Q7L1I2
Gene name |
SV2B (KIAA0735) |
Protein name |
Synaptic vesicle glycoprotein 2B |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:9899 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q7L1I2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q7L1I2-F1 | Predicted | AlphaFoldDB |
546 variants for Q7L1I2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA174311 RCV000149081 rs193920952 COSM1178706 |
513 | R>W | Malignant tumor of prostate prostate [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1252821483 CA393919551 |
2 | D>N | No |
ClinGen gnomAD |
|
|
rs1460732831 CA393919594 |
4 | Y>C | No |
ClinGen gnomAD |
|
|
rs775223820 CA7745266 |
4 | Y>N | No |
ClinGen ExAC gnomAD |
|
|
rs762705345 CA7745267 |
7 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393919649 rs1165528483 |
8 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA393919651 rs1165528483 |
8 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA393919669 rs1157777639 |
9 | N>D | No |
ClinGen gnomAD |
|
|
CA275172706 rs1031131951 |
9 | N>T | No |
ClinGen TOPMed |
|
|
rs1426533690 CA393919688 |
10 | Y>H | No |
ClinGen TOPMed |
|
|
rs1173720407 CA393919701 |
11 | G>R | No |
ClinGen Ensembl |
|
|
CA275172707 rs376979688 |
12 | G>V | No |
ClinGen ESP TOPMed |
|
|
CA393919731 rs1472483637 |
13 | Y>C | No |
ClinGen TOPMed |
|
|
rs774267988 CA7745269 |
14 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA7745268 rs148343244 |
14 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 16 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1384881649 CA393919779 |
16 | S>R | No |
ClinGen gnomAD |
|
|
CA393919802 rs1331902247 |
18 | G>D | No |
ClinGen gnomAD |
|
|
CA7745270 rs761660483 |
18 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA393919800 rs1331902247 |
18 | G>V | No |
ClinGen gnomAD |
|
|
CA7745272 rs200518168 |
19 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7745273 rs141522931 |
21 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7745274 rs141522931 |
21 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7745275 rs753020617 |
21 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA7745278 rs747449949 |
22 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA7745277 rs150480705 COSM1375507 |
22 | G>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs776455226 CA7745279 |
23 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1025737786 CA275172709 |
26 | N>S | No |
ClinGen TOPMed |
|
|
rs780701301 CA7745280 |
27 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA393919950 rs1458386131 |
28 | E>A | No |
ClinGen gnomAD |
|
|
CA393919962 rs200028214 |
29 | E>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200028214 CA7745282 |
29 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1343595361 CA393919987 |
30 | D>V | No |
ClinGen TOPMed |
|
|
rs1322757379 CA393920034 |
33 | S>G | No |
ClinGen TOPMed |
|
|
rs748998104 CA7745284 |
37 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA393920133 rs1423114344 |
39 | H>D | No |
ClinGen TOPMed |
|
|
rs1368553103 CA393920140 |
39 | H>R | No |
ClinGen gnomAD |
|
|
rs768373965 CA7745285 |
41 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs761763850 CA7745287 |
44 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1229116184 CA393920194 |
45 | I>F | No |
ClinGen gnomAD |
|
|
CA393920204 rs1312565490 |
46 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
rs771936032 CA7745288 |
47 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA7745290 rs759514782 |
49 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA393920220 rs1266462251 |
49 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA393920231 rs1249190335 |
50 | Y>C | No |
ClinGen gnomAD |
|
|
rs372807985 CA7745292 |
53 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372807985 CA393920250 |
53 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1422042529 CA393920265 |
55 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA393920269 rs1350298357 |
56 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs751888588 CA7745295 |
57 | D>H | No |
ClinGen ExAC gnomAD |
|
|
COSM107877 CA275172712 rs147636814 |
58 | D>N | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA393920290 rs1306358609 |
59 | V>F | No |
ClinGen gnomAD |
|
|
rs1263329403 CA393920307 |
61 | A>G | No |
ClinGen TOPMed |
|
|
rs781517515 CA7745297 |
65 | K>R | No |
ClinGen ExAC |
|
|
rs750988407 CA7745298 |
67 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA275172714 rs750988407 |
67 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1230570278 CA393920356 |
68 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs267604388 CA7745301 |
69 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs769596186 CA7745302 |
70 | R>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 70 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768320974 CA7745304 |
71 | M>T | No |
ClinGen ExAC |
|
|
rs922595667 CA275172716 |
71 | M>V | No |
ClinGen Ensembl |
|
|
CA393920378 rs1271952827 |
72 | D>G | No |
ClinGen gnomAD |
|
|
rs867130699 CA275172717 |
72 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
COSM1375508 rs1464285791 CA393920384 |
73 | S>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA393920388 rs1442919125 CA393920389 |
73 | S>R | No |
ClinGen TOPMed |
|
|
rs1596625162 CA393920391 |
74 | L>V | No |
ClinGen Ensembl |
|
|
rs35575298 CA7745306 |
75 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201612018 CA7745305 COSM1301588 |
75 | R>W | Variant assessed as Somatic; 0.0001849 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA7745307 rs771953166 |
76 | G>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1177358571 CA393920401 |
