Q9LXF4
PR
Gene name |
At5g15280 (F8M21_170) |
Protein name |
Pentatricopeptide repeat-containing protein At5g15280, mitochondrial |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G15280 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LXF4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LXF4-F1 | Predicted | AlphaFoldDB |
125 variants for Q9LXF4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH00623097 | 15 | F>V | No | 1000Genomes | |
| tmp_5_4962339_T_C | 16 | L>P | No | 1000Genomes | |
| ENSVATH03058409 | 17 | N>K | No | 1000Genomes | |
| tmp_5_4962387_C_T | 32 | S>F | No | 1000Genomes | |
| ENSVATH00623098 | 53 | N>I | No | 1000Genomes | |
| ENSVATH03058410 | 71 | L>P | No | 1000Genomes | |
| ENSVATH03058411 | 81 | F>Y | No | 1000Genomes | |
| tmp_5_4962566_C_A | 92 | R>S | No | 1000Genomes | |
| ENSVATH06970764 | 93 | R>W | No | 1000Genomes | |
| tmp_5_4962620_T_A | 110 | L>M | No | 1000Genomes | |
| ENSVATH06970765 | 111 | G>C | No | 1000Genomes | |
| tmp_5_4962624_G_T | 111 | G>V | No | 1000Genomes | |
| tmp_5_4962660_A_G | 123 | N>S | No | 1000Genomes | |
| tmp_5_4962704_G_C | 138 | V>L | No | 1000Genomes | |
| ENSVATH06970766 | 140 | Y>D | No | 1000Genomes | |
| ENSVATH10760231 | 168 | L>S | No | 1000Genomes | |
| tmp_5_4962830_A_C | 180 | M>L | No | 1000Genomes | |
| ENSVATH06970767 | 181 | V>F | No | 1000Genomes | |
| ENSVATH06970768 | 182 | N>D | No | 1000Genomes | |
| tmp_5_4962843_G_A | 184 | G>E | No | 1000Genomes | |
| ENSVATH14036109 | 186 | F>V | No | 1000Genomes | |
| ENSVATH06970769 | 189 | L>V | No | 1000Genomes | |
| ENSVATH06970770 | 195 | D>Y | No | 1000Genomes | |
| ENSVATH10760232 | 203 | V>A | No | 1000Genomes | |
| tmp_5_4962965_A_C | 225 | I>L | No | 1000Genomes | |
| ENSVATH03058412 | 251 | L>F | No | 1000Genomes | |
| tmp_5_4963094_T_G | 268 | L>V | No | 1000Genomes | |
| ENSVATH06970771 | 269 | D>N | No | 1000Genomes | |
| tmp_5_4963128_C_T | 279 | A>V | No | 1000Genomes | |
| ENSVATH10760233 | 285 | L>F | No | 1000Genomes | |
| ENSVATH06970773 | 295 | S>R | No | 1000Genomes | |
| ENSVATH10760234 | 297 | I>S | No | 1000Genomes | |
| ENSVATH06970774 | 299 | I>L | No | 1000Genomes | |
| ENSVATH14036110 | 338 | G>D | No | 1000Genomes | |
| tmp_5_4963322_G_C | 344 | V>L | No | 1000Genomes | |
| ENSVATH03058413 | 351 | H>Y | No | 1000Genomes | |
| ENSVATH06970775 | 367 | W>R | No | 1000Genomes | |
| tmp_5_4963407_G_T | 372 | G>V | No | 1000Genomes | |
| tmp_5_4963444_T_G | 384 | I>M | No | 1000Genomes | |
| ENSVATH06970776 | 390 | K>R | No | 1000Genomes | |
| ENSVATH06970777 | 392 | D>N | No | 1000Genomes | |
| tmp_5_4963494_G_T | 401 | S>I | No | 1000Genomes | |
| tmp_5_4963514_T_A | 408 | L>M | No | 1000Genomes | |
| ENSVATH06970778 | 423 | G>R | No | 1000Genomes | |
| ENSVATH06970780 | 435 | V>A | No | 1000Genomes | |
| tmp_5_4963654_G_A | 454 | M>I | No | 1000Genomes | |
| ENSVATH10760265 | 458 | G>R | No | 1000Genomes | |
| ENSVATH06970782 | 461 | E>K | No | 1000Genomes | |
| tmp_5_4963691_G_A | 467 | D>N | No | 1000Genomes | |
| ENSVATH00623101 | 468 | P>A | No | 1000Genomes | |
| ENSVATH00623101 | 468 | P>S | No | 1000Genomes | |
| tmp_5_4963789_T_G | 499 | F>L | No | 1000Genomes | |
| ENSVATH06970784 | 519 | V>L | No | 1000Genomes | |
| tmp_5_4963911_A_C | 540 | E>A | No | 1000Genomes | |
| ENSVATH06970785 | 562 | S>L | No | 1000Genomes | |
| ENSVATH06970786 | 565 | S>G | No | 1000Genomes | |
