O60391
Gene name |
GRIN3B |
Protein name |
Glutamate receptor ionotropic, NMDA 3B |
Names |
GluN3B, N-methyl-D-aspartate receptor subtype 3B, NMDAR3B, NR3B |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:116444 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for O60391
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-O60391-F1 | Predicted | AlphaFoldDB |
1256 variants for O60391
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV001262994 CA9030554 rs765385702 |
604 | T>M | Variant assessed as Somatic; 0.0 impact. Neurodevelopmental disorder [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001262649 rs747179788 CA303980742 |
705 | Y>C | Neurodevelopmental disorder [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA9030068 rs572944531 |
2 | E>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402952517 rs1306295647 |
2 | E>A | No |
ClinGen TOPMed |
|
|
CA303978977 rs953457496 |
3 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1027718987 CA303978974 |
3 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1205578923 CA402952568 |
5 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1272523563 CA402952590 |
6 | A>E | No |
ClinGen gnomAD |
|
|
CA402952581 rs1231331570 |
6 | A>T | No |
ClinGen gnomAD |
|
|
CA9030070 rs764232329 |
8 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA402952613 rs1599453666 |
8 | W>G | No |
ClinGen Ensembl |
|
|
rs1555736304 CA402952642 |
10 | G>V | No |
ClinGen Ensembl |
|
|
rs558871680 CA303978990 |
11 | L>R | No |
ClinGen 1000Genomes TOPMed |
|
|
rs757164134 CA9030073 |
12 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs544534250 CA303978996 |
14 | A>E | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs544534250 CA303978998 |
14 | A>G | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs577245079 CA303978994 |
14 | A>S | No |
ClinGen 1000Genomes |
|
|
CA402952685 rs544534250 |
14 | A>V | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA402952731 rs1280878747 |
17 | P>L | No |
ClinGen TOPMed |
|
|
rs925903057 CA303979003 |
19 | S>A | No |
ClinGen Ensembl |
|
|
rs1271137463 CA402952781 |
20 | A>E | No |
ClinGen TOPMed |
|
|
CA402952778 rs1339374584 |
20 | A>T | No |
ClinGen TOPMed |
|
|
CA402952788 rs1164802309 |
21 | G>R | No |
ClinGen gnomAD |
|
|
CA402952802 rs1599453738 |
22 | G>D | No |
ClinGen Ensembl |
|
|
rs1310721133 CA402952798 |
22 | G>S | No |
ClinGen TOPMed |
|
|
rs1419254903 CA402952855 |
26 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs914963662 CA303979008 |
27 | C>S | No |
ClinGen TOPMed |
|
|
CA402952904 rs1177674118 |
30 | L>V | No |
ClinGen TOPMed |
|
|
rs1478692501 CA402952923 |
31 | A>E | No |
ClinGen TOPMed |
|
|
rs947814832 CA303979010 |
31 | A>P | No |
ClinGen TOPMed |
|
|
rs947814832 CA402952920 |
31 | A>T | No |
ClinGen TOPMed |
|
|
rs542744852 CA9030076 |
32 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402952964 rs1599453756 |
34 | G>R | No |
ClinGen Ensembl |
|
|
rs1217769910 CA402952993 |
35 | G>R | No |
ClinGen Ensembl |
|
|
CA402953026 rs1406151368 |
37 | V>M | No |
ClinGen gnomAD |
|
|
CA402953068 rs1465148405 |
39 | L>P | No |
ClinGen gnomAD |
|
|
rs928117882 CA303979014 |
41 | A>S | No |
ClinGen TOPMed |
|
|
rs928117882 CA303979017 |
41 | A>T | No |
ClinGen TOPMed |
|
|
CA402953147 rs1300978198 |
42 | L>P | No |
ClinGen gnomAD |
|
|
rs1375483270 CA402953153 |
43 | L>V | No |
ClinGen gnomAD |
|
|
CA303979025 rs1037006531 |
44 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA303979029 rs994812003 |
46 | A>T | No |
ClinGen TOPMed |
|
|
CA402953295 rs1331993554 |
49 | A>V | No |
ClinGen TOPMed |
|
|
rs1467156302 CA402953301 |
50 | R>C | No |
ClinGen TOPMed |
|
|
CA402953298 rs1467156302 |
50 | R>G | No |
ClinGen TOPMed |
|
|
CA402953305 rs1415369032 |
50 | R>H | No |
ClinGen TOPMed |
|
|
rs1225580508 CA402953313 |
51 | A>T | No |
ClinGen gnomAD |
|
|
CA303979036 rs1008054623 |
52 | R>G | No |
ClinGen TOPMed |
|
|
CA303979044 rs998053758 |
55 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA402953470 rs1467568222 |
58 | A>V | No |
ClinGen TOPMed |
|
|
CA9030078 rs748958926 |
59 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1342119232 CA402953486 |
59 | R>Q | No |
ClinGen gnomAD |
|
|
CA402953508 rs1253560253 |
60 | A>S | No |
ClinGen gnomAD |
|
|
CA402953515 rs1412745334 |
60 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA402953582 rs1314459124 |
65 | R>G | No |
ClinGen TOPMed |
|
|
rs956634776 CA303979050 |