76 | G>D | No |
ClinGen TOPMed |
|
|
CA7745309 rs760736791 |
78 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7745310 rs769924724 |
78 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA275172718 rs769924724 |
78 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA275172719 rs372824872 |
79 | D>E | No |
ClinGen ESP TOPMed |
|
|
rs775720759 CA7745311 |
84 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3720269 rs200837218 CA7745312 |
84 | R>S | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA393920459 rs1176270335 |
85 | L>R | No |
ClinGen TOPMed |
|
|
rs1596625360 CA393920463 |
86 | E>G | No |
ClinGen Ensembl |
|
|
rs1357459107 CA393920473 |
87 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1357459107 CA393920472 |
87 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
rs764440020 CA7745313 |
88 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA7745314 rs200378766 |
90 | Q>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1365105341 CA393920496 |
90 | Q>H | No |
ClinGen gnomAD |
|
|
rs1596625401 CA393920502 |
91 | L>W | No |
ClinGen Ensembl |
|
|
CA393920523 rs1433340851 |
94 | Q>R | No |
ClinGen gnomAD |
|
|
CA7745316 rs767982613 |
96 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750889605 CA7745317 |
97 | T>I | No |
ClinGen ExAC |
|
|
CA393920547 rs1214842219 |
98 | I>V | No |
ClinGen gnomAD |
|
|
rs779490817 CA7745319 |
99 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147254728 CA7745318 |
99 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs946531726 CA275172721 |
101 | E>K | No |
ClinGen TOPMed |
|
|
CA275172724 rs904910363 |
104 | H>D | No |
ClinGen Ensembl |
|
|
CA275172725 rs1025259734 |
104 | H>R | No |
ClinGen TOPMed |
|
|
CA7745320 rs753378261 |
106 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1243610540 CA393920604 |
106 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA7745321 rs754523967 |
108 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA393920619 rs1596625676 |
108 | Q>R | No |
ClinGen Ensembl |
|
|
CA393920630 rs1249714122 |
109 | W>C | No |
ClinGen gnomAD |
|
|
CA7745324 rs758126909 |
112 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA393920645 rs1383257589 |
112 | F>L | No |
ClinGen gnomAD |
|
|
rs149370473 CA275172727 |
113 | F>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs746858920 CA7745326 COSM198052 |
114 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA393920659 rs746858920 |
114 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs78104358 CA393920668 CA275172729 |
115 | L>F | No |
ClinGen gnomAD |
|
|
rs993206149 CA275172730 |
116 | G>D | No |
ClinGen gnomAD |
|
|
rs1366333868 CA393920679 |
117 | L>F | No |
ClinGen gnomAD |
|
|
rs775669399 CA7745328 |
117 | L>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 119 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749345890 CA7745329 |
119 | L>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 121 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1273823215 CA393920704 |
121 | A>V | No |
ClinGen gnomAD |
|
|
CA275172731 rs1033979803 |
122 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA7745331 rs774422650 |
122 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA393920714 rs762162154 |
123 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA275172732 rs201835444 |
123 | G>R | No |
ClinGen Ensembl |
|
|
CA7745332 rs762162154 |
123 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA393920711 rs201835444 |
123 | G>W | No |
ClinGen Ensembl |
|
|
rs1596625983 CA393920719 |
124 | V>G | No |
ClinGen Ensembl |
|
|
rs1206789617 CA393920726 |
125 | E>V | No |
ClinGen gnomAD |
|
|
CA393920729 rs1269963865 |
126 | V>M | No |
ClinGen gnomAD |
|
|
COSM3817087 CA7745334 rs773650229 |
128 | V>M | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA7745336 rs766842438 |
130 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753088603 CA275172733 |
132 | A>T | No |
ClinGen Ensembl |
|
|
CA393920781 rs1411373759 |
134 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs142186906 CA7745339 |
135 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1182313952 CA393920822 |
140 | M>L | No |
ClinGen gnomAD |
|
|
CA7745340 rs752228071 |
141 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1382658874 CA393920844 |
143 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1283596613 CA393920848 |
143 | S>Y | No |
ClinGen TOPMed |
|
|
rs758080064 CA7745341 |
144 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA7745343 rs746828560 |
145 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1406444029 CA393920861 |
146 | K>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1283335380 CA393920882 |
148 | G>E | No |
ClinGen gnomAD |
|
| TCGA novel | 148 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781250698 CA7745345 CA393920889 |
149 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1377280071 CA393920896 |
151 | G>R | No |
ClinGen TOPMed |
|
|
rs778818870 CA7745366 |
152 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA275175551 rs1042000586 |
153 | I>M | No |
ClinGen Ensembl |
|
|
rs944904093 CA275175550 |
153 | I>V | No |
ClinGen Ensembl |
|
|
CA393922867 rs1251398280 |
154 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA7745367 rs748229273 |
157 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA7745368 rs146271108 |
160 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA393922917 rs1445544495 |
161 | G>V | No |
ClinGen gnomAD |
|
|
CA7745372 COSM966646 rs372020741 |
162 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA393922943 rs1427473410 |
166 | G>R | No |
ClinGen gnomAD |
