O00144
Gene name |
FZD9 (FZD3) |
Protein name |
Frizzled-9 |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:8326 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for O00144
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-O00144-F1 | Predicted | AlphaFoldDB |
534 variants for O00144
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA367778500 rs1479547992 |
3 | V>M | No |
ClinGen TOPMed |
|
|
CA367778526 rs1199239605 |
7 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA367778525 rs1199239605 |
7 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA367778537 rs1197927604 |
9 | A>E | No |
ClinGen TOPMed |
|
|
rs1554563136 CA367778591 |
18 | A>V | No |
ClinGen gnomAD |
|
|
CA4286864 rs782003819 |
20 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA367778620 rs1201234496 |
23 | L>P | No |
ClinGen TOPMed |
|
|
CA367778625 rs1275096178 |
24 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
rs782438219 CA4286866 |
24 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1343799030 CA367778624 |
24 | E>K | No |
ClinGen TOPMed |
|
|
CA4286867 rs781927126 |
27 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA4286869 CA367778653 rs782731406 |
28 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367778656 rs868937985 |
29 | D>A | No |
ClinGen Ensembl |
|
|
rs1554563145 CA367778659 |
29 | D>E | No |
ClinGen gnomAD |
|
|
rs781851365 CA4286870 |
29 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA367778658 rs868937985 |
29 | D>V | No |
ClinGen Ensembl |
|
|
rs1554563146 CA367778662 |
30 | P>A | No |
ClinGen gnomAD |
|
|
CA367778663 rs1554563146 |
30 | P>S | No |
ClinGen gnomAD |
|
|
rs1333160658 CA367778670 |
31 | E>A | No |
ClinGen TOPMed |
|
|
rs1333160658 CA367778672 |
31 | E>V | No |
ClinGen TOPMed |
|
|
CA367778678 rs1305398764 |
32 | R>H | No |
ClinGen TOPMed |
|
|
CA4286871 rs782128581 |
34 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554563155 CA367778696 |
35 | G>A | No |
ClinGen gnomAD |
|
|
rs1333375420 CA367778693 |
35 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1554563156 CA367778699 |
36 | A>S | No |
ClinGen gnomAD |
|
|
CA367778703 rs1554563158 |
36 | A>V | No |
ClinGen gnomAD |
|
|
CA4286872 rs782793152 |
37 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs559302614 CA4286873 |
38 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs559302614 CA367778713 |
38 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1361834097 CA367778733 |
41 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA367778735 rs1361834097 |
41 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA4286876 rs781822452 |
43 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA367778760 rs1239975749 |
45 | P>R | No |
ClinGen TOPMed |
|
|
CA367778763 rs1554563167 |
46 | M>V | No |
ClinGen gnomAD |
|
|
rs1181159872 CA367778781 |
48 | R>C | No |
ClinGen TOPMed |
|
|
rs782497063 CA4286878 |
48 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1201817320 CA367778797 |
51 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA4286880 rs200757525 |
52 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs1554563179 CA367778808 |
52 | Y>C | No |
ClinGen gnomAD |
|
|
rs782410069 CA4286881 |
53 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs782689397 CA4286882 |
54 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs782689397 CA367778817 |
54 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs781964820 CA4286885 |
56 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs781964820 CA367778831 |
56 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs782389995 CA4286887 |
57 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA4286886 rs782103545 |
57 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1554563194 CA367778855 |
60 | L>R | No |
ClinGen gnomAD |
|
|
CA4286888 rs782015381 |
62 | G>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 64 | T>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA367778886 rs1554563201 |
65 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA367778890 rs1563353972 |
66 | Q>* | No |
ClinGen Ensembl |
|
|
rs782695258 CA4286890 |
67 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1339937594 CA367778946 |
75 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA367778951 rs1563353996 |
75 | E>V | No |
ClinGen Ensembl |
|
|
rs1334996848 CA367778962 |
77 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs782079145 CA4286892 |
77 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA4286895 rs781854794 |
78 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs781854794 CA4286894 |
78 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA4286896 rs782798543 |
80 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs372060832 CA367778993 |
82 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4286898 rs372060832 |
82 | Y>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA367778990 rs1416324972 |
82 | Y>H | No |
ClinGen TOPMed |
|
|
rs201878512 CA4286899 |
83 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1554563213 CA367778998 |
83 | G>C | No |
ClinGen gnomAD |
|
|
rs1554563221 CA367779034 |
88 | L>V | No |
ClinGen gnomAD |
|
|
rs782634341 CA4286902 |
89 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA367779048 rs1583871478 |
90 | F>C | No |
ClinGen Ensembl |
|
|
rs1554563225 CA367779066 |
93 | C>G | No |
ClinGen gnomAD |
|
|
CA4286903 rs782268651 |
93 | C>W | No |
ClinGen ExAC gnomAD |
|
|
rs782199592 CA4286906 |
96 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA367779093 rs1554563229 |
97 | A>E | No |
ClinGen gnomAD |
|
|
rs1554563229 CA367779095 |
97 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 98 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1554563235 CA367779109 |
99 | M>I | No |
ClinGen gnomAD |
|
|
rs782111677 CA4286909 |
102 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA367779134 rs1554563240 |
103 | Q>* | No |
ClinGen gnomAD |
|
|
rs782797612 CA4286910 |
