Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

3 structures for O88689

Entry ID Method Resolution Chain Position Source
1WUZ NMR - A 27-129 PDB
5DZW X-ray 243 A A 30-450 PDB
AF-O88689-F1 Predicted AlphaFoldDB

50 variants for O88689

Variant ID(s) Position Change Description Diseaes Association Provenance
rs24885023 11 S>P No EVA
rs236455201 89 R>W No EVA
rs3389497423 122 E>G No EVA
rs3389497378 137 Q>* No EVA
rs3389497454 203 E>D No EVA
rs3389508447 227 Q>H No EVA
rs3389503511 233 L>Q No EVA
rs24885031 239 A>S No EVA
rs24885032 262 V>I No EVA
rs24885034 276 D>N No EVA
rs24885035 358 P>L No EVA
rs3389488555 384 Q>H No EVA
rs24885036 391 S>N No EVA
rs24885037 420 D>G No EVA
rs3389503521 427 A>V No EVA
rs3389492763 459 E>K No EVA
rs3389499961 468 N>I No EVA
rs585317379 480 M>V No EVA
rs3389476001 495 V>M No EVA
rs3389475942 530 L>M No EVA
rs24885043 532 R>Q No EVA
rs3389510787 559 N>K No EVA
rs3389495853 586 G>S No EVA
rs3389497406 611 L>M No EVA
rs24885047 612 Q>K No EVA
rs24885048 616 G>S No EVA
rs24885049 624 V>I No EVA
rs24885050 625 G>S No EVA
rs3408253013 629 G>A No EVA
rs3408431419 629 G>R No EVA
rs24885053 636 I>A No EVA
rs257527861 636 I>T No EVA
rs13489528 636 I>V No EVA
rs3389405583 639 E>G No EVA
rs3389497398 657 P>S No EVA
rs13489529 661 V>F No EVA
rs3389496231 685 S>C No EVA
rs250448853 686 V>A No EVA
rs3389488593 687 T>I No EVA
rs1131814018 688 H>D No EVA
rs1132656963 688 H>P No EVA
rs24885055 696 V>I No EVA
rs13489530 752 Q>H No EVA
rs3388438143 759 C>Y No EVA
rs3389503526 767 T>N No EVA
rs3389508446 784 D>N No EVA
rs3389497431 786 L>* No EVA
rs3389492780 828 G>D No EVA
rs3389491513 836 W>C No EVA
rs3389488566 869 G>* No EVA

No associated diseases with O88689

10 regional properties for O88689

Type Name Position InterPro Accession
domain Cadherin-like 20 - 133 IPR002126-1
domain Cadherin-like 134 - 242 IPR002126-2
domain Cadherin-like 242 - 350 IPR002126-3
domain Cadherin-like 351 - 565 IPR002126-4
domain Cadherin-like 581 - 681 IPR002126-5
domain Cadherin, N-terminal 30 - 111 IPR013164
conserved_site Cadherin conserved site 230 - 240 IPR020894-1
conserved_site Cadherin conserved site 443 - 453 IPR020894-2
conserved_site Cadherin conserved site 553 - 563 IPR020894-3
domain Cadherin, C-terminal catenin-binding domain 797 - 930 IPR031904

Functions

Description
EC Number
Subcellular Localization
  • Cell membrane ; Single-pass type I membrane protein
  • Detected in dendrites and synapses
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

4 GO annotations of cellular component

Name Definition
endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
integral component of plasma membrane The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
synapse The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.

2 GO annotations of molecular function

Name Definition
calcium ion binding Binding to a calcium ion (Ca2+).
identical protein binding Binding to an identical protein or proteins.

2 GO annotations of biological process

Name Definition
cell adhesion The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
homophilic cell adhesion via plasma membrane adhesion molecules The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell.

4 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q9UN74 PCDHA4 Protocadherin alpha-4 Homo sapiens (Human) PR
Q8VHF2 Cdhr5 Cadherin-related family member 5 Mus musculus (Mouse) PR
Q91Y11 Pcdha9 Protocadherin alpha-9 Mus musculus (Mouse) PR
Q767I8 Pcdha4 Protocadherin alpha-4 Rattus norvegicus (Rat) PR
10 20 30 40 50 60
MEFSWGSGQE SQRLLLSFLL LAIWEAGNSQ IHYSIPEEAK HGTFVGRIAQ DLGLELTELV
70 80 90 100 110 120
PRLFRVASKD RGDLLEVNLQ NGILFVNSRI DREELCGRSA ECSIHLEVIV DRPLQVFHVE
130 140 150 160 170 180
VEVRDINDNP PRFPTTQKNL FIAESRPLDT WFPLEGASDA DIGINAVLTY RLSPNDYFSL
190 200 210 220 230 240
EKPSNDERVK GLGLVLRKSL DREETPEIIL VLTVTDGGKP ELTGSVQLLI TVLDANDNAP
250 260 270 280 290 300
VFDRSLYTVK LPENVPNGTL VVKVNASDLD EGVNGDIMYS FSTDISPNVK YKFHIDPVSG
310 320 330 340 350 360
EIIVKGYIDF EECKSYEILI EGIDKGQLPL SGHCKVIVQV EDINDNVPEL EFKSLSLPIR
370 380 390 400 410 420
ENSPVGTVIA LISVSDRDTG VNGQVTCSLT SHVPFKLVST FKNYYSLVLD SALDRETTAD
430 440 450 460 470 480
YKVVVTARDG GSPSLWATAS VSVEVADVND NAPVFAQPEY TVFVKENNPP GAHIFTVSAM
490 500 510 520 530 540
DADAQENALV SYSLVERRVG ERLLSSYVSV HAESGKVFAL QPLDHEELEL LRFQVSARDA
550 560 570 580 590 600
GVPALGSNVT LQVFVLDEND NAPTLLEPEA GVSGGIVSRL VSRSVGAGHV VAKVRAVDAD
610 620 630 640 650 660
SGYNAWLSYE LQSSEGNSRS LFRVGLYTGE ISTTRILDEA DSPRQRLLVL VKDHGDPAMI
670 680 690 700 710 720
VTATVLVSLV ENGPVPKAPS RVSTSVTHSE ASLVDVNVYL IIAICAVSSL LVLTLLLYTA
730 740 750 760 770 780
LRCSTVPSES VCGPPKPVMV CSSAVGSWSY SQQRRQRVCS GEYPPKTDLM AFSPSLSDSR
790 800 810 820 830 840
DREDQLQSAE DSSGKPRQPN PDWRYSASLR AGMHSSVHLE EAGILRAGPG GPDQQWPTVS
850 860 870 880 890 900
SATPEPEAGE VSPPVGAGVN SNSWTFKYGP GNPKQSGPGE LPDKFIIPGS PAIISIRQEP
910 920 930 940
ANNQIDKSDF ITFGKKEETK KKKKKKKGNK TQEKKEKGNS TTDNSDQ