P02730
Gene name |
SLC4A1 (AE1, DI, EPB3) |
Protein name |
Band 3 anion transport protein |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:6521 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
47 structures for P02730
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 1BH7 | NMR | - | A | 803-835 | PDB |
| 1BNX | NMR | - | A | 389-430 | PDB |
| 1BTQ | NMR | - | A | 405-424 | PDB |
| 1BTR | NMR | - | A | 405-424 | PDB |
| 1BTS | NMR | - | A | 436-456 | PDB |
| 1BTT | NMR | - | A | 436-456 | PDB |
| 1BZK | NMR | - | A | 389-430 | PDB |
| 1HYN | X-ray | 260 A | P/Q/R/S | 1-379 | PDB |
| 2BTA | NMR | - | A | 1-15 | PDB |
| 2BTB | NMR | - | A | 1-15 | PDB |
| 3BTB | NMR | - | A | 1-15 | PDB |
| 4KY9 | X-ray | 223 A | A/P | 51-356 | PDB |
| 4YZF | X-ray | 350 A | A/B/C/D | 1-911 | PDB |
| 7TVZ | EM | 360 A | A/B | 1-911 | PDB |
| 7TW0 | EM | 460 A | A/B | 1-911 | PDB |
| 7TW1 | EM | 460 A | A/B | 1-911 | PDB |
| 7TW2 | EM | 480 A | A/B | 1-911 | PDB |
| 7TW3 | EM | 440 A | A/B | 1-911 | PDB |
| 7TW5 | EM | 570 A | A/B | 1-911 | PDB |
| 7TW6 | EM | 560 A | A/B/J/K | 1-911 | PDB |
| 7TY4 | EM | 299 A | A/B | 1-911 | PDB |
| 7TY6 | EM | 298 A | A/B | 1-911 | PDB |
| 7TY7 | EM | 337 A | A/B | 1-911 | PDB |
| 7TY8 | EM | 318 A | A/B | 1-911 | PDB |
| 7TYA | EM | 307 A | A/B | 1-911 | PDB |
| 7UZ3 | EM | 235 A | C/E | 1-911 | PDB |
| 7UZU | EM | 230 A | W | 1-911 | PDB |
| 7UZV | EM | 250 A | C/E | 1-911 | PDB |
| 7V07 | EM | 280 A | C/E | 1-911 | PDB |
| 7V0K | EM | 240 A | O/P/W | 1-911 | PDB |
| 7V0M | EM | 270 A | W | 1-911 | PDB |
| 7V0T | EM | 270 A | C/E | 1-911 | PDB |
| 7V0U | EM | 300 A | D/F | 1-911 | PDB |
| 7V0Y | EM | 300 A | C/E | 1-911 | PDB |
| 7V19 | EM | 330 A | C/E | 1-911 | PDB |
| 8CRQ | EM | 320 A | C/E | 1-911 | PDB |
| 8CRR | EM | 300 A | C/E | 1-911 | PDB |
| 8CRT | EM | 300 A | C/E | 1-911 | PDB |
| 8CS9 | EM | 274 A | V/Y/Z/e/f/g | 1-911 | PDB |
| 8CSL | EM | 2500 A | V/W/Y/Z/e/f/g | 1-911 | PDB |
| 8CSV | EM | 270 A | W | 1-911 | PDB |
| 8CSY | EM | 270 A | C/E | 1-911 | PDB |
| 8CT3 | EM | 330 A | C/E | 1-911 | PDB |
| 8CTE | EM | 290 A | P/T/W | 1-911 | PDB |
| 8T6U | EM | 313 A | A/B | 369-891 | PDB |
| 8T6V | EM | 295 A | A/B | 369-891 | PDB |
| AF-P02730-F1 | Predicted | AlphaFoldDB |
766 variants for P02730
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV001122076 RCV001122077 CA8600736 rs55773290 RCV001122075 RCV000903910 |
31 | M>T | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
VAR_014612 RCV000370005 RCV000273549 CA8600706 RCV000242676 RCV001509619 RCV000330909 rs5035 |
38 | D>A | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000247655 RCV000494697 CA127375 RCV000298897 RCV000512811 VAR_000798 rs45562031 RCV001127848 RCV000019333 |
40 | E>K | Cryohydrocytosis Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 found in patients with hemolytic anemia; unknown pathological significance; Montefiore [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA210832 rs5036 RCV000260217 RCV000251469 RCV000019328 RCV000989926 RCV001515404 RCV000357412 VAR_000799 |
56 | K>E | Hemolytic anemia Band 3 memphis Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 Di(a)/Memphis-II antigen [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000339556 rs368863744 RCV000392701 CA8600679 RCV000305664 |
58 | Y>C | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA8600670 RCV001850728 RCV000401440 VAR_039290 RCV000345874 rs13306787 RCV000288475 |
68 | E>K | Hemolytic anemia Variant assessed as Somatic; 0.0 impact. Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA8600667 RCV002502252 RCV000949001 rs13306788 RCV000346820 RCV000294205 VAR_058036 RCV000385219 |
72 | E>D | Hemolytic anemia Southeast Asian ovalocytosis Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001125746 rs761763084 RCV001124760 CA8600655 RCV001125745 |
87 | N>K | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinVar dbSNP ClinGen ExAC gnomAD |
|
VAR_013784 rs28929480 RCV000019353 RCV003137536 CA127402 |
90 | E>K | Variant assessed as Somatic; 0.0 impact. Hereditary spherocytosis type 4 SPH4; Cape Town [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000334118 CA8600651 RCV001355054 RCV000386246 RCV000275834 rs538778224 |
96 | R>C | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs2047435499 RCV001124758 RCV001124759 RCV001124757 |
107 | L>F | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001124756 RCV001121982 rs2047435077 RCV001121983 |
115 | T>I | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA127394 RCV001121978 VAR_013785 RCV000019346 rs121912749 |
130 | G>R | Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 SPH4; Fukoka [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
| VAR_013786 | 147 | P>S | SPH4; Mondego [UniProt] | Yes | UniProt |
|
CA127385 rs56361140 RCV002514115 RCV000019339 |
150 | R>* | Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001213064 CA8600598 RCV002504253 rs55840505 |
152 | E>K | Southeast Asian ovalocytosis [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000372661 RCV001812856 RCV000315657 rs145041032 CA8600597 RCV000262760 |
153 | L>M | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA8600562 rs147390654 RCV001127763 RCV000756654 RCV001127764 RCV000253978 RCV001127762 RCV000709888 |
180 | R>H | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001124654 RCV001123585 RCV001124653 CA8600493 rs779054292 |
233 | R>C | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000304240 RCV000391038 RCV000361153 CA10649393 rs779054292 |
233 | R>G | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA8600487 RCV001123584 RCV001123583 rs141605301 RCV001123582 RCV001221611 |
236 | F>V | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001123581 RCV001123580 rs764833865 RCV001123579 CA8600484 |
240 | P>L | Hemolytic anemia Variant assessed as Somatic; 0.0 impact. Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001059827 RCV001123578 RCV001127676 CA8600480 RCV001127677 rs148170067 |
245 | V>M | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001127670 RCV001241221 rs746406399 RCV001127671 CA8600454 RCV001127672 |
276 | I>V | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
| VAR_013787 | 285 | A>D | SPH4; Boston [UniProt] | Yes | UniProt |
|
RCV000350082 RCV000292781 RCV001050523 CA8600428 rs140424071 RCV000401141 |
295 | R>H | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA127374 VAR_000800 RCV001811190 rs28931583 RCV000019332 |
327 | P>R | Hereditary spherocytosis type 4 SPH4; Tuscaloosa [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000019338 CA127383 rs121912742 |
330 | Q>* | Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs750930293 RCV002477748 RCV000760412 CA399788576 COSM979930 |
344 | R>* | large_intestine Southeast Asian ovalocytosis Variant assessed as Somatic; impact. endometrium [Cosmic, ClinVar, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
RCV001124571 CA8600364 rs13306776 RCV001124569 RCV001124570 RCV002558229 |
384 | R>H | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs2047407019 RCV002227254 RCV001197162 |
385 | D>H | Cryohydrocytosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001349281 COSM3402933 RCV002476608 CA8600361 rs201280873 |
387 | R>Q | Variant assessed as Somatic; 0.0 impact. Southeast Asian ovalocytosis central_nervous_system [NCI-TCGA, ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA8600353 RCV001306392 RCV002493607 rs768426818 |
394 | L>P | Southeast Asian ovalocytosis [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs150913170 CA8600351 RCV002545140 RCV001324031 |
398 | T>I | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001377074 RCV001807735 RCV000019329 RCV001849272 RCV000019330 RCV001536118 rs769664228 |
400 | A>missing | Distal renal tubular acidosis Southeast Asian ovalocytosis Renal tubular acidosis, distal, 4, with hemolytic anemia Malaria, cerebral, resistance to [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_000801 | 400 | A>del | SAO and DRTA4; increased rigidity of the erythrocyte membrane leading to increased resistance to shear stress and increased resistance to P.falciparum [UniProt] | Yes | UniProt |
|
RCV001123486 RCV001124565 RCV001123487 CA8600349 rs141751197 |
401 | F>C | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
RCV000376413 rs201821517 RCV000318444 CA8600344 RCV000284250 |
409 | V>I | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001127590 RCV001362841 rs142905862 RCV001127591 CA8600338 RCV001127589 |
420 | A>T | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1555596165 CA399787649 RCV000655904 |
441 | L>R | Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
VAR_087559 rs754973425 CA8600298 RCV003138131 RCV002463585 |
444 | T>N | Renal tubular acidosis, distal, 4, with hemolytic anemia DRTA4; decreased expression; decreased stability; no effect on dimerization [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
| VAR_013789 | 455 | G>E | SPH4; Benesov [UniProt] | Yes | UniProt |
| VAR_058038 | 455 | G>R | SPH4; Yamagata [UniProt] | Yes | UniProt |
|
rs1555596072 CA399786001 RCV000655902 |
486 | Y>* | Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000019350 CA127399 RCV001851941 RCV002496417 COSM187667 rs28931584 RCV001254881 VAR_013791 |
488 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine Southeast Asian ovalocytosis Renal tubular acidosis, distal, 4, with hemolytic anemia Hereditary spherocytosis type 4 SPH4; Coimbra; also in AR-dRTA [NCI-TCGA, Cosmic, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt NCI-TCGA dbSNP gnomAD |
|
rs1398477044 CA399785930 VAR_013792 |
490 | R>C | Variant assessed as Somatic; impact. SPH4; Bicetre I [NCI-TCGA, UniProt] | Yes |
ClinGen UniProt NCI-TCGA TOPMed dbSNP gnomAD |
|
COSM3387932 CA399785928 RCV001001226 RCV002550748 rs1598299485 VAR_058039 |
490 | R>H | pancreas SPH4; Pinhal [Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt Ensembl dbSNP |
|
rs757478694 RCV002505702 CA8600256 RCV001125480 RCV001124482 RCV001124481 |
491 | V>M | Hemolytic anemia Variant assessed as Somatic; 0.0 impact. Southeast Asian ovalocytosis Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
RCV000658783 COSM252824 CA8600255 RCV002499135 rs751771382 |
494 | G>S | ovary Variant assessed as Somatic; 0.0 impact. Southeast Asian ovalocytosis [Cosmic, NCI-TCGA, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV002507278 CA399785495 rs745839527 RCV000722947 COSM1383635 |
514 | R>H | large_intestine Southeast Asian ovalocytosis Variant assessed as Somatic; impact. [Cosmic, ClinVar, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
RCV001029999 VAR_000802 CA290930673 rs868742796 |
518 | R>C | Variant assessed as Somatic; impact. Autosomal dominant distal renal tubular acidosis SPH4; Dresden [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt NCI-TCGA TOPMed dbSNP |
|
RCV002524424 CA399785265 RCV000505669 rs1555596013 |
525 | S>F | Autosomal dominant distal renal tubular acidosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs2047398183 RCV002291023 |
