185037292 |
715 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA128376716 rs782036778 |
716 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs782036778 CA361302091 |
716 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs576165362 CA128376718 |
717 | L>P | No |
ClinGen 1000Genomes |
|
|
rs1554125155 CA361302116 |
718 | Y>* | No |
ClinGen gnomAD |
|
|
rs782466044 CA3447399 |
718 | Y>H | No |
ClinGen ExAC |
|
|
CA3447401 rs138998178 |
720 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 724 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 724 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782686583 COSM589666 CA3447403 |
725 | A>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3447408 rs543555386 |
727 | P>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3447409 rs543555386 |
727 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3447407 rs782392679 |
727 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3447406 rs782392679 |
727 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs782154101 CA3447411 |
729 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361302274 rs1554125172 COSM1061962 |
730 | G>D | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs77547730 CA128376742 |
731 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs558389511 CA3447413 |
732 | C>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs558389511 CA361302308 |
732 | C>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1554125176 CA361302302 |
732 | C>Y | No |
ClinGen gnomAD |
|
|
rs1379248044 CA361302315 |
733 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361302312 COSM1061966 rs1379248044 |
733 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs782714901 CA3447415 |
734 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 735 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554125184 CA361302364 |
736 | K>N | No |
ClinGen gnomAD |
|
| TCGA novel | 737 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781909645 CA3447419 |
738 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA3447423 rs782496896 |
740 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA3447422 rs781828358 |
740 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3447425 rs782200079 |
741 | C>* | No |
ClinGen ExAC gnomAD |
|
|
CA361302433 rs782561720 |
741 | C>F | No |
ClinGen ExAC gnomAD |
|
|
CA3447424 rs782561720 |
741 | C>S | No |
ClinGen ExAC gnomAD |
|
|
rs1428831386 CA361302438 |
742 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3447426 rs541059549 |
743 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs145922941 CA3447427 |
743 | S>I | No |
ClinGen ESP ExAC gnomAD |
|
|
rs145922941 CA361302443 |
743 | S>N | No |
ClinGen ESP ExAC gnomAD |
|
|
CA361302448 rs1168580497 |
744 | A>P | No |
ClinGen TOPMed |
|
|
COSM1261273 CA361302452 rs1554125201 |
744 | A>V | oesophagus [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA361302460 rs1562225455 |
745 | V>A | No |
ClinGen Ensembl |
|
|
rs1554125205 CA361302455 |
745 | V>L | No |
ClinGen Ensembl |
|
|
CA3447428 rs782243123 |
748 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA361302498 rs1554125207 |
748 | W>* | No |
ClinGen gnomAD |
|
|
rs760109122 CA128376763 |
749 | S>L | No |
ClinGen Ensembl |
|
|
rs1187355294 CA361302549 |
751 | S>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1187355294 CA361302551 |
751 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3447429 rs148640226 |
751 | S>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1187355294 CA361302550 |
751 | S>W | No |
ClinGen TOPMed gnomAD |
|
|
CA361302558 rs1554125216 |
752 | Q>* | No |
ClinGen gnomAD |
|
|
rs782301046 CA3447432 |
753 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782301046 CA3447433 |
753 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 755 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361302658 rs1554125221 |
758 | V>G | No |
ClinGen gnomAD |
|
|
CA3447436 rs782009545 |
759 | C>S | No |
ClinGen ExAC gnomAD |
|
|
COSM589662 rs1223238346 CA361302716 |