103 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1189038348 CA367779139 |
104 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs782016785 CA4286911 |
105 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA367779152 rs1563354103 |
106 | T>S | No |
ClinGen Ensembl |
|
|
rs781814209 CA4286914 |
107 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA4286913 rs782704580 |
107 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA4286915 rs782476477 |
108 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA4286916 rs782757278 |
109 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1216288652 CA367779185 |
112 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1288678390 CA367779189 |
112 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1288678390 CA367779187 |
112 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1216288652 CA367779186 |
112 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs776325053 CA4286919 |
113 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371558043 CA160067069 |
113 | P>S | No |
ClinGen Ensembl |
|
|
rs1356269300 CA367779194 |
114 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1356269300 CA367779196 |
114 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA367779203 rs1284798043 |
115 | C>S | No |
ClinGen TOPMed |
|
|
CA367779211 rs1554563253 |
116 | E>K | No |
ClinGen gnomAD |
|
|
rs112773403 CA160067084 |
117 | Q>P | No |
ClinGen Ensembl |
|
|
rs1338658283 CA367779226 |
118 | A>T | No |
ClinGen TOPMed |
|
|
CA367779245 rs1554563256 COSM1568888 |
121 | R>C | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
| TCGA novel | 121 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1400893164 CA367779248 |
121 | R>L | No |
ClinGen TOPMed |
|
|
CA367779255 rs1161513152 |
122 | C>* | No |
ClinGen TOPMed gnomAD |
|
|
CA4286923 rs782600769 |
123 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA367779274 rs1554563264 |
125 | I>M | No |
ClinGen gnomAD |
|
|
CA367779269 rs1404627103 |
125 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA4286926 rs782000137 |
126 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367779291 rs1554563267 |
128 | Q>* | No |
ClinGen gnomAD |
|
|
CA367779311 rs1554563269 |
130 | N>I | No |
ClinGen gnomAD |
|
|
rs782418729 CA367779325 |
132 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782418729 CA4286929 |
132 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782278157 CA4286928 |
132 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367779324 rs782278157 |
132 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4286930 rs782418729 |
132 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4286932 rs782351404 |
133 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA4286931 rs782073205 |
133 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA4286933 rs781972322 |
134 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs781972322 CA367779337 |
134 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA367779333 rs1554563273 |
134 | P>S | No |
ClinGen gnomAD |
|
|
rs1489107305 CA367779340 |
135 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA4286935 rs538778244 |
138 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs372342933 CA367779371 |
139 | C>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA367779378 rs1230570552 |
140 | A>V | No |
ClinGen TOPMed |
|
|
rs1554563281 CA367779382 |
141 | R>L | No |
ClinGen gnomAD |
|
|
CA4286937 rs782047303 |
141 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782702023 CA4286938 |
144 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs1554563284 CA367779400 |
145 | R>G | No |
ClinGen gnomAD |
|
|
CA367779402 rs782636147 |
145 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4286941 rs782636147 |
145 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367779416 rs1554563292 |
147 | D>G | No |
ClinGen gnomAD |
|
|
rs1342614883 CA367779425 |
148 | P>Q | No |
ClinGen TOPMed |
|
|
rs781871788 CA4286942 |
149 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA367779436 rs1435523202 |
150 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1291513232 CA367779433 |
150 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1350354391 CA367779447 |
152 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1554563295 CA367779454 |
153 | M>L | No |
ClinGen gnomAD |
|
|
rs1554563299 CA367779465 |
154 | E>G | No |
ClinGen gnomAD |
|
|
CA367779462 rs1554563297 |
154 | E>Q | No |
ClinGen gnomAD |
|
|
rs1325404653 CA367779477 |
156 | P>S | No |
ClinGen TOPMed |
|
|
rs1170781570 CA367779483 |
157 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA367779481 rs1170781570 |
157 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA367779484 rs1478566511 |
157 | E>V | No |
ClinGen TOPMed |
|
|
rs1554563309 CA367779499 |
159 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 159 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA367779506 rs1554563310 |
160 | T>K | No |
ClinGen gnomAD |
|
|
CA367779512 rs1554563311 |
161 | A>D | No |
ClinGen gnomAD |
|
|
CA367779514 rs1554563311 |
161 | A>V | No |
ClinGen gnomAD |
|
|
CA367779515 rs1426798842 |
162 | G>S | No |
ClinGen TOPMed |
|
| TCGA novel | 164 | A>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782692525 CA4286944 |
164 | A>T | No |
ClinGen ExAC |
|
|
CA4286946 rs782330628 |
167 | H>D | No |
ClinGen ExAC gnomAD |
|
|
rs1257427741 CA367779567 |
170 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1554563317 CA367779576 |
171 | G>D | No |
ClinGen gnomAD |
|
|
CA367779597 rs1554563320 |
174 | P>L | No |
ClinGen gnomAD |
|
|
CA367779599 rs1554563322 |
175 | V>L | No |
ClinGen gnomAD |
|
|
CA367779608 rs1554563330 |
176 | A>E | No |
ClinGen gnomAD |
|
|
rs1554563327 CA367779604 |
176 | A>S | No |
ClinGen gnomAD |
|
|
CA367779615 rs1563354348 |
177 | P>L | No |
ClinGen Ensembl |
|
|
CA367779616 rs1554563331 |
178 | R>W | No |
ClinGen gnomAD |
|
|
rs1276469452 CA367779624 |
179 | P>R | No |
ClinGen TOPMed |
|
|
rs1444400608 CA367779631 |