538 | S>missing | Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000323184 rs886052998 RCV000283388 RCV000380114 CA10639800 |
546 | D>G | Hemolytic anemia Spherocytosis, Dominant Distal Renal Tubular Acidosis, Dominant [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV002504487 CA399784102 rs201228206 RCV001316344 CA8600205 RCV002543690 |
587 | M>L | Southeast Asian ovalocytosis Inborn genetic diseases [ClinVar] | Yes |
ClinGen 1000Genomes ExAC TOPMed gnomAD ClinVar dbSNP |
|
VAR_015104 rs121912745 RCV000681873 CA127388 RCV000019341 RCV000763403 RCV001328227 |
589 | R>C | Southeast Asian ovalocytosis Autosomal dominant distal renal tubular acidosis Renal tubular acidosis DRTA1; reduced red cell sulfate transport and altered glycosylation of the red cell band 3 N-glycan chain [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001849273 RCV001387018 RCV000019340 CA127387 RCV002513120 rs121912744 VAR_015105 |
589 | R>H | Distal renal tubular acidosis Autosomal dominant distal renal tubular acidosis Inborn genetic diseases DRTA1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000019343 RCV001851940 VAR_015106 rs121912745 CA127390 |
589 | R>S | Autosomal dominant distal renal tubular acidosis DRTA1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs121912754 CA290929106 VAR_039292 |
602 | R>H | DRTA4 [UniProt] | Yes |
ClinGen UniProt TOPMed dbSNP gnomAD |
|
rs121912754 CA127405 RCV000019357 |
602 | R>P | Renal tubular acidosis, distal, 4, with hemolytic anemia [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001328264 CA10581267 rs878853002 RCV000224119 VAR_058041 |
609 | G>R | Renal tubular acidosis DRTA1; detected subapically and at the apical membrane as well as at the basolateral membrane in contrast to the normal basolateral appearance of wild-type protein [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
VAR_015107 rs121912746 CA127389 RCV000019342 |
613 | S>F | Autosomal dominant distal renal tubular acidosis DRTA1; markedly increased red cell sulfate transport but almost normal red cell iodide transport [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA8600164 rs763988041 RCV001127478 RCV001123373 RCV001123372 |
643 | S>F | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001127476 RCV001507896 rs121912757 CA127408 RCV001001070 RCV000019360 VAR_013800 RCV001127477 RCV001127475 |
646 | R>Q | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 SW(a+) antigen [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs75731670 COSM1265956 RCV001125390 RCV001201773 RCV000019336 RCV001125389 CA127380 RCV001125391 VAR_000806 |
658 | E>K | Hemolytic anemia oesophagus Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 Blood group--wright antigen (wr) WR(a) antigen [ClinVar, Cosmic, Ensembl, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
| VAR_058042 | 663 | M>K | SPH4; Tambau [UniProt] | Yes | UniProt |
| VAR_000807 | 663 | M>del | SPH4; Osnabruck II [UniProt] | Yes | UniProt |
|
CA8600145 RCV000622973 rs776831481 |
679 | F>L | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs863225463 VAR_039293 CA215057 RCV000202408 |
687 | L>P | Cryohydrocytosis CHC; Blackburn; induces abnormal cations sodium and potassium fluxes; decreases anion chloride transport [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV002496416 RCV001381365 VAR_015171 CA127391 rs121912748 RCV000019344 |
701 | G>D | Southeast Asian ovalocytosis Renal tubular acidosis, distal, 4, with hemolytic anemia DRTA4 and dRTA-NRC; impairs expression at the cell membrane [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
| VAR_039294 | 705 | D>Y | SPH4; Horam; induces abnormal cations sodium and potassium fluxes; decreases anion chloride transport [UniProt] | Yes | UniProt |
| VAR_013804 | 707 | L>P | SPH4; Most [UniProt] | Yes | UniProt |
| VAR_013805 | 714 | G>R | SPH4; Okinawa [UniProt] | Yes | UniProt |
|
CA8600106 RCV000658782 RCV002536332 rs750490778 |
717 | A>T | Variant assessed as Somatic; 0.0 impact. Inborn genetic diseases [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs863225461 CA215058 VAR_039295 RCV000202410 |
731 | S>P | Cryohydrocytosis CHC; Hemel; induces abnormal cations sodium and potassium fluxes; decreases anion chloride transport [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA215059 rs863225462 VAR_039296 RCV000202413 |
734 | H>R | Cryohydrocytosis CHC; Hurstpierpont; induces abnormal cations sodium and potassium fluxes; decreases anion chloride transport [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000304165 RCV000342542 RCV000393610 CA10639799 rs886052997 |
737 | A>V | Hemolytic anemia Spherocytosis, Dominant Distal Renal Tubular Acidosis, Dominant [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs886052996 RCV002487421 CA10650263 RCV000343888 RCV000291301 RCV000393731 |
748 | G>E | Hemolytic anemia Southeast Asian ovalocytosis Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs121912755 RCV000019358 VAR_013806 RCV002227042 CA210834 |
760 | R>Q | Variant assessed as Somatic; impact. Hereditary spherocytosis type 4 SPH4; Prague II; induces abnormal cations sodium and potassium fluxes; decreases anion chloride transport [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt NCI-TCGA TOPMed dbSNP |
|
CA8600090 VAR_013807 RCV002227236 rs373916826 RCV000989925 |
760 | R>W | Hereditary spherocytosis type 4 SPH4; Hradec Kralove [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC dbSNP gnomAD |
|
RCV000019337 VAR_013808 rs121912741 CA127382 |
771 | G>D | Hereditary spherocytosis type 4 SPH4; Chur [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000019356 VAR_039297 CA127404 rs121912753 |
773 | S>P | Renal tubular acidosis, distal, with normal red cell morphology dRTA-NRC [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_013809 | 783 | I>N | SPH4; Napoli II [UniProt] | Yes | UniProt |
|
RCV001328266 rs2047339489 |
795 | M>I | Renal tubular acidosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002499498 RCV001507891 CA8600043 rs766885976 |
796 | G>A | Southeast Asian ovalocytosis [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs775095594 RCV003142050 RCV001123289 CA8600038 RCV001123287 RCV001123288 TCGA novel |
801 | S>R | Variant assessed as Somatic; impact. Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [NCI-TCGA, ClinVar] | Yes |
NCI-TCGA ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
VAR_013810 rs1167814744 CA399780645 |
808 | R>C | Variant assessed as Somatic; 0.0 impact. SPH4; Jablonec [NCI-TCGA, UniProt] | Yes |
ClinGen UniProt NCI-TCGA dbSNP gnomAD |
|
RCV003140049 CA290925289 RCV000655906 rs866727908 VAR_013811 COSM706172 RCV002290971 |
808 | R>H | lung Variant assessed as Somatic; impact. Hereditary spherocytosis type 4 SPH4; Nara [Cosmic, NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt Ensembl NCI-TCGA dbSNP |
|
rs387906566 RCV000019335 |
822 | V>missing | Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_013812 | 834 | H>P | SPH4; Birmingham [UniProt] | Yes | UniProt |
|
rs121912750 RCV000019347 VAR_013813 CA127395 |
837 | T>A | Hereditary spherocytosis type 4 SPH4; Tokyo [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_013814 | 837 | T>M | SPH4; Philadelphia [UniProt] | Yes | UniProt |
| VAR_058043 | 837 | T>R | SPH4; Nagoya [UniProt] | Yes | UniProt |
|
rs121912752 VAR_015109 RCV000019349 |
850 | V>missing | Renal tubular acidosis, distal, 4, with hemolytic anemia DRTA4 [ClinVar, UniProt] | Yes |
ClinVar UniProt dbSNP |
|
rs121912752 VAR_015109 |
850 | V>del | DRTA4 [UniProt] | Yes |
UniProt dbSNP |
|
COSM1740375 VAR_000808 RCV000989924 RCV000388319 CA127392 rs2285644 RCV000019345 RCV001127356 RCV000248753 RCV000974422 |
854 | P>L | Hemolytic anemia Autosomal dominant distal renal tubular acidosis haematopoietic_and_lymphoid_tissue Hereditary spherocytosis type 4 Di(a)/Memphis-II antigen [ClinVar, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001536017 rs121912751 RCV001849274 RCV000761459 CA127396 VAR_015108 RCV000019348 RCV002514116 |
858 | A>D | Distal renal tubular acidosis Southeast Asian ovalocytosis Renal tubular acidosis, distal, 4, with hemolytic anemia Autosomal dominant distal renal tubular acidosis DRTA1; impairs expression at the cell membrane [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs5026 CA8599996 RCV000333719 VAR_014619 RCV000259837 RCV000755389 RCV000253682 RCV000373059 |
862 | V>I | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002247370 RCV002054448 RCV000991183 VAR_013815 CA127410 RCV001124275 RCV001126941 rs121912759 RCV001126942 RCV000019361 |
868 | P>L | Acanthocytosis due to band 3 ht Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 acanthocytosis; slightly increases transporter activity; impairs expression at the cell membrane [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000019354 CA127403 rs28931585 VAR_013816 RCV001093444 |
870 | R>W | Variant assessed as Somatic; impact. Hereditary spherocytosis type 4 SPH4; Prague III [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt NCI-TCGA dbSNP gnomAD |
|
RCV002476070 CA8599991 RCV000518857 rs781396793 |
871 | R>H | Southeast Asian ovalocytosis [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA8599989 RCV002480885 RCV001328265 rs747337202 |
872 | V>I | Southeast Asian ovalocytosis Renal tubular acidosis [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA8599985 rs765911147 RCV000263312 RCV000318381 RCV000358059 |
877 | I>T | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs189300762 RCV001316920 RCV002476476 |
901 | R>P | Southeast Asian ovalocytosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs201265160 RCV000054610 RCV000346002 RCV000306677 CA216108 RCV000391446 |
901 | R>W | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002070082 rs199694087 RCV001127262 RCV002249736 RCV001127261 RCV001127260 CA8599948 |
906 | E>Q | Hemolytic anemia Autosomal dominant distal renal tubular acidosis Hereditary spherocytosis type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001247448 rs2047328405 RCV002499429 |
909 | M>T | Southeast Asian ovalocytosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA290937209 rs777378002 |
2 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8600775 rs777378002 |
2 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs781547181 CA8600749 |
9 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA290936893 rs867756325 |
9 | E>K | No |
ClinGen Ensembl |
|
|
rs1199756918 CA399798603 |
10 | D>V | No |
ClinGen gnomAD |
|
|
CA8600746 rs764087255 |
11 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8600747 rs751603156 |
11 | M>L | No |
ClinGen ExAC |
|
|
RCV001211036 CA290936873 rs1053490380 |
11 | M>R | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
rs1279075319 CA399798540 |
12 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA399798541 rs1340195567 |
12 | M>R | No |
ClinGen TOPMed gnomAD |
|
|
CA399798542 rs1340195567 |