67 | P>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 67 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402953620 rs1349370453 |
67 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA402953667 rs1250055034 |
69 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA402953673 rs1458236738 |
70 | L>V | No |
ClinGen TOPMed |
|
|
CA402953715 rs1481655327 |
71 | S>I | No |
ClinGen gnomAD |
|
|
CA402953726 rs1201102695 |
71 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA402953771 rs1429599450 |
73 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1418765545 CA402953795 |
74 | L>Q | No |
ClinGen TOPMed |
|
|
CA303979052 rs989071947 |
75 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA402953826 rs1484875372 |
76 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA9030080 rs144440136 |
77 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030081 rs747492431 |
77 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1180329473 CA402953902 |
79 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA303979057 rs980919866 |
79 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA402953925 rs1307417585 |
80 | P>H | No |
ClinGen gnomAD |
|
|
CA402953949 rs1406597301 |
81 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA402954002 rs1284131626 |
83 | D>V | No |
ClinGen gnomAD |
|
|
CA402954073 rs1217502389 |
85 | A>G | No |
ClinGen gnomAD |
|
|
CA402954057 rs1367213590 |
85 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs939495536 CA303979061 |
87 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA402954103 rs939495536 |
87 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA303979064 rs1036547423 |
89 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1036547423 CA402954148 |
89 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1160467529 CA402954157 |
89 | R>H | No |
ClinGen TOPMed |
|
|
rs1490933136 CA402954197 |
90 | G>V | No |
ClinGen gnomAD |
|
|
CA402954218 rs1246878086 |
91 | L>P | No |
ClinGen gnomAD |
|
|
CA9030083 rs139242998 |
94 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs577371675 CA303979069 |
96 | V>G | No |
ClinGen Ensembl |
|
|
CA402954331 rs1421023282 |
97 | P>T | No |
ClinGen gnomAD |
|
|
CA402954342 rs1485303144 |
98 | P>S | No |
ClinGen TOPMed |
|
|
rs1218108007 CA402954365 |
100 | V>M | No |
ClinGen TOPMed |
|
|
rs1388292866 CA402954423 |
105 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 107 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1313945035 CA402954795 |
110 | R>G | No |
ClinGen TOPMed |
|
|
CA402954796 rs1313945035 |
110 | R>W | No |
ClinGen TOPMed |
|
| TCGA novel | 112 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402954815 rs1341304749 |
112 | E>K | No |
ClinGen TOPMed |
|
|
rs1334636660 CA402954829 |
113 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1290911539 CA402954844 |
114 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1287708843 CA402954852 |
115 | Q>* | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 115 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402954860 rs1362722135 |
116 | L>M | No |
ClinGen gnomAD |
|
|
rs1173291574 CA402954863 |
116 | L>Q | No |
ClinGen TOPMed |
|
|
CA9030088 rs764099116 |
117 | H>L | No |
ClinGen ExAC TOPMed |
|
|
rs12986002 CA9030087 |
117 | H>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402954898 rs1362248341 |
119 | L>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA402954904 rs1247100082 |
119 | L>P | No |
ClinGen gnomAD |
|
|
CA402954915 rs1218913213 |
120 | A>E | No |
ClinGen gnomAD |
|
|
CA402954908 rs1320362884 |
120 | A>T | No |
ClinGen gnomAD |
|
|
CA402954919 rs1218913213 |
120 | A>V | No |
ClinGen gnomAD |
|
|
CA402954927 rs1187425794 |
121 | A>E | No |
ClinGen gnomAD |
|
|
CA402954921 rs1464931753 |
121 | A>T | No |
ClinGen gnomAD |
|
|
CA402954931 rs1187425794 |
121 | A>V | No |
ClinGen gnomAD |
|
|
CA402954935 rs1446387926 |
122 | A>T | No |
ClinGen gnomAD |
|
|
CA402954943 rs1163560414 |
122 | A>V | No |
ClinGen gnomAD |
|
|
CA402954950 rs1403443796 |
123 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1161509301 CA402954954 |
123 | T>S | No |
ClinGen gnomAD |
|
|
rs1385528512 CA402954971 |
124 | E>D | No |
ClinGen gnomAD |
|
|
CA402954963 rs1318635619 |
124 | E>G | No |
ClinGen gnomAD |
|
|
CA9030090 rs761687154 |
124 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1484515796 CA402954982 |
125 | T>I | No |
ClinGen TOPMed |
|
|
rs1484515796 CA402954980 |
125 | T>N | No |
ClinGen TOPMed |
|
|
CA402954977 rs1453982183 |
125 | T>S | No |
ClinGen gnomAD |
|
|
rs1377404781 CA402954997 |
