Q9FJY7
PR
Gene name |
PCMP-H61 (At5g66520, K1F13.18) |
Protein name |
Pentatricopeptide repeat-containing protein At5g66520 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G66520 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9FJY7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9FJY7-F1 | Predicted | AlphaFoldDB |
63 variants for Q9FJY7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH15259021 | 7 | S>F | No | 1000Genomes | |
| tmp_5_26551916_A_C | 13 | N>T | No | 1000Genomes | |
| ENSVATH03484241 | 25 | S>L | No | 1000Genomes | |
| ENSVATH07489548 | 43 | M>I | No | 1000Genomes | |
| ENSVATH07489547 | 43 | M>L | No | 1000Genomes | |
| ENSVATH03484243 | 48 | A>V | No | 1000Genomes | |
| ENSVATH07489549 | 51 | K>N | No | 1000Genomes | |
| ENSVATH07489550 | 61 | S>T | No | 1000Genomes | |
| ENSVATH07489551 | 65 | L>F | No | 1000Genomes | |
| ENSVATH07489552 | 66 | P>T | No | 1000Genomes | |
| ENSVATH07489553 | 67 | Y>S | No | 1000Genomes | |
| ENSVATH12953871 | 74 | G>W | No | 1000Genomes | |
| ENSVATH00755490 | 75 | F>C | No | 1000Genomes | |
| ENSVATH07489554 | 82 | L>F | No | 1000Genomes | |
| ENSVATH07489555 | 92 | C>S | No | 1000Genomes | |
| ENSVATH12953872 | 109 | S>C | No | 1000Genomes | |
| tmp_5_26552311_G_C | 145 | G>R | No | 1000Genomes | |
| ENSVATH14651334 | 146 | Y>H | No | 1000Genomes | |
| ENSVATH07489556 | 147 | E>D | No | 1000Genomes | |
| ENSVATH14651335 | 163 | T>I | No | 1000Genomes | |
| tmp_5_26552408_C_G | 177 | P>R | No | 1000Genomes | |
| ENSVATH07489558 | 190 | G>S | No | 1000Genomes | |
| ENSVATH07489559 | 203 | L>I | No | 1000Genomes | |
| tmp_5_26552498_T_C | 207 | M>T | No | 1000Genomes | |
| tmp_5_26552605_G_T | 243 | V>F | No | 1000Genomes | |
| tmp_5_26552620_G_A | 248 | V>I | No | 1000Genomes | |
| ENSVATH03484244 | 274 | N>T | No | 1000Genomes | |
| ENSVATH07489560 | 279 | R>K | No | 1000Genomes | |
| ENSVATH14651337 | 289 | I>L | No | 1000Genomes | |
| ENSVATH03484245 | 303 | E>D | No | 1000Genomes | |
| ENSVATH14651338 | 308 | I>F | No | 1000Genomes | |
| ENSVATH14651339 | 313 | V>M | No | 1000Genomes | |
| ENSVATH12953874 | 327 | G>D | No | 1000Genomes | |
| tmp_5_26552939_T_A | 354 | V>D | No | 1000Genomes | |
| ENSVATH12953906 | 361 | T>A | No | 1000Genomes | |
| ENSVATH03484248 | 365 | E>V | No | 1000Genomes | |
| ENSVATH00755493 | 373 | S>N | No | 1000Genomes | |
| tmp_5_26553040_G_A | 388 | G>S | No | 1000Genomes | |
| ENSVATH12953908 | 408 | Q>H | No | 1000Genomes | |
| ENSVATH14651340 | 417 | V>A | No | 1000Genomes | |
| ENSVATH12953909 | 417 | V>M | No | 1000Genomes | |
| ENSVATH12953910 | 425 | A>T | No | 1000Genomes | |
| tmp_5_26553155_G_A | 426 | C>Y | No | 1000Genomes | |
| tmp_5_26553194_G_T | 439 | G>V | No | 1000Genomes | |
| ENSVATH12953911 | 445 | I>L | No | 1000Genomes | |
| ENSVATH00755494 | 463 | D>G | No | 1000Genomes | |
| ENSVATH12953912 | 481 | V>I | No | 1000Genomes | |
| ENSVATH07489562 | 489 | T>A | No | 1000Genomes | |
| tmp_5_26553367_C_A | 497 | H>N | No | 1000Genomes | |
| ENSVATH12953913 | 498 | E>D | No | 1000Genomes | |
| ENSVATH03484249 | 534 | E>D | No | 1000Genomes | |
| ENSVATH03484250 | 535 | M>I | No | 1000Genomes | |
| ENSVATH07489564 | 536 | L>V | No | 1000Genomes | |
| tmp_5_26553518_C_A | 547 | A>D | No | 1000Genomes | |
| tmp_5_26553544_T_A | 556 | L>M | No | 1000Genomes | |
| ENSVATH07489565 | 563 | I>V | No | 1000Genomes | |
| ENSVATH00755495 | 565 | T>S | No | 1000Genomes | |
| ENSVATH03484251 | 566 | K>E | No | 1000Genomes | |
| tmp_5_26553580_G_A | 568 | G>R | No | 1000Genomes | |
| ENSVATH07489566 | 570 | I>N | No | 1000Genomes | |
| ENSVATH03484252 | 570 | I>V | No | 1000Genomes | |
| tmp_5_26553613_G_A | 579 | V>I | No | 1000Genomes | |
| tmp_5_26553643_C_T | 589 | L>F | No | 1000Genomes |
No associated diseases with Q9FJY7
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| zinc ion binding | Binding to a zinc ion (Zn). |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| chloroplast RNA modification | Any RNA modification that takes place in chloroplast. |
| cytidine to uridine editing | The conversion of a cytosine residue to uridine in an RNA molecule by deamination. |
