Q9Y5H8
Gene name |
PCDHA3 |
Protein name |
Protocadherin alpha-3 |
Names |
PCDH-alpha-3 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:56145 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9Y5H8
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9Y5H8-F1 | Predicted | AlphaFoldDB |
981 variants for Q9Y5H8
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000034872 rs587776956 CA130976 |
584 | S>P | Variant of unknown significance [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000508600 CA3454461 rs150254638 |
807 | R>H | Hirschsprung disease, susceptibility to, 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs782110175 CA3446159 |
5 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA3446160 rs782740358 |
5 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs781998335 CA3446158 |
5 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1482637194 CA361255015 |
6 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs539562114 CA3446161 |
6 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3446163 rs782702902 |
8 | D>G | No |
ClinGen ExAC |
|
|
rs782060470 CA3446162 |
8 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs782060470 CA361255077 |
8 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA3446165 rs781901922 |
9 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781901922 CA3446164 |
9 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs143390889 CA3446166 |
10 | G>E | No |
ClinGen ESP ExAC TOPMed |
|
|
CA128371483 rs557580137 |
10 | G>R | No |
ClinGen 1000Genomes gnomAD |
|
|
rs782473874 CA3446168 |
11 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782589053 CA3446169 |
12 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs1554121325 CA361255219 |
12 | Q>R | No |
ClinGen gnomAD |
|
|
CA3446171 rs782420859 |
16 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446173 rs782251011 |
22 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554121337 CA361255444 |
22 | A>S | No |
ClinGen gnomAD |
|
|
CA3446174 rs782368455 |
24 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446176 rs782078417 |
25 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3446175 rs781968055 |
25 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554121348 CA361255584 |
27 | G>R | No |
ClinGen Ensembl |
|
|
CA3446177 CA3446178 COSM3946918 rs150081104 |
28 | S>R | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA3446179 rs782159759 |
29 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361255614 rs782159759 |
29 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554121357 CA361255674 |
31 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 31 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361255680 rs1554121363 |
31 | L>P | No |
ClinGen gnomAD |
|
|
CA361255691 rs1554121367 |
32 | H>R | No |
ClinGen gnomAD |
|
|
CA128371559 rs376147788 |
33 | Y>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA3446181 rs781856490 |
33 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
CA3446182 rs782102566 |
34 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554121379 COSM1219563 CA361255755 |
35 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA3446185 rs782440931 |
36 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3446187 rs781891946 |
38 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA3446186 rs782696520 |
38 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1489581574 CA361255850 |
39 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs200755369 CA3446188 |
41 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361255881 rs1266329271 |
41 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3446190 rs138727039 |
42 | G>R | No |
ClinGen ESP ExAC |
|
|
COSM1219571 CA361255935 rs1554121393 |
43 | T>N | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA361255995 rs1581641335 |
46 | G>R | No |
ClinGen Ensembl |
|
|
rs1554121401 COSM1219565 CA361256026 |
47 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs782016888 CA3446195 COSM1486357 |
48 | I>M | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
COSM283795 rs782257139 CA3446196 |
49 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs574825520 CA3446197 |
49 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 50 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361256062 rs1554121412 |
50 | Q>R | No |
ClinGen gnomAD |
|
|
rs1554121420 CA361256089 |
52 | L>P | No |
ClinGen gnomAD |
|
|
CA361256094 CA361256095 rs1554121426 |
53 | G>R | No |
ClinGen gnomAD |
|
|
rs199783721 CA361256123 COSM3239602 CA3446200 |
55 | E>D | liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA361256119 rs1554121433 |
55 | E>G | No |
ClinGen gnomAD |
|
|
rs542094254 CA3446201 |
57 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1456655666 CA361256147 |
58 | E>A | No |
ClinGen TOPMed |
|
|
CA3446202 rs782156109 |
58 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA361256171 rs1581641791 |
60 | V>G | No |
ClinGen Ensembl |
|
|
rs781848330 CA3446204 |
60 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs781848330 CA361256166 |
60 | V>M | No |
ClinGen ExAC gnomAD |
|
|
VAR_061060 CA3446205 rs7731327 |
61 | P>Q | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1554121455 CA361256177 |
61 | P>S | No |
ClinGen gnomAD |
|
|
rs782738715 CA3446206 |
62 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA3446207 rs147415938 |
62 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446209 rs782680310 |
63 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1554121466 CA361256208 |
64 | F>L | No |
ClinGen gnomAD |
|
|
CA361256198 rs1581641946 |
64 | F>L | No |
ClinGen Ensembl |
|
| TCGA novel | 65 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1433600970 CA361256240 |
67 | A>T | No |
ClinGen TOPMed |
|
|
CA128371638 rs985372322 |
69 | K>Q | No |
ClinGen Ensembl |
|
|
CA361256348 rs149543626 |
72 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446215 rs149543626 |
72 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3446213 COSM3239606 CA3446214 rs201362111 |
72 | G>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs781922932 CA3446217 |
73 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA3446219 rs528555541 |
75 | L>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3446221 rs782125063 |
77 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs782008104 CA3446220 |
77 | V>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
rs782752855 CA3446222 |
79 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776837907 CA3446223 |
80 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA3446224 rs782061266 |
82 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs546691914 CA3446225 |
83 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361256550 rs1554121478 |
83 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361256584 rs1313179646 |
84 | L>F | No |
ClinGen TOPMed |
|
|
CA128371687 rs180779710 |
84 | L>M | No |
ClinGen 1000Genomes TOPMed |
|
|
rs562041671 CA128371707 |
85 | F>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA361256605 rs1554121484 |
86 | V>M | No |
ClinGen gnomAD |
|
|
rs1231634560 CA361258308 |
88 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1562179138 CA361258316 COSM1061856 |
89 | R>Q | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs781900612 CA3446226 |
89 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361258345 rs1366673472 |
90 | I>L | No |
ClinGen TOPMed |
|
|
rs782148660 CA3446227 |
90 | I>T | No |
ClinGen ExAC |
|
|
rs781855381 CA3446229 |
91 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1433804601 CA361258361 |
91 | D>H | No |
ClinGen TOPMed |
|
| TCGA novel | 91 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782595645 CA3446231 |
92 | R>L | No |
ClinGen ExAC |
|
|
CA3446230 rs782465156 |
92 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782568249 CA361258460 |
95 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3446233 rs782568249 |
95 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529252017 COSM1541722 CA3446235 |
96 | C>* | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1554121508 CA361258498 |
97 | G>E | No |
ClinGen gnomAD |
|
|
CA361258495 COSM736336 CA361258489 rs1392326756 |
97 | G>R | lung kidney prostate [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA361258492 rs1392326756 |
97 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
CA3446236 rs782381789 |
98 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361258542 rs1554121517 |
99 | S>R | No |
ClinGen gnomAD |
|
|
rs569133317 CA3446238 |
101 | E>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs539262034 CA3446239 |
101 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361258566 rs1554121521 |
102 | C>R | No |
ClinGen gnomAD |
|
| TCGA novel | 102 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 103 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 105 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs566462269 CA3446242 |
106 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3446243 rs782003148 |
110 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs533872769 CA3446245 |
113 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1343853054 CA361258715 |
113 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs533872769 CA3446246 |
113 | P>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs369003662 CA3446247 |
116 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1581643370 CA361258757 |
116 | V>G | No |
ClinGen Ensembl |
|
|
rs1554121539 CA361258763 |
117 | F>L | No |
ClinGen gnomAD |
|
|
CA3446250 rs374486178 |
118 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782806333 CA3446248 |
118 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782642948 CA3446251 |
119 | V>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 120 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361258846 rs1554121548 |
121 | V>A | No |
ClinGen gnomAD |
|
|
CA3446253 CA11982828 rs782460705 |
121 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782460705 CA361258834 |
121 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782579018 CA3446254 |
123 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA361258923 rs1554121550 |
125 | D>G | No |
ClinGen gnomAD |
|
|
rs545790169 CA128371857 |
128 | D>G | No |
ClinGen Ensembl |
|
|
CA128371873 rs896701889 |
