P0C894
PR
Gene name |
At2g02150 (F5O4.8) |
Protein name |
Putative pentatricopeptide repeat-containing protein At2g02150 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT2G02150 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P0C894
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P0C894-F1 | Predicted | AlphaFoldDB |
77 variants for P0C894
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_2_552567_C_T | 20 | S>N | No | 1000Genomes | |
| ENSVATH01612013 | 22 | S>C | No | 1000Genomes | |
| ENSVATH01612009 | 34 | C>Y | No | 1000Genomes | |
| tmp_2_552522_A_T | 35 | F>Y | No | 1000Genomes | |
| tmp_2_552472_A_C | 52 | F>V | No | 1000Genomes | |
| tmp_2_552451_G_C | 59 | L>V | No | 1000Genomes | |
| tmp_2_552408_G_T | 73 | S>Y | No | 1000Genomes | |
| ENSVATH05214528 | 89 | H>Q | No | 1000Genomes | |
| tmp_2_552353_A_T | 91 | D>E | No | 1000Genomes | |
| ENSVATH10613691 | 99 | E>G | No | 1000Genomes | |
| ENSVATH01612008 | 99 | E>K | No | 1000Genomes | |
| tmp_2_552308_T_A | 106 | L>F | No | 1000Genomes | |
| tmp_2_552277_C_G | 117 | E>Q | No | 1000Genomes | |
| tmp_2_552239_G_C | 129 | F>L | No | 1000Genomes | |
| tmp_2_552225_G_C | 134 | T>S | No | 1000Genomes | |
| tmp_2_552162_G_A | 155 | A>V | No | 1000Genomes | |
| tmp_2_552144_G_A | 161 | A>V | No | 1000Genomes | |
| ENSVATH05214527 | 163 | S>C | No | 1000Genomes | |
| tmp_2_552127_C_G | 167 | E>Q | No | 1000Genomes | |
| tmp_2_552106_C_T | 174 | D>N | No | 1000Genomes | |
| ENSVATH10613688 | 176 | D>H | No | 1000Genomes | |
| tmp_2_552075_G_T | 184 | T>K | No | 1000Genomes | |
| ENSVATH01612006 | 188 | C>G | No | 1000Genomes | |
| ENSVATH01612006 | 188 | C>R | No | 1000Genomes | |
| ENSVATH13872788 | 189 | V>G | No | 1000Genomes | |
| ENSVATH05214526 | 189 | V>L | No | 1000Genomes | |
| tmp_2_552048_C_A | 193 | G>V | No | 1000Genomes | |
| ENSVATH05214524 | 223 | V>I | No | 1000Genomes | |
| ENSVATH00201714 | 258 | A>S | No | 1000Genomes | |
| tmp_2_551853_G_A | 258 | A>V | No | 1000Genomes | |
| tmp_2_551847_G_T | 260 | P>Q | No | 1000Genomes | |
| ENSVATH01612005 | 260 | P>T | No | 1000Genomes | |
| ENSVATH10613687 | 262 | V>A | No | 1000Genomes | |
| ENSVATH10613686 | 268 | M>I | No | 1000Genomes | |
| ENSVATH05214520 | 287 | E>D | No | 1000Genomes | |
| tmp_2_551685_T_A | 314 | D>V | No | 1000Genomes | |
| tmp_2_551548_C_T | 360 | G>R | No | 1000Genomes | |
| ENSVATH10613554 | 370 | Y>C | No | 1000Genomes | |
| tmp_2_551436_C_T | 397 | G>D | No | 1000Genomes | |
| ENSVATH10613553 | 404 | T>I | No | 1000Genomes | |
| tmp_2_551328_A_T | 433 | V>E | No | 1000Genomes | |
| ENSVATH05214515 | 445 | D>H | No | 1000Genomes | |
| ENSVATH10613552 | 465 | T>P | No | 1000Genomes | |
| tmp_2_551173_C_A | 485 | A>S | No | 1000Genomes | |
| tmp_2_551172_G_A | 485 | A>V | No | 1000Genomes | |
| tmp_2_551164_T_A | 488 | M>L | No | 1000Genomes | |
| tmp_2_551137_C_G | 497 | E>Q | No | 1000Genomes | |
| tmp_2_551064_T_A | 521 | E>V | No | 1000Genomes | |
| ENSVATH13872786 | 532 | E>Q | No | 1000Genomes | |
| tmp_2_551029_T_G | 533 | M>L | No | 1000Genomes | |
| tmp_2_550995_A_C | 544 | I>S | No | 1000Genomes | |
| tmp_2_550975_C_A | 551 | A>S | No | 1000Genomes | |
| tmp_2_550972_A_G | 552 | Y>H | No | 1000Genomes | |
| ENSVATH10613549 | 555 | S>L | No | 1000Genomes | |
| ENSVATH00201711 | 558 | P>Q | No | 1000Genomes | |
| ENSVATH10613548 | 560 | E>A | No | 1000Genomes | |
| ENSVATH05214510 | 563 | H>Y | No | 1000Genomes | |
