Q496J9
Gene name |
SV2C (KIAA1054) |
Protein name |
Synaptic vesicle glycoprotein 2C |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:22987 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
7 structures for Q496J9
603 variants for Q496J9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| TCGA novel | 2 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3310723 rs201283160 |
3 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs879207125 CA121197703 |
3 | D>G | No |
ClinGen Ensembl |
|
|
rs1055013779 CA121197699 |
3 | D>N | No |
ClinGen Ensembl |
|
|
CA3310724 rs369773755 |
4 | S>C | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1419725445 CA360317631 |
6 | K>Q | No |
ClinGen TOPMed |
|
|
rs896752754 CA121197707 |
6 | K>R | No |
ClinGen Ensembl |
|
|
CA360317706 rs1404107305 |
12 | M>V | No |
ClinGen gnomAD |
|
|
rs990769531 CA121197717 |
13 | K>Q | No |
ClinGen TOPMed |
|
|
rs762793374 CA3310727 |
13 | K>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA360317737 rs751250938 |
15 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs751250938 CA3310729 |
15 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs767074287 CA360317754 |
17 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767074287 CA3310731 |
17 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs143998842 CA3310732 |
18 | I>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3310733 rs143998842 |
18 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1279875404 CA360317762 |
19 | A>T | No |
ClinGen gnomAD |
|
|
rs780229412 CA3310734 |
20 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA121197764 rs202024052 COSM1544113 |
21 | E>D | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes |
|
rs1227669714 CA360317774 |
21 | E>K | No |
ClinGen gnomAD |
|
|
rs1322979777 CA360317784 |
22 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1003999046 CA121197765 |
22 | V>M | No |
ClinGen gnomAD |
|
|
rs1284820817 CA360317808 |
25 | Q>H | No |
ClinGen gnomAD |
|
|
rs1217756500 CA360317812 |
26 | T>A | No |
ClinGen TOPMed |
|
| TCGA novel | 28 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3310737 rs370939122 |
28 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA121197776 rs962481499 |
28 | K>R | No |
ClinGen TOPMed |
|
|
rs771997327 CA3310739 |
30 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3310741 rs745734916 |
35 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA3310742 rs377133919 |
36 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370857452 CA3310743 |
36 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs762703343 CA3310744 |
37 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs762703343 CA360317880 |
37 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs763923894 CA3310745 |
37 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 38 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761553818 CA3310747 |
39 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200148632 CA121197809 |
39 | D>N | No |
ClinGen TOPMed |
|
|
CA121197811 rs200148632 |
39 | D>Y | No |
ClinGen TOPMed |
|
|
rs766866638 CA3310748 |
40 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA360317906 rs1381293155 |
41 | Y>S | No |
ClinGen gnomAD |
|
|
CA3310749 rs749966669 |
42 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1468570086 CA360317913 |
42 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1307911829 CA360317919 |
43 | Q>L | No |
ClinGen gnomAD |
|
|
rs755641466 CA3310750 |
44 | R>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 46 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3310751 rs766991977 |
47 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1276109362 CA360317948 |
47 | S>I | No |
ClinGen gnomAD |
|
|
CA3310753 rs542427646 |
48 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs754439110 CA3310752 COSM1070175 |
48 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA360317955 rs1336599961 |
49 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1463050910 CA360317967 |
50 | Q>H | No |
ClinGen gnomAD |
|
|
CA3310754 rs779444270 |
50 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA3310756 rs748341143 |
55 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA360318028 rs1160491095 |
58 | Y>C | No |
ClinGen gnomAD |
|
|
rs1440443401 CA360318025 |
58 | Y>H | No |
ClinGen gnomAD |
|
|
CA3310757 rs758651691 |
60 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs758651691 CA360318043 |
60 | P>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA360318046 rs1176534251 |
61 | A>P | No |
ClinGen gnomAD |
|
|
rs558495648 CA3310760 |
64 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1580292609 CA360318089 |
67 | G>D | No |
ClinGen Ensembl |
|
| TCGA novel | 67 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3310762 rs749242644 |
68 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3310763 rs768398181 |
70 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA360318117 CA3310766 rs559499864 |
71 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs761310792 CA3310765 |
71 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs772811760 CA3310767 |
72 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3310769 rs766038627 |
73 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA360318136 rs200962672 |
74 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA121197946 rs200962672 |
74 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA360318135 rs200962672 |
74 | G>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 75 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760151944 CA3310771 |
75 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA360318158 rs1477831931 |
78 | A>T | No |
ClinGen gnomAD |
|
|
CA3310772 rs538101845 |
81 | G>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs778023865 CA3310775 |
82 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs370288816 CA3310776 |
82 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs757275538 CA3310777 |
83 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA360318209 rs1321016022 |
85 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 87 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3310779 rs190071386 |