130 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA361259056 rs1581643759 |
131 | P>L | No |
ClinGen Ensembl |
|
|
CA3446256 rs782429900 |
131 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs554968998 CA128371897 |
132 | V>I | No |
ClinGen 1000Genomes |
|
|
CA3446258 rs782256695 |
133 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs868943817 CA361259116 |
134 | P>L | No |
ClinGen gnomAD |
|
|
CA361259107 rs1431439199 |
134 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361259142 rs1554121564 |
135 | M>I | No |
ClinGen gnomAD |
|
|
rs1554121563 CA361259128 |
135 | M>T | No |
ClinGen gnomAD |
|
|
rs377695293 CA3446259 |
135 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM205041 rs781971806 CA3446260 |
136 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs371019133 CA3446261 |
136 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1581643978 CA361259183 |
137 | V>G | No |
ClinGen Ensembl |
|
|
rs782314428 CA3446262 |
137 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA3446266 rs146287685 CA3446265 COSM1219575 |
138 | K>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD NCI-TCGA |
|
CA128371918 rs902709557 |
139 | N>I | No |
ClinGen Ensembl |
|
|
rs781989124 CA3446267 |
140 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782603795 CA3446269 |
143 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs1554121583 CA361259329 |
143 | S>Y | No |
ClinGen gnomAD |
|
|
rs1554121590 CA361259353 |
144 | E>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 145 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361259369 rs1554121592 |
145 | S>T | No |
ClinGen gnomAD |
|
|
CA3446270 rs782739143 |
145 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs368118741 CA128371924 |
146 | R>G | No |
ClinGen ESP |
|
|
CA3446271 rs781799825 |
146 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA361259403 rs139627437 |
147 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446273 rs139627437 |
147 | Q>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139627437 CA3446274 |
147 | Q>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3446276 rs782644121 |
148 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs144280703 CA128371932 |
148 | P>S | No |
ClinGen ESP |
|
|
CA3446278 rs782455687 |
151 | R>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 155 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3446281 rs782405787 |
156 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554121620 CA361259542 |
157 | A>P | No |
ClinGen gnomAD |
|
|
CA3446284 rs557240435 |
159 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs781947710 CA3446285 |
161 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs781947710 CA361259641 |
161 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs563939423 CA3446286 |
162 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128371965 rs111499856 |
163 | G>E | No |
ClinGen TOPMed |
|
|
CA3446288 rs782708273 CA3446287 |
163 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361259684 rs111499856 |
163 | G>V | No |
ClinGen TOPMed |
|
|
rs782155880 CA3446289 |
165 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446292 rs35124371 COSM1061860 |
166 | S>L | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA3446291 rs35124371 |
166 | S>W | No |
ClinGen TOPMed |
|
|
CA3446296 rs782584193 |
170 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA3446298 rs782723045 |
170 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs546101434 CA361259825 |
170 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA3446297 rs546101434 |
170 | Y>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA128371982 rs374513389 |
174 | S>C | No |
ClinGen ESP TOPMed |
|
|
rs1554121645 CA361259896 |
176 | E>K | No |
ClinGen gnomAD |
|
|
rs1554121649 CA361259929 |
178 | F>C | No |
ClinGen gnomAD |
|
|
CA3446301 rs371671577 |
180 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128372021 rs965302343 |
182 | V>G | No |
ClinGen gnomAD |
|
|
rs1554121657 CA361259978 |
182 | V>I | No |
ClinGen gnomAD |
|
|
rs1181981505 CA361260014 |
185 | N>D | No |
ClinGen TOPMed |
|
|
CA361260043 rs1554121673 |
187 | E>G | No |
ClinGen gnomAD |
|
|
rs782663776 CA3446302 |
187 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782260016 CA3446303 |
188 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782500534 CA3446304 |
191 | S>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs199857246 CA128372037 |
192 | L>F | No |
ClinGen Ensembl |
|
|
rs564667115 CA3446305 |
192 | L>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3446306 rs143901113 |
193 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA128372041 rs372016432 |
194 | L>F | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs983876946 CA128372052 |
195 | V>A | No |
ClinGen Ensembl |
|
|
CA3446309 rs782302106 |
195 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1230159283 CA361260241 |
196 | L>W | No |
ClinGen TOPMed gnomAD |
|
|
rs782409849 CA3446312 |
199 | N>D | No |
ClinGen ExAC gnomAD |
|
| rs782411180 | 199 | N>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1439840316 CA361260330 |
199 | N>K | No |
ClinGen TOPMed gnomAD |
|
| rs782411180 | 199 | N>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3446313 rs141036392 |
200 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361260384 rs782120718 |
202 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs782120718 CA3446314 |
202 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs375139618 CA128372082 |
204 | D>G | No |
ClinGen ESP TOPMed |
|
|
rs927009690 CA128372083 |
205 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs781955396 CA361260420 |
205 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA3446316 rs781955396 |
205 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA361260432 rs1393875873 |
206 | P>A | No |
ClinGen TOPMed |
|
|
rs1163331311 CA361260439 |
206 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1163331311 CA361260442 |
206 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs782046235 CA3446317 |
208 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1562181721 CA361260486 |
208 | H>Q | No |
ClinGen Ensembl |
|
|
CA128372085 rs369589944 |
208 | H>R | No |
ClinGen ESP TOPMed |
|
|
rs782046235 CA3446318 |
208 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781883611 CA3446320 |
209 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446319 rs782251225 |
209 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1378951068 CA361260528 |
210 | L>S | No |
ClinGen TOPMed |
|
|
CA3446322 rs782758348 |
214 | A>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 215 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3446323 rs781833245 |
216 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM736334 rs1465290845 CA361260723 |
218 | G>E | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs782466455 CA3446324 |
218 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA361260737 rs1581646062 |
219 | K>I | No |
ClinGen Ensembl |
|
|
CA361260754 rs782570230 |
220 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA3446325 rs782570230 |
220 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA361260795 rs781796006 |
221 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781796006 CA3446326 |
221 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 223 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782680832 CA3446328 |
224 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs375984847 CA3446329 |
225 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375984847 CA3446330 |
225 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782622621 CA3446331 |
226 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446332 rs373073076 |
227 | Q>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782326685 CA3446333 |
229 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446334 rs782030457 |
230 | I>V | No |
ClinGen ExAC |
|
|
rs1562182134 CA361261058 |
231 | T>A | No |
ClinGen Ensembl |
|
|
rs782143369 CA3446335 |
231 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA128372210 rs782272543 |
232 | V>I | No |
ClinGen Ensembl |
|
|
COSM1061866 CA3446336 rs782383281 |
233 | L>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA361261175 rs1389986057 |
236 | N>K | No |
ClinGen TOPMed |
|
|
rs1554121756 CA361261181 |
237 | D>H | No |
ClinGen gnomAD |
|
|
CA361261228 rs1554121763 |
238 | N>K | No |
ClinGen gnomAD |
|
|
rs377749394 CA3446338 |
238 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781803444 CA361261252 |
239 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782723863 CA361261243 |
239 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782723863 CA3446339 |
239 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361261240 rs782723863 |
239 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs781803444 CA3446340 |
239 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128372239 rs936870383 |
240 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs782045551 CA3446341 |
240 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3446342 rs782821105 |
241 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA3446345 rs374257547 |
244 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446346 rs374257547 |
244 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361261365 rs1554121771 |
245 | T>K | No |
ClinGen gnomAD |
|
|
rs1554121775 CA361261395 |
247 | Y>C | No |
ClinGen gnomAD |
|
|
rs1189907348 CA361261447 |
250 | R>G | No |
ClinGen TOPMed |
|
|
rs1053967488 CA128372306 |
251 | L>F | No |
ClinGen gnomAD |
|
|
CA3446350 rs782295263 |
251 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554121782 CA361261480 |
252 | L>F | No |
ClinGen gnomAD |
|
|
CA361261525 rs1554121786 |
254 | N>K | No |
ClinGen gnomAD |
|
|
CA128372308 rs782413136 |
254 | N>S | No |
ClinGen Ensembl |
|
|
CA3446351 rs782400821 |
255 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA3446353 rs145878786 |
256 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446352 rs17844252 |
256 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782352875 CA3446355 |
258 | G>D | No |
ClinGen ExAC gnomAD |
|
| rs781928400 | 258 | G>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1019600841 CA128372309 |
259 | T>N | No |
ClinGen Ensembl |
|
|
rs148995634 CA3446356 |
260 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782630700 CA3446357 |
