Q9UP38
Gene name |
FZD1 |
Protein name |
Frizzled-1 |
Names |
Fz-1, hFz1, FzE1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:8321 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
3 structures for Q9UP38
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 8J9N | EM | 350 A | B | 69-647 | PDB |
| 8J9O | EM | 340 A | PDB | ||
| AF-Q9UP38-F1 | Predicted | AlphaFoldDB |
527 variants for Q9UP38
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1303955165 CA368111473 |
2 | A>S | No |
ClinGen TOPMed |
|
|
rs1303955165 CA368111471 |
2 | A>T | No |
ClinGen TOPMed |
|
|
CA368111475 rs1467211914 |
2 | A>V | No |
ClinGen gnomAD |
|
|
CA162820337 rs909653277 |
6 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
rs909653277 CA368111504 |
6 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs938351976 CA368111513 |
8 | K>* | No |
ClinGen gnomAD |
|
|
rs938351976 CA162820338 |
8 | K>E | No |
ClinGen gnomAD |
|
|
rs1056767061 CA162820339 |
8 | K>T | No |
ClinGen Ensembl |
|
|
rs750107627 CA4335040 |
10 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762530466 CA368111533 |
11 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762530466 CA4335041 |
11 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1014467401 CA368111539 |
12 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1014467401 CA162820341 |
12 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA368111540 rs1441813156 |
13 | A>T | No |
ClinGen gnomAD |
|
|
rs765901117 CA4335042 |
14 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368111551 rs1446610778 |
15 | G>S | No |
ClinGen gnomAD |
|
|
rs755525834 CA4335044 |
16 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA368111559 rs1194238539 |
16 | G>S | No |
ClinGen TOPMed |
|
|
CA368111566 rs1204031730 |
17 | A>G | No |
ClinGen TOPMed |
|
|
rs1420406058 CA368111562 |
17 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA368111569 rs1257363545 |
18 | S>G | No |
ClinGen TOPMed |
|
|
rs1222098993 CA368111575 |
18 | S>R | No |
ClinGen TOPMed |
|
|
CA162820342 rs887932162 |
21 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
CA4335046 rs753069708 |
22 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1342646410 CA368111610 |
23 | A>V | No |
ClinGen gnomAD |
|
|
CA162820343 rs1002096196 |
24 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA368111611 rs1444030438 |
24 | G>R | No |
ClinGen gnomAD |
|
|
rs1027439486 CA162820344 |
25 | A>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 25 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1027439486 CA368111619 |
25 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA368111626 rs1396651918 |
26 | L>R | No |
ClinGen TOPMed |
|
|
CA368111634 rs1395872839 |
28 | A>T | No |
ClinGen gnomAD |
|
|
rs1428274719 CA368111642 |
29 | R>P | No |
ClinGen TOPMed |
|
|
CA368111649 rs1257931729 |
31 | A>T | No |
ClinGen gnomAD |
|
|
rs1171306492 CA368111654 |
31 | A>V | No |
ClinGen TOPMed |
|
|
CA4335051 rs779185373 |
33 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757506473 CA4335050 |
33 | E>K | No |
ClinGen ExAC |
|
|
CA368111672 rs1584242938 |
34 | G>A | No |
ClinGen Ensembl |
|
|
rs745913961 CA4335052 |
34 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA368111683 CA368111682 rs1376049227 |
36 | G>R | No |
ClinGen gnomAD |
|
|
rs1257860494 CA368111696 |
38 | A>T | No |
ClinGen TOPMed |
|
|
rs1465925703 CA368111705 |
39 | G>D | No |
ClinGen gnomAD |
|
|
CA368111702 rs1461146482 |
39 | G>S | No |
ClinGen TOPMed |
|
|
rs1464374630 CA368111717 |
41 | R>H | No |
ClinGen gnomAD |
|
|
CA368111720 rs1200891699 |
42 | R>C | No |
ClinGen TOPMed |
|
|
rs1331148633 CA368111723 |
42 | R>H | No |
ClinGen gnomAD |
|
|
rs965671131 CA162820347 |
43 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs997958051 CA162820348 |
43 | R>H | No |
ClinGen TOPMed |
|
|
CA4335054 rs776620932 |
44 | P>R | No |
ClinGen ExAC TOPMed |
|
|
rs1342295604 CA368111732 |
44 | P>S | No |
ClinGen TOPMed |
|
|
CA368111753 rs1401300758 |
47 | D>E | No |
ClinGen TOPMed |
|
|
rs1452108003 CA368111752 |
47 | D>G | No |
ClinGen TOPMed |
|
|
CA4335055 rs554909047 |
48 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4335056 rs554909047 |
48 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1332682566 CA368111763 |
49 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1472847568 CA368111778 |
52 | A>P | No |
ClinGen TOPMed |
|
|
rs1257712065 CA368111785 |
53 | R>H | No |
ClinGen gnomAD |
|
|
rs1258542871 CA368111801 |
56 | L>M | No |
ClinGen gnomAD |
|
|
CA368111807 rs1458371265 |
57 | L>V | No |
ClinGen gnomAD |
|
|
CA368111813 rs1179180454 |
58 | L>P | No |
ClinGen gnomAD |
|
|
CA4335058 rs772947349 |
59 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA162820351 rs772947349 |
59 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs979669443 CA162820352 |
61 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1199739561 CA368111831 |
61 | L>P | No |
ClinGen gnomAD |
|
|
rs979669443 CA368111829 |
61 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs866903038 CA162820353 |
62 | L>M | No |
ClinGen Ensembl |
|
|
rs142085794 CA162820354 |
64 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs142085794 CA4335059 |
64 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368111866 rs1358572204 |
68 | L>V | No |
ClinGen TOPMed |
|
|
CA162820356 rs891811319 |
69 | G>A | No |
ClinGen TOPMed |
|
|
rs1438208600 CA368111877 |
70 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
CA162820357 rs977241948 |
71 | R>P | No |
ClinGen gnomAD |
|
|
rs574691354 CA4335060 |
71 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1311686668 CA368111884 |
72 | A>T | No |
ClinGen TOPMed |
|
|
CA4335061 rs557713242 |
74 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368111902 rs557713242 |
74 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1028239110 CA162820360 |
75 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1389326253 CA368111925 |
