Q8L6Y7
PR
Gene name |
At2g38420 (T19C21.9) |
Protein name |
Pentatricopeptide repeat-containing protein At2g38420, mitochondrial |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT2G38420 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8L6Y7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8L6Y7-F1 | Predicted | AlphaFoldDB |
41 variants for Q8L6Y7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_2_16091175_A_T | 28 | K>I | No | 1000Genomes | |
| tmp_2_16091183_G_A | 31 | E>K | No | 1000Genomes | |
| ENSVATH14595918 | 45 | N>K | No | 1000Genomes | |
| ENSVATH05678216 | 46 | L>F | No | 1000Genomes | |
| ENSVATH00264654 | 48 | T>A | No | 1000Genomes | |
| tmp_2_16091260_G_A | 56 | M>I | No | 1000Genomes | |
| tmp_2_16091324_G_C | 78 | V>L | No | 1000Genomes | |
| tmp_2_16091334_C_A | 81 | T>N | No | 1000Genomes | |
| ENSVATH01964960 | 84 | K>I | No | 1000Genomes | |
| tmp_2_16091394_C_A | 101 | S>Y | No | 1000Genomes | |
| tmp_2_16091404_C_A | 104 | F>L | No | 1000Genomes | |
| ENSVATH13572954 | 143 | A>S | No | 1000Genomes | |
| ENSVATH05678218 | 143 | A>V | No | 1000Genomes | |
| tmp_2_16091595_T_G | 168 | V>G | No | 1000Genomes | |
| tmp_2_16091604_G_C | 171 | C>S | No | 1000Genomes | |
| tmp_2_16091615_G_A | 175 | V>I | No | 1000Genomes | |
| ENSVATH05678220 | 178 | E>K | No | 1000Genomes | |
| tmp_2_16091651_G_T | 187 | D>Y | No | 1000Genomes | |
| ENSVATH14595919 | 214 | P>S | No | 1000Genomes | |
| tmp_2_16091792_G_T | 234 | D>Y | No | 1000Genomes | |
| ENSVATH05678222 | 244 | K>E | No | 1000Genomes | |
| ENSVATH13572976 | 248 | S>L | No | 1000Genomes | |
| tmp_2_16091855_A_G | 255 | T>A | No | 1000Genomes | |
| tmp_2_16091861_G_T | 257 | V>L | No | 1000Genomes | |
| tmp_2_16091864_A_G | 258 | M>V | No | 1000Genomes | |
| ENSVATH00264657 | 286 | L>V | No | 1000Genomes | |
| ENSVATH00264658 | 292 | V>M | No | 1000Genomes | |
| tmp_2_16091993_G_A | 301 | D>N | No | 1000Genomes | |
| ENSVATH05678224 | 306 | D>E | No | 1000Genomes | |
| tmp_2_16092132_T_A | 347 | M>K | No | 1000Genomes | |
| ENSVATH13572977 | 353 | E>D | No | 1000Genomes | |
| ENSVATH01964961 | 375 | A>V | No | 1000Genomes | |
| ENSVATH01964962 | 377 | T>I | No | 1000Genomes | |
| ENSVATH00264660 | 383 | E>K | No | 1000Genomes | |
| tmp_2_16092333_T_C | 414 | L>S | No | 1000Genomes | |
| ENSVATH01964963 | 416 | E>K | No | 1000Genomes | |
| ENSVATH01964964 | 431 | E>K | No | 1000Genomes | |
| ENSVATH05678226 | 435 | R>K | No | 1000Genomes | |
| tmp_2_16092411_G_T | 440 | G>V | No | 1000Genomes | |
| ENSVATH05678227 | 444 | Q>E | No | 1000Genomes | |
| ENSVATH13572978 | 450 | A>E | No | 1000Genomes |
No associated diseases with Q8L6Y7
4 regional properties for Q8L6Y7
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | Pentatricopeptide repeat | 114 - 136 | IPR002885-1 |
| repeat | Pentatricopeptide repeat | 174 - 213 | IPR002885-2 |
| repeat | Pentatricopeptide repeat | 240 - 319 | IPR002885-3 |
| repeat | Pentatricopeptide repeat | 319 - 390 | IPR002885-4 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