261 | V>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1199727898 CA361261616 |
261 | V>L | No |
ClinGen TOPMed |
|
|
COSM589707 CA128372343 rs994082843 |
263 | T>I | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs782305894 CA3446358 |
264 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA3446359 rs782305894 |
264 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1554121819 CA361261686 COSM205045 |
266 | A>T | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1554121822 CA361261697 |
266 | A>V | No |
ClinGen gnomAD |
|
|
CA361261705 rs868957551 |
267 | T>I | No |
ClinGen Ensembl |
|
|
CA361261750 rs1301585258 |
270 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs952664867 CA128372367 |
272 | G>R | No |
ClinGen gnomAD |
|
|
rs983887476 CA128372368 |
274 | N>S | No |
ClinGen Ensembl |
|
|
CA361261830 rs1554121829 |
275 | K>R | No |
ClinGen gnomAD |
|
|
CA361261899 rs1230635185 |
277 | I>M | No |
ClinGen TOPMed |
|
|
rs1554121830 CA361261906 |
278 | A>S | No |
ClinGen gnomAD |
|
|
CA361261932 rs1554121833 |
279 | Y>H | No |
ClinGen gnomAD |
|
|
rs782776274 CA361262023 |
282 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs781990436 CA3446363 |
283 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781990436 CA3446362 |
283 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361262058 rs1361472766 |
284 | D>H | No |
ClinGen TOPMed |
|
|
rs782437392 CA3446366 |
285 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 285 | M>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781808156 CA3446365 |
285 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA361262089 rs1554121847 |
285 | M>V | No |
ClinGen gnomAD |
|
|
rs17844253 CA3446368 |
286 | S>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs17844253 CA3446367 |
286 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554121856 CA361262153 |
288 | D>G | No |
ClinGen gnomAD |
|
|
rs3733709 VAR_048524 CA3446369 |
289 | I>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1554121857 CA361262169 |
289 | I>V | No |
ClinGen gnomAD |
|
|
CA361262206 rs1554121864 |
291 | S>* | No |
ClinGen gnomAD |
|
|
rs1554121862 CA361262194 |
291 | S>T | No |
ClinGen Ensembl |
|
|
CA3446370 rs782606319 |
294 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs978364846 CA128372411 |
298 | V>I | No |
ClinGen TOPMed |
|
|
CA361262423 rs1418174507 |
301 | Q>L | No |
ClinGen TOPMed |
|
|
CA3446374 rs370933207 |
306 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs370933207 CA3446373 |
306 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs17844255 CA128372432 |
307 | N>S | No |
ClinGen Ensembl |
|
| TCGA novel | 308 | I>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782414359 CA3446375 |
308 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs924147913 CA128372444 |
308 | I>T | No |
ClinGen TOPMed |
|
|
rs1554121874 CA361262577 |
308 | I>V | No |
ClinGen gnomAD |
|
|
CA361262604 rs1554121877 |
309 | D>Y | No |
ClinGen gnomAD |
|
|
CA128372451 rs782244607 |
311 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446377 rs782244607 |
311 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1484578726 CA361262707 |
313 | S>G | No |
ClinGen TOPMed |
|
|
rs1554121883 CA361262716 |
313 | S>N | No |
ClinGen gnomAD |
|
|
CA361262738 rs1554121887 |
314 | K>Q | No |
ClinGen gnomAD |
|
|
rs781954887 CA361262773 |
315 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs781954887 CA3446379 |
315 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA361262767 rs1278406367 |
315 | S>P | No |
ClinGen TOPMed |
|
|
rs1554121894 CA361262797 |
316 | Y>* | No |
ClinGen gnomAD |
|
|
rs782702448 CA3446381 |
316 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1053927999 CA128372470 |
316 | Y>H | No |
ClinGen Ensembl |
|
|
CA3446382 rs200090365 |
317 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782759775 CA361262836 |
318 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782759775 CA3446384 |
318 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
VAR_021874 CA3446383 rs3733708 |
318 | I>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA3446385 rs781836341 |
319 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA3446386 rs782459087 |
320 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446387 rs782724131 COSM3409808 |
323 | T>M | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554121915 CA361262980 |
324 | D>E | No |
ClinGen gnomAD |
|
|
CA361262972 rs1353989161 |
324 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1353989161 CA361262974 |
324 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
rs148196865 CA128372481 |
326 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs146951816 CA3446388 |
328 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446389 rs146951816 |
328 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 329 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782510527 CA3446392 |
330 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA3446391 rs782273094 |
330 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs782672395 CA3446390 |
330 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs138143542 CA3446393 |
331 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1581648778 CA361263137 |
332 | D>V | No |
ClinGen Ensembl |
|
| TCGA novel | 334 | C>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782325970 CA3446395 |
334 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 334 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554121944 CA361263205 |
335 | T>R | No |
ClinGen gnomAD |
|
|
rs1554121948 CA361263214 |
336 | V>I | No |
ClinGen gnomAD |
|
|
rs1554121948 CA361263217 |
336 | V>L | No |
ClinGen gnomAD |
|
|
CA3446396 rs782580003 |
338 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1406650011 CA361263267 |
339 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
COSM1061874 CA361263261 rs1406650011 |
339 | E>K | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1562184152 CA361263301 |
340 | I>T | No |
ClinGen Ensembl |
|
|
CA361263310 rs1554121955 |
341 | V>M | No |
ClinGen gnomAD |
|
|
CA3446398 rs782389437 |
342 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs782098091 CA3446400 |
348 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 351 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3446404 rs782045341 |
354 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 354 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361263677 rs1581649332 |
356 | S>C | No |
ClinGen Ensembl |
|
|
CA361263713 rs1232566500 |
358 | P>S | No |
ClinGen TOPMed |
|
|
rs781881144 CA3446406 |
360 | L>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1202505238 CA361263779 |
361 | E>D | No |
ClinGen TOPMed |
|
|
rs370205855 CA3446407 |
362 | D>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs958561465 CA361263820 |
363 | S>F | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 363 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361263805 rs1323608017 |
363 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
rs958561465 CA128372531 |
363 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1554122000 CA361263844 |
365 | L>V | No |
ClinGen gnomAD |
|
| TCGA novel | 366 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA128372534 rs992529407 |
366 | S>N | No |
ClinGen Ensembl |
|
|
rs1554122006 CA361263914 |
367 | T>R | No |
ClinGen gnomAD |
|
|
CA3446409 rs373674603 |
368 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA |
|
CA3446410 rs782478059 |
369 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361263966 rs1290587407 |
370 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1290587407 COSM176943 CA361263962 |
370 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs782597355 CA3446411 |
370 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361263987 rs782640012 |
371 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446416 rs782357287 |
373 | S>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 374 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs372206309 CA3446418 |
374 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361264103 rs1581649993 |
376 | D>A | No |
ClinGen Ensembl |
|
|
CA361264117 rs1554122039 |
376 | D>E | No |
ClinGen gnomAD |
|
|
CA361264096 rs1459793883 |
376 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1459793883 CA361264099 |
376 | D>Y | No |
ClinGen TOPMed |
|
|
rs1554122041 CA361264138 |
377 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782306537 CA3446419 COSM205047 |
378 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA361264287 rs925654009 |
382 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3446420 rs782026683 |
383 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1407472224 CA361264365 |
384 | Q>* | No |
ClinGen TOPMed |
|
|
CA3446421 rs782137990 |
384 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA361264414 rs1175732642 |
385 | V>I | No |
ClinGen TOPMed |
|
|
CA361264446 rs1489467507 |
386 | T>A | No |
ClinGen TOPMed |
|
|
CA3446422 rs782400027 |
387 | C>F | No |
ClinGen ExAC gnomAD |
|
|
CA361264608 rs1467501869 |
390 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1467501869 CA361264606 |
390 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3446427 rs782055752 |
391 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs781811725 CA3446426 |
391 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1270625936 CA361264674 |
392 | H>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA128372675 rs782096760 |
392 | H>R | No |
ClinGen gnomAD |
|
|
CA128372693 rs782803218 |
393 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446428 rs782803218 |
393 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361264687 rs782803218 |
393 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361264735 rs1304325749 |
394 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs782625772 CA3446431 |
395 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361264771 rs1554122092 |
395 | F>L | No |
ClinGen gnomAD |
|
|
rs375377871 CA128372698 |
396 | K>N | No |
ClinGen ESP TOPMed |
|
|
rs1302053906 CA361264779 |
396 | K>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs201585398 CA128372718 |
400 | T>A | No |
ClinGen Ensembl |
|
|
CA361264940 rs1321170045 |
400 | T>I | No |
ClinGen TOPMed |
|
|
rs781823322 CA3446433 |
401 | F>I | No |