126 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1377404781 CA402954995 |
126 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1285868871 CA402955002 |
127 | V>L | No |
ClinGen gnomAD |
|
|
CA402955013 rs1207491111 |
128 | L>I | No |
ClinGen gnomAD |
|
|
CA402955019 rs1265704818 |
128 | L>P | No |
ClinGen gnomAD |
|
|
CA402955025 rs1188134746 |
129 | S>G | No |
ClinGen gnomAD |
|
|
CA402955029 rs1236874726 |
129 | S>N | No |
ClinGen gnomAD |
|
|
CA402955032 rs756032796 |
129 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402955039 rs1178748001 |
130 | L>M | No |
ClinGen gnomAD |
|
|
CA402955066 rs1157300381 |
132 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA303979084 rs1030800158 |
132 | R>W | No |
ClinGen TOPMed |
|
|
CA303979087 rs886877480 |
134 | E>G | No |
ClinGen TOPMed |
|
|
CA402955103 rs1394907131 |
135 | A>G | No |
ClinGen TOPMed |
|
|
rs1466644090 CA402955119 |
137 | A>S | No |
ClinGen TOPMed |
|
|
CA9030095 rs766207454 |
137 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA303979092 rs1016565759 |
139 | L>P | No |
ClinGen Ensembl |
|
|
rs1334049042 CA402955199 |
142 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA402955194 rs1334049042 |
142 | P>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 142 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1170343894 CA402956821 |
144 | P>A | No |
ClinGen TOPMed |
|
|
CA402956830 rs1309242222 |
144 | P>Q | No |
ClinGen gnomAD |
|
|
rs1408425319 CA402956910 |
146 | H>L | No |
ClinGen TOPMed gnomAD |
|
|
CA402956915 rs768887801 |
147 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768887801 CA9030106 |
147 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402956945 rs867202767 CA303979524 |
148 | Q>H | No |
ClinGen gnomAD |
|
|
rs1233264030 CA402956959 |
149 | L>M | No |
ClinGen gnomAD |
|
|
CA402956964 rs1273736106 |
149 | L>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA402956969 rs1273736106 |
149 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs999321071 CA303979525 |
150 | H>P | No |
ClinGen Ensembl |
|
|
rs1195471545 CA402957026 |
151 | W>* | No |
ClinGen TOPMed |
|
|
rs1216242580 CA402957039 |
151 | W>* | No |
ClinGen gnomAD |
|
|
rs762034807 CA9030108 |
152 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs533032722 CA9030111 |
153 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs766108668 CA9030113 |
154 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs766108668 CA9030114 |
154 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA9030112 rs113181909 |
154 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs759216342 CA9030115 |
155 | L>M | No |
ClinGen ExAC |
|
|
CA402957163 rs1476467297 |
156 | E>G | No |
ClinGen gnomAD |
|
|
CA402957150 rs1375998377 |
156 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA402957185 rs2240154 |
157 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9030117 VAR_019676 rs2240154 |
157 | T>M | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA402957188 rs2240154 |
157 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA303979526 rs748195921 |
158 | L>P | No |
ClinGen Ensembl |
|
|
rs202186487 CA9030119 |
159 | L>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030122 rs138359117 |
164 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs908076154 CA303979527 |
168 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA9030127 rs779253822 |
169 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1225831254 CA402957505 |
169 | H>Y | No |
ClinGen gnomAD |
|
|
rs1209457193 CA402957538 |
170 | A>G | No |
ClinGen gnomAD |
|
|
rs772290501 CA9030128 |
170 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1209457193 CA402957542 |
170 | A>V | No |
ClinGen gnomAD |
|
|
CA402957569 rs903119058 |
171 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
rs903119058 CA303979529 |
171 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1448767001 CA402957561 |
171 | W>S | No |
ClinGen gnomAD |
|
|
CA9030129 rs773375530 |
172 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs35592366 CA9030131 |
173 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1369396143 CA402957660 |
174 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA9030134 rs759432466 |
175 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs373257218 CA303979530 |
175 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030133 rs373257218 |
175 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1050412160 CA303979531 |
177 | A>S | No |
ClinGen gnomAD |
|
|
CA402957834 rs1314842130 |
179 | C>Y | No |