762 | E>D | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1250038191 CA361302702 COSM1294164 |
762 | E>K | cervix [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA361302730 rs782745865 |
763 | G>A | No |
ClinGen ExAC TOPMed |
|
|
rs782745865 CA3447439 |
763 | G>D | No |
ClinGen ExAC TOPMed |
|
|
rs150783892 CA3447437 |
763 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554125241 CA361302749 |
764 | P>L | No |
ClinGen gnomAD |
|
|
rs782448560 CA3447441 |
764 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554125246 CA361302759 |
765 | P>R | No |
ClinGen gnomAD |
|
|
rs1554125244 CA361302751 |
765 | P>S | No |
ClinGen gnomAD |
|
|
rs782810628 CA361302804 |
768 | D>E | No |
ClinGen ExAC gnomAD |
|
|
COSM1719890 CA361302793 rs1554125251 |
768 | D>N | Variant assessed as Somatic; 0.0 impact. NS liver [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs782500159 CA3447444 |
770 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs782212508 CA3447446 |
773 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs782212508 CA3447447 |
773 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs782554104 CA3447449 |
774 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs782554104 CA3447448 |
774 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1288901774 CA361302887 |
774 | P>S | No |
ClinGen TOPMed |
|
|
CA361302896 rs1390804817 |
775 | S>G | No |
ClinGen TOPMed |
|
|
CA3447450 rs374214403 |
775 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA361302903 rs868909071 |
775 | S>R | No |
ClinGen Ensembl |
|
|
CA361302899 rs374214403 |
775 | S>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554125265 CA361302913 |
776 | L>S | No |
ClinGen gnomAD |
|
|
CA3447453 rs782270940 |
781 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs781993408 CA3447452 |
781 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs782351603 CA3447454 |
782 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs138003823 CA3447455 |
783 | E>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782730163 CA3447457 |
784 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs782016802 CA3447458 |
787 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs782750036 CA3447460 |
789 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs782462557 CA3447462 |
790 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3447461 rs781870287 |
790 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3447463 rs782739291 |
791 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs781790264 CA3447464 |
792 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs781790264 CA3447465 |
792 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1554125289 CA361303184 |
795 | K>E | No |
ClinGen gnomAD |
|
|
rs782672479 CA3447466 |
795 | K>N | No |
ClinGen ExAC |
|
|
rs782073950 CA3454452 |
796 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA361259520 rs1490306705 |
796 | P>S | No |
ClinGen TOPMed |
|
|
rs374951627 CA3454453 |
797 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781913955 CA3454454 |
797 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA3454455 rs781913955 |
797 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782109224 CA3454458 |
802 | D>H | No |
ClinGen ExAC |
|
|
COSM3696815 COSM3696819 COSM3696826 COSM3696817 CA3454459 COSM3696814 COSM3696822 COSM3696816 COSM3696828 COSM3696812 COSM3696820 rs782774245 COSM3696813 COSM3696823 COSM3696825 COSM3696821 COSM3696827 COSM3696818 COSM3696824 |
803 | W>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361259640 rs782774245 |
803 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA3454460 rs141879545 |
804 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454463 rs781815387 |
807 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138901709 CA3454464 |
808 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782686641 CA3454465 |
809 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1363421000 CA361259736 |
810 | R>I | No |
ClinGen TOPMed |
|
|
rs1586790986 CA361259751 |
