O49660
Gene name |
DTX56 |
Protein name |
Protein DETOXIFICATION 56 |
Names |
AtDTX56, Multidrug and toxic compound extrusion protein 56, MATE protein 56, Protein RESISTANT TO HIGH CARBON DIOXIDE 1 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT4G22790 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for O49660
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-O49660-F1 | Predicted | AlphaFoldDB |
36 variants for O49660
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_4_11976600_A_G | 10 | L>S | No | 1000Genomes | |
| tmp_4_11976304_G_A | 109 | H>Y | No | 1000Genomes | |
| ENSVATH00531801 | 138 | T>I | No | 1000Genomes | |
| ENSVATH02910843 | 145 | D>E | No | 1000Genomes | |
| tmp_4_11976177_T_C | 151 | K>R | No | 1000Genomes | |
| ENSVATH14282587 | 156 | Y>F | No | 1000Genomes | |
| ENSVATH02910841 | 166 | F>L | No | 1000Genomes | |
| tmp_4_11976105_C_G | 175 | S>T | No | 1000Genomes | |
| ENSVATH00531799 | 225 | L>I | No | 1000Genomes | |
| ENSVATH00531798 | 232 | V>A | No | 1000Genomes | |
| tmp_4_11975899_C_G | 244 | G>R | No | 1000Genomes | |
| ENSVATH00531797 | 247 | N>D | No | 1000Genomes | |
| ENSVATH02910837 | 249 | S>C | No | 1000Genomes | |
| tmp_4_11975803_T_A | 276 | I>F | No | 1000Genomes | |
| ENSVATH12156373 | 287 | P>Q | No | 1000Genomes | |
| ENSVATH06755292 | 306 | A>S | No | 1000Genomes | |
| tmp_4_11975650_T_C | 327 | N>D | No | 1000Genomes | |
| ENSVATH06755291 | 329 | K>T | No | 1000Genomes | |
| tmp_4_11975617_T_C | 338 | T>A | No | 1000Genomes | |
| tmp_4_11975610_A_G | 340 | I>T | No | 1000Genomes | |
| ENSVATH02910834 | 340 | I>V | No | 1000Genomes | |
| ENSVATH02910832 | 343 | I>V | No | 1000Genomes | |
| ENSVATH12156371 | 351 | L>F | No | 1000Genomes | |
| ENSVATH00531792 | 370 | L>I | No | 1000Genomes | |
| tmp_4_11975482_C_G | 383 | A>P | No | 1000Genomes | |
| ENSVATH00531791 | 393 | M>V | No | 1000Genomes | |
| ENSVATH14282586 | 406 | S>Y | No | 1000Genomes | |
| ENSVATH12156366 | 426 | T>I | No | 1000Genomes | |
| tmp_4_11975347_C_T | 428 | A>T | No | 1000Genomes | |
| tmp_4_11975310_A_G | 440 | I>T | No | 1000Genomes | |
| ENSVATH06755285 | 448 | L>F | No | 1000Genomes | |
| ENSVATH12156365 | 450 | L>F | No | 1000Genomes | |
| ENSVATH12156304 | 453 | L>S | No | 1000Genomes | |
| ENSVATH02910825 | 478 | D>E | No | 1000Genomes | |
| tmp_4_11975166_T_C | 488 | D>G | No | 1000Genomes | |
| ENSVATH12156303 | 490 | H>D | No | 1000Genomes |
No associated diseases with O49660
8 regional properties for O49660
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | Leucine-rich repeat | 150 - 171 | IPR001611-1 |
| repeat | Leucine-rich repeat | 194 - 215 | IPR001611-2 |
| repeat | Leucine-rich repeat | 216 - 237 | IPR001611-3 |
| repeat | Leucine-rich repeat | 238 - 259 | IPR001611-4 |
| repeat | Leucine-rich repeat | 260 - 280 | IPR001611-5 |
| repeat | Leucine-rich repeat | 281 - 302 | IPR001611-6 |
| domain | Guanylate kinase-like domain | 414 - 597 | IPR008144 |
| domain | Guanylate kinase/L-type calcium channel beta subunit | 414 - 600 | IPR008145 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). |
| transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
| xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic from one side of a membrane to the other. A xenobiotic is a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cellular response to carbon dioxide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus. |
| regulation of stomatal opening | Any process that modulates the frequency, rate or extent of stomatal opening. |
| xenobiotic detoxification by transmembrane export across the plasma membrane | A process that reduces or removes the toxicity of a xenobiotic by exporting it outside the cell. |
12 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q05497 | YDR338C | Uncharacterized transporter YDR338C | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q9SYD6 | DTX42 | Protein DETOXIFICATION 42 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| F4HPH1 | DTX22 | Protein DETOXIFICATION 22 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| F4HQ05 | DTX8 | Protein DETOXIFICATION 8 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| F4I4Q3 | DTX32 | Protein DETOXIFICATION 32 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C994 | DTX14 | Protein DETOXIFICATION 14 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FHB6 | DTX16 | Protein DETOXIFICATION 16 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FKQ1 | DTX27 | Protein DETOXIFICATION 27 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FNC1 | DTX28 | Protein DETOXIFICATION 28 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LPV4 | DTX31 | Protein DETOXIFICATION 31 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SIA5 | DTX1 | Protein DETOXIFICATION 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8W488 | DTX21 | Protein DETOXIFICATION 21 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSETSKSESL | DPEVSEGLCS | KTLMQSIVHE | LKLQMRIGLP | LVVMNLLWFG | KMTTTSVFLG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RQGELNLAGG | SLGFSFANVT | GFSVLYGISA | AMEPICGQAF | GAKNFKLLHK | TLFMAVLLLL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LISVPISFLW | LNVHKILTGF | GQREDISFIA | KKYLLYLLPE | LPILSFLCPL | KAYLSSQGVT |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LPIMFTTAAA | TSLHIPINIV | LSKARGIEGV | AMAVWITDFI | VVILLTGYVI | VVERMKENKW |
| 250 | 260 | 270 | 280 | 290 | 300 |
| KQGGWLNQSA | QDWLTLIKLS | GPCCLTVCLE | WWCYEILVLL | TGRLPNPVQA | VSILIIVFNF |
| 310 | 320 | 330 | 340 | 350 | 360 |
| DYLLYAVMLS | LGTCVATRVS | NELGANNPKG | AYRAAYTTLI | VGIISGCIGA | LVMIAFRGFW |
| 370 | 380 | 390 | 400 | 410 | 420 |
| GSLYTHHDQL | ILNGVKKMML | IMAVIEVVNF | PLMVCGEIVR | GTAKPSLGMY | ANLSGFYLLA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LPLGATLAFK | AKQGLQGFLI | GLFVGISLCL | SILLIFIARI | DWEKEAGKAQ | ILTCNTEDEQ |
| 490 | |||||
| TSQGSGQDSH | S |