ClinGen gnomAD |
|
|
VAR_079909 CA9030138 rs201484790 |
180 | R>C | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA9030139 rs751030090 |
180 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs540094501 CA9030140 |
181 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030141 rs780664333 |
182 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs754291109 CA9030142 |
184 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs575985258 CA9030144 |
185 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030146 rs772376172 |
186 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1157843410 CA402958056 |
189 | A>D | No |
ClinGen TOPMed |
|
|
CA402958092 rs1159534421 |
191 | W>R | No |
ClinGen TOPMed gnomAD |
|
|
CA402958152 rs1387263365 |
193 | S>C | No |
ClinGen gnomAD |
|
|
CA9030149 rs770901800 |
194 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030148 rs199717057 VAR_079910 |
194 | R>W | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1310313769 CA402958218 |
196 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1395175750 CA402958214 |
196 | G>S | No |
ClinGen gnomAD |
|
|
CA9030151 rs149087926 |
197 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs369365676 COSM4131125 CA9030150 |
197 | R>W | thyroid [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA402958239 rs1327126425 |
198 | P>S | No |
ClinGen gnomAD |
|
|
rs1257051991 CA402958266 |
199 | P>L | No |
ClinGen gnomAD |
|
|
rs1483216964 CA402958329 |
201 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs775217866 CA9030153 |
203 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA9030154 rs762625764 |
204 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA402958413 rs1410824974 |
204 | D>E | No |
ClinGen gnomAD |
|
|
CA9030159 rs766935811 |
207 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030158 rs375724549 |
207 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370031535 CA9030161 |
208 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030162 rs765725337 |
208 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370031535 CA9030160 |
208 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030163 rs753149069 |
210 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402958586 rs1220962392 |
212 | D>G | No |
ClinGen gnomAD |
|
|
CA402958613 rs1302079558 |
213 | A>V | No |
ClinGen gnomAD |
|
|
CA303979533 rs1030440495 |
214 | G>A | No |
ClinGen Ensembl |
|
|
CA9030166 rs747229196 |
215 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA402958663 rs186778870 |
216 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9030169 rs199819972 |
216 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030168 rs186778870 |
216 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs775375702 CA9030171 |
218 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749130329 CA9030172 |
218 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs775375702 CA303979534 |
218 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1174448915 CA402958769 |
220 | A>D | No |
ClinGen TOPMed |
|
|
rs774061149 CA9030174 |
221 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402958802 rs1568389706 |
222 | M>V | No |
ClinGen Ensembl |
|
|
CA9030177 rs368329479 |
223 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368703396 CA303979535 |
224 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030179 rs368703396 |
224 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1366972751 CA402958907 |
226 | V>L | No |
ClinGen gnomAD |
|
|
CA9030183 rs764485174 |
227 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758898930 CA9030182 CA402958928 |
227 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758898930 CA402958924 |
227 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402958950 rs1272925343 |
228 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA402958941 rs1228035514 |
228 | G>S | No |
ClinGen gnomAD |
|
| rs1182407511 | 228 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402959022 rs1323936348 |
231 | P>A | No |
ClinGen gnomAD |
|
|
CA9030184 rs751818106 |
231 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402959025 rs1323936348 |
231 | P>S | No |
ClinGen gnomAD |
|
|
rs1487850093 CA402959073 |
233 | P>L | No |
ClinGen gnomAD |
|
|
rs374598541 CA402959081 |
234 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030186 rs374598541 |
234 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs745975247 CA9030187 |
234 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA303979537 rs887502129 |
235 | A>T | No |