811 | A>G | No |
ClinGen Ensembl |
|
|
CA3454466 rs782253140 |
812 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454467 rs782336746 |
813 | M>V | No |
ClinGen ExAC |
|
|
CA361259787 rs1554240128 |
814 | H>N | No |
ClinGen gnomAD |
|
|
rs149397164 CA3454468 |
815 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782426631 CA3454484 |
816 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782587733 CA3454485 |
816 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs782426631 CA361260538 |
816 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1181664726 CA361260559 |
817 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361260577 rs1554244276 |
818 | H>P | No |
ClinGen gnomAD |
|
|
COSM1062442 COSM1062448 COSM1062450 rs782273708 COSM1062445 COSM1062454 COSM1062455 COSM1062443 COSM1062452 COSM1062456 COSM1062457 COSM1062451 COSM1062453 COSM1062449 COSM1062447 CA3454486 COSM1062444 |
818 | H>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3454488 rs782634646 |
820 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454487 rs782419098 |
820 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs147537783 CA3454489 |
821 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs981642614 CA128362369 |
822 | A>T | No |
ClinGen Ensembl |
|
|
rs782347331 CA3454490 |
823 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260711 rs1468199443 |
824 | I>V | No |
ClinGen TOPMed |
|
|
rs555523473 CA3454493 |
826 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139355257 CA3454492 |
826 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782025005 CA3454494 |
828 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260802 rs1278779763 |
829 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3454495 rs201991205 |
831 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454497 rs201572428 |
833 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3454496 rs782766562 |
833 | D>V | No |
ClinGen ExAC |
|
|
rs1554244431 CA361260933 |
835 | Q>R | No |
ClinGen gnomAD |
|
|
CA3454498 rs782094765 |
836 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454499 RCV000950135 rs79247475 |
837 | P>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA128362405 rs369053351 |
837 | P>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1554244455 CA361260996 |
838 | T>A | No |
ClinGen gnomAD |
|
|
CA3454501 rs782544627 |
839 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454502 rs577838197 |
841 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454504 rs781852534 |
841 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs781852534 CA3454503 |
841 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs782605920 CA3454505 |
841 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs199851685 CA3454506 |
843 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454507 rs782437404 |
844 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs560422677 CA3454508 |
844 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs560422677 CA3454509 |
844 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361261129 rs782437404 |
844 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782179145 CA3454531 |
845 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454532 rs782321757 |
848 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554262240 CA361268348 |
850 | E>G | No |
ClinGen gnomAD |
|
|
rs781996586 CA3454536 |
856 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1179266 rs782079089 COSM1179264 COSM1179272 COSM1179273 COSM1179269 COSM1179270 COSM1179277 COSM1179268 COSM1179263 COSM1179271 COSM1179278 COSM1179275 COSM1179276 COSM1179265 CA3454537 COSM1179267 COSM1179274 |
857 | A>V | lung prostate [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1588246273 CA361268557 |
859 | V>G | No |
ClinGen Ensembl |
|
|
CA3454540 rs782068657 |
859 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1563727066 CA361268679 |
863 | S>N | No |
ClinGen Ensembl |
|
|
