Q9SDQ4
Gene name |
GLR3.7 (GLR5, At2g32400, T32F6.8) |
Protein name |
Glutamate receptor 3.7 |
Names |
Ionotropic glutamate receptor GLR5, Ligand-gated ion channel 3.7 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT2G32400 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9SDQ4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9SDQ4-F1 | Predicted | AlphaFoldDB |
39 variants for Q9SDQ4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_2_13756214_G_A | 7 | P>L | No | 1000Genomes | |
| ENSVATH13506027 | 9 | V>I | No | 1000Genomes | |
| tmp_2_13756197_C_A | 13 | A>S | No | 1000Genomes | |
| ENSVATH13506026 | 15 | I>T | No | 1000Genomes | |
| ENSVATH13506025 | 28 | P>T | No | 1000Genomes | |
| ENSVATH00256900 | 32 | N>K | No | 1000Genomes | |
| ENSVATH05643625 | 32 | N>T | No | 1000Genomes | |
| ENSVATH05643623 | 78 | A>S | No | 1000Genomes | |
| ENSVATH01938871 | 141 | L>I | No | 1000Genomes | |
| tmp_2_13755373_G_A | 171 | S>L | No | 1000Genomes | |
| ENSVATH14578218 | 203 | H>R | No | 1000Genomes | |
| ENSVATH14578217 | 266 | S>G | No | 1000Genomes | |
| tmp_2_13755023_C_T | 288 | V>I | No | 1000Genomes | |
| tmp_2_13755002_G_A | 295 | H>Y | No | 1000Genomes | |
| ENSVATH14578216 | 303 | M>R | No | 1000Genomes | |
| ENSVATH14578215 | 323 | E>K | No | 1000Genomes | |
| ENSVATH13506009 | 331 | I>V | No | 1000Genomes | |
| ENSVATH01938870 | 338 | K>N | No | 1000Genomes | |
| ENSVATH05643617 | 343 | R>Q | No | 1000Genomes | |
| ENSVATH05643616 | 354 | F>I | No | 1000Genomes | |
| ENSVATH05643615 | 354 | F>Y | No | 1000Genomes | |
| ENSVATH05643614 | 382 | G>D | No | 1000Genomes | |
| tmp_2_13754737_C_T | 383 | R>Q | No | 1000Genomes | |
| ENSVATH00256897 | 385 | V>I | No | 1000Genomes | |
| ENSVATH05643613 | 386 | I>V | No | 1000Genomes | |
| tmp_2_13754653_C_T | 411 | G>D | No | 1000Genomes | |
| ENSVATH01938866 | 420 | R>H | No | 1000Genomes | |
| ENSVATH13506007 | 471 | E>D | No | 1000Genomes | |
| tmp_2_13754347_T_G | 513 | H>P | No | 1000Genomes | |
| tmp_2_13754137_G_T | 542 | S>R | No | 1000Genomes | |
| ENSVATH05643610 | 569 | A>S | No | 1000Genomes | |
| ENSVATH14578211 | 605 | E>K | No | 1000Genomes | |
| ENSVATH05643603 | 727 | P>Q | No | 1000Genomes | |
| ENSVATH01938860 | 837 | A>G | No | 1000Genomes | |
| ENSVATH13505998 | 851 | R>W | No | 1000Genomes | |
| ENSVATH00256892 | 858 | T>I | No | 1000Genomes | |
| ENSVATH05643599 | 898 | R>K | No | 1000Genomes | |
| ENSVATH05643598 | 898 | R>S | No | 1000Genomes | |
| tmp_2_13752715_G_A | 906 | P>S | No | 1000Genomes |
No associated diseases with Q9SDQ4
5 regional properties for Q9SDQ4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Ionotropic glutamate receptor, C-terminal | 460 - 802 | IPR001320-1 |
| domain | Ionotropic glutamate receptor, C-terminal | 801 - 832 | IPR001320-2 |
| domain | Solute-binding protein family 3/N-terminal domain of MltF | 517 - 800 | IPR001638 |
| domain | Receptor, ligand binding region | 49 - 397 | IPR001828 |
| domain | Plant glutamate receptor, periplasmic ligand-binding domain | 32 - 416 | IPR044440 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| plasmodesma | A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium channel activity | Enables the facilitated diffusion of a calcium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. |
| glutamate receptor activity | Combining with glutamate and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. |
| ligand-gated ion channel activity | Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts. |