|
|
rs759983195 CA7745373 |
171 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA393923028 rs1261711865 |
174 | R>K | No |
ClinGen TOPMed |
|
|
COSM966647 CA393923042 rs770360729 |
176 | R>* | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs770360729 CA7745374 |
176 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs79725910 CA7745376 |
176 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs79725910 CA7745375 |
176 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA393923073 rs1384914841 |
179 | S>R | No |
ClinGen gnomAD |
|
|
rs915668107 CA275175555 |
180 | M>I | No |
ClinGen TOPMed |
|
|
CA7745378 CA7745379 rs765964793 |
180 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs536730683 CA275175554 |
180 | M>T | No |
ClinGen Ensembl |
|
|
rs1340274841 CA393923099 |
181 | S>F | No |
ClinGen gnomAD |
|
|
rs143979505 COSM169144 CA7745382 |
184 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine urinary_tract haematopoietic_and_lymphoid_tissue [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs77204250 CA7745383 |
185 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA275175556 rs1015476941 |
186 | A>V | No |
ClinGen gnomAD |
|
|
COSM2140669 rs200150672 CA7745386 |
189 | A>T | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA7745387 rs547706465 |
191 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs771169038 CA7745388 |
191 | L>H | No |
ClinGen ExAC gnomAD |
|
|
CA393923251 rs1434386548 |
194 | F>V | No |
ClinGen TOPMed |
|
|
rs1421967562 CA393923274 |
195 | V>A | No |
ClinGen TOPMed |
|
|
CA275175558 rs776050433 |
195 | V>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA7745392 rs776050433 |
195 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs369065381 CA7745393 |
197 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs774010844 CA7745395 |
200 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393923336 rs774010844 |
200 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs566828523 CA7745394 |
200 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA393923338 rs774010844 |
200 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393923342 rs1383729548 |
201 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1238460798 CA393923383 |
203 | F>L | No |
ClinGen TOPMed |
|
|
CA393923369 rs1567394870 |
203 | F>L | No |
ClinGen Ensembl |
|
|
CA7745397 COSM966648 rs767247777 |
205 | R>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs750150251 CA393923406 |
205 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7745398 rs750150251 |
205 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs760507104 CA7745399 |
207 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1567394923 CA393923453 |
208 | S>* | No |
ClinGen Ensembl |
|
|
CA7745400 rs766155861 |
209 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs61731608 CA275175560 |
210 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA393923488 rs1487018721 |
211 | G>A | No |
ClinGen gnomAD |
|
|
rs754888193 CA7745402 |
211 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs145534909 CA7745425 |
212 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 214 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA393923582 rs1305123999 |
214 | G>C | No |
ClinGen gnomAD |
|
|
CA7745426 rs756304643 |
214 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393923581 rs1305123999 |
214 | G>R | No |
ClinGen gnomAD |
|
|
rs1409286143 CA393923590 |
215 | A>T | No |
ClinGen gnomAD |
|
|
rs1425750662 CA393923604 |
216 | L>V | No |
ClinGen TOPMed |
|
|
rs750714458 CA275175592 |
217 | P>A | No |
ClinGen Ensembl |
|
|
rs1446315930 CA393923619 COSM315690 |
217 | P>L | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA275175594 rs201136240 |
218 | I>N | No |
ClinGen Ensembl |
|
| rs1210452364 | 220 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749584517 CA7745428 |
222 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393923685 rs1271506522 |
223 | F>V | No |
ClinGen TOPMed |
|
|
CA275175595 rs780342749 COSM2140673 |
229 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs148980578 CA7745429 |
229 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA393923735 rs1359782676 |
230 | E>D | No |
ClinGen gnomAD |
|
|
rs202215568 CA275175597 |
232 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs779548438 CA7745430 |
232 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 234 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 234 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA393923768 rs1250077897 |
235 | H>Q | No |
ClinGen gnomAD |
|
|
rs779461611 CA7745431 |
236 | L>* | No |
ClinGen ExAC |
|
|
CA393923772 rs1481346147 |
236 | L>H | No |
ClinGen gnomAD |
|
|
rs748729632 CA7745432 |
236 | L>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 237 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7745433 rs771638877 |
240 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA393923832 rs772607628 CA7745434 |
244 | M>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC gnomAD NCI-TCGA |
|
CA393923835 rs1326293741 |
245 | T>A | No |
ClinGen TOPMed |
|
|
CA393923865 rs1376781395 |
250 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs761968913 CA275175598 |
252 | A>S | No |
ClinGen Ensembl |
|
|
CA7745438 rs759308630 |
252 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393923889 rs1377631076 |
253 | M>I | No |
ClinGen gnomAD |
|
|
CA393923885 rs1302721063 |
253 | M>T | No |
ClinGen gnomAD |
|
|
CA393923882 rs1443052477 |
253 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA7745440 rs775404297 |
256 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs765078364 CA7745439 |