COSM139598 COSM139601 COSM139604 COSM139606 COSM139609 COSM139603 COSM139600 COSM139611 COSM139608 rs1554262287 COSM139599 COSM139607 COSM139602 COSM139605 COSM139610 CA361268865 |
869 | G>E | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs900919931 CA128372514 |
869 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1554262289 CA361268920 |
871 | G>D | No |
ClinGen gnomAD |
|
|
CA3454542 rs575518914 |
873 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175529844 CA361268995 |
874 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3454543 rs782119637 |
876 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454546 rs552954748 |
877 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552954748 CA3454545 |
877 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs373683237 CA3454547 |
878 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1486746921 CA361269173 |
879 | G>S | No |
ClinGen TOPMed |
|
|
CA128372547 rs1057913 |
883 | D>A | No |
ClinGen Ensembl |
|
|
rs371269236 CA3454551 |
883 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454552 rs782334415 |
884 | K>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454553 rs782623559 |
887 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3454555 rs782328874 |
888 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454556 rs200822345 |
889 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454559 rs782009776 |
893 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142720081 CA361269729 |
893 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3454558 rs142720081 |
893 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782087059 CA3454560 |
894 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1289763016 CA361269834 |
896 | I>V | No |
ClinGen TOPMed |
|
|
rs760426957 CA3454562 |
897 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1166265 COSM1166271 COSM1166266 COSM1166268 COSM1166267 COSM1166273 COSM1166276 COSM1166277 COSM1166272 COSM1166264 COSM1166279 rs147351924 CA3454561 COSM1166275 COSM1166269 COSM1166278 COSM1166270 COSM1166274 |
897 | R>W | large_intestine haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA361269875 rs1554262408 |
898 | Q>K | No |
ClinGen gnomAD |
|
|
CA361269953 rs1554262420 |
900 | P>A | No |
ClinGen gnomAD |
|
|
CA361269962 rs1359138927 |
900 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1314860754 CA361269972 |
901 | T>A | No |
ClinGen TOPMed |
|
|
CA361270002 rs1554262437 |
902 | N>K | No |
ClinGen TOPMed |
|
|
CA3454564 rs148436868 |
903 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554262456 CA361270119 |
905 | I>T | No |
ClinGen gnomAD |
|
|
rs781853535 CA3454565 |
905 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529364872 CA128372646 |
906 | D>E | No |
ClinGen Ensembl |
|
|
CA3454567 rs142570778 |
906 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128372638 rs782057926 |
906 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3454568 rs781835321 |
907 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs782451974 CA3454569 |
910 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3454570 rs782578873 |
912 | T>I | No |
ClinGen ExAC |
|
|
rs782274123 CA3454571 |
913 | F>S | No |
ClinGen ExAC gnomAD |
|
|
COSM216699 COSM216705 CA3454573 COSM216710 rs782642898 COSM1158471 COSM216696 COSM216700 COSM216702 COSM216709 COSM216704 COSM216698 COSM216697 COSM216706 COSM216707 COSM216701 COSM216703 COSM216708 |
914 | G>S | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454574 rs782270689 |
916 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs782270689 CA361270554 |
916 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1259591783 CA361270565 |
917 | E>Q | No |
ClinGen TOPMed |
|
|
CA361270593 rs1554262487 |
918 | E>D | No |
ClinGen gnomAD |
|
|
CA3454575 rs782348993 |
919 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs781972089 CA3454577 |
920 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554262492 CA361270633 |
920 | K>R | No |
ClinGen gnomAD |
|
|
rs374660085 CA3454578 |
925 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361270828 rs1554262513 |