ClinGen TOPMed |
|
|
rs780028640 CA9030189 |
235 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1211821985 CA402959116 |
237 | L>I | No |
ClinGen TOPMed |
|
|
CA402959123 rs1456418199 |
238 | L>H | No |
ClinGen gnomAD |
|
|
CA402959126 rs1366103266 |
239 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs778624033 CA9030192 |
240 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772894807 CA9030195 |
243 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA9030194 rs771659930 |
243 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA9030196 rs760156588 |
244 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030197 rs367698479 |
244 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM4140198 rs776143887 CA9030198 |
246 | R>C | ovary [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA9030199 rs55646937 |
246 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402959170 rs55646937 |
246 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs55646937 CA9030200 |
246 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
VAR_079911 rs370645758 CA9030202 |
247 | R>Q | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
VAR_079912 rs143106549 CA9030201 |
247 | R>W | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA402959174 rs1182260952 |
248 | V>M | No |
ClinGen gnomAD |
|
|
rs767682153 CA9030203 |
250 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1474344546 CA402959195 |
251 | A>V | No |
ClinGen gnomAD |
|
|
rs935264057 CA303979540 |
252 | V>A | No |
ClinGen Ensembl |
|
|
rs750645579 CA9030204 |
252 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756258043 CA9030205 |
254 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs753790329 CA402959213 |
255 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030207 rs753790329 |
255 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1377522698 CA402959230 |
257 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA402959235 rs1231062783 |
258 | W>* | No |
ClinGen gnomAD |
|
|
rs1599456082 CA402959238 |
258 | W>* | No |
ClinGen Ensembl |
|
|
CA402959254 rs1329204211 |
261 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA9030208 rs754863215 |
265 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1322031427 CA402959287 |
267 | K>* | No |
ClinGen TOPMed |
|
|
CA303979542 rs935861107 |
267 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1568389839 CA402959302 |
269 | L>P | No |
ClinGen Ensembl |
|
|
CA303979543 rs917800956 |
270 | P>T | No |
ClinGen Ensembl |
|
|
rs947877973 CA303979544 |
271 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs947877973 CA402959314 |
271 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA9030210 rs747939936 |
272 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030211 rs771883513 |
272 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA402959327 rs1334152519 |
274 | L>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA402959331 rs1437808655 |
275 | P>S | No |
ClinGen TOPMed |
|
|
rs1309414183 CA402959341 |
276 | P>S | No |
ClinGen gnomAD |
|
|
CA402959355 rs1350758650 |
277 | G>E | No |
ClinGen gnomAD |
|
| TCGA novel | 277 | G>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs746604370 CA9030213 |
280 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370044469 CA9030214 |
280 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1406842783 CA402959388 |
282 | G>R | No |
ClinGen TOPMed |
|
|
rs1207075456 CA402959395 |
283 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA402959396 rs1266158783 |
283 | E>A | No |
ClinGen TOPMed |
|
|
rs1207075456 CA402959393 |
283 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1248222064 CA402959402 |
284 | V>E | No |
ClinGen TOPMed |
|
|
rs906909579 CA402959401 CA303979547 |
284 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs906909579 CA303979546 |
284 | V>M | No |
ClinGen TOPMed gnomAD |
|
| VAR_079913 | 285 | A>G | found in a patient with autism spectrum disorder; unknown pathological significance [UniProt] | No | UniProt |
|
CA9030217 rs769328388 |
285 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA303979548 rs547921611 |
286 | R>* | No |
ClinGen 1000Genomes gnomAD |
|
|
CA9030218 rs374404176 |
286 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030219 rs762142662 |
287 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402959413 rs762142662 |
287 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402959422 rs1393829583 |
288 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA9030220 rs540083868 |