ClinGen ExAC gnomAD |
|
|
rs368374216 CA3446434 |
402 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554122100 CA361265053 |
403 | N>S | No |
ClinGen gnomAD |
|
|
CA3446436 rs782292816 |
404 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554122110 CA361265155 |
405 | Y>C | No |
ClinGen gnomAD |
|
|
CA361265139 rs1554122105 |
405 | Y>H | No |
ClinGen gnomAD |
|
| TCGA novel | 406 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA128372740 rs138645965 |
408 | V>L | No |
ClinGen ESP TOPMed |
|
|
COSM589695 CA361265268 rs1554122119 |
409 | L>M | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA128372745 rs1047484049 |
411 | S>R | No |
ClinGen gnomAD |
|
|
CA3446440 rs782361767 |
412 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1452683213 CA361265420 |
414 | D>N | No |
ClinGen TOPMed |
|
|
CA3446442 rs782205225 |
415 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs782314655 CA3446443 |
415 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3446445 rs782040160 CA3446444 |
417 | S>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC TOPMed gnomAD NCI-TCGA |
|
rs111580112 CA128372754 |
418 | V>A | No |
ClinGen Ensembl |
|
|
CA3446447 rs149312681 |
418 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs149312681 CA3446446 |
418 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446448 rs573377233 COSM287627 |
419 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs372311136 CA3446450 |
421 | Y>C | No |
ClinGen ESP ExAC gnomAD |
|
|
CA3446449 rs782703795 |
421 | Y>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs540789660 CA3446451 |
422 | E>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781868454 CA3446453 |
422 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446452 rs540789660 |
422 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361265843 rs1231379923 |
424 | V>G | No |
ClinGen TOPMed |
|
|
rs1279226863 CA361265812 |
424 | V>M | No |
ClinGen TOPMed |
|
|
CA361265870 rs1296125051 |
426 | T>S | No |
ClinGen TOPMed |
|
|
CA128372783 rs1014002832 |
427 | A>P | No |
ClinGen Ensembl |
|
|
rs782212000 CA3446456 |
427 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1466401935 CA361268598 |
428 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA361268582 rs1466401935 |
428 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs998632844 CA128372804 |
429 | D>A | No |
ClinGen Ensembl |
|
|
rs782301588 CA361268615 |
429 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3446459 rs782301588 |
429 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446461 rs371780452 |
430 | G>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782408810 CA3446460 |
430 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs17844259 CA3446462 |
431 | G>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs142880719 CA3446465 |
433 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446464 rs142880719 |
433 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376536820 CA3446467 |
436 | W>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361268911 rs376536820 |
436 | W>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446466 rs782816418 |
436 | W>G | No |
ClinGen ExAC gnomAD |
|
|
CA3446468 rs533106648 |
437 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 439 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361269011 rs1260307397 |
439 | A>V | No |
ClinGen TOPMed |
|
|
CA3446472 rs782713590 |
440 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
VAR_048525 rs7701755 CA3446473 |
440 | S>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs7701755 CA361269048 |
440 | S>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446475 rs370096540 |
441 | V>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs577444100 CA361269060 |
441 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA3446474 rs577444100 |
441 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3446476 rs781874116 |
442 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1554122186 CA361269161 |
443 | V>M | No |
ClinGen gnomAD |
|
|
CA361269248 rs1554122187 |
445 | V>L | No |
ClinGen gnomAD |
|
| TCGA novel | 446 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782305354 CA3446480 |
448 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA3446479 COSM1261255 rs782192647 |
448 | V>M | lung Variant assessed as Somatic; 0.0 impact. liver oesophagus [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs374473436 CA3446482 |
449 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782666755 CA3446481 |
449 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361269399 rs1305664229 |
450 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA3446487 rs781941410 |
453 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA3446488 rs782054123 |
454 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA361269537 rs782054123 |
454 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361269571 rs1314796100 |
454 | A>V | No |
ClinGen TOPMed |
|
|
rs868939985 CA361269634 COSM233056 |
456 | S>L | Variant assessed as Somatic; impact. skin central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs1554122216 CA361269649 |
457 | Q>E | No |
ClinGen gnomAD |
|
|
rs1415125623 CA361269657 |
457 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1554122218 CA361269708 |
458 | S>Y | No |
ClinGen gnomAD |
|
|
CA361269725 rs1312440472 |
459 | E>K | No |
ClinGen TOPMed |
|
|
CA3446490 rs781885871 |
460 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361269854 rs1371799609 |
463 | F>L | No |
ClinGen TOPMed |
|
|
CA361269931 rs1475704020 |
464 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs781821131 CA3446494 CA361269925 |
464 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA3446493 rs781821131 |
464 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782569286 CA3446495 |
465 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128373053 CA361270093 rs922814873 |
467 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1581652947 CA361270122 |
468 | N>T | No |
ClinGen Ensembl |
|
|
rs782651284 CA3446498 |
469 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs782651284 CA361270194 |
469 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3446500 rs782355104 |
470 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446499 rs782236184 |
470 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA361270276 rs1194686534 |
471 | G>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 471 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 472 | C>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361270376 rs1554122246 |
473 | H>Q | No |
ClinGen gnomAD |
|
|
rs1554122250 CA361270404 |
475 | F>L | No |
ClinGen gnomAD |
|
| TCGA novel | 476 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782202213 CA3446502 |
476 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
rs1554122255 CA361270562 |
478 | S>F | No |
ClinGen gnomAD |
|
|
rs782317211 CA3446503 |
479 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA361270589 rs1554122256 |
479 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3446504 rs527490380 |
480 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782385485 CA3446506 |
481 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs868995021 CA361270624 |
481 | D>N | No |
ClinGen Ensembl |
|
|
rs781988680 CA3446507 |
482 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361270754 rs1230044523 |
483 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
COSM1061882 rs941404430 CA128373121 |
484 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs781790782 CA3446510 |
485 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs782788996 CA3446512 |
486 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs782166217 CA3446511 |
486 | E>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 486 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1581653520 CA361270960 |
488 | A>S | No |
ClinGen Ensembl |
|
|
rs139431952 CA3446513 |
488 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA361271004 rs1328452691 |
489 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1554122266 CA361271015 |
490 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782733330 CA361271051 |
491 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446515 rs782733330 |
491 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361271081 rs1554122273 |
492 | Y>C | No |
ClinGen gnomAD |
|
|
rs373853046 CA3446516 |
493 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs373853046 CA3446517 |
493 | S>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1363976699 CA361271191 |
495 | V>L | No |
ClinGen TOPMed |
|
|
rs1435507405 CA361271317 |
497 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA361271342 rs782575320 |
498 | R>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3446519 rs782575320 |
498 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs782575320 CA3446518 |
498 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782536982 CA3446520 |
499 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1268823463 CA361271365 |
499 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1268823463 CA361271359 |
499 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA3446525 rs567043012 |
501 | E>G | No |
ClinGen 1000Genomes |
|
|
CA3446524 rs781931721 |
501 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs531269900 CA3446528 |
502 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs531269900 CA3446527 |
502 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361271476 rs1554122295 |
502 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361271466 rs531269900 |
502 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782128283 CA3446530 |
503 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA128373253 rs528768034 |
505 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1554122299 CA361271566 |
505 | S>P | No |
ClinGen gnomAD |
|
|
CA361271606 rs1554122306 |
506 | S>N | No |
ClinGen gnomAD |
|
|
CA361271669 rs1554122310 |
508 | V>L | No |
ClinGen gnomAD |
|
|
rs781795094 CA3446536 |
511 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446538 rs782560612 |
512 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs782560612 CA3446537 |
512 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361271877 rs1554122323 |
514 | S>N | No |
ClinGen gnomAD |
|
|
CA3446540 rs141107649 |