| ENSVATH00623102 | 595 | Y>N | No | 1000Genomes | |
| tmp_5_4964136_G_A | 615 | S>N | No | 1000Genomes | |
| ENSVATH00623103 | 618 | S>N | No | 1000Genomes | |
| tmp_5_4964155_T_G | 621 | I>M | No | 1000Genomes | |
| tmp_5_4964163_A_G | 624 | K>R | No | 1000Genomes | |
| tmp_5_4964169_T_A | 626 | V>D | No | 1000Genomes | |
| ENSVATH03058415 | 629 | H>Y | No | 1000Genomes | |
| tmp_5_4964212_G_T | 640 | L>F | No | 1000Genomes | |
| tmp_5_4964273_C_A | 661 | Q>K | No | 1000Genomes | |
| ENSVATH03058416 | 668 | D>V | No | 1000Genomes | |
| tmp_5_4964300_A_G | 670 | N>D | No | 1000Genomes | |
| tmp_5_4964309_G_A | 673 | G>R | No | 1000Genomes | |
| ENSVATH14036111 | 678 | C>F | No | 1000Genomes | |
| tmp_5_4964390_C_T | 700 | P>S | No | 1000Genomes | |
| ENSVATH06970790 | 702 | S>P | No | 1000Genomes | |
| ENSVATH10760270 | 717 | L>V | No | 1000Genomes | |
| tmp_5_4964531_A_G | 747 | K>E | No | 1000Genomes | |
| ENSVATH00623105 | 751 | T>M | No | 1000Genomes | |
| tmp_5_4964568_T_C | 759 | F>S | No | 1000Genomes | |
| ENSVATH06970791 | 773 | S>C | No | 1000Genomes | |
| ENSVATH00623106 | 786 | R>S | No | 1000Genomes | |
| tmp_5_4964693_G_A | 801 | D>N | No | 1000Genomes | |
| tmp_5_4964708_C_A | 806 | H>N | No | 1000Genomes | |
| ENSVATH03058418 | 814 | S>G | No | 1000Genomes | |
| ENSVATH03058419 | 821 | D>N | No | 1000Genomes | |
| ENSVATH03058420 | 825 | Q>H | No | 1000Genomes | |
| ENSVATH00623107 | 834 | L>I | No | 1000Genomes | |
| ENSVATH00623108 | 836 | S>P | No | 1000Genomes | |
| tmp_5_4964838_G_A | 849 | C>Y | No | 1000Genomes | |
| ENSVATH06970792 | 855 | M>V | No | 1000Genomes | |
| tmp_5_4964880_T_A | 863 | L>H | No | 1000Genomes | |
| tmp_5_4964910_T_G | 873 | V>G | No | 1000Genomes | |
| tmp_5_4964941_G_A | 883 | M>I | No | 1000Genomes | |
| tmp_5_4964943_G_A | 884 | C>Y | No | 1000Genomes | |
| tmp_5_4965009_C_T | 906 | P>L | No | 1000Genomes | |
| ENSVATH03058421 | 907 | G>S | No | 1000Genomes | |
| ENSVATH10760271 | 921 | R>W | No | 1000Genomes | |
| tmp_5_4965102_G_T | 937 | G>V | No | 1000Genomes | |
| tmp_5_4965108_G_A | 939 | G>E | No | 1000Genomes | |
| ENSVATH06970794 | 968 | S>L | No | 1000Genomes | |
| tmp_5_4965217_G_T | 975 | M>I | No | 1000Genomes | |
| tmp_5_4965216_T_A | 975 | M>K | No | 1000Genomes | |
| tmp_5_4965240_G_C | 983 | R>T | No | 1000Genomes | |
| tmp_5_4965307_G_T | 1005 | M>I | No | 1000Genomes | |
| ENSVATH00623111 | 1024 | T>S | No | 1000Genomes | |
| ENSVATH06970797 | 1036 | D>N | No | 1000Genomes | |
| tmp_5_4965399_A_T | 1036 | D>V | No | 1000Genomes | |
| tmp_5_4965405_T_G | 1038 | L>R | No | 1000Genomes | |
| tmp_5_4965417_C_A | 1042 | T>K | No | 1000Genomes | |
| ENSVATH00623112 | 1044 | N>K | No | 1000Genomes | |
| ENSVATH03058422 | 1061 | R>H | No | 1000Genomes | |
| ENSVATH06970799 | 1069 | H>Y | No | 1000Genomes | |
| ENSVATH06970800 | 1072 | N>I | No | 1000Genomes | |
| ENSVATH06970801 | 1081 | P>T | No | 1000Genomes | |
| tmp_5_4965554_T_G | 1088 | S>A | No | 1000Genomes | |
| tmp_5_4965576_G_C | 1095 | R>T | No | 1000Genomes | |
| ENSVATH10760335 | 1111 | E>D | No | 1000Genomes | |
| tmp_5_4965635_A_G | 1115 | S>G | No | 1000Genomes | |
| ENSVATH06970802 | 1115 | S>I | No | 1000Genomes | |
| ENSVATH00623115 | 1123 | G>D | No | 1000Genomes | |
| ENSVATH00623116 | 1128 | F>Y | No | 1000Genomes | |
| ENSVATH10760336 | 1129 | C>Y | No | 1000Genomes | |
| tmp_5_4965710_C_T | 1140 | L>F | No | 1000Genomes | |