89 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3310778 rs781278758 |
89 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs768591047 CA3310780 |
90 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA360318241 rs1276291362 COSM225209 |
90 | E>K | NS [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1257937571 CA360318251 |
91 | G>E | No |
ClinGen gnomAD |
|
|
CA3310785 rs760268981 |
93 | Y>C | No |
ClinGen ExAC |
|
|
rs770526798 CA3310786 |
94 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA360318280 rs1199810418 |
95 | G>A | No |
ClinGen gnomAD |
|
|
CA360318277 rs776285291 |
95 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA360318278 rs1199810418 |
95 | G>D | No |
ClinGen gnomAD |
|
|
rs776285291 CA3310787 |
95 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368758509 CA3310788 |
97 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs368758509 CA360318291 |
97 | P>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1476687795 CA360318299 |
98 | S>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 98 | S>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1580292810 CA360318305 |
99 | M>R | No |
ClinGen Ensembl |
|
|
CA360318320 rs1205862296 |
101 | Q>E | No |
ClinGen TOPMed |
|
|
rs146415005 CA360318330 |
102 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA360318326 rs1424169694 |
102 | A>T | No |
ClinGen gnomAD |
|
|
rs146415005 CA3310790 |
102 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs763042833 CA3310793 |
104 | D>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA360318346 rs1405496873 |
105 | S>C | No |
ClinGen gnomAD |
|
|
CA3310794 rs78725110 |
106 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs78725110 CA360318357 |
106 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs564825385 CA360318360 |
107 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3310796 rs564825385 |
107 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764397749 CA3310799 |
114 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764397749 CA3310798 |
114 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746593541 CA3310804 |
115 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3310801 COSM323672 rs149119749 |
115 | D>H | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA3310802 rs149119749 |
115 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA121198081 rs149119749 |
115 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA360318415 rs1347409889 |
116 | E>K | No |
ClinGen TOPMed |
|
|
CA360318428 rs1294170876 |
117 | Y>F | No |
ClinGen gnomAD |
|
|
rs776492250 COSM1329448 CA3310805 |
119 | D>Y | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs769475653 CA360318447 |
120 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769475653 CA3310807 |
120 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759085527 CA3310806 COSM483053 |
120 | R>W | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs764450772 CA3310810 |
121 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3310809 rs562854902 |
121 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1580292984 CA360318456 |
122 | E>G | No |
ClinGen Ensembl |
|
|
CA360318465 rs1176131171 |
124 | E>Q | No |
ClinGen gnomAD |
|
|
rs769828491 CA3310813 |
124 | E>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 127 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA360318495 rs1298506677 |
128 | R>K | No |
ClinGen gnomAD |
|
|
COSM1288276 rs756166288 CA360318511 |
130 | D>E | autonomic_ganglia [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA121198109 rs1012156005 |
130 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs367890274 CA3310816 |
131 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3310817 rs752641294 |
132 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA360318522 rs1554034966 |
132 | E>A | No |
ClinGen Ensembl |
|
|
CA360318520 rs752641294 |
132 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758274182 CA3310818 |
134 | L>S | No |
ClinGen ExAC |
|
|
rs777567202 CA3310819 |
135 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3310820 rs746787856 |
137 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA360318565 rs1239687942 |
138 | Y>C | No |
ClinGen gnomAD |
|
|
rs1383100594 CA360318608 |
144 | E>A | No |
ClinGen TOPMed |
|
|
rs745535885 CA3310824 |
145 | C>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3310822 rs753875820 |
145 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371722323 CA3310826 |
146 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs371722323 CA3310825 COSM1070177 |
146 | G>S | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1165480823 CA360318623 |
147 | H>D | No |
ClinGen TOPMed |
|
|
rs769027251 CA3310827 |
149 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3310828 rs200407202 |
149 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA360318654 rs966616481 |
151 | Q>H | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 152 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA121198167 rs754508238 |
152 | W>R | No |
ClinGen TOPMed |
|
|
CA3310829 rs762138131 |
152 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA3310830 rs767922332 |
153 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA3310831 rs773376991 |
154 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs760921491 CA3310832 |
155 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs528331991 COSM1438610 CA3310834 |
157 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs528331991 CA360318688 |
157 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1307437819 COSM347318 CA360318710 |
160 | M>I | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA360318704 rs1339349159 |
160 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs751596173 CA3310837 |
161 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs959742036 CA121198191 |
163 | M>I | No |
ClinGen TOPMed |
|
|
CA3310838 rs757067429 |
163 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA360318727 rs1307930062 |
163 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA360318725 rs757067429 |
163 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs781162705 CA3310839 |