12 | M>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 13 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8600745 rs763516149 |
14 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1334113918 CA399798457 |
17 | E>K | No |
ClinGen gnomAD |
|
|
CA8600744 rs55926998 |
19 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA399798359 rs1220892947 |
21 | Y>C | No |
ClinGen TOPMed |
|
|
rs1465425529 CA399798178 |
25 | D>V | No |
ClinGen gnomAD |
|
|
CA8600741 rs772984725 |
26 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| VAR_058035 | 27 | P>H | No | UniProt | |
|
CA8600739 rs55637644 |
28 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA399798087 rs1210511088 |
29 | S>A | No |
ClinGen TOPMed gnomAD |
|
|
CA290936862 rs879030630 |
29 | S>F | No |
ClinGen gnomAD |
|
| TCGA novel | 30 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs879106259 CA290936844 |
31 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs55773290 CA8600737 |
31 | M>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA290936861 rs990089479 |
31 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA8600738 rs55773290 |
31 | M>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs56312419 CA8600735 |
34 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1271763556 CA399798014 |
35 | A>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 36 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8600710 rs755063758 |
38 | D>L | No |
ClinGen ExAC |
|
|
CA8600708 rs149644876 |
38 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8600707 rs5035 |
38 | D>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA399796950 rs1490869125 |
39 | T>I | No |
ClinGen gnomAD |
|
|
CA399796940 rs1355116360 |
41 | A>S | No |
ClinGen gnomAD |
|
|
rs756472075 CA8600703 |
44 | T>K | No |
ClinGen ExAC gnomAD |
|
|
rs34700496 CA290936189 VAR_036693 |
45 | D>E | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA290936171 rs895769487 |
47 | H>N | No |
ClinGen TOPMed |
|
|
CA8600702 rs751216460 |
52 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762611304 CA8600700 |
53 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA399796807 rs1343209793 |
53 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA8600699 rs542327721 |
56 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA399796700 rs764706733 |
57 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8600681 rs764706733 |
57 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766170301 CA8600678 |
59 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA8600677 rs760664657 |
60 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA8600676 rs369101481 |
60 | E>D | No |
ClinGen ESP ExAC gnomAD |
|
|
CA8600671 rs768773486 |
67 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs762102370 CA399796516 |
67 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs762102370 CA8600673 |
67 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA399796500 rs13306787 RCV000756656 |
68 | E>* | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs267604902 CA399796467 |
69 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1410054223 CA399796479 |
69 | K>R | No |
ClinGen gnomAD |
|
|
rs770137241 CA8600668 |
72 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA8600669 rs780200225 |
72 | E>K | No |
ClinGen ExAC gnomAD |
|
|
VAR_039291 rs781490287 CA8600666 |
73 | L>M | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
|
rs757668165 CA399796357 |
75 | W>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757668165 CA8600665 |
75 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8600663 rs778603628 |
76 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs752316872 CA8600664 |
76 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA399796322 RCV000722657 rs1567834917 |
77 | E>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs186542577 COSM3190909 CA8600662 |
78 | A>V | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs376688172 CA8600660 |
79 | A>E | No |
ClinGen ESP ExAC gnomAD |
|
|
COSM1640711 rs376688172 CA8600659 |
79 | A>V | stomach [Cosmic] | No |
ClinGen cosmic curated ESP ExAC gnomAD |
|
CA290935467 COSM175389 rs199535281 |
80 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
COSM472881 CA8600657 rs372860708 |
80 | R>H | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA290935460 rs372860708 |
80 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1598302037 RCV001002044 CA399796273 |
81 | W>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1487738715 CA399796283 |
81 | W>R | No |
ClinGen TOPMed |
|
|
CA399796264 rs1481733360 |
82 | V>M | No |
ClinGen gnomAD |
|
|
rs1222201466 CA399796217 |
86 | E>K | No |
ClinGen TOPMed |
|
|
rs1457516456 CA399796189 |
88 | L>V | No |
ClinGen gnomAD |
|
|
CA8600654 rs145054469 |
93 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1380205574 CA399796062 |
95 | G>R | No |
ClinGen gnomAD |
|
|
rs1380205574 CA399796061 |
95 | G>S | No |
ClinGen gnomAD |
|
|
CA8600650 rs141244582 |
96 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs141244582 CA8600649 |
96 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs538778224 CA8600652 |
96 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA290935403 rs879167300 |
97 | P>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 98 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8600648 rs771281363 |
98 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA399795964 rs1207640724 |
99 | L>F | No |
ClinGen gnomAD |
|
|
CA8600645 rs778203864 |
106 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs367688756 CA290935385 |
108 | L>P | No |
ClinGen ESP TOPMed |
|
|
CA8600644 rs753548782 |
109 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1321415255 CA399795715 |
109 | E>G | No |
ClinGen gnomAD |
|
|
rs1308401874 CA399795729 |
109 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs13306774 CA8600642 |
111 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs13306774 CA8600641 |
111 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767615788 CA8600640 |
111 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA8600639 rs767615788 |
111 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA290935376 VAR_014613 rs5037 |
112 | R>S | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs1305089612 CA399795652 |
113 | V>D | No |
ClinGen gnomAD |
|
|
rs142757938 CA8600637 RCV000883456 |
113 | V>I | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 116 | K>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399795585 rs1417908221 |
117 | G>C | No |
ClinGen gnomAD |
|
|
rs367854785 CA290935264 |
117 | G>D | No |
ClinGen ESP gnomAD |
|
|
CA399795483 rs1441074553 |
118 | T>A | No |
ClinGen gnomAD |
|
|
CA399795431 rs1442706372 |
121 | L>V | No |
ClinGen TOPMed |
|
|
CA399795345 rs1162787335 |
124 | Q>K | No |
ClinGen TOPMed |
|
|
rs1265248505 CA399795275 |
127 | S>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1270796249 CA399795169 |
130 | G>A | No |
ClinGen gnomAD |
|
|
CA8600614 rs766469709 |
131 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399795114 rs1453908890 |
132 | A>V | No |
ClinGen gnomAD |
|
|
rs772316375 CA399795072 |
134 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA8600611 rs772316375 |
134 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs748601363 CA8600610 |
135 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA8600609 rs774589011 |
137 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs953305379 CA290935174 |
138 | R>G | No |
ClinGen TOPMed |
|
|
CA399794889 rs1168035577 |
141 | F>L | No |
ClinGen gnomAD |
|
|
CA8600607 rs745550262 |
143 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769500332 CA8600608 |
143 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1270521728 CA399794783 |
144 | Q>H | No |
ClinGen TOPMed |
|
|
rs780804585 CA399794785 |
144 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780804585 CA8600606 |
144 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8600605 rs756879780 |
145 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs777835021 CA8600603 |
146 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs746893322 CA8600604 |
146 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1273936626 CA399794714 |
148 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA8600601 rs56361140 |
150 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs761306530 CA8600600 |
150 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3402934 rs761306530 CA8600599 |
150 | R>Q | Variant assessed as Somatic; 9.282e-05 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs145041032 CA290935130 |
153 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8600594 rs750879183 |
155 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs536419419 CA8600595 |
155 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1353631860 CA399794431 |
161 | H>N | No |
ClinGen gnomAD |
|
|
rs1353631860 CA399794429 |
161 | H>Y | No |
ClinGen gnomAD |
|
|
CA399794388 rs1329108175 |
162 | S>N | No |
ClinGen gnomAD |
|
|
CA8600571 rs543366685 |
164 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 167 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1282236934 CA399793954 |
171 | G>A | No |
ClinGen gnomAD |
|
|
rs576351762 CA8600568 |
171 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8600569 rs576351762 |
171 | G>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA399793950 rs771529404 |
172 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA8600567 rs771529404 |
172 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1222836115 COSM706167 CA399793937 |
172 | G>V | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
| TCGA novel | 173 | V>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA290934705 rs894383628 |
173 | V>M | No |
ClinGen TOPMed |
|
| TCGA novel | 174 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201611359 CA399793875 |
175 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8600565 rs201611359 |
175 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA399793857 rs1296269523 |
176 | A>T | No |
ClinGen gnomAD |
|
|
CA399793849 rs1429887036 |
176 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 177 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 178 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8600563 rs749020872 |
180 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs147390654 CA399793757 |
180 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8600564 rs749020872 |
180 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399793715 rs1177351006 |
181 | S>F | No |
ClinGen gnomAD |
|
|
CA399793693 rs1261071952 |
183 | D>N | No |
ClinGen gnomAD |
|
|
rs267604901 CA290934678 |
184 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA8600561 rs756316460 |
186 | Q>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 187 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV000413863 rs1057518222 |
190 | P>missing | No |
ClinVar dbSNP |
|
|
rs1324418745 CA399793519 |
191 | Q>E | No |
ClinGen TOPMed |