515 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361271910 rs1554122326 |
515 | G>S | No |
ClinGen gnomAD |
|
|
CA3446539 rs141107649 |
515 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782614211 CA3446541 |
516 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs782212948 CA3446542 |
519 | A>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361272074 rs1386150414 |
519 | A>P | No |
ClinGen TOPMed |
|
|
rs782690309 CA3446544 |
521 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs782279296 CA3446545 |
521 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs782384957 CA3446546 |
522 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361272293 rs1554122342 |
526 | E>G | No |
ClinGen gnomAD |
|
|
CA128373375 rs964267504 |
527 | E>G | No |
ClinGen Ensembl |
|
|
CA128373373 rs1017296773 |
527 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3446550 rs781939384 |
528 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 529 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361272374 rs1554122360 |
529 | E>G | No |
ClinGen gnomAD |
|
|
rs375690529 CA3446552 |
532 | Q>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446555 rs782135685 |
537 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361272685 rs782135685 |
537 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781845951 CA3446557 |
538 | R>C | No |
ClinGen ExAC TOPMed |
|
|
CA3446561 rs145590069 |
539 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA128373426 rs909930689 |
539 | D>Y | No |
ClinGen Ensembl |
|
|
rs991420459 CA128373428 |
540 | A>G | No |
ClinGen TOPMed |
|
|
rs991420459 CA361272813 |
540 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782640007 CA3446563 |
541 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs781849256 CA3446564 |
542 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361272883 rs374629500 |
543 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446566 rs374629500 |
543 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446565 rs374629500 |
543 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1376843925 CA361272899 |
544 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1562189220 CA361272923 |
545 | L>P | No |
ClinGen Ensembl |
|
|
CA361272927 rs782195436 |
546 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446567 rs782195436 |
546 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782694897 CA3446569 |
548 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782279925 CA3446570 |
549 | V>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361273009 rs782279925 COSM1219567 |
549 | V>M | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1433757 CA3446571 rs782401655 |
550 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs148243447 CA3446573 |
552 | Q>K | No |
ClinGen ESP ExAC gnomAD |
|
|
rs567006708 CA361273113 |
554 | F>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs567006708 CA3446574 |
554 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1554122419 CA361273166 |
555 | V>A | No |
ClinGen gnomAD |
|
|
rs1241489643 CA361273160 |
555 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs199682432 CA3446577 |
557 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 558 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA128373482 rs915930472 |
558 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA361273265 rs1554122424 |
559 | N>S | No |
ClinGen gnomAD |
|
|
CA361273262 rs1554122424 |
559 | N>T | No |
ClinGen gnomAD |
|
|
rs782103564 CA361273276 |
560 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA3446579 rs782103564 |
560 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA128373508 rs200608373 |
562 | A>E | No |
ClinGen Ensembl |
|
|
rs190722768 CA3446580 |
562 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs934549073 CA361273375 |
565 | L>V | No |
ClinGen TOPMed |
|
| TCGA novel | 568 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758831845 CA3446583 |
568 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446584 rs758831845 |
568 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446582 rs782451626 |
568 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3446585 rs782553261 |
569 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA361273456 rs782553261 |
569 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs782648396 CA3446586 COSM589691 |
570 | V>M | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1357765961 CA361273496 |
571 | G>R | No |
ClinGen TOPMed |
|
|
CA361273492 rs1357765961 |
571 | G>S | No |
ClinGen TOPMed |
|
|
CA3446587 rs544698058 |
572 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782605739 CA3446589 |
573 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs892863974 CA361273547 |
574 | G>C | No |
ClinGen gnomAD |
|
|
CA128373546 rs892863974 |
574 | G>R | No |
ClinGen gnomAD |
|
|
rs145535421 CA3446590 |
575 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446591 rs782417048 |
576 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361273576 rs782417048 |
576 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361273618 rs1554122449 |
577 | V>A | No |
ClinGen gnomAD |
|
|
rs1418647702 CA361273593 |
577 | V>M | No |
ClinGen TOPMed |
|
|
rs1166121837 CA361273642 |
578 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA361273646 rs1554122453 |
579 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs782015955 CA3446592 |
580 | L>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361273735 TCGA novel rs1581656451 |
581 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
|
rs1187038094 CA361273781 |
582 | P>L | No |
ClinGen TOPMed |
|
|
CA3446595 rs780506250 |
582 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782172179 CA3446599 |
583 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782172179 CA361273809 |
583 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782172179 CA361273803 COSM1433759 |
583 | R>Q | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs375111738 CA3446598 |
583 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 584 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782235300 CA128373559 |
585 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1206653490 CA361273846 |
585 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1272838585 CA361273873 |
586 | G>S | No |
ClinGen TOPMed |
|
|
rs368124157 CA3446601 |
587 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA128373561 rs901539492 |
589 | H>Q | No |
ClinGen Ensembl |
|
|
rs1554122488 CA361274010 |
590 | V>G | No |
ClinGen gnomAD |
|
|
CA361273995 rs577958641 CA361273999 |
590 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3446602 rs577958641 |
590 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3446603 rs782761119 |
591 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs782454635 CA3446606 |
592 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA3446605 rs782454635 |
592 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1554122491 CA361274066 COSM403822 |
592 | A>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs782276594 CA3446607 |
593 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA361274118 rs1353160652 |
594 | V>G | No |
ClinGen TOPMed |
|
|
rs1299551760 CA361274146 |
595 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1299551760 CA361274136 |
595 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361274229 rs1462941214 |
598 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs782634798 CA3446609 |
598 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361274233 rs1462941214 |
598 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3446610 rs782219037 |
599 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3446612 rs781934902 |
600 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA361274302 rs1562190625 |
600 | D>Y | No |
ClinGen Ensembl |
|
|
CA3446613 rs782171071 |
601 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782171071 CA361274324 |
601 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361274343 rs1554122512 |
602 | G>A | No |
ClinGen gnomAD |
|
|
CA3446615 rs372042203 |
604 | N>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361274396 rs1411845849 |
604 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA361274421 rs982936754 |
605 | A>G | No |
ClinGen TOPMed |
|
|
rs782140638 CA3446616 |
605 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128373611 rs982936754 |
605 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361274438 rs1554122524 |
606 | W>* | No |
ClinGen gnomAD |
|
|
rs1554122523 CA361274428 |
606 | W>R | No |
ClinGen gnomAD |
|
|
rs1470197301 CA361274449 |
607 | L>V | No |
ClinGen TOPMed |
|
|
CA361274484 rs1274408864 COSM3609586 |
608 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA361274486 rs1274408864 |
608 | S>W | No |
ClinGen TOPMed gnomAD |
|
|
rs782082974 COSM736322 CA3446619 |
609 | Y>* | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361274511 rs1308617274 |
609 | Y>C | No |
ClinGen TOPMed |
|
|
rs1554122531 CA361274554 |
610 | E>G | No |
ClinGen gnomAD |
|
|
CA3446621 rs781793277 |
613 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA3446620 rs782709763 |
613 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554122539 CA361274710 |
614 | G>A | No |
ClinGen gnomAD |
|
|
CA3446622 rs782532560 COSM1541708 |
614 | G>R | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554122539 CA361274714 |
614 | G>V | No |
ClinGen gnomAD |
|
|
CA361274701 rs782532560 |
614 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554122543 CA361274728 |
615 | T>I | No |
ClinGen gnomAD |
|
|
CA361274720 rs1554122542 |
615 | T>P | No |
ClinGen gnomAD |
|
|
CA3446624 rs142788061 |
616 | G>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA361274741 rs142788061 |
616 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3446623 rs142788061 |
616 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554122549 CA361274766 |
617 | G>C | No |
ClinGen gnomAD |
|
|
rs1554122549 CA361274771 |
617 | G>S | No |
ClinGen gnomAD |
|
|
rs376717092 CA3446625 |
618 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 619 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1061900 rs1554122554 CA361274824 |
619 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1554122554 CA361274825 |
619 | R>P | No |
ClinGen gnomAD |
|
|
CA361274812 rs1442523455 |
619 | R>S | No |
ClinGen TOPMed |