180 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA367779627 rs1554563332 |
180 | A>T | No |
ClinGen gnomAD |
|
|
CA367779633 rs1554563334 |
181 | R>S | No |
ClinGen gnomAD |
|
|
rs1554563335 CA367779644 |
182 | P>L | No |
ClinGen gnomAD |
|
|
rs1331376416 CA367779647 |
183 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA367779651 rs1356972019 |
184 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA367779673 rs1554563346 |
187 | G>D | No |
ClinGen gnomAD |
|
|
CA367779681 rs1426307014 |
188 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1414739487 CA367779676 |
188 | P>S | No |
ClinGen TOPMed |
|
|
rs769369970 CA4286951 |
189 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554563350 CA367779687 |
190 | A>T | No |
ClinGen gnomAD |
|
|
CA367779698 rs1554563351 |
191 | G>V | No |
ClinGen gnomAD |
|
|
rs575621716 CA160067294 |
192 | G>D | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
COSM4139357 rs782300865 CA4286952 |
192 | G>S | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1459118499 CA367779733 |
197 | E>Q | No |
ClinGen TOPMed |
|
|
rs17852398 CA160067300 |
199 | P>R | No |
ClinGen Ensembl |
|
|
CA4286954 rs782077630 |
199 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554563364 CA367779756 |
200 | E>D | No |
ClinGen Ensembl |
|
|
rs782136427 CA4286957 |
200 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781853577 CA4286956 |
200 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs782795346 CA4286958 |
201 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367779765 rs1313006296 |
202 | F>L | No |
ClinGen TOPMed |
|
|
rs1280407029 CA367779790 |
205 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1280407029 CA367779788 |
205 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1554563370 CA367779803 |
207 | K>E | No |
ClinGen gnomAD |
|
|
CA367779818 rs375403747 |
209 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782580729 CA4286961 |
209 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs375403747 CA4286960 |
209 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA367779823 rs1554563378 |
210 | S>P | No |
ClinGen gnomAD |
|
|
CA367779834 rs1554563384 |
211 | C>* | No |
ClinGen gnomAD |
|
|
rs1554563382 CA367779829 |
211 | C>R | No |
ClinGen gnomAD |
|
|
CA367779836 rs1309852211 COSM1207718 |
212 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1376327965 CA367779845 |
213 | P>L | No |
ClinGen TOPMed |
|
|
rs1376327965 CA367779844 |
213 | P>Q | No |
ClinGen TOPMed |
|
|
rs1376327965 CA367779846 |
213 | P>R | No |
ClinGen TOPMed |
|
|
rs781828087 CA4286962 |
213 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1360551989 CA367779850 |
214 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1360551989 CA367779851 |
214 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA367779870 rs1554563389 |
217 | P>L | No |
ClinGen gnomAD |
|
|
rs1175866183 CA367779875 |
218 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs782651060 CA4286964 |
218 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175866183 CA367779873 |
218 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1015078235 CA160067396 |
223 | W>* | No |
ClinGen Ensembl |
|
| TCGA novel | 224 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs971589447 CA160067397 |
225 | R>Q | No |
ClinGen Ensembl |
|
|
CA367779935 rs1554563396 |
225 | R>W | No |
ClinGen gnomAD |
|
|
rs1554563399 CA367779948 |
226 | R>L | No |
ClinGen gnomAD |
|
|
rs782340783 CA367779956 |
227 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782340783 CA4286969 |
227 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554563403 CA367779977 |
228 | K>R | No |
ClinGen gnomAD |
|
|
rs141168260 CA160067425 |
230 | F>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs782243429 CA4286971 |
231 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 231 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA367780031 rs782023448 |
233 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4286973 rs782023448 |
233 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367780052 rs1554563406 |
234 | W>C | No |
ClinGen gnomAD |
|
|
rs782170377 CA4286974 |
236 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA4286975 rs782703347 |
237 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs782703347 CA367780083 |
237 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1554563410 CA367780125 |
240 | A>V | No |
ClinGen gnomAD |
|
|
rs782085952 CA4286978 |
243 | F>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 243 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4286981 COSM453342 rs782538318 |
247 | A>T | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1311312226 CA367780220 |
249 | T>P | No |
ClinGen TOPMed |
|
|
rs1554563421 CA367780227 |
249 | T>S | No |
ClinGen gnomAD |
|
|
CA160067494 rs558152721 |
251 | L>F | No |
ClinGen 1000Genomes |
|
|
rs1554563424 CA367780250 |
251 | L>P | No |
ClinGen gnomAD |
|
|
rs781785546 CA4286983 |
252 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA367780266 rs1228416720 |
253 | F>V | No |
ClinGen TOPMed |
|
| TCGA novel | 253 | F>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA367780294 rs1554563429 |
256 | E>K | No |
ClinGen gnomAD |
|
|
CA367780312 rs1554563431 |
257 | P>S | No |
ClinGen gnomAD |
|
|
CA367780327 rs1554563432 |
258 | H>L | No |
ClinGen gnomAD |
|
|
rs1034602722 CA160067520 |
258 | H>Q | No |
ClinGen gnomAD |
|
|
CA4286984 rs373157288 |
258 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554563434 CA367780336 |
259 | R>C | No |
ClinGen gnomAD |
|
|
CA367780338 rs1554563436 |
259 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA367780342 rs1554563436 |
259 | R>P | No |
ClinGen gnomAD |
|
|
CA4286985 rs782599690 |
261 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA367780362 rs1295926214 |
261 | Q>P | No |
ClinGen TOPMed |
|
|
CA160067539 rs376108024 |
264 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA4286987 rs376108024 |