|
|
CA8600557 rs144291541 |
192 | H>N | No |
ClinGen ESP ExAC gnomAD |
|
|
rs919382250 CA290934641 |
192 | H>Q | No |
ClinGen Ensembl |
|
|
CA399793484 rs1262134837 |
192 | H>R | No |
ClinGen gnomAD |
|
|
CA399793440 rs1567834170 |
193 | S>F | No |
ClinGen Ensembl |
|
|
rs1347029746 CA399793467 |
193 | S>P | No |
ClinGen gnomAD |
|
|
rs764757003 CA8600555 |
196 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1292757264 CA399793280 |
199 | L>V | No |
ClinGen gnomAD |
|
|
rs1567834132 CA399793233 |
200 | F>L | No |
ClinGen Ensembl |
|
|
rs879205711 CA290934628 |
202 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1036172070 CA290933268 |
205 | D>N | No |
ClinGen Ensembl |
|
|
CA290933256 rs867903049 |
210 | G>E | No |
ClinGen Ensembl |
|
|
rs1444507124 CA399791234 |
211 | H>P | No |
ClinGen gnomAD |
|
|
CA8600522 rs769631746 |
211 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1040189915 CA290933220 |
213 | P>S | No |
ClinGen TOPMed |
|
|
CA399791137 rs1247999816 |
216 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 218 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs150515870 CA399791027 |
220 | I>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA399791023 rs150515870 |
220 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150515870 CA8600519 |
220 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM395636 rs1194814450 CA399791038 |
220 | I>V | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA8600518 rs770991877 |
221 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA290933206 rs374043643 |
221 | P>S | No |
ClinGen Ensembl |
|
|
CA8600517 rs747267972 |
222 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748658155 COSM3190895 CA8600514 |
227 | T>M | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1306566163 CA399790840 |
228 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1184180897 CA399790801 |
229 | V>A | No |
ClinGen TOPMed |
|
|
CA290933169 rs878921797 |
229 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1375641608 CA399790755 |
231 | V>L | No |
ClinGen gnomAD |
|
| rs748181631 | 232 | G>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755520925 CA8600512 |
232 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs369164512 CA8600492 |
233 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369164512 CA399790608 |
233 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV001290761 rs2047420220 |
234 | A>missing | No |
ClinVar dbSNP |
|
|
CA8600490 rs780256979 |
234 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1201529952 CA399790588 |
234 | A>V | No |
ClinGen gnomAD |
|
|
CA8600488 rs751211768 |
235 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399790581 rs751211768 |
235 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758064244 CA8600486 |
237 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1598300978 CA399790486 |
238 | E>D | No |
ClinGen Ensembl |
|
|
rs571740084 CA8600485 |
238 | E>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA399790470 rs1223096303 |
239 | Q>* | No |
ClinGen gnomAD |
|
|
rs879026462 CA290932959 |
239 | Q>L | No |
ClinGen Ensembl |
|
|
CA399790449 rs764833865 |
240 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 241 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs753864472 CA8600482 |
242 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1319543511 CA399790349 |
244 | F>V | No |
ClinGen gnomAD |
|
|
CA399790331 rs148170067 |
245 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1598300938 CA399790274 |
247 | L>R | No |
ClinGen Ensembl |
|
|
CA8600476 rs774242801 |
250 | A>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 251 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399790157 rs1480134522 |
251 | A>V | No |
ClinGen TOPMed |
|
|
CA399790094 rs1410790512 |
253 | L>P | No |
ClinGen TOPMed |
|
|
rs773761086 CA8600474 |
255 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399789988 rs1598300908 |
256 | V>G | No |
ClinGen Ensembl |
|
|
CA399790006 rs1405212447 COSM1521436 |
256 | V>L | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA8600470 rs142195740 |
257 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8600469 rs758007015 |
258 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA8600468 rs138948233 |
258 | L>P | No |
ClinGen ESP ExAC gnomAD |
|
|
rs778266623 CA8600467 |
259 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1598300874 CA399789891 |
260 | V>G | No |
ClinGen Ensembl |
|
|
CA290932771 rs878929109 |
261 | P>H | No |
ClinGen TOPMed |
|
|
rs879205282 CA290932772 |
261 | P>T | No |
ClinGen TOPMed |
|
|
CA399789851 rs1219783061 |
262 | I>V | No |
ClinGen gnomAD |
|
|
rs145071135 CA8600464 RCV001813039 |
263 | R>C | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs201400208 CA8600463 COSM3712333 |
263 | R>H | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs767437892 CA8600461 |
266 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1406443344 CA399789623 |
271 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 272 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs879088971 CA290932758 |
273 | A>D | No |
ClinGen TOPMed |
|
|
CA8600458 rs764079011 |
273 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA8600455 rs142866653 |
275 | H>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs142866653 CA8600456 |
275 | H>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA399789513 rs1451312246 |
275 | H>R | No |
ClinGen gnomAD |
|
| TCGA novel | 275 | H>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA290932713 rs142866653 |
275 | H>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA399789448 rs1239447378 |
277 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs138288425 CA8600452 |
277 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1437347148 CA399789337 |
282 | G>V | No |
ClinGen gnomAD |
|
|
CA399789319 rs1207355825 |
283 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA399789307 rs1207355825 |
283 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1273740834 CA399789329 |
283 | R>W | No |
ClinGen gnomAD |
|
|
CA8600450 rs778684107 |
285 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA8600449 rs754599702 |
286 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1247242334 CA399789227 |
286 | A>V | No |
ClinGen gnomAD |
|
|
rs1285629503 CA399789211 |
287 | T>N | No |
ClinGen gnomAD |
|
|
rs1439510759 CA399789203 |
288 | L>V | No |
ClinGen gnomAD |
|
|
rs1328998568 CA399789167 |
289 | M>I | No |
ClinGen gnomAD |
|
|
rs150403270 CA8600448 |
289 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs769465410 CA8600429 |
295 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769465410 CA399788992 |
295 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs140424071 CA399788988 |
295 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs769465410 CA290932140 |
295 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781169594 CA290932128 |
296 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs2047412306 RCV001813098 |
297 | D>G | No |
ClinVar dbSNP |
|
| TCGA novel | 299 | Y>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399788905 rs781245575 |
300 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA399788899 rs1369716888 |
300 | M>T | No |
ClinGen gnomAD |
|
|
CA8600427 rs781245575 |
300 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA8600426 rs757158425 |
304 | R>* | No |
ClinGen ExAC gnomAD |
|
|
CA8600425 rs777464599 |
304 | R>P | No |
ClinGen ExAC gnomAD |
|
|
RCV001222717 rs777464599 CA8600424 |
304 | R>Q | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA399788807 rs1196660376 |
306 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1322840729 CA399788804 |
307 | L>M | No |
ClinGen gnomAD |
|
|
CA399788786 rs1405585474 |
309 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs753925555 CA8600419 |
312 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1037040116 CA290932082 |
313 | G>A | No |
ClinGen TOPMed |
|
|
rs1206004419 CA399788733 |
317 | C>F | No |
ClinGen TOPMed |
|
|
CA8600418 rs766841307 |
317 | C>G | No |
ClinGen ExAC gnomAD |
|
|
CA399788735 rs1206004419 |
317 | C>Y | No |
ClinGen TOPMed |
|
|
rs761116611 CA8600417 |
318 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA399788727 rs1202141330 |
318 | S>N | No |
ClinGen gnomAD |
|
|
CA8600416 rs773576791 |
320 | V>L | No |
ClinGen ExAC |
|
|
CA8600415 rs772367319 |
322 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA8600412 rs769412359 |
325 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8600411 rs745317710 |
326 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs554068015 CA8600410 |
327 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA399788677 rs28931583 |
327 | P>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs28931583 CA399788676 |
327 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA399788678 rs554068015 |
327 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8600408 rs141370158 COSM3378213 |
329 | E>K | pancreas [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA8600406 rs752913557 |
331 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1467655276 CA399788650 |
332 | L>M | No |
ClinGen gnomAD |
|
|
rs753913623 CA8600403 |
337 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA290931975 rs939529220 |
337 | P>T | No |
ClinGen Ensembl |
|
|
rs761222442 CA399788589 |
341 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA8600402 rs766390834 |
341 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA399788583 rs1470604604 |
343 | L>I | No |
ClinGen TOPMed |
|
|
rs767916903 CA8600399 |
344 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371106409 COSM1383638 CA290931957 |
346 | R>C | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP NCI-TCGA TOPMed gnomAD |
|
CA8600398 rs199721620 |
346 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs371106409 CA399788566 |
346 | R>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1249061185 CA399788537 |
350 | S>N | No |
ClinGen gnomAD |
|
|
CA399788530 rs1203172738 |
351 | P>S | No |
ClinGen gnomAD |
|
|
CA8600397 rs774867548 |
355 | D>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 356 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399788487 rs1243523699 |
357 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1381691623 CA399788474 |
359 | Y>S | No |
ClinGen TOPMed gnomAD |
|
|
CA290931899 rs762128423 |
361 | G>A | No |
ClinGen gnomAD |
|
|
rs762128423 CA399788458 |
361 | G>D | No |
ClinGen gnomAD |
|
|
CA8600395 rs759297000 |
362 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs1330502780 CA399788429 |
364 | L>F | No |
ClinGen gnomAD |
|
|
CA8600376 rs765912543 |
364 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs144927348 CA8600377 |
364 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA399788416 rs1555596278 |
366 | G>E | No |
ClinGen Ensembl |
|
|
rs1404826934 CA399788413 |
367 | G>S | No |
ClinGen gnomAD |
|
|
rs1280044057 CA399788404 |
368 | P>L | No |
ClinGen TOPMed |
|
|
CA8600372 rs748103050 |