256 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1359668406 CA393923913 |
257 | I>F | No |
ClinGen gnomAD |
|
|
rs1359668406 CA393923911 |
257 | I>L | No |
ClinGen gnomAD |
|
|
rs1227161069 CA393923920 |
258 | I>F | No |
ClinGen gnomAD |
|
| TCGA novel | 261 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1475891461 CA393923966 |
262 | G>A | No |
ClinGen gnomAD |
|
|
CA393924000 rs138530686 |
267 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7745458 rs138530686 |
267 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 268 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1481472446 CA393924018 COSM966650 |
269 | T>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA7745461 rs760657276 |
270 | N>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 272 | H>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA393924072 rs1459801970 |
276 | W>* | No |
ClinGen Ensembl |
|
|
rs766546831 CA7745462 |
277 | R>* | No |
ClinGen ExAC gnomAD |
|
|
CA7745463 rs529483891 |
277 | R>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA393924076 rs529483891 |
277 | R>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA393924084 rs1596714269 |
278 | V>A | No |
ClinGen Ensembl |
|
| TCGA novel | 278 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA393924098 rs1273914321 |
280 | V>A | No |
ClinGen gnomAD |
|
|
CA393924095 rs1477549127 |
280 | V>F | No |
ClinGen TOPMed |
|
|
CA393924096 rs1477549127 |
280 | V>I | No |
ClinGen TOPMed |
|
|
CA7745466 rs753139153 COSM556597 |
282 | V>I | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs753139153 CA7745467 |
282 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1246547210 CA393924135 |
286 | P>L | No |
ClinGen TOPMed |
|
|
rs1205673929 CA393924137 |
287 | C>R | No |
ClinGen TOPMed |
|
|
CA275176241 rs564149748 |
289 | V>M | No |
ClinGen gnomAD |
|
|
rs752170850 CA7745469 |
290 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393924161 rs1221848528 |
291 | M>V | No |
ClinGen gnomAD |
|
|
rs1198520142 CA393924177 |
293 | A>S | No |
ClinGen TOPMed |
|
|
rs1323691345 CA393924201 |
296 | F>L | No |
ClinGen TOPMed |
|
|
rs1447394209 CA393924214 |
298 | P>L | No |
ClinGen gnomAD |
|
|
rs756720889 CA7745470 |
300 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs370803593 CA7745471 |
301 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA393924237 rs745467646 |
302 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA393924243 rs146910981 |
302 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs745467646 CA393924238 |
302 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA393924290 CA393924288 rs1162138690 |
307 | M>I | No |
ClinGen gnomAD |
|
|
CA7745496 rs779667107 |
309 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1567404914 CA393924308 |
310 | H>R | No |
ClinGen Ensembl |
|
|
rs199587466 CA275176448 |
311 | D>G | No |
ClinGen TOPMed |
|
|
CA393924313 rs749006410 |
311 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs749006410 CA7745497 |
311 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA393924322 rs1305042682 |
312 | E>G | No |
ClinGen TOPMed |
|
|
CA393924330 rs1370163133 |
313 | A>G | No |
ClinGen TOPMed |
|
|
rs1395078024 CA393924356 |
316 | I>M | No |
ClinGen gnomAD |
|
|
rs1331910936 CA393924372 |
319 | Q>E | No |
ClinGen TOPMed |
|
|
CA275176449 rs912321497 |
320 | V>I | No |
ClinGen TOPMed |
|
|
CA7745499 rs778780394 |
321 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1407725078 CA393924386 |
321 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA7745500 rs141421187 |
323 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA393924402 rs772075354 |
323 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA7745501 rs772075354 |
323 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1327155104 CA393924409 |
324 | N>K | No |
ClinGen TOPMed |
|
|
CA7745502 rs773318473 |
325 | M>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA393924437 rs1596719857 |
328 | K>R | No |
ClinGen Ensembl |
|
|
CA275176452 rs918837293 |
329 | G>E | No |
ClinGen Ensembl |
|
|
CA7745504 rs373616246 |
330 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA393924445 rs1596719882 |
330 | T>P | No |
ClinGen Ensembl |
|
|
CA393924483 rs1274322333 |
335 | F>C | No |
ClinGen gnomAD |
|
|
CA7745507 rs149291154 |
336 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs758082542 CA275177236 |
339 | N>K | No |
ClinGen Ensembl |
|
|
CA7745530 rs754134799 |
339 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393919044 rs1487071078 |
340 | I>M | No |
ClinGen gnomAD |
|
|
CA393919038 rs1259376950 |
340 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA275177237 rs754984423 |
342 | T>I | No |
ClinGen Ensembl |
|
|
rs1459076163 CA393919063 |
343 | P>L | No |
ClinGen TOPMed |
|
|
CA393919068 rs1366530904 |
344 | K>R | No |
ClinGen TOPMed |
|
|
CA393919073 rs201461258 |
345 | Q>E | No |
ClinGen TOPMed |
|
|
rs201461258 CA275177238 |
345 | Q>K | No |
ClinGen TOPMed |
|
|
rs761182861 CA7745531 |
346 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1029698319 CA275177239 |
346 | M>V | No |
ClinGen Ensembl |
|
|
rs1263474079 CA393919094 |
348 | E>K | No |
ClinGen gnomAD |
|
|
CA7745532 rs561238419 |
349 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA393919103 rs561238419 |
349 | F>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs988512294 CA275177241 |
350 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1029203758 CA275177240 |
350 | I>V | No |
ClinGen TOPMed |
|
|
CA393919121 rs1487353517 |
351 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1480753224 CA393919126 |
352 | I>T | No |
ClinGen gnomAD |
|
|
