Q9LK58

PR
Gene name
At3g13150 (MJG19.10)
Protein name
Pentatricopeptide repeat-containing protein At3g13150
Names
Species
Arabidopsis thaliana (Mouse-ear cress)
KEGG Pathway
ath:AT3G13150
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

399-551 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q9LK58

Entry ID Method Resolution Chain Position Source
AF-Q9LK58-F1 Predicted AlphaFoldDB

55 variants for Q9LK58

Variant ID(s) Position Change Description Diseaes Association Provenance
ENSVATH02138782 14 G>R No 1000Genomes
ENSVATH05819976 23 T>N No 1000Genomes
ENSVATH10645316 23 T>S No 1000Genomes
tmp_3_4229557_T_C 25 K>R No 1000Genomes
tmp_3_4229551_G_C 27 A>G No 1000Genomes
tmp_3_4229524_G_T 36 T>N No 1000Genomes
ENSVATH05819974 42 L>S No 1000Genomes
tmp_3_4229494_G_A 46 T>I No 1000Genomes
tmp_3_4229489_A_T 48 S>T No 1000Genomes
ENSVATH05819973 50 G>E No 1000Genomes
ENSVATH13907963 60 K>R No 1000Genomes
ENSVATH00320438 100 A>S No 1000Genomes
ENSVATH10645294 104 S>T No 1000Genomes
ENSVATH13907962 107 D>E No 1000Genomes
ENSVATH02138781 111 Q>L No 1000Genomes
tmp_3_4229282_C_T 117 D>N No 1000Genomes
tmp_3_4229190_T_G 147 E>D No 1000Genomes
tmp_3_4229081_G_C 184 P>A No 1000Genomes
tmp_3_4229059_G_A 191 P>L No 1000Genomes
tmp_3_4229000_C_T 211 D>N No 1000Genomes
ENSVATH10645292 269 R>K No 1000Genomes
ENSVATH05819969 273 L>V No 1000Genomes
ENSVATH13907960 291 T>I No 1000Genomes
ENSVATH05819968 293 G>R No 1000Genomes
tmp_3_4228724_C_T 303 A>T No 1000Genomes
ENSVATH00320436 330 T>N No 1000Genomes
ENSVATH02138780 358 E>A No 1000Genomes
ENSVATH00320434 361 K>R No 1000Genomes
ENSVATH02138779 371 Y>F No 1000Genomes
ENSVATH02138778 377 R>C No 1000Genomes
ENSVATH00320433 382 G>D No 1000Genomes
tmp_3_4228430_G_A 401 R>W No 1000Genomes
tmp_3_4228373_A_T 420 S>T No 1000Genomes
tmp_3_4228367_C_G 422 A>P No 1000Genomes
tmp_3_4228336_C_T 432 S>N No 1000Genomes
tmp_3_4228290_G_T 447 D>E No 1000Genomes
tmp_3_4228288_G_A 448 S>F No 1000Genomes
ENSVATH10645288 452 D>N No 1000Genomes
ENSVATH10645286 454 D>N No 1000Genomes
ENSVATH10645261 464 V>D No 1000Genomes
tmp_3_4228222_G_A 470 S>F No 1000Genomes
tmp_3_4228201_C_A 477 S>I No 1000Genomes
tmp_3_4228199_G_C 478 P>A No 1000Genomes
ENSVATH02138775 487 S>C No 1000Genomes
ENSVATH02138775
tmp_3_4228170_A_C
 487 S>R No 1000Genomes
ENSVATH10645257 494 V>D No 1000Genomes
ENSVATH05819960 503 R>W No 1000Genomes
ENSVATH00320432 504 E>Q No 1000Genomes
ENSVATH00320431 509 P>T No 1000Genomes
ENSVATH02138774 513 N>S No 1000Genomes
ENSVATH10645256 514 S>L No 1000Genomes
ENSVATH10645255 517 S>L No 1000Genomes
ENSVATH13907956 519 L>S No 1000Genomes
ENSVATH10645224 522 S>F No 1000Genomes
tmp_3_4228057_A_G 525 V>A No 1000Genomes

No associated diseases with Q9LK58

5 regional properties for Q9LK58

Type Name Position InterPro Accession
repeat Pentatricopeptide repeat 131 - 153 IPR002885-1
repeat Pentatricopeptide repeat 156 - 227 IPR002885-2
repeat Pentatricopeptide repeat 227 - 263 IPR002885-3
repeat Pentatricopeptide repeat 262 - 298 IPR002885-4
repeat Pentatricopeptide repeat 296 - 366 IPR002885-5

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

1 GO annotations of molecular function

Name Definition
mRNA binding Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.

