O49711
PR
Gene name |
At4g21880 (T8O5.90) |
Protein name |
Pentatricopeptide repeat-containing protein At4g21880, mitochondrial |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT4G21880 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for O49711
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-O49711-F1 | Predicted | AlphaFoldDB |
71 variants for O49711
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_4_11605199_T_C | 15 | F>S | No | 1000Genomes | |
| ENSVATH02903727 | 28 | A>V | No | 1000Genomes | |
| ENSVATH12125954 | 30 | A>T | No | 1000Genomes | |
| ENSVATH06747606 | 35 | S>Y | No | 1000Genomes | |
| ENSVATH06747607 | 39 | D>E | No | 1000Genomes | |
| tmp_4_11605423_G_T | 65 | G>C | No | 1000Genomes | |
| tmp_4_11605567_G_T | 69 | G>C | No | 1000Genomes | |
| ENSVATH12125996 | 84 | K>T | No | 1000Genomes | |
| tmp_4_11605725_A_G | 89 | N>S | No | 1000Genomes | |
| ENSVATH12125997 | 95 | N>S | No | 1000Genomes | |
| tmp_4_11605760_C_T | 101 | P>S | No | 1000Genomes | |
| ENSVATH06747612 | 104 | V>L | No | 1000Genomes | |
| tmp_4_11605832_T_A | 125 | S>T | No | 1000Genomes | |
| ENSVATH00529665 | 145 | L>F | No | 1000Genomes | |
| ENSVATH14275477 | 169 | A>T | No | 1000Genomes | |
| tmp_4_11605979_T_C | 174 | Y>H | No | 1000Genomes | |
| ENSVATH00529666 | 184 | R>C | No | 1000Genomes | |
| tmp_4_11606013_C_T | 185 | A>V | No | 1000Genomes | |
| ENSVATH14275478 | 204 | H>N | No | 1000Genomes | |
| tmp_4_11606082_T_C | 208 | M>T | No | 1000Genomes | |
| ENSVATH02903736 | 213 | F>I | No | 1000Genomes | |
| tmp_4_11606120_G_A | 221 | G>S | No | 1000Genomes | |
| tmp_4_11606124_C_T | 222 | P>L | No | 1000Genomes | |
| ENSVATH06747613 | 240 | K>N | No | 1000Genomes | |
| tmp_4_11606204_G_A | 249 | E>K | No | 1000Genomes | |
| tmp_4_11606222_G_A | 255 | V>I | No | 1000Genomes | |
| tmp_4_11606243_T_G | 262 | W>G | No | 1000Genomes | |
| ENSVATH12126002 | 267 | D>N | No | 1000Genomes | |
| ENSVATH14275479 | 289 | Q>E | No | 1000Genomes | |
| ENSVATH00529668 | 304 | N>K | No | 1000Genomes | |
| tmp_4_11606494_A_T | 315 | T>S | No | 1000Genomes | |
| tmp_4_11606510_C_T | 320 | P>L | No | 1000Genomes | |
| ENSVATH02903742 | 326 | I>V | No | 1000Genomes | |
| ENSVATH06747615 | 352 | D>Y | No | 1000Genomes | |
| tmp_4_11606855_G_A | 353 | G>R | No | 1000Genomes | |
| ENSVATH06747619 | 354 | V>M | No | 1000Genomes | |
| tmp_4_11607641_G_A | 373 | V>I | No | 1000Genomes | |
| tmp_4_11607717_A_T | 398 | N>I | No | 1000Genomes | |
| tmp_4_11607892_T_A | 427 | S>T | No | 1000Genomes | |
| tmp_4_11607928_G_C | 439 | E>Q | No | 1000Genomes | |
| tmp_4_11608219_A_G | 470 | I>V | No | 1000Genomes | |
| ENSVATH14275556 | 486 | L>V | No | 1000Genomes | |
| ENSVATH12126163 | 487 | G>A | No | 1000Genomes | |
| tmp_4_11608454_A_G | 497 | N>S | No | 1000Genomes | |
| tmp_4_11608493_G_A | 510 | R>Q | No | 1000Genomes | |
| tmp_4_11608851_C_T | 517 | A>V | No | 1000Genomes | |
| ENSVATH06747644 | 525 | K>N | No | 1000Genomes | |
| ENSVATH06747645 | 528 | D>A | No | 1000Genomes | |
| ENSVATH08362259 | 529 | V>I | No | 1000Genomes | |
| tmp_4_11608923_A_G | 541 | N>S | No | 1000Genomes | |
| ENSVATH06747647 | 550 | A>V | No | 1000Genomes | |
| ENSVATH06747650 | 552 | Y>C | No | 1000Genomes | |
| ENSVATH06747651 | 556 | M>I | No | 1000Genomes | |
| tmp_4_11609501_G_A | 632 | V>I | No | 1000Genomes | |
| ENSVATH02903765 | 634 | P>R | No | 1000Genomes | |
| tmp_4_11609662_C_A | 648 | A>E | No | 1000Genomes | |
| tmp_4_11609749_C_T | 677 | A>V | No | 1000Genomes | |
| tmp_4_11609751_G_T | 678 | V>F | No | 1000Genomes | |
| tmp_4_11609770_G_T | 684 | S>I | No | 1000Genomes | |
| tmp_4_11609868_G_A | 688 | D>N | No | 1000Genomes | |
| tmp_4_11609891_C_A | 695 | N>K | No | 1000Genomes | |
| tmp_4_11609916_G_T | 704 | V>L | No | 1000Genomes | |
| ENSVATH12126206 | 715 | I>M | No | 1000Genomes | |
| tmp_4_11610178_G_C | 726 | G>A | No | 1000Genomes | |
| tmp_4_11610219_T_A | 740 | C>S | No | 1000Genomes | |
| tmp_4_11610313_G_T | 771 | C>F | No | 1000Genomes | |
| ENSVATH00529698 | 798 | E>K | No | 1000Genomes | |
| tmp_4_11610521_T_C | 801 | V>A | No | 1000Genomes | |
| tmp_4_11610520_G_T | 801 | V>L | No | 1000Genomes | |
| tmp_4_11610543_T_A | 808 | D>E | No | 1000Genomes | |
| tmp_4_11610544_A_G | 809 | K>E | No | 1000Genomes |
No associated diseases with O49711
3 regional properties for O49711
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | Pentatricopeptide repeat | 496 - 543 | IPR002885-1 |
| repeat | Pentatricopeptide repeat | 567 - 590 | IPR002885-2 |
| repeat | Pentatricopeptide repeat | 598 - 632 | IPR002885-3 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