78 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA162820362 rs368968709 |
80 | G>D | No |
ClinGen Ensembl |
|
|
rs767964823 CA4335064 |
80 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368111945 rs1302817813 |
81 | Q>H | No |
ClinGen gnomAD |
|
|
rs1004645902 CA162820363 |
83 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA368111957 rs1278536573 |
84 | G>R | No |
ClinGen gnomAD |
|
|
rs1014656110 CA162820364 |
85 | P>L | No |
ClinGen TOPMed |
|
|
rs756511034 CA4335066 |
86 | G>R | No |
ClinGen ExAC |
|
|
rs754232711 CA4335070 |
89 | P>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 92 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4335077 rs529145118 |
94 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs563575931 CA4335076 |
94 | Q>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368112027 rs1193581660 |
95 | Q>* | No |
ClinGen gnomAD |
|
|
CA4335078 rs779934443 |
95 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA4335080 rs769565425 |
96 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1403826346 CA368112045 |
97 | Q>H | No |
ClinGen TOPMed |
|
|
rs1367499438 CA368112054 |
98 | S>R | No |
ClinGen gnomAD |
|
|
CA368112057 rs1360544877 |
99 | G>E | No |
ClinGen TOPMed |
|
|
rs773037088 CA4335081 |
99 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA4335082 rs749049302 |
102 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs770635483 CA4335083 |
103 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs375051170 CA4335084 |
103 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA368112089 rs1311829566 |
104 | G>S | No |
ClinGen gnomAD |
|
|
rs1406776578 CA368112099 |
105 | E>D | No |
ClinGen TOPMed |
|
|
rs959977879 CA162820367 |
105 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA162820366 rs959977879 |
105 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs759052167 CA4335085 |
106 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1487368309 CA368112102 |
106 | R>Q | No |
ClinGen gnomAD |
|
|
rs759052167 CA368112101 |
106 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368112109 rs767058121 |
107 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767058121 CA4335086 |
107 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335087 rs774814084 |
108 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs1487159468 CA368112111 |
108 | I>V | No |
ClinGen gnomAD |
|
|
CA162820368 rs992945609 |
109 | S>T | No |
ClinGen Ensembl |
|
|
CA4335091 rs754322513 |
110 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs754322513 CA4335090 |
110 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs377459455 CA162820370 |
111 | P>L | No |
ClinGen Ensembl |
|
|
CA368112139 rs1446684619 |
113 | H>D | No |
ClinGen TOPMed |
|
|
COSM1452731 rs751566731 CA4335096 |
114 | G>D | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs988874488 CA162820371 |
115 | Y>F | No |
ClinGen TOPMed |
|
|
CA368112162 rs1584243208 |
116 | C>S | No |
ClinGen Ensembl |
|
|
CA162820372 rs942183361 |
118 | P>L | No |
ClinGen Ensembl |
|
| TCGA novel | 118 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749138157 CA4335099 |
119 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs777680747 CA4335098 |
119 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA368112201 rs1453604982 |
122 | P>L | No |
ClinGen gnomAD |
|
|
rs1453604982 CA368112200 |
122 | P>Q | No |
ClinGen gnomAD |
|
|
CA4335102 rs149357966 |
128 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA368112256 rs1344281621 |
130 | N>K | No |
ClinGen TOPMed |
|
|
rs1319234441 CA368112254 |
130 | N>S | No |
ClinGen gnomAD |
|
|
rs898110856 CA162820374 |
131 | Q>H | No |
ClinGen Ensembl |
|
|
CA368112277 rs1255701930 |
133 | I>M | No |
ClinGen gnomAD |
|
|
CA368112275 rs1208654788 |
133 | I>T | No |
ClinGen gnomAD |
|
|
CA4335104 rs775107631 |
137 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs769346857 CA4335106 |
139 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA368112322 rs1427554766 |
140 | H>Q | No |
ClinGen TOPMed |
|
|
CA368112328 rs1176154961 |
141 | T>M | No |
ClinGen TOPMed |
|
|
rs777293881 CA4335107 |
142 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368112396 rs1470820699 |
151 | H>P | No |
ClinGen gnomAD |
|
|
rs1238287774 CA368112409 |
153 | F>V | No |
ClinGen TOPMed |
|
|
CA4335112 rs766475224 |
155 | P>L | No |
ClinGen ExAC |
|
|
rs755035659 CA4335114 |
159 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA368112463 rs1563007664 |
161 | C>Y | No |
ClinGen Ensembl |
|
|
CA368112472 rs1212441651 |
162 | S>F | No |
ClinGen TOPMed |
|
|
rs745620349 CA4335119 |
166 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs745620349 CA368112499 |
166 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA162820375 rs771826054 |
167 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368112504 rs1563007675 |
167 | F>V | No |
ClinGen Ensembl |
|
|
CA368112520 rs1324941364 |
169 | L>P | No |
ClinGen gnomAD |
|
|
CA4335122 rs746616682 |
174 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs1456999721 CA368112562 |
175 | P>L | No |
ClinGen gnomAD |
|
|
CA162820376 rs937596409 |
176 | V>A | No |
ClinGen TOPMed |
|
|
CA4335125 rs762437358 |
177 | C>G | No |
ClinGen ExAC gnomAD |
|
|
CA162820377 rs1052225120 |
179 | V>A | No |
ClinGen Ensembl |
|
|
CA4335127 rs773662622 |
179 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA162820378 rs541996570 |
183 | A>E | No |
ClinGen Ensembl |
|
|
CA162820379 rs1021665247 |
187 | C>G | No |
ClinGen Ensembl |
|
|
CA368112638 rs1466437511 |
188 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs757226244 CA4335134 |
188 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335136 rs757226244 |
188 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757226244 CA4335135 |
188 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA162820380 rs200651234 |
189 | S>P | No |
ClinGen gnomAD |
|
|
CA368112646 rs1274652473 |