264 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs376132966 CA4286990 |
265 | R>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1455756838 CA367780405 |
265 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA4286989 rs376132966 |
265 | R>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1554563444 CA367780414 |
267 | I>V | No |
ClinGen gnomAD |
|
|
CA367780423 rs1367262158 |
268 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1424442556 CA367780453 |
272 | M>R | No |
ClinGen TOPMed |
|
|
rs1554563451 CA367780469 |
274 | Y>C | No |
ClinGen Ensembl |
|
|
rs1554563451 CA367780470 |
274 | Y>S | No |
ClinGen Ensembl |
|
|
rs782203045 CA4286992 |
275 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA367780477 rs1420177208 |
275 | N>S | No |
ClinGen TOPMed |
|
|
CA367780492 rs1191763746 |
277 | Y>* | No |
ClinGen TOPMed |
|
|
CA367780490 rs1554563456 |
277 | Y>C | No |
ClinGen gnomAD |
|
|
rs1554563454 CA367780487 |
277 | Y>H | No |
ClinGen gnomAD |
|
|
rs782778281 CA4286996 |
284 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA367780535 rs782778281 |
284 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA367780541 COSM1091551 rs1245478277 |
285 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1563354634 CA367780557 |
288 | G>E | No |
ClinGen Ensembl |
|
|
rs782039651 CA4286998 |
289 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA367780562 rs1563354652 |
289 | A>S | No |
ClinGen Ensembl |
|
|
CA367780560 rs1563354652 |
289 | A>T | No |
ClinGen Ensembl |
|
|
CA367780578 rs1554563464 |
291 | S>I | No |
ClinGen gnomAD |
|
|
CA367780576 rs1554563464 |
291 | S>N | No |
ClinGen gnomAD |
|
|
rs567917703 CA4287000 |
292 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs567917703 CA4287001 |
292 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA4287002 rs782761805 |
293 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA367780591 rs1217625707 |
294 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
CA367780590 COSM1637780 rs1217625707 |
294 | C>S | bone [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA4287005 rs73134914 |
295 | D>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA367780603 rs1583872360 |
295 | D>E | No |
ClinGen Ensembl |
|
|
rs782546523 CA4287004 |
295 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA367780608 rs1554563466 |
296 | Q>R | No |
ClinGen gnomAD |
|
|
CA367780612 rs1279188898 |
297 | E>K | No |
ClinGen TOPMed |
|
|
CA4287006 rs781793071 |
298 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs782237874 COSM3784084 CA4287009 |
300 | A>T | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs781960801 CA160067682 |
300 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA367780645 rs1168629728 |
302 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
CA160067693 rs946134081 |
302 | Y>H | No |
ClinGen Ensembl |
|
|
rs782657739 CA4287011 |
303 | V>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 305 | Q>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA367780672 rs1554563474 |
306 | E>G | No |
ClinGen gnomAD |
|
|
rs782281964 CA4287012 |
307 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs782281964 CA4287013 |
307 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA367780692 rs1554563477 |
308 | L>Q | No |
ClinGen gnomAD |
|
|
CA4287014 rs781928891 |
311 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367780743 rs782357130 |
313 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs782357130 CA4287016 |
313 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA367780764 rs1431198105 |
314 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1431198105 CA367780763 |
314 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
CA4287017 rs781980067 |
314 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1554563482 CA367780770 |
315 | L>P | No |
ClinGen gnomAD |
|
|
rs1554563485 CA367780803 |
318 | L>P | No |
ClinGen gnomAD |
|
|
rs1554563487 CA367780833 |
321 | Y>C | No |
ClinGen gnomAD |
|
|
rs782796354 CA4287019 |
323 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4287021 rs782048293 |
324 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA367780869 rs782048293 COSM3412268 |
324 | G>S | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1318124551 CA367780883 |
325 | M>V | No |
ClinGen TOPMed |
|
|
CA4287022 rs782730610 |
330 | W>* | No |
ClinGen ExAC |
|
|
CA160067766 rs782101484 |
331 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA367780965 rs1230670622 |
331 | W>* | No |
ClinGen TOPMed |
|
|
CA367780958 rs1583872470 |
331 | W>G | No |
ClinGen Ensembl |
|
|
CA367780974 rs1554563497 |
332 | V>E | No |
ClinGen gnomAD |
|
|
CA367780978 rs1554563497 |
332 | V>G | No |
ClinGen gnomAD |
|
|
CA4287023 rs781824483 |
332 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1583872486 CA367780987 |
333 | V>G | No |
ClinGen Ensembl |
|
|
CA367780992 rs1563354781 |
334 | L>V | No |
ClinGen Ensembl |
|
|
CA367781007 rs1329700001 |
335 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 336 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA367781068 rs1554563501 |
341 | A>T | No |
ClinGen gnomAD |
|
|
CA4287025 rs782640518 |
342 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA367781085 rs1554563503 |
342 | A>V | No |
ClinGen gnomAD |
|
|
CA160067806 rs559231844 COSM1313264 |
343 | G>R | Variant assessed as Somatic; impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs559231844 CA4287027 |
343 | G>W | No |
ClinGen ExAC gnomAD |
|
|
rs782332524 CA4287030 |
349 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367781174 rs1329341077 |
349 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs782187612 CA4287029 |
349 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554563508 CA367781186 |
350 | A>V | No |
ClinGen gnomAD |
|
|
rs1583872536 CA367781212 |
352 | E>D | No |
ClinGen Ensembl |
|
|
CA4287032 rs782238168 |
355 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs921189985 CA160067840 |