164 | A>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 164 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745444157 CA3310840 |
165 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs779809294 CA3310842 |
166 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3310843 rs143178564 |
167 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1580293278 CA360318766 |
169 | V>G | No |
ClinGen Ensembl |
|
|
rs1561229932 CA360318763 |
169 | V>L | No |
ClinGen Ensembl |
|
|
CA360318771 rs1236331828 |
170 | F>S | No |
ClinGen gnomAD |
|
|
rs1580293283 CA360318769 |
170 | F>V | No |
ClinGen Ensembl |
|
|
CA360318777 rs1305514180 |
171 | V>I | No |
ClinGen TOPMed |
|
|
CA3310845 rs774819373 |
172 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3310846 rs774819373 |
172 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA360318800 rs373545330 |
175 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3310849 rs373545330 COSM1438611 |
175 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA360318818 rs1271199442 |
178 | S>C | No |
ClinGen gnomAD |
|
|
rs199759329 CA3310850 |
178 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1173936476 CA360318824 |
179 | A>T | No |
ClinGen TOPMed |
|
|
CA360318831 rs1479999793 |
180 | E>K | No |
ClinGen TOPMed |
|
|
CA360318854 rs1179151680 |
183 | L>F | No |
ClinGen gnomAD |
|
|
rs1038301155 CA121198227 |
185 | I>T | No |
ClinGen Ensembl |
|
|
CA360318876 rs1201547566 |
186 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA3310854 rs751501785 |
189 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA3310853 rs765379715 |
189 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 190 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA360318909 rs1375697963 |
192 | W>G | No |
ClinGen TOPMed gnomAD |
|
|
CA360318908 rs1375697963 |
192 | W>R | No |
ClinGen TOPMed gnomAD |
|
|
CA121198241 rs922112268 |
193 | L>Q | No |
ClinGen Ensembl |
|
|
rs1474146254 CA360317262 |
194 | G>A | No |
ClinGen gnomAD |
|
| TCGA novel | 194 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA360317268 rs1406572356 |
195 | S>T | No |
ClinGen gnomAD |
|
|
CA3311011 rs764461927 |
196 | I>L | No |
ClinGen ExAC |
|
|
rs561216746 CA3311012 |
196 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3311013 rs376092207 |
197 | V>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3311014 rs767529386 |
198 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs368961998 CA3311015 |
199 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3311016 rs756287728 |
200 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1224240412 CA360317305 |
201 | M>I | No |
ClinGen gnomAD |
|
|
rs1240801745 CA360317312 |
202 | M>T | No |
ClinGen gnomAD |
|
| TCGA novel | 203 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA360317317 rs1357090246 |
203 | V>M | No |
ClinGen TOPMed |
|
|
rs200809106 CA3311017 |
205 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM252854 CA3311018 rs752729244 |
205 | A>V | ovary large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA360317338 rs1580345631 |
206 | F>C | No |
ClinGen Ensembl |
|
|
rs1246361483 CA360317352 |
208 | W>* | No |
ClinGen TOPMed |
|
|
CA360317360 rs1384910093 |
209 | G>E | No |
ClinGen TOPMed |
|
|
CA121270869 rs867831187 |
209 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA360317369 rs544888404 |
211 | L>M | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1426247371 CA360317374 |
212 | A>T | No |
ClinGen gnomAD |
|
|
CA360317389 rs1156685814 |
214 | K>E | No |
ClinGen gnomAD |
|
|
rs1561259064 CA360317397 |
215 | V>L | No |
ClinGen Ensembl |
|
|
rs751192851 CA3311023 |
220 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs756955373 CA3311024 |
220 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs1290610267 CA360317437 |
221 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1290610267 CA360317436 |
221 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA360317443 rs1446780782 |
222 | L>Q | No |
ClinGen TOPMed |
|
|
COSM1070179 CA3311026 rs373154009 |
225 | M>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA360317462 rs1451317626 |
225 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3311025 rs780963041 |
225 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA360317463 rs1451317626 |
225 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA360317470 rs1221768317 |
226 | S>P | No |
ClinGen gnomAD |
|
|
rs780371830 CA360317488 CA3311028 |
229 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC TOPMed gnomAD NCI-TCGA |
|
rs202144317 CA360317499 COSM129511 CA3311029 |
230 | F>L | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA360317513 rs1561259150 |
232 | A>V | No |
ClinGen Ensembl |
|
|
COSM483054 rs1268389470 CA360317521 |
233 | F>L | kidney [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA360317522 rs1270604954 |
234 | L>F | No |
ClinGen gnomAD |
|
|
CA3311030 rs199642813 |
237 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3311031 rs774708883 |
238 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA360317557 rs1473891021 |
239 | Q>L | No |
ClinGen gnomAD |
|
|
rs1473891021 CA360317556 |
239 | Q>R | No |
ClinGen gnomAD |
|
|
CA360317577 rs1028310476 |
242 | G>D | No |
ClinGen TOPMed |
|
|
rs1028310476 CA121270932 |
242 | G>V | No |
ClinGen TOPMed |
|
|
CA3311035 rs773527691 |
245 | L>F | No |
ClinGen ExAC |
|
|
CA360317595 rs773527691 |
245 | L>V | No |
ClinGen ExAC |
|
|
rs1281763735 CA360317601 |
246 | F>L | No |
ClinGen gnomAD |
|
|
CA3311037 rs766503936 |
247 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3311038 rs200529235 |
248 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200529235 CA360317634 |
248 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs965720468 CA121270970 |
253 | F>I | No |
ClinGen TOPMed |
|
|
CA360317705 rs1468777352 |
254 | G>R | No |
ClinGen gnomAD |
|
|
rs761648379 CA3311059 |
255 | I>F | No |
ClinGen ExAC |
|
|
rs761648379 CA3311060 |
255 | I>L | No |
ClinGen ExAC |
|
|
rs755802436 CA3311062 |
255 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311061 rs749975877 |
255 | I>S | No |
ClinGen ExAC TOPMed |
|
|
rs749975877 CA121280883 |
255 | I>T | No |
ClinGen ExAC TOPMed |
|
|