369 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771954160 CA8600373 |
369 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399788385 rs1361719688 |
371 | P>S | No |
ClinGen gnomAD |
|
|
rs1472653057 RCV001813166 |
373 | Q>* | No |
ClinVar dbSNP |
|
|
rs1472653057 CA399788375 |
373 | Q>K | No |
ClinGen gnomAD |
|
|
rs768475898 CA8600370 |
373 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs895437981 CA290931642 |
374 | Q>E | No |
ClinGen TOPMed |
|
|
rs1211811938 CA399788366 |
374 | Q>R | No |
ClinGen TOPMed |
|
|
CA399788357 rs1490176926 |
375 | T>I | No |
ClinGen gnomAD |
|
|
rs768031591 CA8600369 |
376 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399788343 rs1211473668 |
378 | L>F | No |
ClinGen gnomAD |
|
|
CA290931621 rs939561010 COSM1383637 |
380 | G>R | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
| TCGA novel | 382 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8600367 rs563083166 |
382 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs745866076 CA8600366 |
383 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA8600365 rs781454553 |
384 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs781454553 CA399788309 |
384 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs531459694 CA8600362 COSM979929 |
387 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA8600359 RCV001002331 rs765891978 |
388 | R>C | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA8600358 rs760404726 |
388 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8600360 rs765891978 |
388 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749883402 COSM1383636 CA8600357 |
389 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA8600356 rs767059191 |
389 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8600355 rs761704181 |
391 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs774339293 CA8600354 |
393 | Y>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1248859174 CA399788240 |
396 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1261484009 CA399788206 |
401 | F>L | No |
ClinGen gnomAD |
|
|
rs781401079 CA8600348 |
402 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA290931509 rs966331349 |
403 | P>S | No |
ClinGen gnomAD |
|
|
rs1326337460 CA399788147 |
405 | V>A | No |
ClinGen gnomAD |
|
|
rs1567832529 CA399788140 |
406 | L>P | No |
ClinGen Ensembl |
|
|
CA399788120 rs1413411499 |
410 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1402242061 CA399788105 |
412 | I>V | No |
ClinGen gnomAD |
|
|
CA290931491 rs559888630 |
413 | Y>C | No |
ClinGen 1000Genomes TOPMed |
|
|
rs779355603 CA8600342 |
416 | A>V | No |
ClinGen ExAC gnomAD |
|
|
RCV001812495 rs2047405727 |
417 | L>P | No |
ClinVar dbSNP |
|
|
rs1451037792 CA399788060 |
419 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 420 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA290931458 rs142905862 |
420 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA399788053 rs1443101287 |
420 | A>V | No |
ClinGen gnomAD |
|
|
rs374741150 CA8600336 |
424 | G>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1275956651 CA399788023 |
425 | G>S | No |
ClinGen gnomAD |
|
|
CA8600333 rs769681011 |
428 | G>* | No |
ClinGen ExAC |
|
|
rs1048804130 CA290931240 VAR_058037 |
429 | E>D | NFLD+ antigen [UniProt] | No |
ClinGen UniProt TOPMed dbSNP gnomAD |
|
CA399787858 rs373768879 |
432 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200576400 CA8600307 |
432 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8600306 rs200576400 |
432 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
VAR_013788 CA8600308 rs373768879 |
432 | R>W | Variant assessed as Somatic; 0.0 impact. ELO antigen [NCI-TCGA, UniProt] | No |
ClinGen UniProt ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1328024172 CA399787797 |
434 | Q>H | No |
ClinGen gnomAD |
|
|
CA399787803 rs1598299792 |
434 | Q>R | No |
ClinGen Ensembl |
|
|
CA8600305 rs780426059 |
435 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA399787732 rs1598299778 |
437 | V>A | No |
ClinGen Ensembl |
|
|
rs746715222 CA8600303 |
438 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 439 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8600301 rs370924118 |
440 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
VAR_014614 rs5018 CA290931162 |
442 | I>F | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA399787592 rs754973425 |
444 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1389616126 CA399787573 |
445 | A>V | No |
ClinGen gnomAD |
|
|
rs149362848 CA8600297 |
446 | V>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA290931121 rs977989614 |
447 | Q>H | No |
ClinGen Ensembl |
|
|
CA399787502 rs1425090317 |
451 | F>L | No |
ClinGen gnomAD |
|
|
CA8600294 rs773546206 |
452 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1160745315 CA399787476 |
452 | A>V | No |
ClinGen TOPMed |
|
|
CA399787469 rs1240770803 |
453 | L>P | No |
ClinGen gnomAD |
|
|
CA399787445 rs1464215226 |
455 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA8600292 rs774299761 |
456 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA8600291 rs774299761 |
456 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs769110150 CA8600290 |
458 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA399787379 rs1219684112 |
462 | V>F | No |
ClinGen gnomAD |
|
|
CA399787364 rs1295178036 COSM3772932 |
463 | G>S | pancreas [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1567832203 CA399787330 |
465 | S>L | No |
ClinGen Ensembl |
|
|
CA290931017 rs865978722 |
466 | G>E | No |
ClinGen Ensembl |
|
|
RCV001316152 rs2047401850 |
467 | P>L | No |
ClinVar dbSNP |
|
|
CA399787312 rs1245399873 |
467 | P>S | No |
ClinGen gnomAD |
|
|
CA399787283 rs1385634590 |
470 | V>L | No |
ClinGen TOPMed |
|
|
rs770185997 CA8600287 |
474 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs746637879 CA8600286 |
476 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA8600285 rs777540700 |
477 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 478 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA127406 RCV000019359 rs121912756 VAR_013790 |
480 | E>K | Variant assessed as Somatic; 4.657e-05 impact. FR(a+) antigen [NCI-TCGA, UniProt] | No |
ClinGen ClinVar UniProt ExAC NCI-TCGA dbSNP gnomAD |
|
rs199607239 CA8600265 |
481 | T>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM380424 rs747781974 CA8600264 |
482 | N>S | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs544557335 CA8600262 |
483 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1483329396 CA399786024 |
485 | E>D | No |
ClinGen gnomAD |
|
|
CA8600260 rs780078743 |
487 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA399785980 rs1242338114 |
487 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1359458155 CA399785892 |
492 | W>* | No |
ClinGen gnomAD |
|
| TCGA novel | 495 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399785785 RCV001000922 rs1598299453 |
497 | L>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA290930799 rs752788858 |
498 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8600252 rs752788858 |
498 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1425061857 CA399785768 |
498 | I>T | No |
ClinGen gnomAD |
|
|
CA290930779 rs200420337 |
499 | L>P | No |
ClinGen 1000Genomes |
|
|
rs146305310 CA8600251 |
501 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA399785702 rs759996988 |
503 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771251554 CA8600248 |
504 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1487999665 CA399785639 |
505 | V>E | No |
ClinGen gnomAD |
|
|
CA8600247 rs761518956 |
505 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1161833327 CA399785622 |
506 | A>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 508 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs45568837 CA8600244 COSM1521437 VAR_025090 RCV000883455 |
508 | E>K | lung [Cosmic] | No |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA399785567 rs1243220420 |
509 | G>S | No |
ClinGen gnomAD |
|
| TCGA novel | 510 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1567831936 CA399785538 |
510 | S>R | No |
ClinGen Ensembl |
|
|
CA8600243 rs775170265 |
511 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA290930694 rs926697680 |
512 | L>P | No |
ClinGen Ensembl |
|
|
rs374488470 CA290930700 |
512 | L>V | No |
ClinGen ESP TOPMed |
|
|
rs769722806 CA8600242 |
514 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs745839527 CA8600241 |
514 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs1386568242 CA399785466 |
516 | I>T | No |
ClinGen gnomAD |
|
|
CA399785446 rs1391855595 |
517 | S>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8600240 rs781007961 |
518 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747221430 CA8600238 |
521 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1157852154 CA399785299 |
523 | I>T | No |
ClinGen gnomAD |
|
| TCGA novel | 526 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399785169 rs1432411524 |
532 | F>C | No |
ClinGen gnomAD |
|
|
CA399785149 rs1567831874 |
533 | I>M | No |
ClinGen Ensembl |
|
|
CA290930643 rs868857711 |
540 | L>R | No |
ClinGen Ensembl |
|
|
CA399785028 rs1267849574 |
541 | I>F | No |
ClinGen gnomAD |
|
|
rs886052998 CA399784843 |
546 | D>A | No |
ClinGen Ensembl |
|
|
CA290929561 VAR_000803 rs879202054 |
548 | P>L | RB(A) antigen [UniProt] | No |
ClinGen UniProt TOPMed dbSNP gnomAD |
|
rs1337883145 CA399784798 |
548 | P>S | No |
ClinGen TOPMed |
|
|
CA399784756 rs1254217958 |
550 | Q>* | No |
ClinGen gnomAD |
|
| VAR_013793 | 551 | K>N | TR(A) antigen [UniProt] | No | UniProt |
|
rs1598298532 CA399784738 |
551 | K>Q | No |
ClinGen Ensembl |
|
| VAR_000804 | 552 | T>I | WARR antigen [UniProt] | No | UniProt |
|
CA290929533 rs925053539 |
554 | N>S | No |
ClinGen Ensembl |
|
|
CA399784668 rs1235151548 |
555 | Y>C | No |
ClinGen TOPMed |
|
| VAR_013794 | 555 | Y>H | VG(a) antigen [UniProt] | No | UniProt |
|
CA399784613 rs121912743 |
557 | V>L | Blood group--waldner type (wd) [Ensembl] | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
CA127377 rs121912743 RCV000019334 VAR_000805 |
557 | V>M | Blood group--waldner type (wd) WD(a) antigen [Ensembl, UniProt] | No |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
| VAR_058040 | 561 | P>A | NFLD+ antigen [UniProt] | No | UniProt |
| VAR_013795 | 561 | P>S | BOW antigen [UniProt] | No | UniProt |
|
rs551784583 CA8600219 VAR_013796 |
565 | G>A | WU antigen [UniProt] | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
| VAR_013797 | 566 | P>A | KREP antigen [UniProt] | No | UniProt |
|
rs1393742050 VAR_013798 CA399784425 |
566 | P>S | PN(a) antigen [UniProt] | No |
ClinGen UniProt Ensembl dbSNP |
|
CA399784386 rs1331702687 |
568 | P>H | No |
ClinGen gnomAD |
|
| VAR_013799 | 569 | N>K | BP(a) antigen [UniProt] | No | UniProt |
|
rs753963152 CA8600216 |
569 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA8600215 rs766724609 |
570 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1427615024 CA399784335 |