25 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9C7F1 | At1g28020 | Putative pentatricopeptide repeat-containing protein At1g28020 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C545 | At1g43010 | Putative pentatricopeptide repeat-containing protein At1g43010 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3ECH5 | At1g66345 | Pentatricopeptide repeat-containing protein At1g66345, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9CA73 | PCMP-E68 | Putative pentatricopeptide repeat-containing protein At1g74400 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GW57 | At1g80150 | Pentatricopeptide repeat-containing protein At1g80150, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q56XX3 | At2g02148 | Uncharacterized protein At2g02148 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P0C894 | At2g02150 | Putative pentatricopeptide repeat-containing protein At2g02150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9ZU67 | At2g18520 | Pentatricopeptide repeat-containing protein At2g18520, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8S8Q7 | PCMP-H25 | Pentatricopeptide repeat-containing protein At2g34370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L6Y7 | At2g38420 | Pentatricopeptide repeat-containing protein At2g38420, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M891 | At3g02490 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LK58 | At3g13150 | Pentatricopeptide repeat-containing protein At3g13150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M2C8 | At3g61360 | Pentatricopeptide repeat-containing protein At3g61360 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZP3 | At3g62470 | Pentatricopeptide repeat-containing protein At3g62470, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3EAF8 | At3g62540 | Pentatricopeptide repeat-containing protein At3g62540, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L838 | COG4 | Conserved oligomeric Golgi complex subunit 4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M4P3 | DYW10 | Pentatricopeptide repeat-containing protein At4g16835, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SVH3 | At4g20740 | Pentatricopeptide repeat-containing protein At4g20740 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SZL5 | At4g38150 | Pentatricopeptide repeat-containing protein At4g38150 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LZ19 | PCMP-H16 | Pentatricopeptide repeat-containing protein At5g04780, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LEQ7 | At5g14820 | Pentatricopeptide repeat-containing protein At5g14820, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LFQ4 | At5g15010 | Pentatricopeptide repeat-containing protein At5g15010, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LXF4 | At5g15280 | Pentatricopeptide repeat-containing protein At5g15280, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FLJ6 | At5g61370 | Pentatricopeptide repeat-containing protein At5g61370, mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FJY7 | PCMP-H61 | Pentatricopeptide repeat-containing protein At5g66520 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MALKAKKSLS | AIFRFAMRNA | AKTAEVEAKA | VAGDSLISDT | GPVSMSLIPD | FLSSLKSPED |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SSNIGQDFGE | PALAGQVSSA | LDVKSIGYNL | LRERNGEKVF | PKNVLETLDL | LSRKGCSSQK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PKQASRGRML | TENYQNKQSE | IMEKLAKGCV | RKLGTETMFE | VLTKMGKEAG | EKEYNAMTKL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| CIQRARRSND | AEYALDQIGK | AIEHLKEMRQ | LGFSIGEGAY | GPFFKYLVDM | EMVAEFQILK |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DFIKEACPES | CGRLVYYEML | LWIQVNDEEK | IHKLCNKVDD | SGLSLSILQE | YYLVALCEKD |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SKENFQKLLE | IVDITTVSSP | DALKSIFGYL | GKSLLESVAM | KLLWELRDCR | KDGVETVSNL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| IFSYATCIPN | STVEDAIFKF | NKLHEELDIV | PSSTSYENLV | SYLCGSNEVV | TALDIVENMC |
| 430 | 440 | 450 | 460 | 470 | 480 |
| EAGLVISANI | LHSLLQAIEQ | ILEFNLVQRI | YSIMSNKSVK | PNSETFRKSI | NLCIRIKDFE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| GAYNMLGNLK | NFNLAPNSSM | YNSIMAGYFR | EKKVNSALKV | LKEMKEADVK | PDSVTFSYLI |
| 550 | 560 | 570 | 580 | 590 | 600 |
| NYCGEEATIA | KYYKEMKQAG | VEVNKHVYMS | LVKAYASCGQ | FEKAKQVLMD | LEVPAKDHNE |
| 610 | 620 | 630 | 640 | 650 | 660 |
| LKSVLISALA | SNGNITEALS | IYEEMKKLRC | PVEPKAILSL | IENSDSNAEL | GTLVELTHEL |
| 670 | 680 | 690 | 700 | 710 | 720 |
| RDSKFWIDGF | FKIIVFAVRN | NRSSSILDLL | EQTKNHLSKD | DVGVEYWFEE | VFKSIAETES |
| 730 | 740 | 750 | 760 | 770 | 780 |
| SDVKVGLDLV | SFMKEELELC | PSRKCLDFLL | HACVNAKDKQ | SALLVWEEYQ | CAELPYNVIN |
| 790 | 800 | 810 | 820 | 830 | 840 |
| YLRMYQVLVA | AGDSKSAEAI | VSKIPNDDKD | VKCIIKESRI | VFTPKLKKKK | KKSKQKGLSL |
| QAK |