355 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1554563509 CA367781297 |
359 | H>R | No |
ClinGen gnomAD |
|
|
rs782017831 CA367781309 |
360 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs1583872574 CA367781311 |
360 | M>R | No |
ClinGen Ensembl |
|
|
rs782017831 CA4287034 |
360 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA367781328 rs1376847874 |
361 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA367781330 rs1376847874 |
361 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA367781334 rs1554563511 |
362 | A>S | No |
ClinGen gnomAD |
|
|
rs1199307584 CA367781362 |
364 | G>S | No |
ClinGen TOPMed |
|
|
rs782166013 CA4287035 |
366 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA4287036 rs782311502 |
366 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs369598057 CA4287040 |
367 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA160067852 rs542138331 |
367 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA TOPMed gnomAD |
|
CA4287039 rs369598057 |
367 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554563516 CA367781411 |
369 | K>E | No |
ClinGen gnomAD |
|
|
rs111619218 CA160067875 |
372 | V>A | No |
ClinGen gnomAD |
|
|
rs930955244 CA160067873 |
372 | V>I | No |
ClinGen gnomAD |
|
|
rs930955244 CA367781449 |
372 | V>L | No |
ClinGen gnomAD |
|
|
rs886801517 CA160067885 |
373 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
CA367781465 rs886801517 |
373 | I>S | No |
ClinGen TOPMed gnomAD |
|
|
rs782449413 CA4287044 |
375 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs782509182 CA4287047 |
377 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA4287048 rs373485212 |
377 | R>H | No |
ClinGen ESP ExAC gnomAD |
|
|
rs373485212 CA367781489 |
377 | R>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA4287049 rs782278695 |
378 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA367781509 rs1554563531 COSM1131528 |
380 | A>V | prostate [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA4287051 rs782569037 |
381 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1235509743 CA367781537 |
385 | T>A | No |
ClinGen TOPMed |
|
|
rs1307667599 CA367781548 |
387 | L>I | No |
ClinGen TOPMed |
|
| TCGA novel | 388 | C>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4287054 rs781982258 |
389 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs782220417 CA4287055 |
390 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs782220417 CA367781569 |
390 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA367781582 rs1554563538 |
392 | S>C | No |
ClinGen gnomAD |
|
|
CA367781591 rs1377721028 |
393 | T>K | No |
ClinGen TOPMed |
|
|
CA367781595 rs1394440286 |
394 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA367781616 rs1554563541 |
397 | A>E | No |
ClinGen gnomAD |
|
|
CA4287057 rs781928707 |
397 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs1172909758 CA367781626 |
399 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA160067978 rs202037150 |
399 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4287058 rs202037150 |
399 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA367781634 rs1234047013 |
400 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1554563549 CA367781643 |
402 | V>M | No |
ClinGen gnomAD |
|
|
CA4287062 rs782741814 |
404 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA4287061 rs145921800 |
404 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA160068013 rs199961288 |
406 | L>F | No |
ClinGen gnomAD |
|
|
CA367781670 rs1256459314 |
407 | S>P | No |
ClinGen TOPMed |
|
|
CA367781678 rs868993339 |
408 | G>D | No |
ClinGen Ensembl |
|
|
CA367781690 rs1554563555 |
410 | L>V | No |
ClinGen gnomAD |
|
|
CA4287065 rs532621192 |
411 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs781906732 CA4287066 |
412 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA367781712 rs1212625563 |
414 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1583872799 CA367781744 |
419 | T>P | No |
ClinGen Ensembl |
|
|
COSM1451962 rs1554563556 CA367781752 |
420 | G>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs547599913 CA4287068 |
422 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4287069 rs782243057 |
423 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA367781771 rs1554563559 |
423 | A>S | No |
ClinGen gnomAD |
|
|
CA367781787 rs1563355015 |
425 | F>L | No |
ClinGen Ensembl |
|
|
CA367781790 rs1554563562 |
426 | H>Y | No |
ClinGen gnomAD |
|
|
rs1240049086 CA367781805 |
428 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
COSM1091552 CA4287070 rs782493264 |
428 | R>H | Variant assessed as Somatic; 0.0 impact. central_nervous_system endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs782493264 CA4287071 |
428 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA367781817 rs1554563563 |
430 | I>F | No |
ClinGen gnomAD |
|
|
rs201244210 CA4287072 |
430 | I>T | No |
ClinGen 1000Genomes ExAC |
|
|
rs1583872850 CA367781823 |
431 | M>K | No |
ClinGen Ensembl |
|
|
rs114980092 CA160068073 |
431 | M>V | No |
ClinGen 1000Genomes |
|
|
rs201104999 CA4287073 |
432 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4287074 rs370867927 |
433 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370867927 CA367781840 |
433 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782381088 CA4287076 |
434 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA4287078 rs782088568 |
435 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367781862 rs1554563565 |
437 | N>I | No |
ClinGen gnomAD |
|
|
CA4287079 rs202155373 |
438 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs781874253 CA4287083 |
445 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA4287084 rs17856756 |
448 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA367781942 rs1160908709 |
449 | G>R | No |
ClinGen TOPMed |
|
|
CA160068152 rs781794887 |
450 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4287086 rs781794887 |
450 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367781960 rs1583872943 |