190 | L>Q | No |
ClinGen gnomAD |
|
|
CA368112657 rs1220181607 |
192 | E>K | No |
ClinGen gnomAD |
|
|
rs1220181607 CA368112658 |
192 | E>Q | No |
ClinGen gnomAD |
|
|
rs746687511 CA4335140 |
193 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs780894315 CA4335141 |
193 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs746687511 CA4335139 |
193 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1185499359 CA368112670 |
194 | A>S | No |
ClinGen TOPMed |
|
|
rs770493888 CA4335143 |
194 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA368112683 rs1421872447 |
196 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1407256117 CA368112715 |
201 | L>I | No |
ClinGen gnomAD |
|
|
rs1340503008 CA368112723 |
202 | M>V | No |
ClinGen gnomAD |
|
|
rs148076270 CA368112737 |
203 | N>K | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs757876150 CA4335147 COSM4162494 |
205 | F>L | thyroid [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs759776876 CA4335148 |
208 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1227396990 CA368112769 |
208 | Q>P | No |
ClinGen gnomAD |
|
|
CA368112771 rs1227396990 |
208 | Q>R | No |
ClinGen gnomAD |
|
|
CA368112801 rs1361012717 |
212 | T>M | No |
ClinGen gnomAD |
|
|
CA368112797 rs1327013250 |
212 | T>P | No |
ClinGen gnomAD |
|
|
rs1262354665 CA368112813 |
214 | K>T | No |
ClinGen gnomAD |
|
|
rs375615564 CA162820385 |
216 | E>G | No |
ClinGen ESP TOPMed |
|
| TCGA novel | 216 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368112833 rs1447552283 |
217 | K>E | No |
ClinGen gnomAD |
|
|
CA162820386 rs202087736 |
218 | F>L | No |
ClinGen Ensembl |
|
|
CA4335152 rs764174904 |
219 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA368112859 rs1380171458 |
221 | H>Y | No |
ClinGen TOPMed |
|
|
CA368112872 rs1471896225 |
222 | G>V | No |
ClinGen gnomAD |
|
|
rs953040877 CA162820387 |
225 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1426604246 CA368112893 |
226 | L>V | No |
ClinGen gnomAD |
|
|
CA4335153 rs369203224 |
230 | Q>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs758313232 CA4335154 |
232 | T>K | No |
ClinGen ExAC gnomAD |
|
|
rs758313232 CA368112936 |
232 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs1315337038 CA368112968 |
237 | T>N | No |
ClinGen gnomAD |
|
|
CA4335158 rs780990701 |
239 | T>M | No |
ClinGen ExAC gnomAD |
|
|
CA4335159 rs373279227 |
240 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs992747140 CA162820388 |
243 | L>P | No |
ClinGen Ensembl |
|
|
rs1441658373 CA368112999 |
243 | L>V | No |
ClinGen gnomAD |
|
|
CA368113008 rs1184026542 |
244 | P>L | No |
ClinGen gnomAD |
|
|
rs771421343 CA4335163 |
247 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs377303160 CA162820389 |
247 | W>R | No |
ClinGen ESP gnomAD |
|
|
CA368113037 rs1384880200 |
248 | T>I | No |
ClinGen TOPMed |
|
|
CA162820390 rs956567871 |
249 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA368113049 rs1400451046 |
250 | N>S | No |
ClinGen gnomAD |
|
|
CA4335166 rs772338017 |
252 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772338017 CA368113060 |
252 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335167 rs775700785 |
252 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA4335170 rs776721357 |
254 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA4335169 rs768647155 |
254 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368113081 rs1480296118 |
255 | G>D | No |
ClinGen TOPMed |
|
|
CA368113078 rs1335868430 |
255 | G>S | No |
ClinGen gnomAD |
|
|
rs987926317 CA162820392 |
256 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA4335171 rs762843825 |
257 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs879037012 CA162820395 |
258 | H>D | No |
ClinGen Ensembl |
|
|
CA4335172 rs766305637 |
259 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759395222 CA4335174 |
261 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368113112 rs1484574228 |
261 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1484574228 CA368113111 |
261 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA162820396 rs759395222 |
261 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368113116 rs1196989236 |
262 | F>L | No |
ClinGen gnomAD |
|
|
rs1305449013 CA368113128 |
263 | P>L | No |
ClinGen TOPMed |
|
|
CA4335180 rs753366851 |
264 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA368113132 rs753366851 |
264 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA4335182 rs199856015 |
265 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4335181 rs199856015 |
265 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 266 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4335185 rs772427888 |
267 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1408766136 CA368113145 |
267 | G>R | No |
ClinGen gnomAD |
|
|
rs747214552 CA4335187 |
269 | S>W | No |
ClinGen ExAC gnomAD |
|
|
CA4335188 rs768896364 |
271 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA368113172 rs1156717624 |
272 | G>S | No |
ClinGen TOPMed |
|
|
rs1393609613 CA368113179 |
273 | K>E | No |
ClinGen gnomAD |
|
|
rs1418244473 CA368113181 |
273 | K>T | No |
ClinGen TOPMed |
|
|
rs940876191 CA162820400 |
275 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA368113195 rs1429929419 |
275 | S>P | No |
ClinGen TOPMed |
|
|
CA368113203 rs1489639706 |
276 | C>F | No |
ClinGen TOPMed |
|
|
rs1284885739 CA368113206 |
276 | C>W | No |
ClinGen gnomAD |
|
|
rs770834506 CA4335191 |
278 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1454134426 CA368113215 |
278 | R>H | No |
ClinGen gnomAD |
|
|
CA4335193 rs565335389 |
279 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4335192 rs565335389 |
279 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368113224 rs1205194443 |
280 | L>F | No |
ClinGen TOPMed |
|
|
rs1197620879 CA368113229 |
281 | K>E | No |
ClinGen gnomAD |
|
|
CA4335194 rs767453970 |