No GO annotations of biological process

Name Definition
No GO annotations for biological process

25 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q9C7F1 At1g28020 Putative pentatricopeptide repeat-containing protein At1g28020 Arabidopsis thaliana (Mouse-ear cress) PR
Q9C545 At1g43010 Putative pentatricopeptide repeat-containing protein At1g43010 Arabidopsis thaliana (Mouse-ear cress) PR
Q3ECH5 At1g66345 Pentatricopeptide repeat-containing protein At1g66345, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q9CA73 PCMP-E68 Putative pentatricopeptide repeat-containing protein At1g74400 Arabidopsis thaliana (Mouse-ear cress) PR
Q8GW57 At1g80150 Pentatricopeptide repeat-containing protein At1g80150, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q56XX3 At2g02148 Uncharacterized protein At2g02148 Arabidopsis thaliana (Mouse-ear cress) PR
P0C894 At2g02150 Putative pentatricopeptide repeat-containing protein At2g02150 Arabidopsis thaliana (Mouse-ear cress) PR
Q9ZU67 At2g18520 Pentatricopeptide repeat-containing protein At2g18520, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q8S8Q7 PCMP-H25 Pentatricopeptide repeat-containing protein At2g34370, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q8L6Y7 At2g38420 Pentatricopeptide repeat-containing protein At2g38420, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q9M891 At3g02490 Pentatricopeptide repeat-containing protein At3g02490, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q9M2C8 At3g61360 Pentatricopeptide repeat-containing protein At3g61360 Arabidopsis thaliana (Mouse-ear cress) PR
Q9LZP3 At3g62470 Pentatricopeptide repeat-containing protein At3g62470, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q3EAF8 At3g62540 Pentatricopeptide repeat-containing protein At3g62540, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q8L838 COG4 Conserved oligomeric Golgi complex subunit 4 Arabidopsis thaliana (Mouse-ear cress) PR
Q9M4P3 DYW10 Pentatricopeptide repeat-containing protein At4g16835, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q9SVH3 At4g20740 Pentatricopeptide repeat-containing protein At4g20740 Arabidopsis thaliana (Mouse-ear cress) PR
O49711 At4g21880 Pentatricopeptide repeat-containing protein At4g21880, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q9SZL5 At4g38150 Pentatricopeptide repeat-containing protein At4g38150 Arabidopsis thaliana (Mouse-ear cress) PR
Q9LZ19 PCMP-H16 Pentatricopeptide repeat-containing protein At5g04780, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q9LEQ7 At5g14820 Pentatricopeptide repeat-containing protein At5g14820, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q9LFQ4 At5g15010 Pentatricopeptide repeat-containing protein At5g15010, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q9LXF4 At5g15280 Pentatricopeptide repeat-containing protein At5g15280, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q9FLJ6 At5g61370 Pentatricopeptide repeat-containing protein At5g61370, mitochondrial Arabidopsis thaliana (Mouse-ear cress) PR
Q9FJY7 PCMP-H61 Pentatricopeptide repeat-containing protein At5g66520 Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MSKVGSSLYS RLHGIFKESS IATAKSAKPR SQTKSTKFPS KLKASTASVG DGGQSSNDAK
70 80 90 100 110 120
DSKNSKLTQK VEKFKRSCES ESFRQVHGLY SAFIRRLREA KKFSTIDEVL QYQKKFDDIK
130 140 150 160 170 180
SEDFVIRIML LYGYSGMAEH AHKLFDEMPE LNCERTVKSF NALLSAYVNS KKLDEAMKTF
190 200 210 220 230 240
KELPEKLGIT PDLVTYNTMI KALCRKGSMD DILSIFEELE KNGFEPDLIS FNTLLEEFYR
250 260 270 280 290 300
RELFVEGDRI WDLMKSKNLS PNIRSYNSRV RGLTRNKKFT DALNLIDVMK TEGISPDVHT
310 320 330 340 350 360
YNALITAYRV DNNLEEVMKC YNEMKEKGLT PDTVTYCMLI PLLCKKGDLD RAVEVSEEAI
370 380 390 400 410 420
KHKLLSRPNM YKPVVERLMG AGKIDEATQL VKNGKLQSYF RYLPDLSAGK KKTTSSPVSS
430 440 450 460 470 480
SAKTTSTPVS SSPDTSSFLL SLSLAADSSS SDSDSSSPDS SSSVSSSPDS SSSVSSSPDS
490 500 510 520 530 540
YSSFSSSPDS SSSVSSSLFS SSRENSSSPD YSNSVSSSLD YSGSVSSSSD YSSSVFPSAN
550
SSSSSSGLLD D