| signaling receptor activity | Receiving a signal and transmitting it in the cell to initiate a change in cell activity. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| calcium ion transport | The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| calcium-mediated signaling | Any intracellular signal transduction in which the signal is passed on within the cell via calcium ions. |
| cellular response to amino acid stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups. |
14 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| O60391 | GRIN3B | Glutamate receptor ionotropic, NMDA 3B | Homo sapiens (Human) | PR |
| Q12879 | GRIN2A | Glutamate receptor ionotropic, NMDA 2A | Homo sapiens (Human) | PR |
| Q91ZU9 | Grin3b | Glutamate receptor ionotropic, NMDA 3B | Mus musculus (Mouse) | PR |
| P23819 | Gria2 | Glutamate receptor 2 | Mus musculus (Mouse) | PR |
| P35439 | Grin1 | Glutamate receptor ionotropic, NMDA 1 | Rattus norvegicus (Rat) | PR |
| P19491 | Gria2 | Glutamate receptor 2 | Rattus norvegicus (Rat) | PR |
| Q8VHN2 | Grin3b | Glutamate receptor ionotropic, NMDA 3B | Rattus norvegicus (Rat) | PR |
| O04660 | GLR2.1 | Glutamate receptor 2.1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O81078 | GLR2.9 | Glutamate receptor 2.9 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O81776 | GLR2.4 | Glutamate receptor 2.4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q84W41 | GLR3.6 | Glutamate receptor 3.6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C8E7 | GLR3.3 | Glutamate receptor 3.3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SHV1 | GLR2.2 | Glutamate receptor 2.2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SHV2 | GLR2.3 | Glutamate receptor 2.3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGLGIDPSVA | ITALIVVILV | VPMDCQRPQL | VNIGAVFAFD | SVIGRAAKVA | LEAAVSDVNN |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DKSFLKETEL | RLLMEDSACN | VFRGSFGAFE | LLEKEVVAMI | GPISSSVAHT | ISDIAKGLHF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PLVSFAATDP | TLSALQFPFF | LRTTPNDAHQ | MSALVDLINF | YGWKEVISVY | SDDELGRNGV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SALDDELYKK | RSRISYKVPL | SVHSDEKFLT | NALNKSKSIG | PRVYILHFGP | DPLLRIFDIA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| QKLQMMTHEY | VWLATDWLSV | TLDSLSDKGT | LKRLEGVVGL | RQHIPESVKM | EHFTHKLQSN |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RSMNAYALHA | YDTVWMIAHG | IEELLNEGIN | ITFSYSEKLL | HARGTKLHLE | KIKFFNSGEL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| LLEKLLKVNF | TGIAGQVQFG | SGRNVIGCDY | EIINVNKTDV | HTVGFWSKNG | GFSVVAPKTR |
| 430 | 440 | 450 | 460 | 470 | 480 |
| HSQKKTSFVS | DEKLGDITWP | GGGREKPRGW | VIADSADPLK | IVVPRRVSFV | EFVTEEKNSS |
| 490 | 500 | 510 | 520 | 530 | 540 |
| HRIQGFCIDV | FIEALKFVPY | SVPYIFEPFG | NGHSSPNYNH | LIQMVTDGVY | DAAVGDIAIV |
| 550 | 560 | 570 | 580 | 590 | 600 |
| PSRSKLVDFS | QPYASTGLVV | VIPANDDNAT | WIFLRPFTSR | LWCVVLVSFL | VIAVVIWILE |
| 610 | 620 | 630 | 640 | 650 | 660 |
| HRINEDFRGP | PRRQLSTMLL | FSFSTLFKRN | QEDTISNLAR | LVMIVWLFLL | MVLTASYTAN |
| 670 | 680 | 690 | 700 | 710 | 720 |
| LTSILTVQQL | PSAITGIDSL | RASEVPIGYQ | AGTFTLEYLT | YSLGMARSRL | VPLDSTEEYE |
| 730 | 740 | 750 | 760 | 770 | 780 |
| KALKLGPTNW | GGVAAIVDEL | PYIELFLAER | TGFKIVGEPF | MHRGWGFAFK | RDSPLAIDMS |
| 790 | 800 | 810 | 820 | 830 | 840 |
| TAILKLSETR | KLQEIRKKWL | CKTNCAGKSN | WNPEPNQLHL | KSFKGLYLVC | IAITVSAFLV |
| 850 | 860 | 870 | 880 | 890 | 900 |
| FVLRMIRQFV | RYRRMERTSS | MPRASWSASP | TLRLRELVFD | FVEFVDEKEE | AIKRMFRRSD |
| 910 | 920 | ||||
| DSNNNPSHVG | EVQADTEVPR | N |