281 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs752492991 CA4335195 |
282 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA4335196 rs534451306 |
284 | S>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4335197 rs763772148 |
287 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1486672564 CA368113270 |
287 | N>K | No |
ClinGen TOPMed |
|
|
rs1170243185 CA368113268 |
287 | N>S | No |
ClinGen gnomAD |
|
|
rs368609459 CA4335198 |
288 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1373286616 CA368113274 |
288 | Y>H | No |
ClinGen gnomAD |
|
|
CA4335200 rs778327398 |
289 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368113285 rs1563007955 |
289 | H>Q | No |
ClinGen Ensembl |
|
|
CA368113279 rs778327398 |
289 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1036532382 CA162820401 |
290 | F>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 291 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758851020 CA4335202 |
292 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA162820402 rs56170585 |
297 | G>S | No |
ClinGen Ensembl |
|
|
rs904656298 CA162820403 |
298 | A>S | No |
ClinGen Ensembl |
|
|
CA162820404 rs901971943 |
298 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA368113370 rs768823215 |
302 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335206 rs768823215 |
302 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335207 rs781467339 |
303 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368113382 rs1288456169 |
304 | K>N | No |
ClinGen TOPMed |
|
|
rs1223388464 CA368113394 |
306 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368113407 rs1487632879 |
308 | L>H | No |
ClinGen gnomAD |
|
|
rs998933986 CA162820405 |
309 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA4335211 rs773388012 |
309 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA368113410 rs998933986 |
309 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1162294582 CA368113420 |
310 | Y>S | No |
ClinGen gnomAD |
|
|
CA368113441 rs1428494939 |
313 | P>S | No |
ClinGen TOPMed |
|
|
rs1164977135 CA368113447 |
314 | E>K | No |
ClinGen gnomAD |
|
|
CA368113449 rs1358536884 |
314 | E>V | No |
ClinGen gnomAD |
|
|
CA162820409 rs959913632 |
316 | L>M | No |
ClinGen gnomAD |
|
|
CA162820410 rs1014480836 |
316 | L>R | No |
ClinGen Ensembl |
|
|
CA368113461 rs959913632 |
316 | L>V | No |
ClinGen gnomAD |
|
|
rs367552951 CA4335216 |
317 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4335215 rs367552951 |
317 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs367552951 CA368113464 |
317 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368113481 rs1584243817 |
319 | S>L | No |
ClinGen Ensembl |
|
|
CA4335217 rs776348766 |
321 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA4335219 rs545945483 |
323 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335220 rs749909829 |
325 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA368113535 rs1215711547 |
328 | V>M | No |
ClinGen gnomAD |
|
| TCGA novel | 330 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758940744 CA4335221 |
331 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs766862839 CA4335222 |
332 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1242108671 CA368113568 |
333 | S>A | No |
ClinGen gnomAD |
|
|
CA4335223 rs751929647 |
333 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1377959136 CA368113592 |
337 | T>A | No |
ClinGen gnomAD |
|
|
CA162820415 rs78712424 |
342 | L>M | No |
ClinGen TOPMed |
|
|
VAR_049290 rs3750146 CA4335227 |
343 | V>M | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs774088837 CA162820416 |
344 | D>N | No |
ClinGen Ensembl |
|
|
rs1335922942 CA368113640 |
345 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA368113648 rs1324697796 |
346 | R>G | No |
ClinGen TOPMed |
|
|
rs1563008067 CA368113665 |
348 | F>L | No |
ClinGen Ensembl |
|
|
rs1453673890 CA368113659 |
348 | F>L | No |
ClinGen gnomAD |
|
|
CA368113714 rs1371319481 |
355 | I>M | No |
ClinGen gnomAD |
|
|
CA162820417 rs761382740 |
356 | I>F | No |
ClinGen Ensembl |
|
|
rs749347940 CA4335230 COSM453537 |
357 | F>I | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs139681941 CA368113727 |
357 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749347940 CA368113721 |
357 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374891047 CA4335232 |
358 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1262969470 CA368113738 |
359 | S>C | No |
ClinGen gnomAD |
|
|
CA4335233 rs746854638 |
360 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs768525969 CA4335234 |
362 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA368113761 rs1251690734 |
363 | T>A | No |
ClinGen gnomAD |
|
|
rs776239506 CA368113764 |
363 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368113763 rs776239506 |
363 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335235 rs776239506 |
363 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335236 rs761499766 |
364 | A>V | No |
ClinGen ExAC |
|
|
rs556841355 CA4335237 |
367 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4335238 rs772772421 |
368 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1177318264 CA368113787 |
368 | A>T | No |
ClinGen gnomAD |
|
|
rs772772421 CA368113791 |
368 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA368113800 rs1175373250 |
370 | I>L | No |
ClinGen gnomAD |
|
|
rs1429742768 CA368113812 |
371 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 372 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA162820419 rs752115856 |
373 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752115856 CA4335241 |
373 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335242 rs755402187 |
375 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs922319384 CA162820420 |
375 | L>Q | No |
ClinGen Ensembl |
|
|
CA4335243 rs143614174 |
377 | D>N | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1584243968 CA368113859 |
379 | V>G | No |