rs1337933840 CA393919136 |
353 | Q>H | No |
ClinGen Ensembl |
|
|
rs957596866 CA275177242 |
354 | S>G | No |
ClinGen TOPMed |
|
|
CA7745533 rs753416115 |
355 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs989121166 COSM3706824 CA275177243 |
357 | G>E | liver [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs914943332 CA275177244 |
358 | T>A | No |
ClinGen TOPMed |
|
|
rs1159294794 CA393919164 |
358 | T>I | No |
ClinGen gnomAD |
|
|
rs1020966598 CA275177245 |
360 | Y>C | No |
ClinGen Ensembl |
|
|
COSM72858 CA7745535 rs764917348 |
362 | R>C | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA7745536 rs146788122 |
362 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA393919191 rs146788122 |
362 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1391280412 CA393919199 |
363 | W>C | No |
ClinGen gnomAD |
|
|
CA393919205 rs1319284558 |
364 | L>P | No |
ClinGen TOPMed |
|
|
rs1596737611 CA393919212 |
365 | V>G | No |
ClinGen Ensembl |
|
| TCGA novel | 366 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1319047656 CA393919234 |
368 | K>N | No |
ClinGen gnomAD |
|
|
CA275177247 rs926556402 |
369 | T>S | No |
ClinGen TOPMed |
|
|
CA393919244 rs1286281303 |
370 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1240215267 CA393919242 |
370 | I>V | No |
ClinGen gnomAD |
|
|
rs1358359507 CA393919252 |
371 | F>S | No |
ClinGen gnomAD |
|
|
CA275177248 rs937819737 |
372 | K>R | No |
ClinGen Ensembl |
|
|
rs1219598592 CA393919265 |
373 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA393919263 rs1219598592 |
373 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
rs752330674 CA7745556 |
376 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs374502775 CA7745557 |
377 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7745558 rs763935279 |
378 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA393919332 rs751434328 |
381 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751434328 CA7745559 |
381 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs555144842 CA7745560 |
382 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1222757743 CA393919357 |
384 | G>E | No |
ClinGen TOPMed |
|
|
CA393919355 rs146252262 |
384 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7745561 rs146252262 |
384 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7745563 rs369487799 |
385 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 387 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 387 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7745566 rs144134786 |
395 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs144134786 CA7745565 |
395 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1484996008 CA393919432 |
396 | V>F | No |
ClinGen gnomAD |
|
|
CA275177334 rs771253482 |
397 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393919441 rs1199138499 |
397 | W>C | No |
ClinGen gnomAD |
|
|
CA7745569 rs771253482 |
397 | W>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1459249379 CA393919445 |
398 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA393919458 rs1459762091 |
400 | M>V | No |
ClinGen gnomAD |
|
|
CA393919468 rs1391937950 |
401 | A>T | No |
ClinGen TOPMed |
|
|
rs1347646539 CA393919504 |
404 | Y>C | No |
ClinGen TOPMed |
|
|
rs1226024035 CA393919512 |
405 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs757571456 CA7745588 |
411 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393919586 rs1280852974 |
412 | P>L | No |
ClinGen gnomAD |
|
|
CA393919613 rs1481727004 |
414 | M>K | No |
ClinGen TOPMed gnomAD |
|
|
CA393919609 rs1481727004 |
414 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1267348286 CA393919605 |
414 | M>V | No |
ClinGen gnomAD |
|
|
CA7745589 COSM3771934 rs148600928 |
416 | R>C | pancreas [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA7745590 rs28575545 |
416 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA393919637 rs28575545 |
416 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA275177403 rs28575545 |
416 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7745592 rs776183422 |
417 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1400069438 CA393919680 |
420 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 421 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA275177404 rs982591066 |
423 | Y>C | No |
ClinGen TOPMed |
|
|
CA7745595 rs774143432 |
427 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1349613881 CA393919825 |
430 | F>I | No |
ClinGen gnomAD |
|
|
rs1407160855 CA393919857 |
432 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1021540554 CA275177406 |
433 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
CA275177405 rs986045494 |
433 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA7745599 rs760556310 |
434 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA275177407 rs977415405 |
435 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs758463715 CA7745602 |
437 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA7745601 rs753827490 |
437 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM2155347 rs77109752 CA7745604 |
438 | A>T | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs757447552 CA7745605 |
439 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA393919935 rs1419973507 |
440 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
COSM1323757 CA7745606 rs781583501 |
442 | F>L | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs781583501 CA393919954 |
442 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750726094 CA7745607 |
443 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA7745608 rs756551489 |