|
|
CA361274864 rs782603015 |
620 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782186555 CA3446627 |
621 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1554122562 CA361274935 |
623 | R>G | No |
ClinGen gnomAD |
|
|
CA3446630 rs782285589 |
623 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs1346757216 CA361275036 |
626 | L>P | No |
ClinGen TOPMed |
|
|
rs781941927 CA3446635 |
627 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782345607 CA3446634 |
627 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782345607 CA361275075 |
627 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361275089 rs1407582648 |
628 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
rs868930578 CA361275131 |
629 | G>E | No |
ClinGen Ensembl |
|
|
rs782050127 CA3446636 |
629 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3446637 rs782438161 |
633 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs139788338 CA361275267 |
635 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs139788338 CA3446641 |
635 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA128373703 rs950112713 |
637 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3446642 rs781825644 |
637 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA128373705 rs981760111 |
638 | D>E | No |
ClinGen Ensembl |
|
|
CA361275337 rs1217002511 |
638 | D>G | No |
ClinGen TOPMed |
|
|
rs1581658412 CA361275370 |
639 | E>D | No |
ClinGen Ensembl |
|
|
rs1554122584 CA361275440 |
642 | A>D | No |
ClinGen gnomAD |
|
|
CA3446644 rs142727818 |
643 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA3446645 rs781899440 |
643 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA361275459 rs781899440 |
643 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA128373708 rs142727818 |
643 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
RCV000122560 CA232330 rs386352345 |
644 | R>C | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA361275481 rs1554122591 |
644 | R>P | No |
ClinGen gnomAD |
|
|
rs781861660 CA3446647 |
645 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA361275560 rs1554122593 |
646 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3446648 rs782496418 |
646 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361275570 rs782496418 |
646 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149374718 CA3446649 |
647 | L>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3446652 rs782677776 |
649 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs782366845 CA3446654 |
653 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA361275733 rs1554122600 |
653 | D>N | No |
ClinGen gnomAD |
|
|
CA361275754 rs782366845 |
653 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA3446655 rs781969076 |
654 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs200661884 CA128373730 |
654 | H>Q | No |
ClinGen gnomAD |
|
|
CA3446656 rs782083603 |
655 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA361275906 rs1554122607 |
657 | P>H | No |
ClinGen gnomAD |
|
|
rs1581658956 CA361275976 |
660 | T>P | No |
ClinGen Ensembl |
|
|
CA3446658 rs781920190 |
661 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3446659 rs17844261 COSM448731 |
662 | T>M | breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA361276064 rs1554122631 |
663 | A>D | No |
ClinGen gnomAD |
|
|
CA361276059 rs1554122630 |
663 | A>S | No |
ClinGen gnomAD |
|
| TCGA novel | 663 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 665 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361276146 rs781991461 |
666 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446662 rs782115337 |
667 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1554122639 CA361276188 |
668 | S>L | No |
ClinGen gnomAD |
|
|
rs782739618 CA3446663 |
670 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1485763647 CA361276206 |
670 | V>M | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 675 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782463768 CA3446665 |
675 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1212593321 CA361276372 |
676 | P>H | No |
ClinGen TOPMed |
|
|
rs148554584 CA3446666 |
676 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs781909871 CA3446667 |
677 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs782531842 CA3446668 |
678 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1554122661 CA3446670 |
679 | S>W | No |
ClinGen Ensembl |
|
|
rs1554122668 COSM589687 CA361276476 |
680 | S>C | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs782475199 CA361276464 |
680 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782475199 CA3446673 |
680 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1296238860 CA361276523 |
682 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1296238860 CA361276521 |
682 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA128373804 rs782357905 |
683 | S>F | No |
ClinGen Ensembl |
|
|
CA3446674 rs782577100 |
684 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3446676 rs782417260 |
687 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361276637 rs1581659688 |
687 | T>P | No |
ClinGen Ensembl |
|
|
CA361276653 rs782417260 |
687 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs564787047 CA3446678 |
689 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs782081759 CA3446681 |
692 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs781928066 CA3446683 |
694 | V>M | No |
ClinGen ExAC |
|
|
CA3446684 rs782172629 |
695 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs782799500 CA3446685 |
696 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361276910 rs1554122687 |
698 | V>G | No |
ClinGen gnomAD |
|
|
rs781851356 CA3446686 |
698 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs781851356 CA361276899 |
698 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA361276947 rs1312324296 |
700 | L>* | No |
ClinGen TOPMed |
|
|
rs1554122693 CA361276956 |
700 | L>F | No |
ClinGen gnomAD |
|
|
rs1375244170 CA361276994 |
702 | V>F | No |
ClinGen TOPMed |
|
|
rs145031481 CA3446690 |
703 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782683295 CA3446691 |
704 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA361277087 rs782516303 |
706 | A>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 706 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1421917213 CA361277083 |
706 | A>T | No |
ClinGen TOPMed |
|
|
CA3446693 rs782516303 |
706 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 707 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3446696 rs782343160 |
708 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA3446697 rs782343160 |
708 | S>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 709 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361277137 rs1190601909 |
709 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA361277193 rs1581660314 |
711 | L>W | No |
ClinGen Ensembl |
|
|
rs782428668 CA3446699 |
713 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA361277239 rs1485778021 |
715 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1485778021 CA361277242 |
715 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1481348508 CA361277319 |
719 | T>I | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 720 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3446704 rs782740317 |
722 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372773080 COSM1219569 CA361277364 |
722 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA361277426 rs1356277408 |
725 | A>S | No |
ClinGen TOPMed |
|
|
rs781949159 CA3446705 COSM1261257 |
725 | A>V | Variant assessed as Somatic; 0.0 impact. oesophagus [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3446706 rs782056345 |
727 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA361277461 rs1554122766 |
728 | T>A | No |
ClinGen gnomAD |
|
|
CA361277488 rs547051375 |
729 | E>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782777686 CA3446710 CA3446711 |
729 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA3446709 rs547051375 |
729 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs782489307 CA3446712 |
730 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446713 rs782603912 |
732 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554122787 CA361277550 |
732 | C>S | No |
ClinGen gnomAD |
|
|
CA3446715 rs781917643 |
734 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs781917643 CA128373925 |
734 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3446717 rs782279690 |
735 | G>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 735 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782612711 CA3446719 |
737 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA361277638 rs1554122792 |
737 | P>T | No |
ClinGen gnomAD |
|
|
CA3446720 rs1554122799 |
738 | T>P | No |
ClinGen Ensembl |
|
|
CA128373961 rs369771411 |
738 | T>R | No |
ClinGen Ensembl |
|
|
rs1554122804 CA361277674 |
739 | L>V | No |
ClinGen Ensembl |
|
|
CA361277731 rs1554122806 |
742 | S>C | No |
ClinGen gnomAD |
|
|
rs1554122806 CA361277733 |
742 | S>F | No |
ClinGen gnomAD |
|
|
rs782209415 COSM736318 CA128373968 CA3446722 |
743 | S>R | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA3446725 rs781912218 |
744 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA3446724 rs781912218 |
744 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1554122811 CA361277782 |
745 | V>L | No |
ClinGen gnomAD |
|
|
CA361277806 rs369373965 CA3446727 |
746 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361277807 rs369373965 |
746 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 748 | W>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361277924 rs1554122823 |
749 | S>L | No |
ClinGen gnomAD |
|
|
CA361277906 rs1194770937 |
749 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1554122826 CA361277929 |
750 | Y>N | No |
ClinGen gnomAD |
|
| TCGA novel | 751 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361278008 rs1214042918 |
751 | S>L | No |
ClinGen TOPMed |
|
|
rs1554122835 CA361278056 |
753 | Q>* | No |
ClinGen gnomAD |
|
|
rs372857774 CA3446733 |
753 | Q>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA3446734 rs781912049 |
754 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs782807269 CA3446735 |
755 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361278111 rs1283758442 |
755 | Q>L | No |