rs1183864738 CA360316912 |
257 | G>V | No |
ClinGen TOPMed |
|
|
rs754523861 CA3311065 |
259 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs61746767 CA3311064 |
259 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779370809 CA3311066 |
260 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA360316938 rs1308285259 |
262 | V>E | No |
ClinGen gnomAD |
|
| TCGA novel | 262 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM593425 rs748677235 CA3311068 |
264 | S>* | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3311067 rs748677235 |
264 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1208222312 CA360316957 |
265 | Y>C | No |
ClinGen TOPMed |
|
|
CA3311069 rs778208037 |
266 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA360316973 rs1270306934 |
267 | A>V | No |
ClinGen TOPMed |
|
|
rs751358005 CA3311071 |
272 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs13153247 CA360317000 |
272 | R>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs13153247 CA360316999 |
272 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311073 COSM3697312 rs13153247 |
272 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3311072 rs751358005 |
272 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1297623079 CA360317001 |
273 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA360317002 rs1297623079 |
273 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs13153253 CA121280963 |
274 | K>N | No |
ClinGen Ensembl |
|
|
CA3311075 rs774387223 |
275 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139844012 CA3311074 |
275 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA3311077 rs767158602 |
276 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs761814967 CA3311076 |
276 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs13153261 CA3311078 |
277 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311079 rs760456755 |
280 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1161009851 CA360317058 |
281 | W>* | No |
ClinGen TOPMed |
|
|
CA360317064 rs766025327 |
282 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs766025327 CA3311080 |
282 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA3311081 CA360317080 rs753539447 |
284 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA360317078 rs1230851537 |
284 | M>T | No |
ClinGen gnomAD |
|
|
rs918350813 CA121281066 |
286 | W>C | No |
ClinGen Ensembl |
|
|
CA360317130 rs1222965588 |
291 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs753140281 CA3311084 |
293 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1242161988 CA360317151 |
294 | S>F | No |
ClinGen gnomAD |
|
|
CA121281112 rs370314313 |
296 | M>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA3311086 rs778203718 |
296 | M>T | No |
ClinGen ExAC |
|
|
CA360317158 rs370314313 |
296 | M>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1181320005 CA360317167 |
297 | A>S | No |
ClinGen gnomAD |
|
|
rs1181320005 CA360317165 |
297 | A>T | No |
ClinGen gnomAD |
|
|
rs890014680 CA360317177 |
298 | W>* | No |
ClinGen gnomAD |
|
|
rs890014680 CA121281117 |
298 | W>C | No |
ClinGen gnomAD |
|
|
CA3311088 rs757609434 |
300 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3311089 COSM1070183 rs200015480 |
302 | P>L | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs200015480 CA360317201 |
302 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA360317198 rs1399429728 |
302 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs377280885 CA360317217 |
304 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3311092 rs368243303 |
305 | G>R | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
CA360155512 rs750615952 |
307 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1005890179 CA120986398 |
308 | F>Y | No |
ClinGen Ensembl |
|
|
CA360155526 rs1436362416 |
309 | S>R | No |
ClinGen gnomAD |
|
|
rs1181562034 CA360155534 |
310 | M>I | No |
ClinGen gnomAD |
|
|
CA360155539 rs1473856957 |
311 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA3311108 rs756391317 |
311 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA3311109 rs780487852 |
312 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1414612983 CA360155565 |
315 | Q>R | No |
ClinGen Ensembl |
|
|
CA120986429 rs1050237357 |
317 | H>P | No |
ClinGen TOPMed |
|
|
CA3311113 rs777718396 |
318 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs375056697 CA3311111 |
318 | S>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1394622051 CA360155601 |
320 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3311114 rs770649936 |
320 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs762537711 CA3311116 |
321 | V>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776428022 CA3311115 |
321 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA3311117 rs769435074 |
322 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1234781653 CA360155631 |
325 | V>A | No |
ClinGen gnomAD |
|
|
rs762472964 CA3311119 |
325 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752033928 CA3311121 |
326 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA360155645 rs1458733969 |
327 | A>V | No |
ClinGen TOPMed |
|
|
rs768196365 CA3311123 |
330 | C>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 331 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs149463986 CA3311125 |
332 | S>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs372510291 CA3311129 |
334 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs372510291 CA3311128 |
334 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1169515832 CA360155686 |
335 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
COSM357015 CA3311131 rs770846000 |
337 | L>F | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs375882560 CA3311133 |
340 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 341 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs769597563 CA3311134 |
345 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs775165202 CA3311135 |
345 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs775165202 CA3311136 COSM1438615 |
345 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3311137 rs768150226 |
346 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs761958250 CA120986568 |