443 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 446 | N>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs142544908 CA7745611 |
448 | I>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749878408 CA7745610 |
448 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs778586878 CA7745612 |
449 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA275177409 rs910093345 |
450 | Q>* | No |
ClinGen TOPMed |
|
|
CA7745613 rs747795228 |
451 | H>D | No |
ClinGen ExAC gnomAD |
|
|
CA7745614 rs771592682 |
451 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747795228 CA393920064 |
451 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA7745615 rs146893681 |
453 | K>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7745616 rs560698232 |
454 | L>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA393920101 rs1361594729 |
454 | L>P | No |
ClinGen gnomAD |
|
|
rs1210579356 CA619865151 |
456 | N>S | No |
ClinGen gnomAD |
|
|
CA393920120 rs1272908551 |
456 | N>T | No |
ClinGen gnomAD |
|
|
rs770774753 CA7745618 |
458 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs750546987 CA7745643 |
460 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA275178941 rs749765911 |
461 | R>T | No |
ClinGen Ensembl |
|
|
CA393920959 rs1401931086 |
464 | F>L | No |
ClinGen gnomAD |
|
| TCGA novel | 464 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1279388206 CA393920972 |
466 | H>R | No |
ClinGen gnomAD |
|
|
rs138977226 CA393920983 |
468 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7745644 rs138977226 |
468 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs754222295 CA7745646 |
476 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs950120134 CA275178943 |
482 | V>I | No |
ClinGen TOPMed |
|
|
rs765825421 CA7745648 |
483 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1195286061 CA393921095 |
483 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
CA275178944 rs72750217 |
485 | T>K | No |
ClinGen 1000Genomes |
|
|
CA393921112 rs1480092828 |
486 | D>V | No |
ClinGen gnomAD |
|
|
rs1318139131 CA393921118 |
487 | T>A | No |
ClinGen TOPMed |
|
|
rs777347621 CA7745651 |
487 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA7745653 rs148108700 |
488 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1339291726 CA393921130 |
489 | F>L | No |
ClinGen TOPMed |
|
|
rs1401913413 CA393921166 |
493 | T>I | No |
ClinGen gnomAD |
|
|
rs769638638 CA7745656 |
494 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775286573 CA7745657 |
495 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1331972958 CA393921186 |
497 | T>A | No |
ClinGen gnomAD |
|
|
rs773366161 CA7745660 |
498 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1441324712 CA393921248 |
503 | D>E | No |
ClinGen gnomAD |
|
|
rs1370512143 CA393921250 |
504 | L>V | No |
ClinGen TOPMed |
|
|
CA7745682 rs759847373 |
506 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs375437326 CA7745681 |
506 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA393921272 rs1350942537 |
507 | H>R | No |
ClinGen gnomAD |
|
|
rs908557347 CA275179208 |
507 | H>Y | No |
ClinGen Ensembl |
|
|
CA7745684 rs117361551 |
510 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA275179209 rs146029946 |
511 | N>K | No |
ClinGen ESP gnomAD |
|
|
CA393921301 rs1447992030 |
511 | N>T | No |
ClinGen gnomAD |
|
|
rs544203810 CA7745686 |
512 | C>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs555926912 CA7745687 |
513 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs555926912 CA7745688 |
513 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1003742625 CA275179210 |
515 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
rs139646426 CA7745689 |
515 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1596787566 CA393921330 |
516 | N>T | No |
ClinGen Ensembl |
|
|
CA393921337 rs1596787611 |
517 | S>P | No |
ClinGen Ensembl |
|
|
CA393921344 rs1458921786 |
518 | T>N | No |
ClinGen gnomAD |
|
|
rs1256080624 CA393921341 |
518 | T>P | No |
ClinGen gnomAD |
|
|
CA393921343 rs1256080624 |
518 | T>S | No |
ClinGen gnomAD |
|
|
rs1596787658 CA393921351 |
519 | F>S | No |
ClinGen Ensembl |
|
|
CA393921359 rs1199099009 |
520 | L>R | No |
ClinGen gnomAD |
|
|
rs755816346 CA7745690 |
522 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA275179211 rs890852025 |
523 | K>E | No |
ClinGen gnomAD |
|
|
rs1183848369 CA393921383 |
524 | E>* | No |
ClinGen gnomAD |
|
|
rs779674834 CA7745691 |
524 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA7745692 rs753645157 |
525 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs894095304 CA275179212 |
525 | G>C | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 527 | H>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754785876 CA7745693 |
528 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs552737688 CA275179214 |
529 | D>H | No |
ClinGen Ensembl |
|
|
rs1466460464 CA393921430 |
530 | L>F | No |
ClinGen gnomAD |
|
|
rs748100066 CA7745695 |
532 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA7745696 rs771072396 |
533 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781440405 CA7745697 |
534 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1309175467 CA393921457 |
534 | N>S | No |
ClinGen TOPMed |
|
|
rs1596787931 CA393921491 |
539 | Y>S | No |
ClinGen Ensembl |
|
|
CA275179216 rs1012677758 |
541 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA7745701 rs763367419 |
542 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1319975387 CA393921534 |
546 | S>G | No |
ClinGen gnomAD |
|
|
rs774774084 CA7745703 |
547 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA275179217 rs113897994 |
548 | S>P | No |
ClinGen Ensembl |
|
|