ClinGen TOPMed |
|
|
rs1337823109 CA361278128 |
756 | Q>K | No |
ClinGen TOPMed |
|
|
rs1581661706 CA361278149 |
757 | R>K | No |
ClinGen Ensembl |
|
|
CA361278199 rs1307758444 |
758 | V>A | No |
ClinGen TOPMed |
|
|
CA361278202 rs1307758444 |
758 | V>G | No |
ClinGen TOPMed |
|
|
rs781860611 CA3446738 |
758 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs781860611 CA3446737 |
758 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA3446740 rs782177204 |
759 | C>* | No |
ClinGen ExAC gnomAD |
|
|
rs2240694 CA361278213 |
759 | C>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs2240694 VAR_021875 CA3446739 |
759 | C>Y | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA3446742 rs782674659 |
761 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA128374009 rs372995948 |
762 | E>A | No |
ClinGen ESP TOPMed |
|
|
CA3446743 CA361278295 rs782257079 |
762 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1562194526 CA361278338 |
763 | G>E | No |
ClinGen Ensembl |
|
|
rs1562194564 CA361278354 |
764 | L>V | No |
ClinGen Ensembl |
|
|
rs140331962 CA3446745 |
765 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs782376383 CA3446744 |
765 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1581662033 CA361278397 |
766 | K>Q | No |
ClinGen Ensembl |
|
|
CA3446746 rs782087846 |
768 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs377026931 CA3446747 |
769 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361280253 rs1554122852 |
770 | M>T | No |
ClinGen gnomAD |
|
|
CA3446749 rs782173902 |
773 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA3446750 rs782792820 |
774 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782792820 CA361280303 |
774 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554122865 CA361280329 |
776 | L>P | No |
ClinGen gnomAD |
|
|
CA3446751 rs781877015 |
778 | P>A | No |
ClinGen ExAC |
|
|
rs560711675 CA128374571 |
778 | P>L | No |
ClinGen gnomAD |
|
|
CA361280349 rs560711675 |
778 | P>R | No |
ClinGen gnomAD |
|
|
CA361280355 rs1562194851 |
779 | C>G | No |
ClinGen Ensembl |
|
|
rs1554122870 CA361280366 |
780 | P>A | No |
ClinGen gnomAD |
|
|
rs782740421 CA3446753 |
781 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs782432564 CA3446756 CA3446755 |
782 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777744369 CA361280408 |
783 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777744369 CA3446758 |
783 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 783 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374412215 CA3446759 |
785 | R>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554122885 CA361280432 |
785 | R>S | No |
ClinGen gnomAD |
|
|
rs782622093 CA3446760 |
787 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA3446761 rs782224885 |
789 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554122889 CA361280495 |
790 | D>G | No |
ClinGen gnomAD |
|
|
CA128374614 rs898664223 |
791 | V>A | No |
ClinGen gnomAD |
|
|
CA3446762 rs782466651 |
792 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs1306203317 CA361280525 |
793 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA361280526 rs1306203317 |
793 | V>L | No |
ClinGen TOPMed |
|
|
rs782597617 CA3446763 |
794 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1321959847 CA361280568 |
797 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3446764 rs782182345 |
797 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3446765 rs782421319 |
798 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs376686641 CA3446766 |
798 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782073950 CA3454452 |
799 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA361259520 rs1490306705 |
799 | P>S | No |
ClinGen TOPMed |
|
|
rs374951627 CA3454453 |
800 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781913955 CA3454454 |
800 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA3454455 rs781913955 |
800 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs782109224 CA3454458 |
805 | D>H | No |
ClinGen ExAC |
|
|
COSM3696815 COSM3696819 COSM3696826 COSM3696817 CA3454459 COSM3696814 COSM3696822 COSM3696816 COSM3696828 COSM3696812 COSM3696820 rs782774245 COSM3696813 COSM3696823 COSM3696825 COSM3696821 COSM3696827 COSM3696818 COSM3696824 |
806 | W>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361259640 rs782774245 |
806 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA3454460 rs141879545 |
807 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454463 rs781815387 |
810 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138901709 CA3454464 |
811 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782686641 CA3454465 |
812 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1363421000 CA361259736 |
813 | R>I | No |
ClinGen TOPMed |
|
|
rs1586790986 CA361259751 |
814 | A>G | No |
ClinGen Ensembl |
|
|
CA3454466 rs782253140 |
815 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454467 rs782336746 |
816 | M>V | No |
ClinGen ExAC |
|
|
CA361259787 rs1554240128 |
817 | H>N | No |
ClinGen gnomAD |
|
|
rs149397164 CA3454468 |
818 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782426631 CA3454484 |
819 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782587733 CA3454485 |
819 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs782426631 CA361260538 |
819 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1181664726 CA361260559 |
820 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361260577 rs1554244276 |
821 | H>P | No |
ClinGen gnomAD |
|
|
COSM1062442 COSM1062448 COSM1062450 rs782273708 COSM1062445 COSM1062454 COSM1062455 COSM1062443 COSM1062452 COSM1062456 COSM1062457 COSM1062451 COSM1062453 COSM1062449 COSM1062447 CA3454486 COSM1062444 |
821 | H>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3454488 rs782634646 |
823 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454487 rs782419098 |
823 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs147537783 CA3454489 |
824 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs981642614 CA128362369 |
825 | A>T | No |
ClinGen Ensembl |
|
|
rs782347331 CA3454490 |
826 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260711 rs1468199443 |
827 | I>V | No |
ClinGen TOPMed |
|
|
rs555523473 CA3454493 |
829 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139355257 CA3454492 |
829 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782025005 CA3454494 |
831 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361260802 rs1278779763 |
832 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3454495 rs201991205 |
834 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454497 rs201572428 |
836 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3454496 rs782766562 |
836 | D>V | No |
ClinGen ExAC |
|
|
rs1554244431 CA361260933 |
838 | Q>R | No |
ClinGen gnomAD |
|
|
CA3454498 rs782094765 |
839 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454499 RCV000950135 rs79247475 |
840 | P>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA128362405 rs369053351 |
840 | P>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1554244455 CA361260996 |
841 | T>A | No |
ClinGen gnomAD |
|
|
CA3454501 rs782544627 |
842 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454502 rs577838197 |
844 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454504 rs781852534 |
844 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs781852534 CA3454503 |
844 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs782605920 CA3454505 |
844 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs199851685 CA3454506 |
846 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3454507 rs782437404 |
847 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs560422677 CA3454508 |
847 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs560422677 CA3454509 |
847 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA361261129 rs782437404 |
847 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs782179145 CA3454531 |
848 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3454532 rs782321757 |
851 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554262240 CA361268348 |
853 | E>G | No |
ClinGen gnomAD |
|
|
rs781996586 CA3454536 |
859 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1179266 rs782079089 COSM1179264 COSM1179272 COSM1179273 COSM1179269 COSM1179270 COSM1179277 COSM1179268 COSM1179263 COSM1179271 COSM1179278 COSM1179275 COSM1179276 COSM1179265 CA3454537 COSM1179267 COSM1179274 |
860 | A>V | lung prostate [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1588246273 CA361268557 |
862 | V>G | No |
ClinGen Ensembl |
|
|
CA3454540 rs782068657 |
862 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1563727066 CA361268679 |
866 | S>N | No |
ClinGen Ensembl |
|
|
COSM139598 COSM139601 COSM139604 COSM139606 COSM139609 COSM139603 COSM139600 COSM139611 COSM139608 rs1554262287 COSM139599 COSM139607 COSM139602 COSM139605 COSM139610 CA361268865 |
872 | G>E | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs900919931 CA128372514 |
872 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1554262289 CA361268920 |
874 | G>D | No |
ClinGen gnomAD |
|
|
CA3454542 rs575518914 |
876 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175529844 CA361268995 |
877 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3454543 rs782119637 |
879 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA3454546 rs552954748 |
880 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552954748 CA3454545 |
880 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs373683237 CA3454547 |
881 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1486746921 CA361269173 |
882 | G>S | No |
ClinGen TOPMed |
|
|
CA128372547 rs1057913 |
886 | D>A | No |
ClinGen Ensembl |
|
|
rs371269236 CA3454551 |
886 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454552 rs782334415 |
887 | K>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454553 rs782623559 |
890 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3454555 rs782328874 |
891 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3454556 rs200822345 |
892 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3454559 rs782009776 |
896 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142720081 CA361269729 |
896 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3454558 rs142720081 |