347 | L>S | No |
ClinGen Ensembl |
|
|
CA360155799 rs1264401030 |
350 | V>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 352 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 352 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA360155831 rs1183266906 |
355 | E>K | No |
ClinGen gnomAD |
|
|
CA120986824 rs371645359 |
356 | A>S | No |
ClinGen Ensembl |
|
|
rs779723580 CA3311153 |
357 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs750633270 CA120986850 |
358 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA3311154 rs749164523 |
361 | K>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 362 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1321959078 CA360155930 |
367 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA360155927 rs1561298868 |
367 | N>Y | No |
ClinGen Ensembl |
|
|
rs1457768989 CA360155937 |
368 | M>L | No |
ClinGen TOPMed |
|
|
rs921877540 CA120986860 |
370 | A>S | No |
ClinGen TOPMed |
|
|
CA360155976 rs1403316761 |
370 | A>V | No |
ClinGen gnomAD |
|
|
rs747638061 CA3311157 |
371 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3311156 rs774090995 |
371 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374223649 CA3311159 |
372 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3311161 rs561451250 |
374 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3311160 rs561451250 |
374 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA120986888 rs537624992 |
376 | K>N | No |
ClinGen Ensembl |
|
|
rs776849848 CA3311162 |
377 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA120986904 rs547865662 |
378 | F>L | No |
ClinGen Ensembl |
|
|
rs765348729 CA3311164 COSM3393667 |
379 | T>M | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs370282974 CA3311180 |
380 | V>I | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 381 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1435200955 CA360156141 |
381 | N>K | No |
ClinGen TOPMed |
|
|
rs375669090 CA120989157 |
383 | I>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 385 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA120989163 rs1033375697 |
389 | I>M | No |
ClinGen Ensembl |
|
|
CA3311183 rs770223470 |
389 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1580032497 CA360156261 |
391 | E>D | No |
ClinGen Ensembl |
|
|
CA3311187 rs201424578 |
393 | I>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA360156313 rs1176585141 |
396 | E>G | No |
ClinGen TOPMed |
|
|
CA3311188 rs751633523 |
397 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761992941 CA3311189 |
400 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1183484116 CA360156382 |
402 | W>L | No |
ClinGen TOPMed |
|
|
CA360156376 rs1580032593 |
402 | W>R | No |
ClinGen Ensembl |
|
|
rs753834108 CA3311191 |
403 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311190 rs372006804 |
403 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs778858401 CA3311194 |
405 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311195 rs752339893 |
408 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA3311197 rs368752277 |
409 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs758111862 CA3311196 |
409 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs746474527 CA3311198 |
410 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3311199 rs770526223 |
411 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs190593094 COSM1496175 CA3311200 |
411 | R>H | kidney [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs190593094 COSM1544111 CA3311201 |
411 | R>L | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs200154327 CA3311203 |
413 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs372122654 CA3311206 |
416 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA120989500 rs916337625 |
418 | W>C | No |
ClinGen TOPMed |
|
|
CA3311224 rs780578869 |
418 | W>L | No |
ClinGen ExAC gnomAD |
|
|
CA3311223 rs780578869 |
418 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA3311226 rs769028669 |
421 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311227 rs747579198 |
422 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 425 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs949014228 CA120989507 |
429 | V>I | No |
ClinGen Ensembl |
|
|
rs748408876 CA3311228 |
430 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA360156832 rs1227782632 |
434 | I>T | No |
ClinGen gnomAD |
|
|
CA360156829 rs1348438904 |
434 | I>V | No |
ClinGen gnomAD |
|
|
rs949161963 CA120989541 |
437 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1046694843 CA120989542 |
438 | I>T | No |
ClinGen TOPMed |
|
|
CA360156870 rs1201341219 |
440 | W>L | No |
ClinGen gnomAD |
|
|
rs773329405 CA3311230 |
440 | W>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 441 | F>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1396206721 CA360156905 |
445 | F>L | No |
ClinGen TOPMed |
|
|
rs938342611 CA120991459 |
448 | Y>C | No |
ClinGen Ensembl |
|
|
CA360156972 rs918400845 |
449 | G>E | No |
ClinGen TOPMed |
|
|
CA120991470 rs918400845 |
449 | G>V | No |
ClinGen TOPMed |
|
|
rs1352239915 CA360156991 |
451 | S>Y | No |
ClinGen gnomAD |
|
|
rs750063338 CA3311256 |
452 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs755581046 CA3311257 |
453 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755581046 CA120991478 |
453 | W>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1561303070 CA360157032 |
455 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs756018103 CA3311258 |
456 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA360157058 rs1340400675 |
457 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs754286272 CA3311259 |
457 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1407794486 CA360157071 |
458 | I>M | No |
ClinGen TOPMed |
|
|
rs548280850 CA3311260 |
460 | P>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs779357025 CA3311261 |
461 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA360157110 rs1329260386 |
462 | Q>H | No |
ClinGen TOPMed |
|
|
rs1223819176 CA360157114 |
463 | S>P | No |
ClinGen gnomAD |
|
|
rs758741930 CA3311263 |
464 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311264 rs373338361 |