571 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1427615024 CA399784337 |
571 | A>T | No |
ClinGen gnomAD |
|
|
CA399784280 rs1389266610 |
574 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8600212 rs768043242 |
576 | V>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1406322619 CA399784259 |
576 | V>M | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 577 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775348499 CA8600210 |
578 | M>T | No |
ClinGen ExAC gnomAD |
|
|
COSM187666 CA290929441 rs867278946 |
579 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs369015220 CA290929427 |
580 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs369015220 CA8600208 |
580 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776210034 CA8600207 |
580 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs142161945 CA8600206 |
581 | T>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs5019 CA290929412 VAR_014615 |
586 | M>L | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs1405169026 CA399784108 |
586 | M>T | No |
ClinGen gnomAD |
|
|
rs879096190 CA290929410 |
587 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs201228206 CA399784103 |
587 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 590 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771896883 CA8600203 |
594 | S>N | No |
ClinGen ExAC gnomAD |
|
|
COSM1521438 rs748352642 CA8600202 |
594 | S>R | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1200242920 CA399784045 |
595 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs778941244 CA8600201 |
597 | F>I | No |
ClinGen ExAC gnomAD |
|
|
rs1219368051 CA399784027 |
598 | P>S | No |
ClinGen TOPMed |
|
| TCGA novel | 598 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399783986 rs1029692108 |
603 | R>P | No |
ClinGen gnomAD |
|
|
rs1029692108 CA290929096 |
603 | R>Q | No |
ClinGen gnomAD |
|
|
CA399783987 rs1468689028 |
603 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA399783979 rs1179344795 |
604 | V>A | No |
ClinGen TOPMed |
|
|
CA399783982 rs1317226571 |
604 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1179344795 CA399783981 |
604 | V>G | No |
ClinGen TOPMed |
|
|
CA290929081 rs575655181 |
606 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1598298123 CA399783940 |
610 | V>G | No |
ClinGen Ensembl |
|
|
rs759266589 CA8600190 |
611 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs993990444 CA290929019 |
611 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs765965557 CA8600188 |
613 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA290928973 rs766417093 |
614 | I>F | No |
ClinGen Ensembl |
|
|
CA290928966 rs867959285 |
615 | L>M | No |
ClinGen Ensembl |
|
|
rs865972695 CA290928964 |
617 | M>I | No |
ClinGen Ensembl |
|
|
rs760578317 CA8600187 |
617 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1161348602 CA399783896 |
618 | V>A | No |
ClinGen gnomAD |
|
|
CA399783893 rs1598298075 |
619 | L>V | No |
ClinGen Ensembl |
|
| TCGA novel | 620 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 620 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399783876 rs1355368755 |
621 | D>E | No |
ClinGen TOPMed |
|
|
CA399783883 rs1425064865 |
621 | D>Y | No |
ClinGen gnomAD |
|
|
rs772007058 CA8600185 |
622 | F>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 623 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399783831 rs1455807379 |
625 | Q>* | No |
ClinGen gnomAD |
|
|
rs1254531126 CA399783814 |
626 | D>N | No |
ClinGen gnomAD |
|
|
CA399783787 rs1464142736 |
627 | T>I | No |
ClinGen gnomAD |
|
|
CA399783762 rs1292546389 |
629 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA399783766 rs1292546389 |
629 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
rs2047378030 RCV001813165 |
630 | Q>H | No |
ClinVar dbSNP |
|
|
rs760240566 CA8600169 |
633 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA290928632 rs879114777 |
633 | S>P | No |
ClinGen gnomAD |
|
|
rs760240566 CA399783579 |
633 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1470668954 CA399783568 |
634 | V>L | No |
ClinGen gnomAD |
|
|
rs769977105 CA290928598 |
637 | G>D | No |
ClinGen Ensembl |
|
|
rs761829570 CA8600166 |
640 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
VAR_013801 RCV002513121 CA127400 RCV000019352 rs121912758 |
646 | R>W | SW(a+) antigen [UniProt] | No |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
CA8600162 rs745877067 |
647 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA399783241 rs1421570074 |
648 | W>C | No |
ClinGen gnomAD |
|
|
rs372514760 VAR_013802 CA8600158 |
656 | R>C | HG(a) antigen [UniProt] | No |
ClinGen UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
CA8600157 rs758868427 VAR_013803 |
656 | R>H | MO(a) antigen [UniProt] | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
rs1273756688 CA399782973 |
657 | S>A | No |
ClinGen TOPMed |
|
|
CA399782933 rs1253447708 |
658 | E>G | No |
ClinGen TOPMed |
|
|
rs75731670 CA8600155 |
658 | E>Q | Blood group--wright antigen (wr) [Ensembl] | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA399782837 rs757109598 |
661 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA8600152 rs757109598 |
661 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1243520646 CA399782749 |
665 | F>L | No |
ClinGen TOPMed |
|
|
CA8600150 rs763783909 |
667 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8600148 rs368353943 |
668 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
|
CA399782702 rs1598297564 |
668 | A>V | No |
ClinGen Ensembl |
|
|
rs199929662 CA290928466 |
670 | P>A | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1456105061 CA399782675 |
671 | A>V | No |
ClinGen gnomAD |
|
|
CA8600147 rs765515997 |
674 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8600146 rs759861754 |
677 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399782628 rs1320485974 |
678 | I>T | No |
ClinGen TOPMed |
|
|
rs1567830080 CA399782614 |
679 | F>C | No |
ClinGen Ensembl |
|
|
rs748887436 CA8600144 |
685 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs143131877 CA8600142 |
686 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs143131877 CA8600141 |
686 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs5022 CA290927446 VAR_014616 |
688 | I>V | No |
ClinGen UniProt ESP TOPMed dbSNP gnomAD |
|
|
VAR_014617 CA290927445 rs5023 |
690 | S>G | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA399781873 rs1567829407 |
691 | K>R | No |
ClinGen Ensembl |
|
|
rs769075267 CA8600120 |
692 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1382237805 CA399781856 |
694 | R>C | No |
ClinGen gnomAD |
|
|
CA8600119 rs745505408 |
694 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA290927418 rs1043322954 |
696 | M>I | No |
ClinGen gnomAD |
|
|
rs1459280961 CA399781823 |
698 | K>N | No |
ClinGen TOPMed |
|
| TCGA novel | 699 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399781808 rs373796823 |
701 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373796823 CA8600116 |
701 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV001812500 rs2047359576 |
704 | L>P | No |
ClinVar dbSNP |
|
|
CA399781783 rs1598296762 |
705 | D>N | No |
ClinGen Ensembl |
|
|
CA8600115 rs758335896 |
706 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754880533 CA8600113 |
707 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA8600111 rs753703632 |
709 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1200436383 CA399781763 |
709 | V>I | No |
ClinGen gnomAD |
|
|
CA399781756 rs1282994460 |
710 | V>I | No |
ClinGen gnomAD |
|
| TCGA novel | 711 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766559569 CA8600108 |
711 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1598296710 CA399781721 |
715 | V>G | No |
ClinGen Ensembl |
|
|
rs1265303247 CA399781724 |
715 | V>L | No |
ClinGen TOPMed |
|
|
rs762301702 CA8600104 |
721 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA290927319 rs552712872 |
721 | M>L | No |
ClinGen 1000Genomes |
|
|
RCV001813132 rs2047358814 |
723 | W>* | No |
ClinVar dbSNP |
|
|
rs887633016 CA290927304 |
723 | W>L | No |
ClinGen TOPMed |
|
| TCGA novel | 724 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA399781658 rs1314556956 |
725 | S>N | No |
ClinGen gnomAD |
|
|
COSM436694 rs775748758 CA8600100 |
729 | V>M | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA8600099 rs770569237 |
730 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs746691107 CA8600098 |
730 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA399781629 rs746691107 |
730 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs188698576 CA8600096 |
732 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs748087778 CA8600095 COSM3518016 |
735 | A>V | Variant assessed as Somatic; 4.656e-05 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
| TCGA novel | 737 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1196071238 CA399781586 |
738 | L>I | No |
ClinGen gnomAD |
|
|
rs754975303 CA8600092 |
741 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1040413479 CA290927257 |
744 | A>P | No |
ClinGen TOPMed |
|
|
rs935383555 CA290927236 |
751 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs753634892 CA8600091 |
752 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
RCV001290766 rs2047357659 |
762 | S>N | No |
ClinVar dbSNP |
|
|
rs756326359 CA399781409 |
765 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1567829187 CA399781407 RCV000722799 |
765 | L>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA8600089 rs756326359 |
765 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767620009 CA8600087 |
767 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs767620009 COSM3402930 CA8600088 |
767 | A>T | Variant assessed as Somatic; 0.0004477 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA399781393 rs1329261701 |
768 | V>M | No |
ClinGen gnomAD |
|
|
CA8600086 rs757269124 |
770 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA8600059 rs761601838 |
775 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768345613 CA8600057 |
776 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs773964173 CA8600058 |
776 | M>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 777 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8600056 rs749233224 |
778 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA8600051 rs148317876 |
782 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8600052 rs148317876 |
782 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs777827818 CA8600049 |
782 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8600050 rs777827818 COSM706171 |
782 | R>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA290926439 rs888633992 |
784 | P>S | No |
ClinGen TOPMed |
|
| TCGA novel | 785 | L>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA290926435 rs966055404 |
787 | V>A | No |
ClinGen Ensembl |
|
|
rs1396448966 CA399781161 |
787 | V>I | No |
ClinGen gnomAD |
|
|
rs1385615262 CA399781146 |
788 | L>P | No |