896 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782087059 CA3454560 |
897 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1289763016 CA361269834 |
899 | I>V | No |
ClinGen TOPMed |
|
|
rs760426957 CA3454562 |
900 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1166265 COSM1166271 COSM1166266 COSM1166268 COSM1166267 COSM1166273 COSM1166276 COSM1166277 COSM1166272 COSM1166264 COSM1166279 rs147351924 CA3454561 COSM1166275 COSM1166269 COSM1166278 COSM1166270 COSM1166274 |
900 | R>W | large_intestine haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA361269875 rs1554262408 |
901 | Q>K | No |
ClinGen gnomAD |
|
|
CA361269953 rs1554262420 |
903 | P>A | No |
ClinGen gnomAD |
|
|
CA361269962 rs1359138927 |
903 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1314860754 CA361269972 |
904 | T>A | No |
ClinGen TOPMed |
|
|
CA361270002 rs1554262437 |
905 | N>K | No |
ClinGen TOPMed |
|
|
CA3454564 rs148436868 |
906 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1554262456 CA361270119 |
908 | I>T | No |
ClinGen gnomAD |
|
|
rs781853535 CA3454565 |
908 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529364872 CA128372646 |
909 | D>E | No |
ClinGen Ensembl |
|
|
CA3454567 rs142570778 |
909 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA128372638 rs782057926 |
909 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3454568 rs781835321 |
910 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs782451974 CA3454569 |
913 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3454570 rs782578873 |
915 | T>I | No |
ClinGen ExAC |
|
|
rs782274123 CA3454571 |
916 | F>S | No |
ClinGen ExAC gnomAD |
|
|
COSM216699 COSM216705 CA3454573 COSM216710 rs782642898 COSM1158471 COSM216696 COSM216700 COSM216702 COSM216709 COSM216704 COSM216698 COSM216697 COSM216706 COSM216707 COSM216701 COSM216703 COSM216708 |
917 | G>S | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3454574 rs782270689 |
919 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs782270689 CA361270554 |
919 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1259591783 CA361270565 |
920 | E>Q | No |
ClinGen TOPMed |
|
|
CA361270593 rs1554262487 |
921 | E>D | No |
ClinGen gnomAD |
|
|
CA3454575 rs782348993 |
922 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs781972089 CA3454577 |
923 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1554262492 CA361270633 |
923 | K>R | No |
ClinGen gnomAD |
|
|
rs374660085 CA3454578 |
928 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361270828 rs1554262513 |
929 | K>R | No |
ClinGen gnomAD |
|
|
CA3454579 rs782413551 |
930 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782413551 CA361270853 |
930 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307653192 CA361270984 |
933 | K>N | No |
ClinGen TOPMed |
|
|
CA128372721 rs184181976 |
933 | K>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
rs1554262529 CA361271070 |
936 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs782776948 CA3454583 |
938 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3454584 rs781954349 |
941 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361271296 rs1295693430 |
942 | N>D | No |
ClinGen TOPMed |
|
|
rs1554262551 CA361271322 |
942 | N>K | No |
ClinGen gnomAD |
|
|
CA361271306 rs1415929182 |
942 | N>S | No |
ClinGen TOPMed |
|
|
CA128372734 rs958247947 |
943 | S>G | No |
ClinGen Ensembl |
|
|
CA128372735 rs17855798 |
943 | S>N | No |
ClinGen Ensembl |
|
|
COSM1434122 COSM1434119 CA3454585 COSM1434134 COSM1434133 COSM1434130 COSM1434131 COSM1434125 COSM1434126 COSM1434124 COSM1434127 COSM1434129 COSM1434121 COSM1434120 COSM1434123 rs199928168 COSM1434128 COSM1434132 |
944 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA361271405 rs1301104421 |
945 | T>A | No |
ClinGen TOPMed |
|
|
CA361271440 rs1554262572 |
946 | D>E | No |
ClinGen gnomAD |
|
|
CA361271462 rs1463725058 |
947 | N>Y | No |
ClinGen TOPMed |
No associated diseases with Q9Y5H8
11 regional properties for Q9Y5H8
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Cadherin-like | 28 - 133 | IPR002126-1 |
| domain | Cadherin-like | 134 - 242 | IPR002126-2 |
| domain | Cadherin-like | 242 - 350 | IPR002126-3 |
| domain | Cadherin-like | 351 - 565 | IPR002126-4 |
| domain | Cadherin-like | 581 - 678 | IPR002126-5 |
| domain | Cadherin, N-terminal | 30 - 111 | IPR013164 |
| conserved_site | Cadherin conserved site | 230 - 240 | IPR020894-1 |
| conserved_site | Cadherin conserved site | 338 - 348 | IPR020894-2 |
| conserved_site | Cadherin conserved site | 443 - 453 | IPR020894-3 |
| conserved_site | Cadherin conserved site | 553 - 563 | IPR020894-4 |
| domain | Cadherin, C-terminal catenin-binding domain | 800 - 933 | IPR031904 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium ion binding | Binding to a calcium ion (Ca2+). |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cell adhesion | The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
| homophilic cell adhesion via plasma membrane adhesion molecules | The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell. |
| nervous system development | The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. |
45 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q3SWX5 | CDH6 | Cadherin-6 | Bos taurus (Bovine) | PR |
| P79995 | CDH10 | Cadherin-10 | Gallus gallus (Chicken) | PR |
| Q8UVJ7 | CDHR1 | Cadherin-related family member 1 | Gallus gallus (Chicken) | PR |
| Q5DRC8 | PCDHB6 | Protocadherin beta-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE4 | PCDHA8 | Protocadherin alpha-8 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE6 | PCDHA6 | Protocadherin alpha-6 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRF0 | PCDHA2 | Protocadherin alpha-2 | Pan troglodytes (Chimpanzee) | PR |
| Q5DRE7 | PCDHA5 | Protocadherin alpha-5 | Pan troglodytes (Chimpanzee) | PR |
| Q9VJB6 | CadN2 | Putative neural-cadherin 2 | Drosophila melanogaster (Fruit fly) | PR |
| Q9ULB4 | CDH9 | Cadherin-9 | Homo sapiens (Human) | PR |
| P12830 | CDH1 | Cadherin-1 | Homo sapiens (Human) | PR |
| Q9H159 | CDH19 | Cadherin-19 | Homo sapiens (Human) | PR |
| Q9Y6N8 | CDH10 | Cadherin-10 | Homo sapiens (Human) | PR |
| P55285 | CDH6 | Cadherin-6 | Homo sapiens (Human) | PR |
| P19022 | CDH2 | Cadherin-2 | Homo sapiens (Human) | PR |
| Q6ZTQ4 | CDHR3 | Cadherin-related family member 3 | Homo sapiens (Human) | PR |
| Q9BZA8 | PCDH11Y | Protocadherin-11 Y-linked | Homo sapiens (Human) | PR |
| Q08174 | PCDH1 | Protocadherin-1 | Homo sapiens (Human) | PR |
| Q9HC56 | PCDH9 | Protocadherin-9 | Homo sapiens (Human) | PR |
| Q9P2E7 | PCDH10 | Protocadherin-10 | Homo sapiens (Human) | PR |
| Q9UN75 | PCDHA12 | Protocadherin alpha-12 | Homo sapiens (Human) | PR |
| Q9Y5I2 | PCDHA10 | Protocadherin alpha-10 | Homo sapiens (Human) | PR |
| Q9UN72 | PCDHA7 | Protocadherin alpha-7 | Homo sapiens (Human) | PR |
| Q9UN74 | PCDHA4 | Protocadherin alpha-4 | Homo sapiens (Human) | PR |
| Q9Y5I1 | PCDHA11 | Protocadherin alpha-11 | Homo sapiens (Human) | PR |
| Q9Y5H7 | PCDHA5 | Protocadherin alpha-5 | Homo sapiens (Human) | PR |
| Q9UN73 | PCDHA6 | Protocadherin alpha-6 | Homo sapiens (Human) | PR |
| Q9Y5H6 | PCDHA8 | Protocadherin alpha-8 | Homo sapiens (Human) | PR |
| Q9Y5I3 | PCDHA1 | Protocadherin alpha-1 | Homo sapiens (Human) | PR |
| Q9Y5H9 | PCDHA2 | Protocadherin alpha-2 | Homo sapiens (Human) | PR |
| Q9Y5H3 | PCDHGA10 | Protocadherin gamma-A10 | Homo sapiens (Human) | PR |
| O60330 | PCDHGA12 | Protocadherin gamma-A12 | Homo sapiens (Human) | PR |
| Q9Y5G4 | PCDHGA9 | Protocadherin gamma-A9 | Homo sapiens (Human) | PR |
| Q9Y5G0 | PCDHGB5 | Protocadherin gamma-B5 | Homo sapiens (Human) | PR |
| Q9Y5E3 | PCDHB6 | Protocadherin beta-6 | Homo sapiens (Human) | PR |
| Q9Y5F1 | PCDHB12 | Protocadherin beta-12 | Homo sapiens (Human) | PR |
| P09803 | Cdh1 | Cadherin-1 | Mus musculus (Mouse) | PR |
| P15116 | Cdh2 | Cadherin-2 | Mus musculus (Mouse) | PR |
| P70407 | Cdh9 | Cadherin-9 | Mus musculus (Mouse) | PR |
| P97326 | Cdh6 | Cadherin-6 | Mus musculus (Mouse) | PR |
| P70408 | Cdh10 | Cadherin-10 | Mus musculus (Mouse) | PR |
| Q8VHF2 | Cdhr5 | Cadherin-related family member 5 | Mus musculus (Mouse) | PR |
| P55280 | Cdh6 | Cadherin-6 | Rattus norvegicus (Rat) | PR |
| Q9Z1Y3 | Cdh2 | Cadherin-2 | Rattus norvegicus (Rat) | PR |
| Q767I8 | Pcdha4 | Protocadherin alpha-4 | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MLFSWREDPG | AQCLLLSLLL | LAASEVGSGQ | LHYSVSEEAK | HGTFVGRIAQ | DLGLELAELV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PRLFRVASKR | HGDLLEVNLQ | NGILFVNSRI | DREELCGRSA | ECSIHLEVIV | DRPLQVFHVE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VEVKDINDNA | PVFPMAVKNL | FISESRQPGS | RFSLEGASDA | DIGTNSLLTY | SLDSTEYFTL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DVKRNDEEIK | SLGLVLKKNL | NREDTPKHYL | LITAIDGGKP | ELTGTTQLKI | TVLDVNDNAP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| AFERTIYKVR | LLENAPNGTL | VVTVNATDLD | EGVNKDIAYS | FNTDMSADIL | SKFHLDPVNG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QISVKGNIDF | EESKSYEIQV | EATDKGNPPM | SDHCTVLLEI | VDINDNVPEL | VIQSLSLPVL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EDSPLSTVIA | LISVSDRDSG | VNGQVTCSLT | PHVPFKLVST | FKNYYSLVLD | SPLDRESVSA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YELVVTARDG | GSPSLWATAS | VSVEVADVND | NAPAFSQSEY | TVFVKENNPP | GCHIFTVSAR |
| 490 | 500 | 510 | 520 | 530 | 540 |
| DADAQENALV | SYSLVERRVG | ERALSSYVSV | HAESGKVYAL | QPLDHEELEL | LQFQVSARDA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GVPPLGSNVT | LQVFVLDEND | NAPALLMPRV | GGIGGAVSEL | VPRSVGAGHV | VAKVRAVDAD |
| 610 | 620 | 630 | 640 | 650 | 660 |
| SGYNAWLSYE | LQPGTGGARI | PFRVGLYTGE | ISTTRALDEV | DAPRHRLLVL | VKDHGEPSLT |
| 670 | 680 | 690 | 700 | 710 | 720 |
| ATATVLVSLV | ESGQAPKASS | QASAGATGPE | AALVDVNVYL | IVAICAVSSL | LVLTLLLYTA |
| 730 | 740 | 750 | 760 | 770 | 780 |
| LRCSAPPTEG | DCGPGKPTLV | CSSAVGSWSY | SQQRQQRVCS | GEGLPKTDLM | AFSPSLPPCP |
| 790 | 800 | 810 | 820 | 830 | 840 |
| ISRDREEKQD | VDVDLSAKPR | QPNPDWRYSA | SLRAGMHSSV | HLEEAGILRA | GPGGPDQQWP |
| 850 | 860 | 870 | 880 | 890 | 900 |
| TVSSATPEPE | AGEVSPPVGA | GVNSNSWTFK | YGPGNPKQSG | PGELPDKFII | PGSPAIISIR |
| 910 | 920 | 930 | 940 | ||
| QEPTNSQIDK | SDFITFGKKE | ETKKKKKKKK | GNKTQEKKEK | GNSTTDNSDQ |