Q9SZL5
Gene name |
At4g38150 (F20D10.270) |
Protein name |
Pentatricopeptide repeat-containing protein At4g38150 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT4G38150 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9SZL5
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9SZL5-F1 | Predicted | AlphaFoldDB |
22 variants for Q9SZL5
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH00558010 | 9 | V>I | No | 1000Genomes | |
| ENSVATH06847973 | 29 | R>L | No | 1000Genomes | |
| ENSVATH00558008 | 40 | D>E | No | 1000Genomes | |
| tmp_4_17901958_C_A | 54 | L>F | No | 1000Genomes | |
| tmp_4_17901956_C_T | 55 | R>Q | No | 1000Genomes | |
| tmp_4_17901951_C_T | 57 | E>K | No | 1000Genomes | |
| tmp_4_17901932_T_A | 63 | H>L | No | 1000Genomes | |
| tmp_4_17901921_G_T | 67 | P>T | No | 1000Genomes | |
| tmp_4_17901878_A_T | 81 | L>Q | No | 1000Genomes | |
| tmp_4_17901850_G_C | 90 | F>L | No | 1000Genomes | |
| ENSVATH14356200 | 101 | T>I | No | 1000Genomes | |
| ENSVATH00558007 | 114 | P>S | No | 1000Genomes | |
| ENSVATH06847970 | 117 | D>Y | No | 1000Genomes | |
| tmp_4_17901675_C_T | 149 | E>K | No | 1000Genomes | |
| tmp_4_17901649_C_G | 157 | M>I | No | 1000Genomes | |
| tmp_4_17901596_G_A | 175 | A>V | No | 1000Genomes | |
| tmp_4_17901551_C_A | 190 | R>M | No | 1000Genomes | |
| tmp_4_17901533_C_T | 196 | G>E | No | 1000Genomes | |
| tmp_4_17901506_C_T | 205 | G>D | No | 1000Genomes | |
| ENSVATH00558004 | 215 | N>Y | No | 1000Genomes | |
| ENSVATH06847968 | 235 | N>S | No | 1000Genomes | |
| ENSVATH00558003 | 259 | I>V | No | 1000Genomes |
No associated diseases with Q9SZL5
2 regional properties for Q9SZL5
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | Pentatricopeptide repeat | 130 - 164 | IPR002885-1 |
| repeat | Pentatricopeptide repeat | 164 - 236 | IPR002885-2 |
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
25 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9C7F1 | At1g28020 | Putative pentatricopeptide repeat-containing protein At1g28020 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C545 | At1g43010 | Putative pentatricopeptide repeat-containing protein At1g43010 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3ECH5 | At1g66345 | Pentatricopeptide repeat-containing protein At1g66345, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9CA73 | PCMP-E68 | Putative pentatricopeptide repeat-containing protein At1g74400 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GW57 | At1g80150 | Pentatricopeptide repeat-containing protein At1g80150, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q56XX3 | At2g02148 | Uncharacterized protein At2g02148 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0C894 | At2g02150 | Putative pentatricopeptide repeat-containing protein At2g02150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9ZU67 | At2g18520 | Pentatricopeptide repeat-containing protein At2g18520, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8S8Q7 | PCMP-H25 | Pentatricopeptide repeat-containing protein At2g34370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L6Y7 | At2g38420 | Pentatricopeptide repeat-containing protein At2g38420, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M891 | At3g02490 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LK58 | At3g13150 | Pentatricopeptide repeat-containing protein At3g13150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M2C8 | At3g61360 | Pentatricopeptide repeat-containing protein At3g61360 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZP3 | At3g62470 | Pentatricopeptide repeat-containing protein At3g62470, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3EAF8 | At3g62540 | Pentatricopeptide repeat-containing protein At3g62540, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L838 | COG4 | Conserved oligomeric Golgi complex subunit 4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M4P3 | DYW10 | Pentatricopeptide repeat-containing protein At4g16835, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SVH3 | At4g20740 | Pentatricopeptide repeat-containing protein At4g20740 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O49711 | At4g21880 | Pentatricopeptide repeat-containing protein At4g21880, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZ19 | PCMP-H16 | Pentatricopeptide repeat-containing protein At5g04780, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LEQ7 | At5g14820 | Pentatricopeptide repeat-containing protein At5g14820, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LFQ4 | At5g15010 | Pentatricopeptide repeat-containing protein At5g15010, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LXF4 | At5g15280 | Pentatricopeptide repeat-containing protein At5g15280, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FLJ6 | At5g61370 | Pentatricopeptide repeat-containing protein At5g61370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FJY7 | PCMP-H61 | Pentatricopeptide repeat-containing protein At5g66520 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MVPSSKAVVF | ARQMAKQIRV | TTPSMSATRF | LSTGDNGQVD | EQQNPPEPLP | NRPLRGERSS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NSHREPPARQ | AHNLGKSDTT | LSDDGFLEQF | KLGVNQDSRE | TPKPEQYPQE | PLPPPEDSDE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| IFKKMKEGGL | IPNAVAMLDG | LCKDGLVQEA | MKLFGLMRDK | GTIPEVVIYT | AVVEAFCKAH |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KIEDAKRIFR | KMQNNGIAPN | AFSYGVLVQG | LYNCNMLDDA | VAFCSEMLES | GHSPNVPTFV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| ELVDALCRVK | GVEQAQSAID | TLNQKGFAVN | VKAVKEFMDK | RAPFPSLAWE | AIFKKKPTEK |
| PF |