| ENSVATH10613547 | 600 | F>L | No | 1000Genomes | |
| ENSVATH00201710 | 607 | F>S | No | 1000Genomes | |
| ENSVATH01612003 | 610 | Q>H | No | 1000Genomes | |
| tmp_2_550797_T_A | 610 | Q>L | No | 1000Genomes | |
| ENSVATH00201709 | 611 | A>G | No | 1000Genomes | |
| tmp_2_550762_C_T | 622 | G>S | No | 1000Genomes | |
| ENSVATH00201708 | 624 | C>G | No | 1000Genomes | |
| tmp_2_550728_G_A | 633 | T>I | No | 1000Genomes | |
| tmp_2_550699_C_T | 643 | G>R | No | 1000Genomes | |
| ENSVATH05214508 | 652 | T>S | No | 1000Genomes | |
| ENSVATH01612002 | 681 | L>F | No | 1000Genomes | |
| ENSVATH05214504 | 710 | I>M | No | 1000Genomes | |
| ENSVATH05214503 | 711 | G>W | No | 1000Genomes | |
| ENSVATH01612001 | 722 | I>S | No | 1000Genomes | |
| tmp_2_550459_T_C | 723 | S>G | No | 1000Genomes | |
| ENSVATH00201706 | 733 | C>Y | No | 1000Genomes | |
| ENSVATH05214502 | 736 | E>K | No | 1000Genomes | |
| ENSVATH05214501 | 738 | V>L | No | 1000Genomes | |
| ENSVATH10613546 | 747 | H>Y | No | 1000Genomes | |
| ENSVATH05214500 | 758 | L>F | No | 1000Genomes |
No associated diseases with P0C894
9 regional properties for P0C894
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | Pentatricopeptide repeat | 196 - 222 | IPR002885-1 |
| repeat | Pentatricopeptide repeat | 226 - 261 | IPR002885-2 |
| repeat | Pentatricopeptide repeat | 260 - 367 | IPR002885-3 |
| repeat | Pentatricopeptide repeat | 365 - 471 | IPR002885-4 |
| repeat | Pentatricopeptide repeat | 470 - 506 | IPR002885-5 |
| repeat | Pentatricopeptide repeat | 506 - 540 | IPR002885-6 |
| repeat | Pentatricopeptide repeat | 541 - 606 | IPR002885-7 |
| repeat | Pentatricopeptide repeat | 612 - 681 | IPR002885-8 |
| repeat | Pentatricopeptide repeat | 682 - 718 | IPR002885-9 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| pre-mRNA binding | Binding to a pre-messenger RNA (pre-mRNA), an intermediate molecule between DNA and protein that may contain introns and, at least in part, encodes one or more proteins. Introns are removed from pre-mRNA to form a mRNA molecule. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| mitochondrial mRNA processing | Steps involved in processing precursor RNAs arising from transcription of operons in the mitochondrial genome into mature mRNAs. |
25 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9C7F1 | At1g28020 | Putative pentatricopeptide repeat-containing protein At1g28020 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C545 | At1g43010 | Putative pentatricopeptide repeat-containing protein At1g43010 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9CA73 | PCMP-E68 | Putative pentatricopeptide repeat-containing protein At1g74400 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GW57 | At1g80150 | Pentatricopeptide repeat-containing protein At1g80150, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q56XX3 | At2g02148 | Uncharacterized protein At2g02148 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9ZU67 | At2g18520 | Pentatricopeptide repeat-containing protein At2g18520, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8S8Q7 | PCMP-H25 | Pentatricopeptide repeat-containing protein At2g34370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L6Y7 | At2g38420 | Pentatricopeptide repeat-containing protein At2g38420, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M891 | At3g02490 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LK58 | At3g13150 | Pentatricopeptide repeat-containing protein