926 | K>R | No |
ClinGen gnomAD |
|
|
CA3454579 rs782413551 |
927 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782413551 CA361270853 |
927 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307653192 CA361270984 |
930 | K>N | No |
ClinGen TOPMed |
|
|
CA128372721 rs184181976 |
930 | K>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
rs1554262529 CA361271070 |
933 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782776948 CA3454583 |
935 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3454584 rs781954349 |
938 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361271296 rs1295693430 |
939 | N>D | No |
ClinGen TOPMed |
|
|
rs1554262551 CA361271322 |
939 | N>K | No |
ClinGen gnomAD |
|
|
CA361271306 rs1415929182 |
939 | N>S | No |
ClinGen TOPMed |
|
|
CA128372734 rs958247947 |
940 | S>G | No |
ClinGen Ensembl |
|
|
CA128372735 rs17855798 |
940 | S>N | No |
ClinGen Ensembl |
|
|
COSM1434122 COSM1434119 CA3454585 COSM1434134 COSM1434133 COSM1434130 COSM1434131 COSM1434125 COSM1434126 COSM1434124 COSM1434127 COSM1434129 COSM1434121 COSM1434120 COSM1434123 rs199928168 COSM1434128 COSM1434132 |
941 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA361271405 rs1301104421 |
942 | T>A | No |
ClinGen TOPMed |
|
|
CA361271440 rs1554262572 |
943 | D>E | No |
ClinGen gnomAD |
|
|
CA361271462 rs1463725058 |
944 | N>Y | No |
ClinGen TOPMed |
No associated diseases with Q9UN74
12 regional properties for Q9UN74
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Cadherin-like | 34 - 122 | IPR002126-1 |
| domain | Cadherin-like | 123 - 250 | IPR002126-2 |
| domain | Cadherin-like | 250 - 358 | IPR002126-3 |
| domain | Cadherin-like | 359 - 474 | IPR002126-4 |
| domain | Cadherin-like | 464 - 574 | IPR002126-5 |
| domain | Cadherin-like | 590 - 686 | IPR002126-6 |
| domain | Cadherin, N-terminal | 19 - 101 | IPR013164 |
| conserved_site | Cadherin conserved site | 110 - 120 | IPR020894-1 |
| conserved_site | Cadherin conserved site | 238 - 248 | IPR020894-2 |
| conserved_site | Cadherin conserved site | 451 - 461 | IPR020894-3 |
| conserved_site | Cadherin conserved site | 562 - 572 | IPR020894-4 |
| domain | Cadherin, cytoplasmic C-terminal domain | 713 - 838 | IPR032455 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium ion binding | Binding to a calcium ion (Ca2+). |
| identical protein binding | Binding to an identical protein or proteins. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cell adhesion | The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
| homophilic cell adhesion via plasma membrane adhesion molecules | The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell. |
| nervous system development | The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. |
46 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q3SWX5 | CDH6 | Cadherin-6 | Bos taurus (Bovine) | PR |
| P79995 | CDH10 | Cadherin-10 | Gallus gallus (Chicken) | PR |
| Q8UVJ7 | CDHR1 | Cadherin-related family member 1 | Gallus gallus (Chicken) | PR |
| Q5DRC8 | PCDHB6 | Protocadherin beta-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE4 | PCDHA8 | Protocadherin alpha-8 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE6 | PCDHA6 | Protocadherin alpha-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF0 | PCDHA2 | Protocadherin alpha-2 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE7 | PCDHA5 | Protocadherin alpha-5 | Pan troglodytes (Chimpanzee) | PR |
| Q9VJB6 | CadN2 | Putative neural-cadherin 2 | Drosophila melanogaster (Fruit fly) | PR |
| Q9ULB4 | CDH9 | Cadherin-9 | Homo sapiens (Human) | PR |
| P12830 | CDH1 | Cadherin-1 | Homo sapiens (Human) | PR |
| Q9H159 | CDH19 | Cadherin-19 | Homo sapiens (Human) | PR |
| Q9Y6N8 | CDH10 | Cadherin-10 | Homo sapiens (Human) | PR |
| P55285 | CDH6 | Cadherin-6 | Homo sapiens (Human) | PR |
| P19022 | CDH2 | Cadherin-2 | Homo sapiens (Human) | PR |
| Q6ZTQ4 | CDHR3 | Cadherin-related family member 3 | Homo sapiens (Human) | PR |
