Q9CA73
PR
Gene name |
PCMP-E68 (At1g74400, F1M20.8) |
Protein name |
Putative pentatricopeptide repeat-containing protein At1g74400 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G74400 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9CA73
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9CA73-F1 | Predicted | AlphaFoldDB |
65 variants for Q9CA73
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH05144144 | 9 | H>N | No | 1000Genomes | |
| ENSVATH13807597 | 9 | H>R | No | 1000Genomes | |
| tmp_1_27963992_A_G | 14 | I>V | No | 1000Genomes | |
| ENSVATH01535358 | 20 | F>L | No | 1000Genomes | |
| tmp_1_27964025_C_A | 25 | H>N | No | 1000Genomes | |
| ENSVATH05144146 | 37 | Q>H | No | 1000Genomes | |
| tmp_1_27964092_C_A | 47 | A>D | No | 1000Genomes | |
| tmp_1_27964099_A_C | 49 | L>F | No | 1000Genomes | |
| ENSVATH13807598 | 49 | L>V | No | 1000Genomes | |
| ENSVATH00142638 | 73 | V>A | No | 1000Genomes | |
| ENSVATH13807599 | 74 | S>L | No | 1000Genomes | |
| ENSVATH00142639 | 82 | L>F | No | 1000Genomes | |
| ENSVATH05144150 | 109 | F>L | No | 1000Genomes | |
| tmp_1_27964298_G_C | 116 | V>L | No | 1000Genomes | |
| ENSVATH05144151 | 118 | Y>D | No | 1000Genomes | |
| ENSVATH05144152 | 122 | V>L | No | 1000Genomes | |
| ENSVATH13807607 | 128 | E>D | No | 1000Genomes | |
| tmp_1_27964393_C_A | 147 | N>K | No | 1000Genomes | |
| tmp_1_27964398_T_A | 149 | V>E | No | 1000Genomes | |
| ENSVATH05144153 | 160 | A>E | No | 1000Genomes | |
| ENSVATH05144154 | 161 | E>V | No | 1000Genomes | |
| ENSVATH05144155 | 162 | K>N | No | 1000Genomes | |
| tmp_1_27964437_A_G | 162 | K>R | No | 1000Genomes | |
| ENSVATH05144156 | 163 | I>T | No | 1000Genomes | |
| tmp_1_27964442_G_A | 164 | E>K | No | 1000Genomes | |
| tmp_1_27964446_T_G | 165 | L>R | No | 1000Genomes | |
| ENSVATH00142640 | 167 | G>E | No | 1000Genomes | |
| tmp_1_27964507_G_T | 185 | M>I | No | 1000Genomes | |
| tmp_1_27964515_A_G | 188 | E>G | No | 1000Genomes | |
| tmp_1_27964514_G_C | 188 | E>Q | No | 1000Genomes | |
| tmp_1_27964553_G_A | 201 | A>T | No | 1000Genomes | |
| ENSVATH00142641 | 202 | M>T | No | 1000Genomes | |
| ENSVATH13807608 | 207 | R>T | No | 1000Genomes | |
| tmp_1_27964595_G_A | 215 | V>M | No | 1000Genomes | |
| ENSVATH05144166 | 220 | T>I | No | 1000Genomes | |
| ENSVATH05144167 | 228 | D>A | No | 1000Genomes | |
| ENSVATH05144169 | 230 | S>R | No | 1000Genomes | |
| ENSVATH05144168 | 230 | S>T | No | 1000Genomes | |
| ENSVATH01535359 | 242 | I>F | No | 1000Genomes | |
| ENSVATH13807609 | 245 | Y>N | No | 1000Genomes | |
| tmp_1_27964710_A_T | 253 | E>V | No | 1000Genomes | |
| ENSVATH05144170 | 269 | D>N | No | 1000Genomes | |
| tmp_1_27964766_A_G | 272 | I>V | No | 1000Genomes | |
| ENSVATH05144172 | 282 | V>I | No | 1000Genomes | |
| tmp_1_27964799_T_A | 283 | L>M | No | 1000Genomes | |
| tmp_1_27964809_G_A | 286 | C>Y | No | 1000Genomes | |
| ENSVATH05144174 | 290 | G>A | No | 1000Genomes | |
| tmp_1_27964839_A_T | 296 | K>I | No | 1000Genomes | |
| ENSVATH13807610 | 309 | K>I | No | 1000Genomes | |
| tmp_1_27964928_G_A | 326 | G>S | No | 1000Genomes | |
| ENSVATH13807611 | 331 | A>V | No | 1000Genomes | |
| ENSVATH05144177 | 353 | A>V | No | 1000Genomes | |
| tmp_1_27965016_G_T | 355 | S>I | No | 1000Genomes | |
| ENSVATH00142642 | 363 | G>R | No | 1000Genomes | |
| ENSVATH13807614 | 366 | V>F | No | 1000Genomes | |
| ENSVATH05144179 | 403 | R>H | No | 1000Genomes | |
| ENSVATH05144180 | 409 | M>V | No | 1000Genomes | |
| tmp_1_27965187_A_G | 412 | K>R | No | 1000Genomes | |
| ENSVATH13807616 | 422 | N>T | No | 1000Genomes | |
| ENSVATH13807617 | 424 | F>L | No | 1000Genomes | |
| ENSVATH13807618 | 442 | E>V | No | 1000Genomes | |
| ENSVATH14478790 | 460 | K>Q | No | 1000Genomes | |
| tmp_1_27965335_A_T | 461 | K>N | No | 1000Genomes | |
| tmp_1_27965336_A_C | 462 | M>L | No | 1000Genomes | |
| ENSVATH13807621 | 463 | M>S | No | 1000Genomes |
No associated diseases with Q9CA73
6 regional properties for Q9CA73
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | Pentatricopeptide repeat | 131 - 166 | IPR002885-1 |
| repeat | Pentatricopeptide repeat | 203 - 234 | IPR002885-2 |
| repeat | Pentatricopeptide repeat | 234 - 268 | IPR002885-3 |
| repeat | Pentatricopeptide repeat | 277 - 303 | IPR002885-4 |