452 | S>P | No |
ClinGen Ensembl |
|
|
CA4287089 rs781893880 |
453 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs782572116 CA4287088 |
453 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA367781972 rs1487140215 |
454 | L>F | No |
ClinGen TOPMed |
|
| TCGA novel | 454 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1487140215 CA367781971 |
454 | L>V | No |
ClinGen TOPMed |
|
|
rs782536484 CA4287090 |
455 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367781983 rs1583872958 |
456 | T>P | No |
ClinGen Ensembl |
|
|
rs1554563583 CA367781992 |
457 | V>E | No |
ClinGen gnomAD |
|
|
CA367781991 rs1554563582 |
457 | V>L | No |
ClinGen gnomAD |
|
|
rs201201261 CA4287092 |
458 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782640636 CA4287091 |
458 | P>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 459 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4287095 rs373097291 |
459 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4287096 rs373097291 |
459 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1583872981 CA367782003 |
460 | T>P | No |
ClinGen Ensembl |
|
|
rs1554563587 CA367782015 |
461 | C>* | No |
ClinGen gnomAD |
|
|
rs371067074 CA4287098 |
462 | V>I | Variant assessed as Somatic; 0.0004632 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4287099 rs782125902 |
463 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA367782023 rs782125902 |
463 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA4287101 rs781961539 |
464 | V>F | No |
ClinGen ExAC |
|
|
rs1355718028 CA367782045 |
466 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA367782041 rs1554563589 |
466 | Y>N | No |
ClinGen gnomAD |
|
|
CA160068174 rs374521367 |
467 | V>A | No |
ClinGen ESP TOPMed |
|
|
rs1235297079 CA367782055 |
468 | Y>H | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 468 | Y>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs139948155 CA4287104 |
470 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA367782080 rs1277280245 |
471 | L>P | No |
ClinGen TOPMed |
|
|
CA4287105 rs552835695 |
472 | N>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782778291 CA4287106 |
472 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367782118 rs1554563596 |
476 | W>* | No |
ClinGen gnomAD |
|
|
rs781860918 CA4287107 |
476 | W>R | No |
ClinGen ExAC gnomAD |
|
|
rs921118075 CA160068200 |
477 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1390816222 CA367782134 |
479 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA367782133 rs1390816222 |
479 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA4287109 rs782604860 |
480 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1166467049 CA367782140 |
480 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA4287110 rs142802414 |
482 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782684299 CA4287113 |
483 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA367782173 rs1193988828 |
485 | C>W | No |
ClinGen TOPMed |
|
|
rs1554563601 CA367782176 |
486 | A>S | No |
ClinGen gnomAD |
|
|
CA367782180 rs1554563602 |
486 | A>V | No |
ClinGen gnomAD |
|
|
CA4287114 rs782273757 |
487 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs574487516 CA160068227 |
489 | A>E | No |
ClinGen 1000Genomes |
|
|
CA160068223 rs868913536 |
489 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1451541821 CA367782198 |
490 | G>W | No |
ClinGen TOPMed |
|
|
COSM1488669 CA4287117 rs776032343 |
492 | G>R | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554563607 CA367782215 |
493 | G>C | No |
ClinGen gnomAD |
|
|
CA367782217 rs1554563608 |
493 | G>V | No |
ClinGen gnomAD |
|
|
CA367782219 rs1554563613 |
494 | R>G | No |
ClinGen gnomAD |
|
|
rs782339488 CA4287119 |
494 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554563613 CA367782220 |
494 | R>W | No |
ClinGen gnomAD |
|
|
CA367782231 rs1554563615 |
496 | D>N | No |
ClinGen gnomAD |
|
|
CA367782253 rs1257627061 |
498 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA367782262 rs1554563617 |
500 | P>L | No |
ClinGen gnomAD |
|
|
CA4287123 rs367555625 |
501 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4287122 rs782413236 |
501 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA160068254 rs939684845 |
502 | G>D | No |
ClinGen Ensembl |
|
| TCGA novel | 503 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs906293096 CA160068263 |
507 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs781956465 CA4287126 |
508 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA367782312 rs1583873176 |
509 | V>G | No |
ClinGen Ensembl |
|
|
CA4287127 rs782072490 |
509 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4287128 rs782703359 |
510 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA4287129 rs781907193 CA367782320 |
511 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs781907193 CA4287130 |
511 | M>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 514 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200802560 CA4287132 |
514 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA160068282 rs1003019704 |
515 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 515 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs150610032 CA4287134 COSM4006757 |
516 | M>I | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA4287133 rs563493902 |
516 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782429594 CA4287136 |
518 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1554563634 CA367782377 |
520 | V>M | No |
ClinGen gnomAD |
|
|
rs17856757 CA367782405 |
524 | S>N | No |
ClinGen Ensembl |
|
|
rs1055955184 CA160068327 |
525 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs782677223 CA4287137 |
526 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA4287138 rs782677223 |
526 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1189855467 CA367782428 |
528 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA160068422 rs139673113 |