| Q9BZA8 | PCDH11Y | Protocadherin-11 Y-linked | Homo sapiens (Human) | PR |
| Q08174 | PCDH1 | Protocadherin-1 | Homo sapiens (Human) | PR |
| Q9HC56 | PCDH9 | Protocadherin-9 | Homo sapiens (Human) | PR |
| Q9P2E7 | PCDH10 | Protocadherin-10 | Homo sapiens (Human) | PR |
| Q9Y5H8 | PCDHA3 | Protocadherin alpha-3 | Homo sapiens (Human) | PR |
| Q9UN75 | PCDHA12 | Protocadherin alpha-12 | Homo sapiens (Human) | PR |
| Q9Y5I2 | PCDHA10 | Protocadherin alpha-10 | Homo sapiens (Human) | PR |
| Q9UN72 | PCDHA7 | Protocadherin alpha-7 | Homo sapiens (Human) | PR |
| Q9Y5I1 | PCDHA11 | Protocadherin alpha-11 | Homo sapiens (Human) | PR |
| Q9Y5H7 | PCDHA5 | Protocadherin alpha-5 | Homo sapiens (Human) | PR |
| Q9UN73 | PCDHA6 | Protocadherin alpha-6 | Homo sapiens (Human) | PR |
| Q9Y5H6 | PCDHA8 | Protocadherin alpha-8 | Homo sapiens (Human) | PR |
| Q9Y5I3 | PCDHA1 | Protocadherin alpha-1 | Homo sapiens (Human) | PR |
| Q9Y5H9 | PCDHA2 | Protocadherin alpha-2 | Homo sapiens (Human) | PR |
| Q9Y5H3 | PCDHGA10 | Protocadherin gamma-A10 | Homo sapiens (Human) | PR |
| O60330 | PCDHGA12 | Protocadherin gamma-A12 | Homo sapiens (Human) | PR |
| Q9Y5G4 | PCDHGA9 | Protocadherin gamma-A9 | Homo sapiens (Human) | PR |
| Q9Y5G0 | PCDHGB5 | Protocadherin gamma-B5 | Homo sapiens (Human) | PR |
| Q9Y5E3 | PCDHB6 | Protocadherin beta-6 | Homo sapiens (Human) | PR |
| Q9Y5F1 | PCDHB12 | Protocadherin beta-12 | Homo sapiens (Human) | PR |
| P09803 | Cdh1 | Cadherin-1 | Mus musculus (Mouse) | PR |
| P15116 | Cdh2 | Cadherin-2 | Mus musculus (Mouse) | PR |
| P70407 | Cdh9 | Cadherin-9 | Mus musculus (Mouse) | PR |
| P97326 | Cdh6 | Cadherin-6 | Mus musculus (Mouse) | PR |
| P70408 | Cdh10 | Cadherin-10 | Mus musculus (Mouse) | PR |
| Q8VHF2 | Cdhr5 | Cadherin-related family member 5 | Mus musculus (Mouse) | PR |
| O88689 | Pcdha4 | Protocadherin alpha-4 | Mus musculus (Mouse) | PR |
| P55280 | Cdh6 | Cadherin-6 | Rattus norvegicus (Rat) | PR |
| Q9Z1Y3 | Cdh2 | Cadherin-2 | Rattus norvegicus (Rat) | PR |
| Q767I8 | Pcdha4 | Protocadherin alpha-4 | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEFSWGSGQE | SRRLLLLLLL | LAAWEAGNGQ | LHYSVSEEAK | HGTFVGRIAQ | DLGLELAELV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PRLFRVASKG | RGGLLEVNLQ | NGILFVNSRI | DREELCRRSA | ECSIHLEVIV | DRPLQVFHVD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VEVRDINDNP | PVFPATQKNL | SIAESRPLDS | RFPLEGASDA | DIGENALLTY | RLSPNEYFSL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EKPPDDELVK | GLGLILRKSL | DREEAPEIFL | VLTATDGGKP | ELTGTVQLLI | TVLDANDNAP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| AFDRTIYKVR | LLENVPNGTL | VIKLNASDLD | EGLNGDIVYS | FSNDISPNVK | SKFHIDPITG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QIIVKGYIDF | EESKSYEIIV | EGIDKGQLPL | SGHCRVIVEV | EDNNDNVPDL | EFKSLSLPIR |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EDAPLGTVIA | LISVSDKDMG | VNGLVTCSLT | SHVPFKLVST | FKNYYSLVLD | SALDRESVSA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YELVVTARDG | GSPSLWATAS | VSVEVADVND | NAPAFAQPEY | TVFVKENNPP | GCHIFTVSAW |
| 490 | 500 | 510 | 520 | 530 | 540 |
| DADAQENALV | SYSLVERRVG | ERALSSYVSV | HAESGKVYAL | QPLDHEELEL | LQFQVTARDA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GVPPLGSNVT | LQVFVLDEND | NAPALLAPRA | GGTGGAVSEL | VPWSVGVGHV | VAKVRAVDAD |
| 610 | 620 | 630 | 640 | 650 | 660 |
| SGYNAWLSYE | LQPGTGGARI | PFRVGLYTGE | ISTTRALDET | DAPRHRLLVL | VKDHGEPALT |
| 670 | 680 | 690 | 700 | 710 | 720 |
| ATATVLVSLV | ESGQAPKASS | RALVGAVGPD | AALVDVNVYL | IIAICAVSSL | LVLTLLLYTA |
| 730 | 740 | 750 | 760 | 770 | 780 |
| LRCSALPTEG | ACAPGKPTLV | CSSAVGSWSY | SQQRRPRVCS | GEGPPKTDLM | AFSPSLPDSR |
| 790 | 800 | 810 | 820 | 830 | 840 |
| DREDQLQTTE | ESFAKPRQPN | PDWRYSASLR | AGMHSSVHLE | EAGILRAGPG | GPDQQWPTVS |
| 850 | 860 | 870 | 880 | 890 | 900 |
| SATPEPEAGE | VSPPVGAGVN | SNSWTFKYGP | GNPKQSGPGE | LPDKFIIPGS | PAIISIRQEP |
| 910 | 920 | 930 | 940 | ||
| TNSQIDKSDF | ITFGKKEETK | KKKKKKKGNK | TQEKKEKGNS | TTDNSDQ |