25 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9C7F1 | At1g28020 | Putative pentatricopeptide repeat-containing protein At1g28020 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C545 | At1g43010 | Putative pentatricopeptide repeat-containing protein At1g43010 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3ECH5 | At1g66345 | Pentatricopeptide repeat-containing protein At1g66345, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9CA73 | PCMP-E68 | Putative pentatricopeptide repeat-containing protein At1g74400 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q56XX3 | At2g02148 | Uncharacterized protein At2g02148 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0C894 | At2g02150 | Putative pentatricopeptide repeat-containing protein At2g02150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8S8Q7 | PCMP-H25 | Pentatricopeptide repeat-containing protein At2g34370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M891 | At3g02490 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LK58 | At3g13150 | Pentatricopeptide repeat-containing protein At3g13150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M2C8 | At3g61360 | Pentatricopeptide repeat-containing protein At3g61360 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZP3 | At3g62470 | Pentatricopeptide repeat-containing protein At3g62470, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3EAF8 | At3g62540 | Pentatricopeptide repeat-containing protein At3g62540, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L838 | COG4 | Conserved oligomeric Golgi complex subunit 4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M4P3 | DYW10 | Pentatricopeptide repeat-containing protein At4g16835, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SVH3 | At4g20740 | Pentatricopeptide repeat-containing protein At4g20740 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O49711 | At4g21880 | Pentatricopeptide repeat-containing protein At4g21880, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SZL5 | At4g38150 | Pentatricopeptide repeat-containing protein At4g38150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZ19 | PCMP-H16 | Pentatricopeptide repeat-containing protein At5g04780, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LEQ7 | At5g14820 | Pentatricopeptide repeat-containing protein At5g14820, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LFQ4 | At5g15010 | Pentatricopeptide repeat-containing protein At5g15010, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LXF4 | At5g15280 | Pentatricopeptide repeat-containing protein At5g15280, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FLJ6 | At5g61370 | Pentatricopeptide repeat-containing protein At5g61370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FJY7 | PCMP-H61 | Pentatricopeptide repeat-containing protein At5g66520 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GW57 | At1g80150 | Pentatricopeptide repeat-containing protein At1g80150, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9ZU67 | At2g18520 | Pentatricopeptide repeat-containing protein At2g18520, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MARSSSWHRM | SNFMRKYRKI | PHSSFKTKWN | ENLKQKYAME | ELRSNLLTDS | ENASVMRTLL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SSFQLHNCEP | TPQAYRFVIK | TLAKSSQLEN | ISSVLYHLEV | SEKFDTPESI | FRDVIAAYGF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SGRIEEAIEV | FFKIPNFRCV | PSAYTLNALL | LVLVRKRQSL | ELVPEILVKA | CRMGVRLEES |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TFGILIDALC | RIGEVDCATE | LVRYMSQDSV | IVDPRLYSRL | LSSVCKHKDS | SCFDVIGYLE |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DLRKTRFSPG | LRDYTVVMRF | LVEGGRGKEV | VSVLNQMKCD | RVEPDLVCYT | IVLQGVIADE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| DYPKADKLFD | ELLLLGLAPD | VYTYNVYING | LCKQNDIEGA | LKMMSSMNKL | GSEPNVVTYN |
| 370 | 380 | 390 | 400 | 410 | 420 |
| ILIKALVKAG | DLSRAKTLWK | EMETNGVNRN | SHTFDIMISA | YIEVDEVVCA | HGLLEEAFNM |
| 430 | 440 | 450 | |||
| NVFVKSSRIE | EVISRLCEKG | LMDQAVELLA | HLV |