530 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554563643 CA367782468 |
531 | S>F | No |
ClinGen gnomAD |
|
|
rs575573500 CA4287142 |
531 | S>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs782170224 CA4287144 |
533 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs782795530 CA4287146 CA4287145 |
534 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1554563646 CA367782502 |
534 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs782116233 CA4287147 |
536 | T>I | No |
ClinGen ExAC |
|
|
rs782760881 CA4287148 |
539 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA367782606 rs1254214049 |
542 | Y>H | No |
ClinGen TOPMed |
|
|
rs1011824273 CA160068506 |
543 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs546151479 CA4287149 |
543 | R>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4287150 rs142246324 |
544 | K>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4287151 rs782685746 |
545 | I>K | No |
ClinGen ExAC gnomAD |
|
|
rs781899512 CA4287152 |
545 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA367782648 rs782685746 |
545 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA367782643 rs1554563657 |
545 | I>V | No |
ClinGen Ensembl |
|
|
CA4287154 rs782645248 |
547 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA367782696 rs1237708463 |
549 | R>L | No |
ClinGen TOPMed |
|
|
CA367782688 rs1554563661 |
549 | R>W | No |
ClinGen Ensembl |
|
|
CA160068554 rs1022336403 |
550 | A>D | No |
ClinGen Ensembl |
|
| TCGA novel | 551 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782597771 CA4287159 |
551 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA4287158 rs782478821 |
551 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA4287160 rs782180681 |
552 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4287163 rs782264029 |
556 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA4287164 rs17852397 |
556 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA367782791 rs1019630729 |
557 | A>G | No |
ClinGen gnomAD |
|
|
rs375512086 CA4287166 |
557 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA160068585 rs1019630729 |
557 | A>V | No |
ClinGen gnomAD |
|
|
rs1554563676 CA367782795 |
558 | P>A | No |
ClinGen gnomAD |
|
|
rs782320015 CA4287167 |
558 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA4287169 rs782156410 |
559 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782801976 CA4287170 |
560 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs115751996 CA367782841 |
561 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA367782834 rs1554563680 |
561 | Y>H | No |
ClinGen gnomAD |
|
|
CA4287172 rs782108423 |
562 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA4287173 rs782739024 |
563 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs921087014 CA160068629 |
563 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1443851803 CA367782867 |
564 | G>S | No |
ClinGen TOPMed |
|
|
rs781812011 CA4287175 |
565 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4287174 rs781812011 |
565 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1554563689 CA367782911 |
567 | C>* | No |
ClinGen TOPMed |
|
|
CA160068654 rs764538094 |
567 | C>Y | No |
ClinGen Ensembl |
|
|
CA367782919 rs1174351100 |
568 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA367782931 rs1434455070 |
569 | Y>S | No |
ClinGen TOPMed |
|
|
rs1563355504 CA367782958 |
571 | A>T | No |
ClinGen Ensembl |
|
|
CA4287178 rs782514203 |
571 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA4287179 COSM1451966 rs782644101 |
573 | T>A | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA367782993 rs879962794 |
574 | V>M | No |
ClinGen Ensembl |
|
|
CA367783007 rs1554563695 |
575 | V>I | No |
ClinGen gnomAD |
|
|
rs1438458340 CA367783035 |
576 | L>W | No |
ClinGen TOPMed |
|
|
rs149379186 CA160068659 |
578 | M>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA367783176 rs1235973230 |
582 | D>V | No |
ClinGen TOPMed |
|
|
CA4287182 rs368559421 |
583 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4287181 rs368559421 |
583 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554563701 CA367783282 |
587 | N>T | No |
ClinGen gnomAD |
|
|
rs1485869886 CA367783305 |
588 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA4287183 rs782181076 |
589 | T>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 589 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 590 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
No associated diseases with O00144
Functions
11 GO annotations of cellular component
| Name | Definition |
|---|---|
| cell surface | The external part of the cell wall and/or plasma membrane. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| filopodium membrane | The portion of the plasma membrane surrounding a filopodium. |
| glutamatergic synapse | A synapse that uses glutamate as a neurotransmitter. |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| mitochondrial membrane | Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. |
| perinuclear region of cytoplasm | Cytoplasm situated near, or occurring around, the nucleus. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| postsynapse | The part of a synapse that is part of the post-synaptic cell. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| G protein-coupled receptor activity | Combining with an extracellular signal and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex. |
| protein heterodimerization activity | Binding to a nonidentical protein to form a heterodimer. |
| protein homodimerization activity | Binding to an identical protein to form a homodimer. |
| Wnt receptor activity | Combining with a Wnt protein and transmitting the signal across the plasma membrane to initiate a change in cell activity. |
| Wnt-protein binding | Binding to a Wnt-protein, a secreted growth factor involved in signaling. |
22 GO annotations of biological process
| Name | Definition |
|---|---|