ClinGen Ensembl |
|
|
CA368113854 rs1376149944 |
379 | V>M | No |
ClinGen gnomAD |
|
|
CA4335245 rs542894604 |
383 | D>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA368113882 rs1222231459 |
383 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA4335246 rs778137101 |
384 | K>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 388 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4335249 rs778816712 |
390 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs746987223 CA4335250 |
390 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368113938 rs1487427379 |
391 | R>G | No |
ClinGen gnomAD |
|
|
CA4335251 rs768453043 |
392 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs781079161 CA4335252 |
394 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA368113957 rs1481281808 |
394 | A>V | No |
ClinGen gnomAD |
|
|
rs1338011696 CA368113978 |
397 | T>I | No |
ClinGen TOPMed |
|
|
rs1250889976 CA368114021 |
403 | T>S | No |
ClinGen TOPMed |
|
|
CA4335254 rs747929584 |
404 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368114031 rs1361919859 |
405 | L>V | No |
ClinGen TOPMed |
|
|
CA4335257 rs762530569 |
408 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA4335259 rs559829750 |
409 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4335260 rs528481255 |
409 | L>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4335258 rs559829750 |
409 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs767882639 CA4335262 |
410 | Y>F | No |
ClinGen ExAC |
|
|
rs1338283514 CA368114091 |
413 | S>R | No |
ClinGen gnomAD |
|
|
CA4335265 rs201361207 |
413 | S>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1274449796 CA368114119 |
417 | S>Y | No |
ClinGen gnomAD |
|
|
rs1158451057 CA368114132 |
419 | W>* | No |
ClinGen gnomAD |
|
| TCGA novel | 419 | W>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754144425 CA368114159 |
422 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA368114156 rs1166848848 |
422 | I>N | No |
ClinGen TOPMed |
|
| TCGA novel | 422 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779097158 CA368114161 |
423 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 424 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 424 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1563008179 CA368114169 |
424 | S>W | No |
ClinGen Ensembl |
|
|
CA368114210 rs1269473134 |
430 | A>E | No |
ClinGen gnomAD |
|
|
rs1490838876 CA368114215 |
431 | A>G | No |
ClinGen gnomAD |
|
|
rs1233884873 CA368114231 |
433 | M>I | No |
ClinGen TOPMed |
|
|
CA368114227 rs1444400261 |
433 | M>T | No |
ClinGen TOPMed |
|
|
CA368114246 rs1563008191 |
435 | W>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1584244079 CA368114241 |
435 | W>G | No |
ClinGen Ensembl |
|
|
CA368114249 rs1323741534 |
436 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1241320016 CA368114255 |
437 | H>N | No |
ClinGen gnomAD |
|
|
rs1436630593 CA368114279 |
440 | I>F | No |
ClinGen TOPMed |
|
|
CA368114290 rs1475167632 |
441 | E>D | No |
ClinGen gnomAD |
|
|
rs780974515 CA4335271 |
442 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1187357215 CA368114292 |
442 | A>T | No |
ClinGen gnomAD |
|
|
rs934629505 CA162820425 |
444 | S>L | No |
ClinGen Ensembl |
|
|
CA368114337 rs1584244112 |
448 | H>P | No |
ClinGen Ensembl |
|
|
CA368114355 rs1361623397 |
451 | A>S | No |
ClinGen TOPMed |
|
|
CA4335274 rs777508938 |
451 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA162820426 rs371877365 |
453 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4335275 rs371877365 |
453 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA162820427 rs200235602 |
456 | A>G | No |
ClinGen Ensembl |
|
|
CA368114389 rs1326242104 |
457 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA162820428 rs895851383 |
459 | T>I | No |
ClinGen Ensembl |
|
|
rs1014097946 CA162820429 |
464 | A>S | No |
ClinGen Ensembl |
|
|
rs772694278 CA4335279 |
467 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs776155751 CA4335281 |
469 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs565403094 CA4335282 |
470 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA162820431 rs371579888 |
471 | D>H | No |
ClinGen gnomAD |
|
|
CA162820430 rs371579888 |
471 | D>N | No |
ClinGen gnomAD |
|
|
CA368114474 rs371579888 |
471 | D>Y | No |
ClinGen gnomAD |
|
|
CA4335284 rs762131713 |
472 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs750570517 CA4335287 |
476 | V>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 477 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368114539 rs1446935223 |
481 | L>F | No |
ClinGen gnomAD |
|
|
CA368114541 rs1563008260 |
481 | L>P | No |
ClinGen Ensembl |
|
|
CA4335289 rs139621623 |
482 | N>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA4335291 rs755998616 |
483 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA368114557 rs1240879246 |
484 | V>M | No |
ClinGen TOPMed |
|
|
rs777596824 CA4335292 |
485 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs749053362 CA4335293 |
486 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA368114570 rs749053362 |
486 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1563008272 CA368114582 |
488 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA368114599 rs1315053320 |
490 | F>L | No |
ClinGen gnomAD |
|
|
rs1236733468 CA368114607 |
492 | L>V | No |
ClinGen gnomAD |
|
|
rs1333940133 CA368114616 |
493 | A>V | No |
ClinGen TOPMed |
|
|
CA4335298 rs771512876 |
495 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA4335299 rs114840294 |
497 | V>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200075522 CA4335301 |
500 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM602862 CA162820433 rs368484423 |
502 | G>C | lung [Cosmic] | No |
ClinGen cosmic curated ESP gnomAD |
|
rs1230940676 CA368114670 |
502 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368114668 COSM1568815 rs368484423 |