| tmp_5_4965783_G_A | 1164 | R>Q | No | 1000Genomes | |
| ENSVATH03058425 | 1167 | K>N | No | 1000Genomes | |
| ENSVATH00623117 | 1181 | K>M | No | 1000Genomes | |
| tmp_5_4965843_A_C | 1184 | Y>S | No | 1000Genomes | |
| tmp_5_4965893_T_A | 1201 | S>T | No | 1000Genomes | |
| ENSVATH14036113 | 1228 | R>C | No | 1000Genomes |
No associated diseases with Q9LXF4
10 regional properties for Q9LXF4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | Pentatricopeptide repeat | 357 - 393 | IPR002885-1 |
| repeat | Pentatricopeptide repeat | 391 - 461 | IPR002885-2 |
| repeat | Pentatricopeptide repeat | 531 - 558 | IPR002885-3 |
| repeat | Pentatricopeptide repeat | 601 - 628 | IPR002885-4 |
| repeat | Pentatricopeptide repeat | 633 - 667 | IPR002885-5 |
| repeat | Pentatricopeptide repeat | 738 - 773 | IPR002885-6 |
| repeat | Pentatricopeptide repeat | 840 - 872 | IPR002885-7 |
| repeat | Pentatricopeptide repeat | 909 - 977 | IPR002885-8 |
| repeat | Pentatricopeptide repeat | 978 - 1012 | IPR002885-9 |
| repeat | Pentatricopeptide repeat | 1081 - 1151 | IPR002885-10 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
25 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9C7F1 | At1g28020 | Putative pentatricopeptide repeat-containing protein At1g28020 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C545 | At1g43010 | Putative pentatricopeptide repeat-containing protein At1g43010 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3ECH5 | At1g66345 | Pentatricopeptide repeat-containing protein At1g66345, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9CA73 | PCMP-E68 | Putative pentatricopeptide repeat-containing protein At1g74400 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GW57 | At1g80150 | Pentatricopeptide repeat-containing protein At1g80150, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q56XX3 | At2g02148 | Uncharacterized protein At2g02148 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0C894 | At2g02150 | Putative pentatricopeptide repeat-containing protein At2g02150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9ZU67 | At2g18520 | Pentatricopeptide repeat-containing protein At2g18520, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8S8Q7 | PCMP-H25 | Pentatricopeptide repeat-containing protein At2g34370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L6Y7 | At2g38420 | Pentatricopeptide repeat-containing protein At2g38420, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M891 | At3g02490 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LK58 | At3g13150 | Pentatricopeptide repeat-containing protein At3g13150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M2C8 | At3g61360 | Pentatricopeptide repeat-containing protein At3g61360 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L838 | COG4 | Conserved oligomeric Golgi complex subunit 4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M4P3 | DYW10 | Pentatricopeptide repeat-containing protein At4g16835, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SVH3 | At4g20740 | Pentatricopeptide repeat-containing protein At4g20740 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O49711 | At4g21880 | Pentatricopeptide repeat-containing protein At4g21880, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SZL5 | At4g38150 | Pentatricopeptide repeat-containing protein At4g38150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZ19 | PCMP-H16 | Pentatricopeptide repeat-containing protein At5g04780, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LFQ4 | At5g15010 | Pentatricopeptide repeat-containing protein At5g15010, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FLJ6 | At5g61370 | Pentatricopeptide repeat-containing protein At5g61370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FJY7 | PCMP-H61 | Pentatricopeptide repeat-containing protein At5g66520 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3EAF8 | At3g62540 | Pentatricopeptide repeat-containing protein At3g62540, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LEQ7 | At5g14820 | Pentatricopeptide repeat-containing protein At5g14820, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZP3 | At3g62470 | Pentatricopeptide repeat-containing protein At3g62470, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MLNLLSISSS | SRLRFLNKVS | SLTYHYSFAF | FSTSSPASSS | SSSLGNDSAI | PRNYESSSFN |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LLSRSKEKRD | LTGSSLKDLL | FDLSDVVPNI | TRRFRRFPGL | KPEDVLELSL | GFESELQRGG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| IGNIKVQALW | EIFRWASVQY | QGFKHLPQAC | EIMASMLIRE | GMVKEVELLL | MEMERHGDTM |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VNEGIFCDLI | GKYVDDFDSR | KAVMLFDWMR | RKGLVPLTSC | YQILIDQLVR | VHRTESAYRI |
| 250 | 260 | 270 | 280 | 290 | 300 |
| CLDWVETRAE | LNHMNIDSIG | KVIELLCLDQ | KVQEARVLAR | KLVALGCILN | SSIYSKITIG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| YNEKQDFEDL | LSFIGEVKYE | PDVFVGNRIL | HSLCRRFGSE | RAYVYMEELE | HLGFKQDEVT |
| 370 | 380 | 390 | 400 | 410 | 420 |
| FGILIGWCCY | EGDIKRAVLY | LSEIMSKGYK | PDVYSYNAIL | SGLFRKGLWQ | HTHCILDEMK |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ENGMMLSLST | FKIMVTGYCK | ARQFEEAKRI | VNKMFGYGLI | EASKVEDPLS | EAFSLVGFDP |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LAVRLKRDND | STFSKAEFFD | DLGNGLYLHT | DLDAYEQRVN | MVLDRSVLPE | FNSLIVRASE |
| 550 | 560 | 570 | 580 | 590 | 600 |
| DGDLQTALRL | LDEMARWGQK | LSRRSFAVLM | RSLCASRAHL | RVSISLLEKW | PKLAYQLDGE |
| 610 | 620 | 630 | 640 | 650 | 660 |
| TLNFLVQEYC | KKGFSRHSKL | IFHKMVQMHH | PIDNVTYTSL | IRCFCKKETL | NDLLNVWGAA |
| 670 | 680 | 690 | 700 | 710 | 720 |
| QNDNWLPDLN | DCGDLWNCLV | RKGLVEEVVQ | LFERVFISYP | LSQSEACRIF | VEKLTVLGFS |
| 730 | 740 | 750 | 760 | 770 | 780 |
| CIAHSVVKRL | EGEGCIVEQE | VYNHLIKGLC | TEKKDSAAFA | ILDEMLDKKH | IPSLGSCLML |
| 790 | 800 | 810 | 820 | 830 | 840 |
| IPRLCRANKA | GTAFNLAEQI | DSSYVHYALI | KGLSLAGKML | DAENQLRIML | SNGLSSYNKI |
| 850 | 860 | 870 | 880 | 890 | 900 |
| YNVMFQGYCK | GNNWMKVEEV | LGLMVRKNII | CSVKSYREYV | RKMCLEPQSL | SAISLKEFLL |
| 910 | 920 | 930 | 940 | 950 | 960 |
| LGESNPGGVI | IYNMLIFYMF | RAKNHLEVNK | VLLEMQGRGV | LPDETTFNFL | VHGYSSSADY |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| SSSLRYLSAM | ISKGMKPNNR | SLRAVTSSLC | DNGDVKKALD | LWQVMESKGW | NLGSSVVQTK |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| IVETLISKGE | IPKAEDFLTR | VTRNGMMAPN | YDNIIKKLSD | RGNLDIAVHL | LNTMLKNQSI |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| PGSSSYDSVI | NGLLRYNQLD | KAMDFHTEMV | ELGLSPSIST | WSGLVHKFCE | ACQVLESERL |
| 1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
| IKSMVGLGES | PSQEMFKTVI | DRFRVEKNTV | KASEMMEMMQ | KCGYEVDFET | HWSLISNMSS |
| 1210 | 1220 | ||||
| SKEKKTTTAG | EGFLSRLLSG | NGFTWKR |