465 | E>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1168984218 CA360157155 |
466 | Y>C | No |
ClinGen gnomAD |
|
|
rs771070597 CA3311266 |
466 | Y>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 467 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1292887300 CA360157183 |
469 | L>P | No |
ClinGen gnomAD |
|
|
rs746007793 CA3311268 |
473 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA360157238 rs1157522418 |
474 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 474 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1472534124 CA360157265 |
476 | D>E | No |
ClinGen TOPMed |
|
|
rs558722782 CA3311270 |
476 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA360157301 rs1228772060 |
479 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA360157338 rs2270927 |
482 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA360157340 rs2270927 |
482 | T>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3311272 rs2270927 VAR_050303 |
482 | T>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA3311273 rs772784777 |
483 | I>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 486 | T>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA360157395 rs1488813460 |
487 | M>I | No |
ClinGen gnomAD |
|
|
CA120991531 rs1052630480 |
487 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs999520698 CA120991526 |
487 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA360157402 rs1266295996 |
488 | E>K | No |
ClinGen TOPMed |
|
|
rs760332861 CA3311274 |
489 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA360157411 rs760332861 |
489 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1246331697 CA360157442 |
491 | I>M | No |
ClinGen gnomAD |
|
|
rs1189508530 CA360157456 |
493 | T>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1391731744 CA360157461 |
493 | T>S | No |
ClinGen gnomAD |
|
|
rs759089810 CA3311277 |
495 | M>I | No |
ClinGen ExAC TOPMed |
|
|
rs548001146 CA3311276 |
495 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs753169887 CA3311279 |
497 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA3311278 rs570723672 |
497 | Y>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs893831427 CA360157510 |
498 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs893831427 CA120991572 |
498 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1435341166 CA360157527 |
499 | N>S | No |
ClinGen gnomAD |
|
|
rs1322166268 CA360157538 |
500 | G>C | No |
ClinGen gnomAD |
|
|
CA3311281 rs778008741 |
500 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311298 rs753185097 |
501 | R>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs763386697 CA3311299 |
503 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311300 rs201019699 |
503 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 504 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1256351664 CA360157616 |
504 | G>R | No |
ClinGen gnomAD |
|
|
CA360157626 rs1580046475 |
505 | V>D | No |
ClinGen Ensembl |
|
|
rs778645466 CA3311303 |
505 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311305 rs750704072 |
508 | K>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756150629 CA3311306 |
510 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311308 rs749442800 |
511 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA360157669 rs1304590120 |
512 | F>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA360157684 rs1360069562 |
514 | D>H | No |
ClinGen gnomAD |
|
|
CA360157695 rs1365176808 |
515 | S>F | No |
ClinGen gnomAD |
|
| TCGA novel | 517 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758265621 CA3311309 |
517 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1350398856 CA360157715 |
518 | K>N | No |
ClinGen gnomAD |
|
|
rs1306653629 CA360157709 |
518 | K>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA3311310 rs777727933 |
519 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1365644123 CA360157744 |
523 | E>K | No |
ClinGen gnomAD |
|
|
rs368083897 CA3311311 |
524 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
| TCGA novel | 525 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1302288043 CA360157769 |
526 | T>N | No |
ClinGen gnomAD |
|
|
CA120993132 rs780522175 |
529 | N>D | No |
ClinGen Ensembl |
|
|
CA3311314 rs745516093 |
530 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs769292915 CA3311316 |
531 | Y>C | No |
ClinGen ExAC |
|
|
CA360157802 rs1447558892 |
532 | F>L | No |
ClinGen TOPMed |
|
|
CA3311318 rs762560611 |
536 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA360157853 rs1244420351 |
538 | I>M | No |
ClinGen gnomAD |
|
|
CA3311320 rs775017016 |
540 | T>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 540 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA360157868 rs1396520105 |
541 | V>I | No |
ClinGen gnomAD |
|
|
rs767996350 CA3311322 |
543 | D>G | No |
ClinGen ExAC gnomAD |
|
|
VAR_050304 CA3311321 rs31244 |
543 | D>N | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 544 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762421455 CA3311339 |
547 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA360157974 rs1282268102 |
548 | E>K | No |
ClinGen gnomAD |
|
|
rs1355550018 CA360157989 |
549 | P>Q | No |
ClinGen gnomAD |
|
|
CA3311340 rs768196341 |
550 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA360158032 rs1326487559 |
553 | I>F | No |
ClinGen gnomAD |
|
|
CA3311341 rs373236256 |
554 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA360158115 rs1474844061 |
560 | C>* | No |
ClinGen TOPMed |
|
|
rs1168168980 CA360158112 |
560 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA120994694 rs766489181 |
561 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3828436 CA3311343 rs766489181 |
561 | S>L | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3311342 rs761142493 |
561 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs369286225 CA3311346 |
564 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA |
|
rs188730765 CA3311349 CA3311348 |
565 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs765307481 CA3311347 |
565 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA360158153 rs1420059706 |
566 | K>M | No |
ClinGen gnomAD |
|
|
rs1165035597 CA360158155 CA360158154 |