502 | G>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP NCI-TCGA gnomAD |
|
rs1271818016 CA368114675 COSM1207704 |
503 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs762068983 CA4335303 |
503 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1470830128 CA368114693 |
506 | L>V | No |
ClinGen gnomAD |
|
|
rs763198469 CA4335306 |
507 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766472938 CA4335307 |
508 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs972769168 CA368114720 |
511 | V>L | No |
ClinGen TOPMed |
|
|
CA162820436 rs972769168 |
511 | V>M | No |
ClinGen TOPMed |
|
|
CA368114732 rs1222734623 |
513 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA4335312 rs757017279 |
514 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA368114746 rs1281098311 |
515 | R>C | No |
ClinGen gnomAD |
|
|
CA4335313 rs778704573 COSM1755408 |
515 | R>H | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1263959327 CA368114755 |
516 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA368114750 rs1223946909 |
516 | I>V | No |
ClinGen gnomAD |
|
|
COSM158741 rs1347489084 CA368114761 |
517 | R>H | Variant assessed as Somatic; 0.0 impact. haematopoietic_and_lymphoid_tissue [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs892096663 CA162820437 |
519 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA4335315 rs377524599 |
520 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1447838105 CA368114795 |
522 | H>L | No |
ClinGen TOPMed |
|
|
CA4335317 rs746509834 |
524 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769342553 CA4335318 |
526 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA368114823 rs1177650649 |
526 | K>N | No |
ClinGen gnomAD |
|
|
rs1348199807 CA368114829 |
527 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1009450887 CA368114831 |
528 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1009450887 CA368114830 |
528 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1009450887 CA162820438 |
528 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1166739615 CA368114834 |
528 | E>V | No |
ClinGen gnomAD |
|
|
CA4335322 rs145464476 |
534 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763138579 CA368114897 |
537 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763138579 CA4335323 |
537 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335324 rs766560413 |
541 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs759599050 CA368114926 |
542 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA4335326 rs759599050 |
542 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA162820440 rs564163822 |
543 | L>V | No |
ClinGen gnomAD |
|
|
rs1473605714 CA368114940 |
544 | Y>* | No |
ClinGen gnomAD |
|
|
CA4335328 rs767529276 |
544 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
CA368114944 rs1207442789 |
545 | T>A | No |
ClinGen gnomAD |
|
|
CA368114946 rs1290177855 |
545 | T>S | No |
ClinGen gnomAD |
|
|
CA368114949 rs1200527235 |
546 | V>L | No |
ClinGen gnomAD |
|
|
CA368114960 rs1563008375 |
548 | A>T | No |
ClinGen Ensembl |
|
|
CA4335329 rs753725473 |
550 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA162820442 rs1002028473 |
551 | V>I | No |
ClinGen TOPMed |
|
|
CA4335330 rs757168229 |
553 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs978998704 CA162820443 |
553 | A>V | No |
ClinGen Ensembl |
|
|
CA4335332 rs781169512 |
555 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA4335331 rs764988853 |
555 | Y>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 556 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs202129840 CA4335333 |
556 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1584244378 CA368115028 |
558 | E>V | No |
ClinGen Ensembl |
|
|
rs139043437 CA4335336 |
562 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368115054 rs1380692271 |
562 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368115059 rs1230692030 |
563 | D>H | No |
ClinGen gnomAD |
|
|
CA368115067 rs1359270698 |
564 | Q>* | No |
ClinGen gnomAD |
|
| TCGA novel | 565 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs147921120 CA4335337 |
567 | R>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs147921120 CA368115091 |
567 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs984834944 CA162820445 |
567 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs367770320 CA4335338 |
568 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1204961180 CA368115131 |
573 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs770315530 CA4335339 |
573 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 575 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4335340 rs370079514 |
576 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368115161 rs1267331657 |
577 | Y>D | No |
ClinGen TOPMed |
|
|
CA4335342 rs771201635 |
579 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA4335341 rs749662690 |
579 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 580 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368115181 rs1325637188 |
580 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs772172455 CA4335345 |
582 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335346 rs775615498 |
583 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs1405929513 CA368115200 |
583 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs141366978 CA4335348 |
584 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 585 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200835205 CA4335351 |
586 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752224375 CA4335355 |
588 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4335357 rs778330881 |
589 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA4335358 rs143330366 |
590 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4335359 rs143330366 |
590 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 590 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4335360 rs779211016 |