25 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9C7F1 | At1g28020 | Putative pentatricopeptide repeat-containing protein At1g28020 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C545 | At1g43010 | Putative pentatricopeptide repeat-containing protein At1g43010 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3ECH5 | At1g66345 | Pentatricopeptide repeat-containing protein At1g66345, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9CA73 | PCMP-E68 | Putative pentatricopeptide repeat-containing protein At1g74400 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GW57 | At1g80150 | Pentatricopeptide repeat-containing protein At1g80150, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q56XX3 | At2g02148 | Uncharacterized protein At2g02148 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0C894 | At2g02150 | Putative pentatricopeptide repeat-containing protein At2g02150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9ZU67 | At2g18520 | Pentatricopeptide repeat-containing protein At2g18520, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8S8Q7 | PCMP-H25 | Pentatricopeptide repeat-containing protein At2g34370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L6Y7 | At2g38420 | Pentatricopeptide repeat-containing protein At2g38420, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M891 | At3g02490 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LK58 | At3g13150 | Pentatricopeptide repeat-containing protein At3g13150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M2C8 | At3g61360 | Pentatricopeptide repeat-containing protein At3g61360 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZP3 | At3g62470 | Pentatricopeptide repeat-containing protein At3g62470, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3EAF8 | At3g62540 | Pentatricopeptide repeat-containing protein At3g62540, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L838 | COG4 | Conserved oligomeric Golgi complex subunit 4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SVH3 | At4g20740 | Pentatricopeptide repeat-containing protein At4g20740 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O49711 | At4g21880 | Pentatricopeptide repeat-containing protein At4g21880, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SZL5 | At4g38150 | Pentatricopeptide repeat-containing protein At4g38150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZ19 | PCMP-H16 | Pentatricopeptide repeat-containing protein At5g04780, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LEQ7 | At5g14820 | Pentatricopeptide repeat-containing protein At5g14820, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LFQ4 | At5g15010 | Pentatricopeptide repeat-containing protein At5g15010, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LXF4 | At5g15280 | Pentatricopeptide repeat-containing protein At5g15280, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FLJ6 | At5g61370 | Pentatricopeptide repeat-containing protein At5g61370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M4P3 | DYW10 | Pentatricopeptide repeat-containing protein At4g16835, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MNVISCSFSL | EHNLYETMSC | LQRCSKQEEL | KQIHARMLKT | GLMQDSYAIT | KFLSFCISST |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SSDFLPYAQI | VFDGFDRPDT | FLWNLMIRGF | SCSDEPERSL | LLYQRMLCSS | APHNAYTFPS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LLKACSNLSA | FEETTQIHAQ | ITKLGYENDV | YAVNSLINSY | AVTGNFKLAH | LLFDRIPEPD |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DVSWNSVIKG | YVKAGKMDIA | LTLFRKMAEK | NAISWTTMIS | GYVQADMNKE | ALQLFHEMQN |
| 250 | 260 | 270 | 280 | 290 | 300 |
| SDVEPDNVSL | ANALSACAQL | GALEQGKWIH | SYLNKTRIRM | DSVLGCVLID | MYAKCGEMEE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ALEVFKNIKK | KSVQAWTALI | SGYAYHGHGR | EAISKFMEMQ | KMGIKPNVIT | FTAVLTACSY |
| 370 | 380 | 390 | 400 | 410 | 420 |
| TGLVEEGKLI | FYSMERDYNL | KPTIEHYGCI | VDLLGRAGLL | DEAKRFIQEM | PLKPNAVIWG |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ALLKACRIHK | NIELGEEIGE | ILIAIDPYHG | GRYVHKANIH | AMDKKWDKAA | ETRRLMKEQG |
| 490 | 500 | 510 | 520 | 530 | 540 |
| VAKVPGCSTI | SLEGTTHEFL | AGDRSHPEIE | KIQSKWRIMR | RKLEENGYVP | ELEEMLLDLV |
| 550 | 560 | 570 | 580 | 590 | 600 |
| DDDEREAIVH | QHSEKLAITY | GLIKTKPGTI | IRIMKNLRVC | KDCHKVTKLI | SKIYKRDIVM |
| 610 | |||||
| RDRTRFHHFR | DGKCSCGDYW |