ClinGen TOPMed |
|
|
rs755543358 CA8600045 |
793 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA399781063 rs1279430800 |
795 | M>V | No |
ClinGen gnomAD |
|
|
CA8600042 rs761550289 |
797 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 797 | V>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8600041 rs753927017 COSM472879 |
798 | T>M | lung kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs753927017 CA399781028 |
798 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8600040 rs763849606 |
799 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1486545465 CA399780988 |
802 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs868414493 CA290926411 |
805 | L>F | No |
ClinGen Ensembl |
|
|
CA8600035 rs776380562 |
806 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs879062267 CA290925286 |
814 | K>E | No |
ClinGen TOPMed |
|
|
CA399780558 rs770780637 |
814 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs201389834 CA8600033 |
816 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8600032 rs777916348 |
817 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs143794240 CA8600030 |
820 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8600029 rs143794240 |
820 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA290925253 rs1043937637 |
822 | V>M | No |
ClinGen Ensembl |
|
|
CA8600028 rs371349671 |
824 | Y>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA399780413 rs780297314 |
825 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780297314 CA8600027 COSM3787347 |
825 | V>I | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
COSM979922 CA8600025 rs756487315 |
827 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs780549162 CA8600026 |
827 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
CA8600010 rs768851118 |
831 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373517146 CA290925141 |
831 | W>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373517146 CA8600011 |
831 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs571376371 CA8600009 |
832 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
VAR_014618 rs5025 CA8600008 |
832 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen UniProt 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs5025 CA399780248 |
832 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs571376371 RCV001223955 |
832 | R>S | No |
ClinVar dbSNP |
|
|
CA8600007 rs756712442 |
834 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs866415828 CA290925118 |
838 | G>S | No |
ClinGen Ensembl |
|
|
CA8600003 rs752451300 |
846 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1567828052 CA399779982 |
846 | V>L | No |
ClinGen Ensembl |
|
|
CA8600001 rs754416860 |
848 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA8599999 rs567528042 |
850 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA399779916 rs567528042 |
850 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1287164909 CA399779883 |
852 | S>F | No |
ClinGen TOPMed |
|
|
rs1420833243 CA399779869 |
853 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs2285644 CA8599998 |
854 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA399779824 rs1419411396 |
856 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA399779776 rs530808737 |
860 | P>A | No |
ClinGen TOPMed |
|
|
rs530808737 CA290925072 |
860 | P>S | No |
ClinGen TOPMed |
|
|
rs530808737 CA290925081 |
860 | P>T | No |
ClinGen TOPMed |
|
|
rs1468176880 COSM349337 CA399779759 |
861 | F>L | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA8599995 rs768776105 |
863 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1231677586 CA399779610 |
869 | L>Q | No |
ClinGen gnomAD |
|
|
rs746426065 CA290925045 |
870 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746426065 CA8599992 |
870 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs879191534 CA290925040 |
871 | R>C | No |
ClinGen Ensembl |
|
|
rs747337202 CA399779582 |
872 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1011118078 CA290925029 |
873 | L>V | No |
ClinGen Ensembl |
|
| TCGA novel | 874 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 875 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754644528 CA8599987 |
875 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA399779520 rs1567827843 |
876 | L>V | No |
ClinGen Ensembl |
|
|
CA8599983 rs750445146 |
879 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA399779432 rs1426774802 |
880 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA399779423 rs767364927 |
881 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767364927 CA8599982 |
881 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA399779412 rs1436104092 |
882 | E>K | No |
ClinGen TOPMed |
|
|
rs761614805 CA8599981 CA290925014 |
884 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150340150 CA8599957 |
886 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1456357591 CA399779181 |
887 | D>E | No |
ClinGen TOPMed |
|
|
CA290924561 rs267604899 |
887 | D>N | No |
ClinGen Ensembl |
|
|
rs542233229 CA8599956 |
891 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 893 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA290924535 rs749873875 |
896 | D>N | No |
ClinGen Ensembl |
|
|
CA399779055 rs1177966248 |
896 | D>V | No |
ClinGen TOPMed |
|
|
CA399779000 rs1458681694 |
900 | G>A | No |
ClinGen gnomAD |
|
|
rs189300762 CA8599951 |
901 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs189300762 COSM979920 CA8599952 |
901 | R>Q | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs776130740 CA8599949 |
905 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA290924528 rs776130740 |
905 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
RCV001066611 COSM1710362 rs199694087 CA399778920 |
906 | E>K | Variant assessed as Somatic; impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA399778802 rs1394359103 |
911 | V>M | No |
ClinGen TOPMed |
6 associated diseases with P02730
[MIM: 166900]: Ovalocytosis, Southeast Asian (SAO)
A hereditary hematologic disorder characterized by ovalocytic erythrocytes that are rigid and exhibit reduced expression of many erythrocyte antigens. Clinical manifestations include mild hemolysis, intermittent jaundice and gallstones. However, the disorder is most often asymptomatic. {ECO:0000269|PubMed:1538405, ECO:0000269|PubMed:1722314}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 612653]: Spherocytosis 4 (SPH4)
Spherocytosis is a hematologic disorder leading to chronic hemolytic anemia and characterized by numerous abnormally shaped erythrocytes which are generally spheroidal. {ECO:0000269|PubMed:10580570, ECO:0000269|PubMed:10745622, ECO:0000269|PubMed:10942416, ECO:0000269|PubMed:11380459, ECO:0000269|PubMed:1378323, ECO:0000269|PubMed:15813913, ECO:0000269|PubMed:16227998, ECO:0000269|PubMed:7530501, ECO:0000269|PubMed:8547122, ECO:0000269|PubMed:8640229, ECO:0000269|PubMed:8943874, ECO:0000269|PubMed:9012689, ECO:0000269|PubMed:9207478, ECO:0000269|PubMed:9233560, ECO:0000269|PubMed:9973643}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 179800]: Renal tubular acidosis, distal, 1 (DRTA1)
An autosomal dominant disease characterized by reduced ability to acidify urine, variable hyperchloremic hypokalemic metabolic acidosis, nephrocalcinosis, and nephrolithiasis. It is due to functional failure of alpha-intercalated cells of the cortical collecting duct of the distal nephron, where vectorial proton transport is required for urinary acidification. {ECO:0000269|PubMed:10926824, ECO:0000269|PubMed:14734552, ECO:0000269|PubMed:20151848, ECO:0000269|PubMed:9312167, ECO:0000269|PubMed:9600966}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 611590]: Renal tubular acidosis, distal, 4, with hemolytic anemia (DRTA4)
An autosomal recessive disease characterized by the association of hemolytic anemia with distal renal tubular acidosis, the reduced ability to acidify urine resulting in variable hyperchloremic hypokalemic metabolic acidosis, nephrocalcinosis, and nephrolithiasis. {ECO:0000269|PubMed:10926824, ECO:0000269|PubMed:15211439, ECO:0000269|PubMed:20151848, ECO:0000269|PubMed:9854053}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 611590]: Renal tubular acidosis, distal, with normal red cell morphology (dRTA-NRC)
A disease characterized by reduced ability to acidify urine, variable hyperchloremic hypokalemic metabolic acidosis, nephrocalcinosis, and nephrolithiasis. It is due to functional failure of alpha-intercalated cells of the cortical collecting duct of the distal nephron, where vectorial proton transport is required for urinary acidification. {ECO:0000269|PubMed:15211439}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 185020]: Cryohydrocytosis (CHC)
An autosomal dominant disorder of red cell membrane permeability characterized by cold-induced changes in cell volume, resulting in cold-sensitive stomatocytosis, and increased erythrocyte osmotic fragility and autohemolysis at 4 degrees Celsius. Patients present with mild to moderate hemolytic anemia, splenomegaly, fatigue, and pseudohyperkalemia due to a potassium leak from the erythrocytes. {ECO:0000269|PubMed:16227998}. Note=The disease is caused by variants affecting distinct genetic loci, including the gene represented in this entry.
Without disease ID
- A hereditary hematologic disorder characterized by ovalocytic erythrocytes that are rigid and exhibit reduced expression of many erythrocyte antigens. Clinical manifestations include mild hemolysis, intermittent jaundice and gallstones. However, the disorder is most often asymptomatic. {ECO:0000269|PubMed:1538405, ECO:0000269|PubMed:1722314}. Note=The disease is caused by variants affecting the gene represented in this entry.
- Spherocytosis is a hematologic disorder leading to chronic hemolytic anemia and characterized by numerous abnormally shaped erythrocytes which are generally spheroidal. {ECO:0000269|PubMed:10580570, ECO:0000269|PubMed:10745622, ECO:0000269|PubMed:10942416, ECO:0000269|PubMed:11380459, ECO:0000269|PubMed:1378323, ECO:0000269|PubMed:15813913, ECO:0000269|PubMed:16227998, ECO:0000269|PubMed:7530501, ECO:0000269|PubMed:8547122, ECO:0000269|PubMed:8640229, ECO:0000269|PubMed:8943874, ECO:0000269|PubMed:9012689, ECO:0000269|PubMed:9207478, ECO:0000269|PubMed:9233560, ECO:0000269|PubMed:9973643}. Note=The disease is caused by variants affecting the gene represented in this entry.
- An autosomal dominant disease characterized by reduced ability to acidify urine, variable hyperchloremic hypokalemic metabolic acidosis, nephrocalcinosis, and nephrolithiasis. It is due to functional failure of alpha-intercalated cells of the cortical collecting duct of the distal nephron, where vectorial proton transport is required for urinary acidification. {ECO:0000269|PubMed:10926824, ECO:0000269|PubMed:14734552, ECO:0000269|PubMed:20151848, ECO:0000269|PubMed:9312167, ECO:0000269|PubMed:9600966}. Note=The disease is caused by variants affecting the gene represented in this entry.