CA275179218 rs888177605 |
549 | V>G | No |
ClinGen TOPMed |
|
|
rs1156229049 CA393921570 |
552 | G>E | No |
ClinGen TOPMed |
|
|
CA275179219 rs528710169 |
552 | G>R | No |
ClinGen 1000Genomes |
|
|
rs1191673453 CA393921624 |
560 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs760150371 CA7745707 |
563 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA7745710 rs34715451 |
565 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA275179222 rs958890453 |
567 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs374633106 CA7745711 |
568 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
TCGA novel CA7745740 rs748497451 |
573 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen ExAC gnomAD |
|
rs779148028 CA7745739 |
573 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA275179831 rs976889246 |
573 | M>V | No |
ClinGen TOPMed |
|
| TCGA novel | 575 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 575 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200945374 CA7745742 |
581 | F>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200945374 CA393921775 |
581 | F>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA393921788 rs1288321106 |
583 | L>V | No |
ClinGen gnomAD |
|
| rs1567438858 | 586 | G>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 588 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747484221 CA7745743 |
589 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA7745744 rs376800845 |
591 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA393921853 rs1176325292 |
592 | M>I | No |
ClinGen gnomAD |
|
|
rs796545057 CA275179834 |
592 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs369552317 CA7745746 |
593 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs764957590 CA7745747 |
594 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393921878 rs1265520002 |
596 | Q>* | No |
ClinGen TOPMed |
|
|
rs1596802649 CA393921885 |
597 | C>G | No |
ClinGen Ensembl |
|
|
CA393921895 rs1162182421 |
598 | L>P | No |
ClinGen gnomAD |
|
|
CA7745748 rs775342579 |
599 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs145084958 CA393921919 |
602 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7745750 rs145084958 |
602 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM2140700 rs751460011 CA7745751 |
603 | S>N | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs761030916 CA7745752 CA393921928 |
603 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA393921931 rs1213130508 |
604 | I>V | No |
ClinGen Ensembl |
|
|
CA275179836 rs769071845 |
605 | A>E | No |
ClinGen Ensembl |
|
|
CA7745754 rs777128577 |
606 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372956093 CA393921969 |
610 | L>M | No |
ClinGen ESP ExAC gnomAD |
|
|
rs372956093 CA7745755 |
610 | L>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA393921983 rs1282459052 |
612 | V>M | No |
ClinGen gnomAD |
|
|
rs1358587519 CA393921995 |
614 | T>A | No |
ClinGen gnomAD |
|
|
CA393922005 rs1245384888 |
615 | V>A | No |
ClinGen gnomAD |
|
|
CA7745758 rs758703671 |
618 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA7745757 rs748372902 |
618 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA393922026 rs150512068 |
619 | P>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7745760 rs150512068 |
619 | P>S | Variant assessed as Somatic; 9.247e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs771308440 CA7745761 |
620 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 622 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1235197185 CA393922047 |
622 | Q>R | No |
ClinGen gnomAD |
|
|
rs758646416 CA393922071 |
624 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs758646416 CA7745775 |
624 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs972679370 CA275180121 |
624 | A>V | No |
ClinGen TOPMed |
|
|
rs751845057 CA7745777 |
625 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs751845057 CA393922076 |
625 | T>R | No |
ClinGen ExAC gnomAD |
|
|
CA7745776 rs778093431 |
625 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA393922082 rs1262363287 |
626 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA393922083 rs1262363287 |
626 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA275180122 COSM556592 rs369020412 |
628 | G>C | lung [Cosmic] | No |
ClinGen cosmic curated ESP TOPMed |
|
CA393922092 rs369020412 |
628 | G>S | No |
ClinGen ESP TOPMed |
|
|
rs1423990495 CA393922122 |
632 | G>V | No |
ClinGen gnomAD |
|
| TCGA novel | 633 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA275180123 rs897523901 |
634 | C>* | No |
ClinGen Ensembl |
|
|
CA7745780 rs746385056 |
634 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 637 | G>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM3957074 rs779737104 CA7745782 |
638 | A>T | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA7745784 rs140913713 |
639 | I>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7745783 rs781772394 |
639 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393922169 rs1338546038 |
640 | L>M | No |
ClinGen gnomAD |
|
|
CA393922180 rs1402351696 |
642 | N>D | No |
ClinGen gnomAD |
|
|
CA7745785 rs774103333 |
643 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs772964542 CA7745788 |
644 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA7745787 rs771903813 |
644 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA7745789 rs760627260 |
646 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA393922212 rs1596810506 |
646 | A>V | No |
ClinGen Ensembl |
|
|
CA7745790 rs748616921 |
647 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752739632 CA7745791 |
647 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs763065799 CA7745792 |