At3g13150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZP3 | At3g62470 | Pentatricopeptide repeat-containing protein At3g62470, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3EAF8 | At3g62540 | Pentatricopeptide repeat-containing protein At3g62540, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L838 | COG4 | Conserved oligomeric Golgi complex subunit 4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M4P3 | DYW10 | Pentatricopeptide repeat-containing protein At4g16835, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SVH3 | At4g20740 | Pentatricopeptide repeat-containing protein At4g20740 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O49711 | At4g21880 | Pentatricopeptide repeat-containing protein At4g21880, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SZL5 | At4g38150 | Pentatricopeptide repeat-containing protein At4g38150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZ19 | PCMP-H16 | Pentatricopeptide repeat-containing protein At5g04780, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LEQ7 | At5g14820 | Pentatricopeptide repeat-containing protein At5g14820, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LXF4 | At5g15280 | Pentatricopeptide repeat-containing protein At5g15280, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FLJ6 | At5g61370 | Pentatricopeptide repeat-containing protein At5g61370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FJY7 | PCMP-H61 | Pentatricopeptide repeat-containing protein At5g66520 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3ECH5 | At1g66345 | Pentatricopeptide repeat-containing protein At1g66345, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LFQ4 | At5g15010 | Pentatricopeptide repeat-containing protein At5g15010, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M2C8 | At3g61360 | Pentatricopeptide repeat-containing protein At3g61360 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MFCSLRNFLH | VNRRFPRHVS | PSSSSLSQIQ | SPLCFPLSSP | SPSQSSFISC | PFVWFTSFLC |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IIRYPFVTKS | GTSTYSEDFD | RDWIRKVVHN | DLWDDPGLEK | LFDLTLAPIW | VPRVLVELKE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DPKLAFKFFK | WSMTRNGFKH | SVESYCIVAH | ILFCARMYYD | ANSVLKEMVL | SKADCDVFDV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LWSTRNVCVP | GFGVFDALFS | VLIDLGMLEE | AIQCFSKMKR | FRVFPKTRSC | NGLLHRFAKL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GKTDDVKRFF | KDMIGAGARP | TVFTYNIMID | CMCKEGDVEA | ARGLFEEMKF | RGLVPDTVTY |
| 310 | 320 | 330 | 340 | 350 | 360 |
| NSMIDGFGKV | GRLDDTVCFF | EEMKDMCCEP | DVITYNALIN | CFCKFGKLPI | GLEFYREMKG |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NGLKPNVVSY | STLVDAFCKE | GMMQQAIKFY | VDMRRVGLVP | NEYTYTSLID | ANCKIGNLSD |
| 430 | 440 | 450 | 460 | 470 | 480 |
| AFRLGNEMLQ | VGVEWNVVTY | TALIDGLCDA | ERMKEAEELF | GKMDTAGVIP | NLASYNALIH |
| 490 | 500 | 510 | 520 | 530 | 540 |
| GFVKAKNMDR | ALELLNELKG | RGIKPDLLLY | GTFIWGLCSL | EKIEAAKVVM | NEMKECGIKA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| NSLIYTTLMD | AYFKSGNPTE | GLHLLDEMKE | LDIEVTVVTF | CVLIDGLCKN | KLVSKAVDYF |
| 610 | 620 | 630 | 640 | 650 | 660 |
| NRISNDFGLQ | ANAAIFTAMI | DGLCKDNQVE | AATTLFEQMV | QKGLVPDRTA | YTSLMDGNFK |
| 670 | 680 | 690 | 700 | 710 | 720 |
| QGNVLEALAL | RDKMAEIGMK | LDLLAYTSLV | WGLSHCNQLQ | KARSFLEEMI | GEGIHPDEVL |
| 730 | 740 | 750 | 760 | ||
| CISVLKKHYE | LGCIDEAVEL | QSYLMKHQLL | TSDNDNALPN | M |