- An autosomal recessive disease characterized by the association of hemolytic anemia with distal renal tubular acidosis, the reduced ability to acidify urine resulting in variable hyperchloremic hypokalemic metabolic acidosis, nephrocalcinosis, and nephrolithiasis. {ECO:0000269|PubMed:10926824, ECO:0000269|PubMed:15211439, ECO:0000269|PubMed:20151848, ECO:0000269|PubMed:9854053}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A disease characterized by reduced ability to acidify urine, variable hyperchloremic hypokalemic metabolic acidosis, nephrocalcinosis, and nephrolithiasis. It is due to functional failure of alpha-intercalated cells of the cortical collecting duct of the distal nephron, where vectorial proton transport is required for urinary acidification. {ECO:0000269|PubMed:15211439}. Note=The disease is caused by variants affecting the gene represented in this entry.
- An autosomal dominant disorder of red cell membrane permeability characterized by cold-induced changes in cell volume, resulting in cold-sensitive stomatocytosis, and increased erythrocyte osmotic fragility and autohemolysis at 4 degrees Celsius. Patients present with mild to moderate hemolytic anemia, splenomegaly, fatigue, and pseudohyperkalemia due to a potassium leak from the erythrocytes. {ECO:0000269|PubMed:16227998}. Note=The disease is caused by variants affecting distinct genetic loci, including the gene represented in this entry.
5 regional properties for P02730
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Bicarbonate transporter-like, transmembrane domain | 378 - 554 | IPR011531-1 |
| domain | Bicarbonate transporter-like, transmembrane domain | 566 - 839 | IPR011531-2 |
| domain | Band 3 cytoplasmic domain | 87 - 329 | IPR013769 |
| conserved_site | Anion exchange, conserved site | 379 - 390 | IPR018241-1 |
| conserved_site | Anion exchange, conserved site | 526 - 540 | IPR018241-2 |
Functions
9 GO annotations of cellular component
| Name | Definition |
|---|---|
| basolateral plasma membrane | The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis. |
| blood microparticle | A phospholipid microvesicle that is derived from any of several cell types, such as platelets, blood cells, endothelial cells, or others, and contains membrane receptors as well as other proteins characteristic of the parental cell. Microparticles are heterogeneous in size, and are characterized as microvesicles free of nucleic acids. |
| cortical cytoskeleton | The portion of the cytoskeleton that lies just beneath the plasma membrane. |
| cytoplasmic side of plasma membrane | The leaflet the plasma membrane that faces the cytoplasm and any proteins embedded or anchored in it or attached to its surface. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| Z disc | Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached. |
9 GO annotations of molecular function
| Name | Definition |
|---|---|
| anion transmembrane transporter activity | Enables the transfer of a negatively charged ion from one side of a membrane to the other. |
| ankyrin binding | Binding to ankyrin, a 200 kDa cytoskeletal protein that attaches other cytoskeletal proteins to integral membrane proteins. |
| bicarbonate transmembrane transporter activity | Enables the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3-. |
| chloride transmembrane transporter activity | Enables the transfer of chloride ions from one side of a membrane to the other. |
| hemoglobin binding | Binding to hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin. |
| protein homodimerization activity | Binding to an identical protein to form a homodimer. |
| protein-membrane adaptor activity | The binding activity of a molecule that brings together a protein or a protein complex with a membrane, or bringing together two membranes, either via membrane lipid binding or by interacting with a membrane protein, to establish or maintain the localization of the protein, protein complex or organelle. |
| solute:inorganic anion antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: inorganic anion(out) + solute(in) = inorganic anion (in) + solute(out). |
| transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
16 GO annotations of biological process
| Name | Definition |
|---|---|
| anion transport | The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| bicarbonate transport | The directed movement of bicarbonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| blood coagulation | The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers. |
| cellular ion homeostasis | Any process involved in the maintenance of an internal steady state of ions at the level of a cell. |
| chloride transmembrane transport | The process in which chloride is transported across a membrane. |
| chloride transport | The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| erythrocyte development | The process whose specific outcome is the progression of an erythrocyte over time, from its formation to the mature structure. |
| ion homeostasis | Any process involved in the maintenance of an internal steady state of ions within an organism or cell. |
| negative regulation of glycolytic process through fructose-6-phosphate | Any process that stops, prevents or reduces the frequency, rate or extent of glycolytic process through fructose-6-phosphate. |
| negative regulation of oxidoreductase activity | Any process that stops or reduces the rate of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. |
| negative regulation of urine volume | Any process that decreases the amount of urine excreted from the body over a unit of time. |
| pH elevation | Any process that increases the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion. |
| plasma membrane phospholipid scrambling | The movement of a population of phospholipid molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet, resulting in loss of lipid asymmetry and surface exposure of phosphatidylserine (PS) and phosphatidylethanolamine (PE). |
| protein localization to plasma membrane | A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane. |
| regulation of intracellular pH | Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion. |
| transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
24 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9GL77 | SLC4A4 | Electrogenic sodium bicarbonate cotransporter 1 | Bos taurus (Bovine) | PR |
| Q32LP4 | SLC4A10 | Sodium-driven chloride bicarbonate exchanger | Bos taurus (Bovine) | PR |
| Q8NBS3 | SLC4A11 | Solute carrier family 4 member 11 | Homo sapiens (Human) | PR |
| Q9Y6R1 | SLC4A4 | Electrogenic sodium bicarbonate cotransporter 1 | Homo sapiens (Human) | PR |
| Q9Y6M7 | SLC4A7 | Sodium bicarbonate cotransporter 3 | Homo sapiens (Human) | PR |
| Q6U841 | SLC4A10 | Sodium-driven chloride bicarbonate exchanger | Homo sapiens (Human) | PR |
| Q2Y0W8 | SLC4A8 | Electroneutral sodium bicarbonate exchanger 1 | Homo sapiens (Human) | PR |
| P04920 | SLC4A2 | Anion exchange protein 2 | Homo sapiens (Human) | PR |
| Q8JZR6 | Slc4a8 | Electroneutral sodium bicarbonate exchanger 1 | Mus musculus (Mouse) | PR |
| Q8BTY2 | Slc4a7 | Sodium bicarbonate cotransporter 3 | Mus musculus (Mouse) | PR |
| P13808 | Slc4a2 | Anion exchange protein 2 | Mus musculus (Mouse) | PR |
| A2AJN7 | Slc4a11 | Solute carrier family 4 member 11 | Mus musculus (Mouse) | PR |
| Q5DTL9 | Slc4a10 | Sodium-driven chloride bicarbonate exchanger | Mus musculus (Mouse) | PR |
| P16283 | Slc4a3 | Anion exchange protein 3 | Mus musculus (Mouse) | PR |
| O88343 | Slc4a4 | Electrogenic sodium bicarbonate cotransporter 1 | Mus musculus (Mouse) | PR |
| P04919 | Slc4a1 | Band 3 anion transport protein | Mus musculus (Mouse) | PR |
| Q4U116 | SLC4A4 | Electrogenic sodium bicarbonate cotransporter 1 | Sus scrofa (Pig) | PR |
| Q9JI66 | Slc4a4 | Electrogenic sodium bicarbonate cotransporter 1 | Rattus norvegicus (Rat) | PR |
| Q9R1N3 | Slc4a7 | Sodium bicarbonate cotransporter 3 | Rattus norvegicus (Rat) | PR |
| Q80ZA5 | Slc4a10 | Sodium-driven chloride bicarbonate exchanger | Rattus norvegicus (Rat) | PR |
| Q3E954 | BOR6 | Probable boron transporter 6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M1P7 | BOR2 | Probable boron transporter 2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SUU1 | BOR7 | Probable boron transporter 7 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8VYR7 | BOR1 | Boron transporter 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEELQDDYED | MMEENLEQEE | YEDPDIPESQ | MEEPAAHDTE | ATATDYHTTS | HPGTHKVYVE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LQELVMDEKN | QELRWMEAAR | WVQLEENLGE | NGAWGRPHLS | HLTFWSLLEL | RRVFTKGTVL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LDLQETSLAG | VANQLLDRFI | FEDQIRPQDR | EELLRALLLK | HSHAGELEAL | GGVKPAVLTR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SGDPSQPLLP | QHSSLETQLF | CEQGDGGTEG | HSPSGILEKI | PPDSEATLVL | VGRADFLEQP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VLGFVRLQEA | AELEAVELPV | PIRFLFVLLG | PEAPHIDYTQ | LGRAAATLMS | ERVFRIDAYM |
| 310 | 320 | 330 | 340 | 350 | 360 |
| AQSRGELLHS | LEGFLDCSLV | LPPTDAPSEQ | ALLSLVPVQR | ELLRRRYQSS | PAKPDSSFYK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| GLDLNGGPDD | PLQQTGQLFG | GLVRDIRRRY | PYYLSDITDA | FSPQVLAAVI | FIYFAALSPA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ITFGGLLGEK | TRNQMGVSEL | LISTAVQGIL | FALLGAQPLL | VVGFSGPLLV | FEEAFFSFCE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| TNGLEYIVGR | VWIGFWLILL | VVLVVAFEGS | FLVRFISRYT | QEIFSFLISL | IFIYETFSKL |
| 550 | 560 | 570 | 580 | 590 | 600 |
| IKIFQDHPLQ | KTYNYNVLMV | PKPQGPLPNT | ALLSLVLMAG | TFFFAMMLRK | FKNSSYFPGK |
| 610 | 620 | 630 | 640 | 650 | 660 |
| LRRVIGDFGV | PISILIMVLV | DFFIQDTYTQ | KLSVPDGFKV | SNSSARGWVI | HPLGLRSEFP |
| 670 | 680 | 690 | 700 | 710 | 720 |
| IWMMFASALP | ALLVFILIFL | ESQITTLIVS | KPERKMVKGS | GFHLDLLLVV | GMGGVAALFG |
| 730 | 740 | 750 | 760 | 770 | 780 |
| MPWLSATTVR | SVTHANALTV | MGKASTPGAA | AQIQEVKEQR | ISGLLVAVLV | GLSILMEPIL |
| 790 | 800 | 810 | 820 | 830 | 840 |
| SRIPLAVLFG | IFLYMGVTSL | SGIQLFDRIL | LLFKPPKYHP | DVPYVKRVKT | WRMHLFTGIQ |
| 850 | 860 | 870 | 880 | 890 | 900 |
| IICLAVLWVV | KSTPASLALP | FVLILTVPLR | RVLLPLIFRN | VELQCLDADD | AKATFDEEEG |
| 910 | |||||
| RDEYDEVAMP | V |