648 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1284639167 CA393922219 |
648 | F>V | No |
ClinGen gnomAD |
|
|
CA393922227 rs1218630114 |
649 | V>A | No |
ClinGen gnomAD |
|
|
CA393922257 rs1469155203 |
654 | V>M | No |
ClinGen TOPMed |
|
|
rs764206231 CA7745793 |
655 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs865909459 CA275180125 |
656 | P>L | No |
ClinGen Ensembl |
|
|
CA393922270 rs1196529301 |
656 | P>T | No |
ClinGen gnomAD |
|
|
rs1478450098 CA393922282 |
658 | L>F | No |
ClinGen gnomAD |
|
|
CA7745794 rs751877393 |
659 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA275180127 rs373378855 |
661 | A>S | No |
ClinGen ESP TOPMed |
|
|
rs1039333394 CA275180128 |
662 | A>T | No |
ClinGen TOPMed |
|
|
CA7745797 rs750912387 |
665 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA7745796 rs781630867 |
665 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs202174970 CA7745798 |
667 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1332074964 CA393922335 |
668 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA7745800 rs748788705 |
669 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA393922362 rs1241771468 |
673 | R>* | No |
ClinGen gnomAD |
|
|
CA275180129 rs1018453827 |
673 | R>L | No |
ClinGen TOPMed |
|
|
CA393922363 rs1018453827 |
673 | R>Q | No |
ClinGen TOPMed |
|
|
rs1296700454 CA393922385 |
677 | T>A | No |
ClinGen TOPMed |
|
|
rs747846672 CA7745803 |
678 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs771711415 CA7745804 |
678 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 678 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1323622758 CA393922419 |
682 | L>P | No |
ClinGen TOPMed |
No associated diseases with Q7L1I2
1 regional properties for Q7L1I2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | N-terminal of MaoC-like dehydratase | 15 - 137 | IPR039569 |
Functions
8 GO annotations of cellular component
| Name | Definition |
|---|---|
| acrosomal vesicle | A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome. |
| anchoring junction | A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| neuron projection | A prolongation or process extending from a nerve cell, e.g. an axon or dendrite. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| synaptic vesicle | A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane. |
| synaptic vesicle membrane | The lipid bilayer surrounding a synaptic vesicle. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| chemical synaptic transmission | The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse. |
| neurotransmitter transport | The directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell. |
17 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q17QN9 | SLC22A16 | Solute carrier family 22 member 16 | Bos taurus (Bovine) | PR |
| Q1JP63 | SVOP | Synaptic vesicle 2-related protein | Bos taurus (Bovine) | PR |
| Q9H015 | SLC22A4 | Solute carrier family 22 member 4 | Homo sapiens (Human) | PR |
| Q8N4V2 | SVOP | Synaptic vesicle 2-related protein | Homo sapiens (Human) | PR |
| A6NKX4 | SLC22A31 | Putative solute carrier family 22 member 31 | Homo sapiens (Human) | PR |
| Q496J9 | SV2C | Synaptic vesicle glycoprotein 2C | Homo sapiens (Human) | PR |
| Q9Z0E8 | Slc22a5 | Solute carrier family 22 member 5 | Mus musculus (Mouse) | PR |
| Q9Z306 | Slc22a4 | Solute carrier family 22 member 4 | Mus musculus (Mouse) | PR |
| Q9D9E0 | Slc22a17 | Solute carrier family 22 member 17 | Mus musculus (Mouse) | PR |
| Q8BFT9 | Svop | Synaptic vesicle 2-related protein | Mus musculus (Mouse) | PR |
| Q497L8 | Slc22a16 | Solute carrier family 22 member 16 | Mus musculus (Mouse) | PR |
| Q69ZS6 | Sv2c | Synaptic vesicle glycoprotein 2C | Mus musculus (Mouse) | PR |
| Q70BM6 | SLC22A8 | Organic anion transporter 3 | Sus scrofa (Pig) | PR |
| Q9Z2I7 | Svop | Synaptic vesicle 2-related protein | Rattus norvegicus (Rat) | PR |
| Q9Z2I6 | Sv2c | Synaptic vesicle glycoprotein 2C | Rattus norvegicus (Rat) | PR |
| Q9R141 | Slc22a4 | Solute carrier family 22 member 4 | Rattus norvegicus (Rat) | PR |
| Q7Z118 | B0361.11 | Putative transporter B0361.11 | Caenorhabditis elegans | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDDYKYQDNY | GGYAPSDGYY | RGNESNPEED | AQSDVTEGHD | EEDEIYEGEY | QGIPHPDDVK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| AKQAKMAPSR | MDSLRGQTDL | MAERLEDEEQ | LAHQYETIMD | ECGHGRFQWI | LFFVLGLALM |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ADGVEVFVVS | FALPSAEKDM | CLSSSKKGML | GMIVYLGMMA | GAFILGGLAD | KLGRKRVLSM |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SLAVNASFAS | LSSFVQGYGA | FLFCRLISGI | GIGGALPIVF | AYFSEFLSRE | KRGEHLSWLG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| IFWMTGGLYA | SAMAWSIIPH | YGWGFSMGTN | YHFHSWRVFV | IVCALPCTVS | MVALKFMPES |
| 310 | 320 | 330 | 340 | 350 | 360 |
| PRFLLEMGKH | DEAWMILKQV | HDTNMRAKGT | PEKVFTVSNI | KTPKQMDEFI | EIQSSTGTWY |
| 370 | 380 | 390 | 400 | 410 | 420 |
| QRWLVRFKTI | FKQVWDNALY | CVMGPYRMNT | LILAVVWFAM | AFSYYGLTVW | FPDMIRYFQD |
| 430 | 440 | 450 | 460 | 470 | 480 |
| EEYKSKMKVF | FGEHVYGATI | NFTMENQIHQ | HGKLVNDKFT | RMYFKHVLFE | DTFFDECYFE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| DVTSTDTYFK | NCTIESTIFY | NTDLYEHKFI | NCRFINSTFL | EQKEGCHMDL | EQDNDFLIYL |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VSFLGSLSVL | PGNIISALLM | DRIGRLKMIG | GSMLISAVCC | FFLFFGNSES | AMIGWQCLFC |
| 610 | 620 | 630 | 640 | 650 | 660 |
| GTSIAAWNAL | DVITVELYPT | NQRATAFGIL | NGLCKFGAIL | GNTIFASFVG | ITKVVPILLA |
| 670 | 680 | ||||
| AASLVGGGLI | ALRLPETREQ | VLM |