Q9FLJ6
PR
Gene name |
At5g61370 (MFB13.15) |
Protein name |
Pentatricopeptide repeat-containing protein At5g61370, mitochondrial |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G61370 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9FLJ6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9FLJ6-F1 | Predicted | AlphaFoldDB |
36 variants for Q9FLJ6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_5_24673443_C_A | 10 | R>M | No | 1000Genomes | |
| tmp_5_24673425_C_A | 16 | S>I | No | 1000Genomes | |
| tmp_5_24673422_G_C | 17 | T>S | No | 1000Genomes | |
| tmp_5_24673419_G_C | 18 | A>G | No | 1000Genomes | |
| tmp_5_24673408_G_T | 22 | R>S | No | 1000Genomes | |
| ENSVATH12892174 | 23 | Y>S | No | 1000Genomes | |
| ENSVATH00746416 | 30 | V>G | No | 1000Genomes | |
| tmp_5_24673371_T_G | 34 | E>A | No | 1000Genomes | |
| ENSVATH03461030 | 36 | A>E | No | 1000Genomes | |
| tmp_5_24673366_C_T | 36 | A>T | No | 1000Genomes | |
| tmp_5_24673279_G_A | 65 | P>S | No | 1000Genomes | |
| tmp_5_24673132_C_A | 114 | A>S | No | 1000Genomes | |
| ENSVATH00746414 | 151 | V>I | No | 1000Genomes | |
| tmp_5_24672948_G_A | 175 | T>I | No | 1000Genomes | |
| tmp_5_24672927_G_A | 182 | A>V | No | 1000Genomes | |
| tmp_5_24672910_G_T | 188 | H>N | No | 1000Genomes | |
| ENSVATH07460959 | 239 | I>V | No | 1000Genomes | |
| ENSVATH00746412 | 248 | S>L | No | 1000Genomes | |
| ENSVATH07460958 | 253 | L>H | No | 1000Genomes | |
| ENSVATH07460957 | 260 | R>Q | No | 1000Genomes | |
| tmp_5_24672689_G_T | 261 | N>K | No | 1000Genomes | |
| tmp_5_24672690_T_C | 261 | N>S | No | 1000Genomes | |
| ENSVATH12892172 | 271 | N>H | No | 1000Genomes | |
| tmp_5_24672579_G_C | 298 | T>S | No | 1000Genomes | |
| ENSVATH12892171 | 315 | G>R | No | 1000Genomes | |
| ENSVATH00746411 | 316 | C>Y | No | 1000Genomes | |
| tmp_5_24672388_T_C | 362 | I>V | No | 1000Genomes | |
| ENSVATH14643905 | 370 | R>Q | No | 1000Genomes | |
| ENSVATH03461028 | 373 | F>Y | No | 1000Genomes | |
| tmp_5_24672235_A_G | 413 | W>R | No | 1000Genomes | |
| tmp_5_24672141_T_A | 444 | K>I | No | 1000Genomes | |
| ENSVATH03461026 | 453 | R>C | No | 1000Genomes | |
| tmp_5_24672098_C_A | 458 | K>N | No | 1000Genomes | |
| tmp_5_24672085_T_C | 463 | M>V | No | 1000Genomes | |
| ENSVATH07460951 | 476 | R>C | No | 1000Genomes | |
| ENSVATH07460950 | 488 | H>R | No | 1000Genomes |
No associated diseases with Q9FLJ6
4 regional properties for Q9FLJ6
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | Pentatricopeptide repeat | 174 - 196 | IPR002885-1 |
| repeat | Pentatricopeptide repeat | 207 - 252 | IPR002885-2 |
| repeat | Pentatricopeptide repeat | 283 - 353 | IPR002885-3 |
| repeat | Pentatricopeptide repeat | 361 - 385 | IPR002885-4 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
25 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9C7F1 | At1g28020 | Putative pentatricopeptide repeat-containing protein At1g28020 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C545 | At1g43010 | Putative pentatricopeptide repeat-containing protein At1g43010 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3ECH5 | At1g66345 | Pentatricopeptide repeat-containing protein At1g66345, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9CA73 | PCMP-E68 | Putative pentatricopeptide repeat-containing protein At1g74400 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GW57 | At1g80150 | Pentatricopeptide repeat-containing protein At1g80150, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q56XX3 | At2g02148 | Uncharacterized protein At2g02148 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0C894 | At2g02150 | Putative pentatricopeptide repeat-containing protein At2g02150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9ZU67 | At2g18520 | Pentatricopeptide repeat-containing protein At2g18520, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8S8Q7 | PCMP-H25 | Pentatricopeptide repeat-containing protein At2g34370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L6Y7 | At2g38420 | Pentatricopeptide repeat-containing protein At2g38420, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M891 | At3g02490 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LK58 | At3g13150 | Pentatricopeptide repeat-containing protein At3g13150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M2C8 | At3g61360 | Pentatricopeptide repeat-containing protein At3g61360 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZP3 | At3g62470 | Pentatricopeptide repeat-containing protein At3g62470, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3EAF8 | At3g62540 | Pentatricopeptide repeat-containing protein At3g62540, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L838 | COG4 | Conserved oligomeric Golgi complex subunit 4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M4P3 | DYW10 | Pentatricopeptide repeat-containing protein At4g16835, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SVH3 | At4g20740 | Pentatricopeptide repeat-containing protein At4g20740 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O49711 | At4g21880 | Pentatricopeptide repeat-containing protein At4g21880, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SZL5 | At4g38150 | Pentatricopeptide repeat-containing protein At4g38150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZ19 | PCMP-H16 | Pentatricopeptide repeat-containing protein At5g04780, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LEQ7 | At5g14820 | Pentatricopeptide repeat-containing protein At5g14820, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LFQ4 | At5g15010 | Pentatricopeptide repeat-containing protein At5g15010, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LXF4 | At5g15280 | Pentatricopeptide repeat-containing protein At5g15280, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FJY7 | PCMP-H61 | Pentatricopeptide repeat-containing protein At5g66520 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MMSTTVRLNR | FTYLTSTAKL | TRYFCSHHLV | DRSETALHEV | IRIVSSPVGG | LDDLEENLNQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| VSVSPSSNLV | TQVIESCKNE | TSPRRLLRFF | SWSCKSLGSS | LHDKEFNYVL | RVLAEKKDHT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| AMQILLSDLR | KENRAMDKQT | FSIVAETLVK | VGKEEDAIGI | FKILDKFSCP | QDGFTVTAII |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SALCSRGHVK | RALGVMHHHK | DVISGNELSV | YRSLLFGWSV | QRNVKEARRV | IQDMKSAGIT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| PDLFCFNSLL | TCLCERNVNR | NPSGLVPEAL | NIMLEMRSYK | IQPTSMSYNI | LLSCLGRTRR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| VRESCQILEQ | MKRSGCDPDT | GSYYFVVRVL | YLTGRFGKGN | QIVDEMIERG | FRPERKFYYD |
| 370 | 380 | 390 | 400 | 410 | 420 |
| LIGVLCGVER | VNFALQLFEK | MKRSSVGGYG | QVYDLLIPKL | CKGGNFEKGR | ELWEEALSID |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VTLSCSISLL | DPSVTEVFKP | MKMKEEAAMV | DRRALNLKIH | ARMNKTKPKL | KLKPKRRSKT |
| KKKNLQH |