Q9LZP3
PR
Gene name |
At3g62470 (T12C14_170) |
Protein name |
Pentatricopeptide repeat-containing protein At3g62470, mitochondrial |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G62470 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LZP3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LZP3-F1 | Predicted | AlphaFoldDB |
20 variants for Q9LZP3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH12884589 | 8 | H>Y | No | 1000Genomes | |
| tmp_3_23108330_G_A | 24 | L>F | No | 1000Genomes | |
| ENSVATH14469448 | 26 | C>F | No | 1000Genomes | |
| ENSVATH12884512 | 337 | N>S | No | 1000Genomes | |
| ENSVATH06360542 | 465 | I>T | No | 1000Genomes | |
| tmp_3_23106998_C_G | 468 | E>Q | No | 1000Genomes | |
| tmp_3_23106986_A_G | 472 | S>P | No | 1000Genomes | |
| ENSVATH14469431 | 485 | M>L | No | 1000Genomes | |
| ENSVATH14469431 | 485 | M>V | No | 1000Genomes | |
| tmp_3_23106940_C_G | 487 | R>T | No | 1000Genomes | |
| ENSVATH12884488 | 497 | E>D | No | 1000Genomes | |
| tmp_3_23106895_T_C | 502 | K>R | No | 1000Genomes | |
| ENSVATH06360541 | 504 | I>F | No | 1000Genomes | |
| ENSVATH00432477 | 520 | G>S | No | 1000Genomes | |
| tmp_3_23106838_T_C | 521 | E>G | No | 1000Genomes | |
| tmp_3_23106820_G_T | 527 | A>E | No | 1000Genomes | |
| ENSVATH12884487 | 530 | Y>* | No | 1000Genomes | |
| ENSVATH14469429 | 559 | P>Q | No | 1000Genomes | |
| ENSVATH12884463 | 585 | A>T | No | 1000Genomes | |
| tmp_3_23106611_T_A | 597 | M>L | No | 1000Genomes |
No associated diseases with Q9LZP3
10 regional properties for Q9LZP3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | Pentatricopeptide repeat | 194 - 228 | IPR002885-1 |
| repeat | Pentatricopeptide repeat | 231 - 262 | IPR002885-2 |
| repeat | Pentatricopeptide repeat | 267 - 293 | IPR002885-3 |
| repeat | Pentatricopeptide repeat | 297 - 333 | IPR002885-4 |
| repeat | Pentatricopeptide repeat | 331 - 403 | IPR002885-5 |
| repeat | Pentatricopeptide repeat | 402 - 437 | IPR002885-6 |
| repeat | Pentatricopeptide repeat | 437 - 472 | IPR002885-7 |
| repeat | Pentatricopeptide repeat | 472 - 507 | IPR002885-8 |
| repeat | Pentatricopeptide repeat | 507 - 541 | IPR002885-9 |
| domain | Pentacotripeptide-repeat region of PRORP | 416 - 536 | IPR033443 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
25 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9C7F1 | At1g28020 | Putative pentatricopeptide repeat-containing protein At1g28020 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C545 | At1g43010 | Putative pentatricopeptide repeat-containing protein At1g43010 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3ECH5 | At1g66345 | Pentatricopeptide repeat-containing protein At1g66345, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9CA73 | PCMP-E68 | Putative pentatricopeptide repeat-containing protein At1g74400 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GW57 | At1g80150 | Pentatricopeptide repeat-containing protein At1g80150, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q56XX3 | At2g02148 | Uncharacterized protein At2g02148 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0C894 | At2g02150 | Putative pentatricopeptide repeat-containing protein At2g02150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9ZU67 | At2g18520 | Pentatricopeptide repeat-containing protein At2g18520, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8S8Q7 | PCMP-H25 | Pentatricopeptide repeat-containing protein At2g34370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L6Y7 | At2g38420 | Pentatricopeptide repeat-containing protein At2g38420, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M891 | At3g02490 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LK58 | At3g13150 | Pentatricopeptide repeat-containing protein At3g13150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M2C8 | At3g61360 | Pentatricopeptide repeat-containing protein At3g61360 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L838 | COG4 | Conserved oligomeric Golgi complex subunit 4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M4P3 | DYW10 | Pentatricopeptide repeat-containing protein At4g16835, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SVH3 | At4g20740 | Pentatricopeptide repeat-containing protein At4g20740 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O49711 | At4g21880 | Pentatricopeptide repeat-containing protein At4g21880, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SZL5 | At4g38150 | Pentatricopeptide repeat-containing protein At4g38150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZ19 | PCMP-H16 | Pentatricopeptide repeat-containing protein At5g04780, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LFQ4 | At5g15010 | Pentatricopeptide repeat-containing protein At5g15010, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FLJ6 | At5g61370 | Pentatricopeptide repeat-containing protein At5g61370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FJY7 | PCMP-H61 | Pentatricopeptide repeat-containing protein At5g66520 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3EAF8 | At3g62540 | Pentatricopeptide repeat-containing protein At3g62540, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LEQ7 | At5g14820 | Pentatricopeptide repeat-containing protein At5g14820, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LXF4 | At5g15280 | Pentatricopeptide repeat-containing protein At5g15280, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAAAPWLHLS | RRRSSTQTSL | RSFLICSSSF | DSDEFISSQS | RVIGGRGEEE | VRFSGALFSR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| MIHSSTYHPY | RQIPLPHSSV | QLLDASLGCR | GFSSGSSNVS | DGCDEEVESE | CDNDEETGVS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| CVESSTNPEE | VERVCKVIDE | LFALDRNMEA | VLDEMKLDLS | HDLIVEVLER | FRHARKPAFR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| FFCWAAERQG | FAHDSRTYNS | MMSILAKTRQ | FETMVSVLEE | MGTKGLLTME | TFTIAMKAFA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| AAKERKKAVG | IFELMKKYKF | KIGVETINCL | LDSLGRAKLG | KEAQVLFDKL | KERFTPNMMT |
| 310 | 320 | 330 | 340 | 350 | 360 |
| YTVLLNGWCR | VRNLIEAARI | WNDMIDQGLK | PDIVAHNVML | EGLLRSRKKS | DAIKLFHVMK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| SKGPCPNVRS | YTIMIRDFCK | QSSMETAIEY | FDDMVDSGLQ | PDAAVYTCLI | TGFGTQKKLD |
| 430 | 440 | 450 | 460 | 470 | 480 |
| TVYELLKEMQ | EKGHPPDGKT | YNALIKLMAN | QKMPEHATRI | YNKMIQNEIE | PSIHTFNMIM |
| 490 | 500 | 510 | 520 | 530 | 540 |
| KSYFMARNYE | MGRAVWEEMI | KKGICPDDNS | YTVLIRGLIG | EGKSREACRY | LEEMLDKGMK |
| 550 | 560 | 570 | 580 | 590 | |
| TPLIDYNKFA | ADFHRGGQPE | IFEELAQRAK | FSGKFAAAEI | FARWAQMTRR | RFKQRFMED |