566 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs781226822 CA3311350 |
567 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs551054716 CA3311353 |
574 | D>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1580049083 CA360158208 |
574 | D>G | No |
ClinGen Ensembl |
|
|
rs1580049075 CA360158205 |
574 | D>H | No |
ClinGen Ensembl |
|
|
CA360158231 rs1339709923 |
577 | Y>C | No |
ClinGen gnomAD |
|
|
CA360158237 rs1375330284 |
578 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA3311355 rs748973204 |
578 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA360158241 rs768222996 |
578 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1348020453 CA360158245 |
579 | A>D | No |
ClinGen gnomAD |
|
|
rs1348020453 CA360158247 |
579 | A>V | No |
ClinGen gnomAD |
|
|
rs375494365 CA3311357 |
580 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA360158256 rs1325217576 |
581 | W>R | No |
ClinGen TOPMed |
|
|
CA3311358 rs747727420 |
583 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA360158290 rs1396430005 |
585 | V>A | No |
ClinGen TOPMed |
|
|
CA360158288 rs1441530047 |
585 | V>F | No |
ClinGen TOPMed |
|
|
CA360158304 rs1376199957 |
587 | F>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 590 | T>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1419734326 CA360158323 |
590 | T>R | No |
ClinGen TOPMed |
|
|
rs1393937109 CA360158368 |
597 | N>I | No |
ClinGen TOPMed |
|
|
CA3311362 rs771360261 |
598 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs759770783 CA3311364 |
603 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1455909126 CA360158401 |
603 | L>V | No |
ClinGen TOPMed |
|
|
CA3311365 rs753219889 |
604 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA3311366 rs201110335 |
607 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1171062171 CA360158429 |
607 | I>V | No |
ClinGen gnomAD |
|
|
rs756743267 CA3311368 |
609 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs767305649 CA3311369 |
609 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311371 rs756614285 |
610 | L>* | No |
ClinGen ExAC gnomAD |
|
|
rs755796390 CA3311373 |
610 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA360158463 rs1273882390 |
612 | M>I | No |
ClinGen gnomAD |
|
|
CA3311375 rs779909443 |
612 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA360158471 rs1344681449 |
614 | G>S | No |
ClinGen gnomAD |
|
|
rs772962809 CA3311390 |
615 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311391 rs760646227 |
616 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753654506 CA3311393 |
617 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs754870042 CA3311394 |
620 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs1170985439 CA360158547 |
624 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
CA360158546 rs1170985439 |
624 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs757781502 CA3311397 |
628 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746562147 CA3311399 |
630 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA360158595 rs1162094885 |
631 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA120995375 rs1015511360 |
632 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA120995383 rs35035322 |
634 | S>C | No |
ClinGen Ensembl |
|
| TCGA novel | 634 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3311400 rs757781864 |
635 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA3311401 rs781697227 |
636 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3311402 rs746177790 |
637 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA3311403 rs770171715 |
638 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1309779511 CA360158651 |
639 | M>T | No |
ClinGen gnomAD |
|
|
rs775620710 CA3311404 |
640 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA120995415 rs372083701 |
641 | C>* | No |
ClinGen 1000Genomes ESP TOPMed gnomAD |
|
|
rs35723561 CA120995408 |
641 | C>G | No |
ClinGen Ensembl |
|
|
rs1580049888 CA360158669 |
642 | L>P | No |
ClinGen Ensembl |
|
|
rs200769447 CA3311406 |
644 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1186881624 CA360158700 |
647 | T>A | No |
ClinGen gnomAD |
|
|
CA3311409 rs766318136 |
648 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1197116899 CA360158726 |
651 | W>* | No |
ClinGen gnomAD |
|
|
CA360158735 rs1257867324 |
652 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3311414 rs758058059 |
656 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs376683111 CA360158765 |
657 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376683111 CA3311415 |
657 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376683111 CA3311416 |
657 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA360158774 rs1580049995 |
658 | T>I | No |
ClinGen Ensembl |
|
|
CA360158792 rs1364590650 |
661 | L>P | No |
ClinGen gnomAD |
|
|
rs369974472 CA3311417 |
663 | P>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs372341328 CA3311418 |
664 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA360158807 rs1235195413 |
664 | T>P | No |
ClinGen gnomAD |
|
|
CA3311421 rs202233851 |
666 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756409524 CA3311420 |
666 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA360159773 rs1231773251 |
668 | A>V | No |
ClinGen gnomAD |
|
|
CA360159777 rs1281699312 |
669 | T>A | No |
ClinGen TOPMed |
|
|
rs1480673953 CA360159808 |
672 | G>D | No |
ClinGen gnomAD |
|
|
CA360159819 rs1178513581 |
673 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
rs762720469 CA3311432 |
674 | L>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 676 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs554653198 CA3311433 |
676 | A>V | Variant assessed as Somatic; 9.277e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3311435 rs761349390 |
678 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA3311436 rs767038870 |
678 | C>W | No |
ClinGen ExAC gnomAD |
|
|
rs749987470 CA3311437 |
680 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA3311439 rs780605841 |
682 | A>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 682 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3311443 rs779123910 |