| repeat | Pentatricopeptide repeat | 315 - 338 | IPR002885-5 |
| repeat | E motif | 357 - 416 | IPR046848 |
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
25 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9C7F1 | At1g28020 | Putative pentatricopeptide repeat-containing protein At1g28020 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C545 | At1g43010 | Putative pentatricopeptide repeat-containing protein At1g43010 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3ECH5 | At1g66345 | Pentatricopeptide repeat-containing protein At1g66345, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GW57 | At1g80150 | Pentatricopeptide repeat-containing protein At1g80150, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q56XX3 | At2g02148 | Uncharacterized protein At2g02148 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0C894 | At2g02150 | Putative pentatricopeptide repeat-containing protein At2g02150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9ZU67 | At2g18520 | Pentatricopeptide repeat-containing protein At2g18520, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8S8Q7 | PCMP-H25 | Pentatricopeptide repeat-containing protein At2g34370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L6Y7 | At2g38420 | Pentatricopeptide repeat-containing protein At2g38420, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M891 | At3g02490 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LK58 | At3g13150 | Pentatricopeptide repeat-containing protein At3g13150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M2C8 | At3g61360 | Pentatricopeptide repeat-containing protein At3g61360 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZP3 | At3g62470 | Pentatricopeptide repeat-containing protein At3g62470, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3EAF8 | At3g62540 | Pentatricopeptide repeat-containing protein At3g62540, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L838 | COG4 | Conserved oligomeric Golgi complex subunit 4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M4P3 | DYW10 | Pentatricopeptide repeat-containing protein At4g16835, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SVH3 | At4g20740 | Pentatricopeptide repeat-containing protein At4g20740 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O49711 | At4g21880 | Pentatricopeptide repeat-containing protein At4g21880, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SZL5 | At4g38150 | Pentatricopeptide repeat-containing protein At4g38150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZ19 | PCMP-H16 | Pentatricopeptide repeat-containing protein At5g04780, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LEQ7 | At5g14820 | Pentatricopeptide repeat-containing protein At5g14820, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LFQ4 | At5g15010 | Pentatricopeptide repeat-containing protein At5g15010, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LXF4 | At5g15280 | Pentatricopeptide repeat-containing protein At5g15280, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FLJ6 | At5g61370 | Pentatricopeptide repeat-containing protein At5g61370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FJY7 | PCMP-H61 | Pentatricopeptide repeat-containing protein At5g66520 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MRFILRHLHS | LGVINKFDSF | LLHFHTKSLK | SNHTLKQYLE | SGEPIKALLD | FRHRFRQSPS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| FVDSFSVLFA | IKVSSAQKAS | SLDGRQIHAL | VRKLGFNAVI | QIQTSLVGFY | SSVGDVDYAR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| QVFDETPEKQ | NIVLWTAMIS | AYTENENSVE | AIELFKRMEA | EKIELDGVIV | TVALSACADL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| GAVQMGEEIY | SRSIKRKRRL | AMDLTLRNSL | LNMYVKSGET | EKARKLFDES | MRKDVTTYTS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| MIFGYALNGQ | AQESLELFKK | MKTIDQSQDT | VITPNDVTFI | GVLMACSHSG | LVEEGKRHFK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SMIMDYNLKP | REAHFGCMVD | LFCRSGHLKD | AHEFINQMPI | KPNTVIWRTL | LGACSLHGNV |
| 370 | 380 | 390 | 400 | 410 | 420 |
| ELGEEVQRRI | FELDRDHVGD | YVALSNIYAS | KGMWDEKSKM | RDRVRKRRMP | GKSWIELGSI |
| 430 | 440 | 450 | 460 | ||
| INEFVSGPDN | NDEQLMMGEI | SEVLRCLVSC | MTSFDCVIGK | KM |