| B cell differentiation | The process in which a precursor cell type acquires the specialized features of a B cell. A B cell is a lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity. |
| bone regeneration | The regrowth of bone following its loss or destruction. |
| canonical Wnt signaling pathway | The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes. |
| learning or memory | The acquisition and processing of information and/or the storage and retrieval of this information over time. |
| negative regulation of mitochondrial depolarization | Any process that stops, prevents, or reduces the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive. |
| negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway | Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway. |
| negative regulation of necroptotic process | Any process that decreases the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors. |
| negative regulation of neuron apoptotic process | Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons. |
| negative regulation of skeletal muscle acetylcholine-gated channel clustering | Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle acetylcholine-gated channel clustering. |
| nervous system development | The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. |
| neuroblast proliferation | The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron. |
| ossification | The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance. |
| positive regulation of apoptotic process | Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process. |
| positive regulation of bone mineralization | Any process that activates or increases the frequency, rate or extent of bone mineralization. |
| positive regulation of canonical Wnt signaling pathway | Any process that increases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. |
| positive regulation of neural precursor cell proliferation | Any process that activates or increases the frequency, rate or extent of neural precursor cell proliferation. |
| postsynapse organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a postsynapse. |
| regulation of cell cycle | Any process that modulates the rate or extent of progression through the cell cycle. |
| regulation of cytosolic calcium ion concentration | Any process involved in the maintenance of an internal steady state of calcium ions within the cytosol of a cell or between the cytosol and its surroundings. |
| regulation of postsynaptic cytosolic calcium ion concentration | Any process that regulates the concentration of calcium in the postsynaptic cytosol. |
| regulation of skeletal muscle acetylcholine-gated channel clustering | Any process that modulates the frequency, rate or extent of skeletal muscle acetylcholine-gated channel clustering. |
| release of cytochrome c from mitochondria | The process that results in the movement of cytochrome c from the mitochondrial intermembrane space into the cytosol, which is part of the apoptotic signaling pathway and leads to caspase activation. |
23 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| O19116 | SFRP1 | Secreted frizzled-related protein 1 | Bos taurus (Bovine) | PR |
| Q9DEQ4 | SFRP1 | Secreted frizzled-related protein 1 | Gallus gallus (Chicken) | PR |
| O57328 | FZD1 | Frizzled-1 | Gallus gallus (Chicken) | PR |
| Q9IA96 | SFRP2 | Secreted frizzled-related protein 2 | Gallus gallus (Chicken) | PR |
| O75084 | FZD7 | Frizzled-7 | Homo sapiens (Human) | PR |
| Q14332 | FZD2 | Frizzled-2 | Homo sapiens (Human) | PR |
| Q6FHJ7 | SFRP4 | Secreted frizzled-related protein 4 | Homo sapiens (Human) | PR |
| Q8N474 | SFRP1 | Secreted frizzled-related protein 1 | Homo sapiens (Human) | PR |
| Q96HF1 | SFRP2 | Secreted frizzled-related protein 2 | Homo sapiens (Human) | PR |
| Q9ULW2 | FZD10 | Frizzled-10 | Homo sapiens (Human) | PR |
| Q9UP38 | FZD1 | Frizzled-1 | Homo sapiens (Human) | PR |
| O60353 | FZD6 | Frizzled-6 | Homo sapiens (Human) | PR |
| Q9Z1N6 | Sfrp4 | Secreted frizzled-related sequence protein 4 | Mus musculus (Mouse) | PR |
| P97299 | Sfrp2 | Secreted frizzled-related protein 2 | Mus musculus (Mouse) | PR |
| Q8C4U3 | Sfrp1 | Secreted frizzled-related protein 1 | Mus musculus (Mouse) | PR |
| O70421 | Fzd1 | Frizzled-1 | Mus musculus (Mouse) | PR |
| Q9JIP6 | Fzd2 | Frizzled-2 | Mus musculus (Mouse) | PR |
| Q61090 | Fzd7 | Frizzled-7 | Mus musculus (Mouse) | PR |
| Q08463 | Fzd1 | Frizzled-1 | Rattus norvegicus (Rat) | PR |
| Q9JLS4 | Sfrp4 | Secreted frizzled-related protein 4 | Rattus norvegicus (Rat) | PR |
| Q08464 | Fzd2 | Frizzled-2 | Rattus norvegicus (Rat) | PR |
| Q7YRN1 | SFRP4 | Secreted frizzled-related protein 4 | Macaca mulatta (Rhesus macaque) | PR |
| Q5BL72 | fzd7 | Frizzled-7 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAVAPLRGAL | LLWQLLAAGG | AALEIGRFDP | ERGRGAAPCQ | AVEIPMCRGI | GYNLTRMPNL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LGHTSQGEAA | AELAEFAPLV | QYGCHSHLRF | FLCSLYAPMC | TDQVSTPIPA | CRPMCEQARL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| RCAPIMEQFN | FGWPDSLDCA | RLPTRNDPHA | LCMEAPENAT | AGPAEPHKGL | GMLPVAPRPA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| RPPGDLGPGA | GGSGTCENPE | KFQYVEKSRS | CAPRCGPGVE | VFWSRRDKDF | ALVWMAVWSA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LCFFSTAFTV | LTFLLEPHRF | QYPERPIIFL | SMCYNVYSLA | FLIRAVAGAQ | SVACDQEAGA |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LYVIQEGLEN | TGCTLVFLLL | YYFGMASSLW | WVVLTLTWFL | AAGKKWGHEA | IEAHGSYFHM |
| 370 | 380 | 390 | 400 | 410 | 420 |
| AAWGLPALKT | IVILTLRKVA | GDELTGLCYV | ASTDAAALTG | FVLVPLSGYL | VLGSSFLLTG |
| 430 | 440 | 450 | 460 | 470 | 480 |
| FVALFHIRKI | MKTGGTNTEK | LEKLMVKIGV | FSILYTVPAT | CVIVCYVYER | LNMDFWRLRA |
| 490 | 500 | 510 | 520 | 530 | 540 |
| TEQPCAAAAG | PGGRRDCSLP | GGSVPTVAVF | MLKIFMSLVV | GITSGVWVWS | SKTFQTWQSL |
| 550 | 560 | 570 | 580 | 590 | |
| CYRKIAAGRA | RAKACRAPGS | YGRGTHCHYK | APTVVLHMTK | TDPSLENPTH | L |