683 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779123910 CA3311442 |
683 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3311444 rs772227535 |
684 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 685 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3311447 rs769847038 |
691 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs775343906 CA3311448 |
694 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs775343906 CA3311449 |
694 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA3311452 rs761435934 |
698 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA121013924 rs944188986 |
699 | I>V | No |
ClinGen TOPMed |
|
|
rs1157781082 CA360160098 |
701 | I>M | No |
ClinGen TOPMed |
|
|
CA3311455 COSM1620552 rs760236844 |
703 | L>M | liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
| TCGA novel | 704 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3311457 rs754305533 |
706 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 706 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761091930 CA121013969 |
709 | V>A | No |
ClinGen Ensembl |
|
|
CA3311460 rs572553728 |
709 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 710 | C>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779166705 CA3311461 |
711 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA360160192 rs1348263784 |
713 | L>I | No |
ClinGen gnomAD |
|
|
CA360160194 rs1440387338 |
713 | L>P | No |
ClinGen gnomAD |
|
|
CA360160201 rs1432614415 |
714 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs766432727 CA3311463 |
714 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766432727 CA3311464 |
714 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757422554 CA3311466 |
717 | C>* | No |
ClinGen ExAC |
|
|
CA360160253 rs1277156875 |
720 | D>E | No |
ClinGen gnomAD |
|
|
CA360160264 rs1291698537 |
721 | T>I | No |
ClinGen TOPMed |
|
| TCGA novel | 722 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs574806183 CA3311467 |
722 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1356189939 CA360160272 |
723 | T>S | No |
ClinGen TOPMed |
|
|
rs1287066592 CA360160283 |
724 | Q>* | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 724 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1343331706 CA360160293 |
725 | V>I | No |
ClinGen TOPMed |
|
|
CA360160314 rs1317438438 |
727 | M>T | No |
ClinGen TOPMed |
No associated diseases with Q496J9
Functions
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| anchoring junction | A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| integral component of synaptic vesicle membrane | The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| neuron projection | A prolongation or process extending from a nerve cell, e.g. an axon or dendrite. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| synaptic vesicle | A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane. |
| synaptic vesicle membrane | The lipid bilayer surrounding a synaptic vesicle. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| chemical synaptic transmission | The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse. |
| neurotransmitter transport | The directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell. |
17 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q17QN9 | SLC22A16 | Solute carrier family 22 member 16 | Bos taurus (Bovine) | PR |
| Q1JP63 | SVOP | Synaptic vesicle 2-related protein | Bos taurus (Bovine) | PR |
| Q9H015 | SLC22A4 | Solute carrier family 22 member 4 | Homo sapiens (Human) | PR |
| Q8N4V2 | SVOP | Synaptic vesicle 2-related protein | Homo sapiens (Human) | PR |
| A6NKX4 | SLC22A31 | Putative solute carrier family 22 member 31 | Homo sapiens (Human) | PR |
| Q7L1I2 | SV2B | Synaptic vesicle glycoprotein 2B | Homo sapiens (Human) | PR |
| Q9Z0E8 | Slc22a5 | Solute carrier family 22 member 5 | Mus musculus (Mouse) | PR |
| Q9Z306 | Slc22a4 | Solute carrier family 22 member 4 | Mus musculus (Mouse) | PR |
| Q9D9E0 | Slc22a17 | Solute carrier family 22 member 17 | Mus musculus (Mouse) | PR |
| Q8BFT9 | Svop | Synaptic vesicle 2-related protein | Mus musculus (Mouse) | PR |
| Q497L8 | Slc22a16 | Solute carrier family 22 member 16 | Mus musculus (Mouse) | PR |
| Q69ZS6 | Sv2c | Synaptic vesicle glycoprotein 2C | Mus musculus (Mouse) | PR |
| Q70BM6 | SLC22A8 | Organic anion transporter 3 | Sus scrofa (Pig) | PR |
| Q9Z2I7 | Svop | Synaptic vesicle 2-related protein | Rattus norvegicus (Rat) | PR |
| Q9R141 | Slc22a4 | Solute carrier family 22 member 4 | Rattus norvegicus (Rat) | PR |
| Q9Z2I6 | Sv2c | Synaptic vesicle glycoprotein 2C | Rattus norvegicus (Rat) | PR |
| Q7Z118 | B0361.11 | Putative transporter B0361.11 | Caenorhabditis elegans | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEDSYKDRTS | LMKGAKDIAR | EVKKQTVKKV | NQAVDRAQDE | YTQRSYSRFQ | DEEDDDDYYP |
| 70 | 80 | 90 | 100 | 110 | 120 |
| AGETYNGEAN | DDEGSSEATE | GHDEDDEIYE | GEYQGIPSMN | QAKDSIVSVG | QPKGDEYKDR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| RELESERRAD | EEELAQQYEL | IIQECGHGRF | QWALFFVLGM | ALMADGVEVF | VVGFVLPSAE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TDLCIPNSGS | GWLGSIVYLG | MMVGAFFWGG | LADKVGRKQS | LLICMSVNGF | FAFLSSFVQG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| YGFFLFCRLL | SGFGIGGAIP | TVFSYFAEVL | AREKRGEHLS | WLCMFWMIGG | IYASAMAWAI |
| 310 | 320 | 330 | 340 | 350 | 360 |
| IPHYGWSFSM | GSAYQFHSWR | VFVIVCALPC | VSSVVALTFM | PESPRFLLEV | GKHDEAWMIL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| KLIHDTNMRA | RGQPEKVFTV | NKIKTPKQID | ELIEIESDTG | TWYRRCFVRI | RTELYGIWLT |
| 430 | 440 | 450 | 460 | 470 | 480 |
| FMRCFNYPVR | DNTIKLTIVW | FTLSFGYYGL | SVWFPDVIKP | LQSDEYALLT | RNVERDKYAN |
| 490 | 500 | 510 | 520 | 530 | 540 |
| FTINFTMENQ | IHTGMEYDNG | RFIGVKFKSV | TFKDSVFKSC | TFEDVTSVNT | YFKNCTFIDT |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VFDNTDFEPY | KFIDSEFKNC | SFFHNKTGCQ | ITFDDDYSAY | WIYFVNFLGT | LAVLPGNIVS |
| 610 | 620 | 630 | 640 | 650 | 660 |
| ALLMDRIGRL | TMLGGSMVLS | GISCFFLWFG | TSESMMIGML | CLYNGLTISA | WNSLDVVTVE |
| 670 | 680 | 690 | 700 | 710 | 720 |
| LYPTDRRATG | FGFLNALCKA | AAVLGNLIFG | SLVSITKSIP | ILLASTVLVC | GGLVGLCLPD |
| TRTQVLM |