591 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368115256 rs1584244478 |
593 | H>P | No |
ClinGen Ensembl |
|
|
rs746136687 CA4335361 |
593 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA368115262 rs772250118 |
594 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA4335362 rs772250118 |
594 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA4335366 rs773202092 |
595 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335364 rs760794294 |
595 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA4335365 rs760794294 |
595 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1584244491 CA368115269 |
596 | M>L | No |
ClinGen Ensembl |
|
|
rs1584244491 CA368115270 |
596 | M>V | No |
ClinGen Ensembl |
|
|
CA368115280 rs1159490971 |
597 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA368115291 rs1413947382 |
598 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA368115289 rs1413947382 |
598 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1413947382 CA368115290 |
598 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA368115292 rs1209255115 |
599 | D>N | No |
ClinGen TOPMed |
|
|
rs1334944246 CA368115307 |
600 | F>L | No |
ClinGen gnomAD |
|
| TCGA novel | 600 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4335368 rs766297031 |
601 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335369 rs766297031 |
601 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1212277097 CA368115319 |
603 | F>L | No |
ClinGen TOPMed |
|
|
rs1341074441 CA368115329 |
604 | M>K | No |
ClinGen TOPMed |
|
|
CA368115346 rs1371741004 |
606 | K>R | No |
ClinGen gnomAD |
|
|
CA368115377 rs752211281 |
610 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4335372 rs752211281 |
610 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368115378 rs1289329882 |
611 | L>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 613 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 614 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368115403 rs1292178545 |
615 | I>V | No |
ClinGen gnomAD |
|
|
CA368115409 rs1443633951 |
616 | T>P | No |
ClinGen TOPMed |
|
|
rs1262089052 CA368115417 |
617 | S>P | No |
ClinGen gnomAD |
|
|
CA368115426 rs1429143613 |
618 | G>V | No |
ClinGen TOPMed |
|
|
CA368115429 rs1386119970 |
619 | F>I | No |
ClinGen TOPMed |
|
|
rs757714719 CA4335376 |
621 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1356235443 CA368115468 |
624 | G>D | No |
ClinGen gnomAD |
|
|
rs1211599576 CA368115472 |
625 | K>E | No |
ClinGen gnomAD |
|
|
CA368115497 rs1480246447 |
628 | N>K | No |
ClinGen gnomAD |
|
|
rs117293522 CA4335377 |
628 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs756059530 CA368115499 |
629 | S>A | No |
ClinGen TOPMed |
|
|
CA162820448 rs756059530 |
629 | S>P | No |
ClinGen TOPMed |
|
|
rs746224793 CA4335378 |
630 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA4335380 rs780333274 |
634 | Y>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 635 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776800679 CA4335383 |
638 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs993880464 CA162820449 |
639 | N>D | No |
ClinGen TOPMed |
|
|
rs1352866231 CA368115570 |
639 | N>K | No |
ClinGen gnomAD |
|
|
CA4335384 rs749290137 |
639 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1461875848 CA368115591 |
642 | Q>R | No |
ClinGen gnomAD |
|
|
CA368115598 rs1309142785 |
643 | G>E | No |
ClinGen gnomAD |
|
|
CA368115626 rs1352903371 |
647 | V>G | No |
ClinGen gnomAD |
No associated diseases with Q9UP38
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| cell surface | The external part of the cell wall and/or plasma membrane. |
| focal adhesion | A cell-substrate junction that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments. In insects focal adhesion has also been referred to as hemi-adherens junction (HAJ). |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| Wnt signalosome | A multiprotein protein complex containing membrane-localized Wnt receptors and cytosolic protein complexes, which is capable of transmitting the Wnt signal. Contains at least a Wnt protein, LRP5 or LRP6, a member of the Frizzled (Fz) family, Axin and and a Dishevelled (DVL) protein. |
6 GO annotations of molecular function
| Name | Definition |
|---|---|
| frizzled binding | Binding to a frizzled (fz) receptor. |
| G protein-coupled receptor activity | Combining with an extracellular signal and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex. |
| PDZ domain binding | Binding to a PDZ domain of a protein, a domain found in diverse signaling proteins. |
| signaling receptor binding | Binding to one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. |
| Wnt receptor activity | Combining with a Wnt protein and transmitting the signal across the plasma membrane to initiate a change in cell activity. |
| Wnt-protein binding | Binding to a Wnt-protein, a secreted growth factor involved in signaling. |
25 GO annotations of biological process
| Name | Definition |
|---|---|
| astrocyte-dopaminergic neuron signaling | Cell-cell signaling that mediates the transfer of information from an astrocyte to a dopaminergic neuron. |
| autocrine signaling | Signaling between cells of the same type. The signal produced by the signaling cell binds to a receptor on, and affects a cell of the same type. |
| canonical Wnt signaling pathway | The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes. |
| canonical Wnt signaling pathway involved in mesenchymal stem cell differentiation | The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in mesenchymal stem cell differentiation. |
| canonical Wnt signaling pathway involved in osteoblast differentiation | The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in osteoblast differentiation. |
| cell-cell signaling | Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions. |
| endothelial cell differentiation | The process in which a mesodermal, bone marrow or neural crest cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium. |
| hard palate development | The biological process whose specific outcome is the progression of the hard palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The hard palate is the anterior portion of the palate consisting of bone and mucous membranes. |
| membranous septum morphogenesis | The process in which the membranous septum is generated and organized. The membranous septum is the upper part of ventricular septum. |
| muscular septum morphogenesis | The process in which the muscular septum is generated and organized. The muscular septum is the lower part of the ventricular septum. |
| negative regulation of BMP signaling pathway | Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway. |
| negative regulation of canonical Wnt signaling pathway | Any process that decreases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. |
| negative regulation of DNA-templated transcription | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
| negative regulation of oxidative stress-induced neuron death | Any process that stops, prevents or reduces the frequency, rate or extent of oxidative stress-induced neuron death. |
| neuron differentiation | The process in which a relatively unspecialized cell acquires specialized features of a neuron. |
| outflow tract morphogenesis | The process in which the anatomical structures of the outflow tract are generated and organized. The outflow tract is the portion of the heart through which blood flows into the arteries. |
| planar cell polarity pathway involved in neural tube closure | The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors that modulates the establishment of planar polarity contributing to neural tube closure. |
| positive regulation of DNA-binding transcription factor activity | Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription. |
| positive regulation of DNA-templated transcription | Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
| positive regulation of neuron projection development | Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). |
| positive regulation of protein phosphorylation | Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein. |
| presynapse assembly | The aggregation, arrangement and bonding together of a set of components to form a presynapse. |
| regulation of presynapse assembly | Any process that modulates the frequency, rate or extent of presynapse assembly. |
| response to xenobiotic stimulus | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a xenobiotic, a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical. |
| Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation | Any Wnt signaling pathway that is involved in midbrain dopaminergic neuron differentiation. |
23 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| O19116 | SFRP1 | Secreted frizzled-related protein 1 | Bos taurus (Bovine) | PR |
| Q9DEQ4 | SFRP1 | Secreted frizzled-related protein 1 | Gallus gallus (Chicken) | PR |
| Q9IA96 | SFRP2 | Secreted frizzled-related protein 2 | Gallus gallus (Chicken) | PR |
| O57328 | FZD1 | Frizzled-1 | Gallus gallus (Chicken) | PR |
| O00144 | FZD9 | Frizzled-9 | Homo sapiens (Human) | PR |
| O75084 | FZD7 | Frizzled-7 | Homo sapiens (Human) | PR |
| Q14332 | FZD2 | Frizzled-2 | Homo sapiens (Human) | PR |
| Q6FHJ7 | SFRP4 | Secreted frizzled-related protein 4 | Homo sapiens (Human) | PR |
| Q8N474 | SFRP1 | Secreted frizzled-related protein 1 | Homo sapiens (Human) | PR |
| Q96HF1 | SFRP2 | Secreted frizzled-related protein 2 | Homo sapiens (Human) | PR |
| Q9ULW2 | FZD10 | Frizzled-10 | Homo sapiens (Human) | PR |
| O60353 | FZD6 | Frizzled-6 | Homo sapiens (Human) | PR |
| Q9Z1N6 | Sfrp4 | Secreted frizzled-related sequence protein 4 | Mus musculus (Mouse) | PR |
| P97299 | Sfrp2 | Secreted frizzled-related protein 2 | Mus musculus (Mouse) | PR |
| Q8C4U3 | Sfrp1 | Secreted frizzled-related protein 1 | Mus musculus (Mouse) | PR |
| Q9JIP6 | Fzd2 | Frizzled-2 | Mus musculus (Mouse) | PR |
| Q61090 | Fzd7 | Frizzled-7 | Mus musculus (Mouse) | PR |
| O70421 | Fzd1 | Frizzled-1 | Mus musculus (Mouse) | PR |
| Q9JLS4 | Sfrp4 | Secreted frizzled-related protein 4 | Rattus norvegicus (Rat) | PR |
| Q08464 | Fzd2 | Frizzled-2 | Rattus norvegicus (Rat) | PR |
| Q08463 | Fzd1 | Frizzled-1 | Rattus norvegicus (Rat) | PR |
| Q7YRN1 | SFRP4 | Secreted frizzled-related protein 4 | Macaca mulatta (Rhesus macaque) | PR |
| Q5BL72 | fzd7 | Frizzled-7 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAEEEAPKKS | RAAGGGASWE | LCAGALSARL | AEEGSGDAGG | RRRPPVDPRR | LARQLLLLLW |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LLEAPLLLGV | RAQAAGQGPG | QGPGPGQQPP | PPPQQQQSGQ | QYNGERGISV | PDHGYCQPIS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| IPLCTDIAYN | QTIMPNLLGH | TNQEDAGLEV | HQFYPLVKVQ | CSAELKFFLC | SMYAPVCTVL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EQALPPCRSL | CERARQGCEA | LMNKFGFQWP | DTLKCEKFPV | HGAGELCVGQ | NTSDKGTPTP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| SLLPEFWTSN | PQHGGGGHRG | GFPGGAGASE | RGKFSCPRAL | KVPSYLNYHF | LGEKDCGAPC |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EPTKVYGLMY | FGPEELRFSR | TWIGIWSVLC | CASTLFTVLT | YLVDMRRFSY | PERPIIFLSG |
| 370 | 380 | 390 | 400 | 410 | 420 |
| CYTAVAVAYI | AGFLLEDRVV | CNDKFAEDGA | RTVAQGTKKE | GCTILFMMLY | FFSMASSIWW |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VILSLTWFLA | AGMKWGHEAI | EANSQYFHLA | AWAVPAIKTI | TILALGQVDG | DVLSGVCFVG |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LNNVDALRGF | VLAPLFVYLF | IGTSFLLAGF | VSLFRIRTIM | KHDGTKTEKL | EKLMVRIGVF |
| 550 | 560 | 570 | 580 | 590 | 600 |
| SVLYTVPATI | VIACYFYEQA | FRDQWERSWV | AQSCKSYAIP | CPHLQAGGGA | PPHPPMSPDF |
| 610 | 620 | 630 | 640 | ||
| TVFMIKYLMT | LIVGITSGFW | IWSGKTLNSW | RKFYTRLTNS | KQGETTV |