288 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 289 | L>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA303979549 rs1030541753 |
289 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1169625262 CA402959423 |
289 | L>V | No |
ClinGen gnomAD |
|
|
rs1287453593 CA402959440 |
291 | A>V | No |
ClinGen TOPMed |
|
|
CA402959441 rs1326495200 |
292 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs766471444 CA9030223 |
292 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA402959457 rs1436603386 |
294 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1368706264 CA402959481 |
297 | V>G | No |
ClinGen gnomAD |
|
|
CA303979550 rs889331617 |
298 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1599456238 CA402959501 |
301 | A>P | No |
ClinGen Ensembl |
|
|
CA9030226 rs778769818 |
302 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs61744435 CA9030225 |
302 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs866839280 CA303979552 |
303 | A>T | No |
ClinGen Ensembl |
|
|
CA402959513 rs1292349056 |
303 | A>V | No |
ClinGen gnomAD |
|
|
rs1248412250 CA402959517 |
304 | L>P | No |
ClinGen TOPMed |
|
|
rs1198284575 CA402959522 |
305 | G>D | No |
ClinGen gnomAD |
|
|
CA402959528 rs1251602206 |
306 | S>N | No |
ClinGen gnomAD |
|
|
rs576700288 CA9030228 |
307 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1032129780 CA303979553 |
308 | A>G | No |
ClinGen Ensembl |
|
|
rs756928981 CA9030231 |
314 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402959579 rs756928981 |
314 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402959580 rs1197938032 |
314 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1405373141 CA402959583 |
315 | A>T | No |
ClinGen gnomAD |
|
|
CA402959589 rs1366375915 |
316 | L>I | No |
ClinGen TOPMed |
|
|
rs917854803 CA402959609 |
319 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs61744452 CA9030232 |
319 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA303979554 rs917854803 |
319 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA402959617 rs1298292181 |
320 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA402959614 rs1298292181 |
320 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA402959626 rs1191329406 |
321 | V>F | No |
ClinGen gnomAD |
|
|
CA402959672 rs969272202 |
323 | C>* | No |
ClinGen TOPMed |
|
|
CA402959663 rs1224994211 |
323 | C>R | No |
ClinGen gnomAD |
|
|
CA303979556 rs573588554 |
324 | G>R | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs573588554 CA402959674 |
324 | G>W | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1390541383 CA402959687 |
326 | L>V | No |
ClinGen TOPMed |
|
| TCGA novel | 327 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs909035620 CA303979557 |
327 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs948615995 CA303979559 |
328 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA303979560 rs762499974 |
329 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA9030236 rs748625717 CA303979561 |
330 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC TOPMed gnomAD NCI-TCGA |
|
CA9030237 rs200777913 VAR_079914 |
332 | E>K | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1599456373 CA402959773 |
333 | S>F | No |
ClinGen Ensembl |
|
|
CA303979563 rs1051342020 |
334 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1384202207 CA402959807 |
335 | G>E | No |
ClinGen gnomAD |
|
|
COSM1611452 VAR_079915 CA303979567 rs1043645806 |
336 | R>C | liver found in a patient with schizophrenia; unknown pathological significance [Cosmic, UniProt] | No |
ClinGen cosmic curated UniProt TOPMed dbSNP gnomAD |
|
rs904681158 CA303979568 |
336 | R>H | No |
ClinGen TOPMed gnomAD |
|
| rs1178087803 | 340 | R>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA303979570 rs577413695 |
340 | R>Q | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA303979569 rs889997671 |
340 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1378168693 CA402961371 |
341 | F>V | No |
ClinGen gnomAD |
|
|
CA9030259 rs369346897 |
342 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA9030260 rs771277255 |
343 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs776839228 CA9030261 |
344 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030262 rs374855408 |
345 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402961447 rs1430641842 |
345 | T>P | No |
ClinGen gnomAD |
|
|
CA402961517 rs1388615835 |
348 | Q>* | No |
ClinGen gnomAD |
|
|
rs372649188 CA9030264 |
350 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs144334537 CA9030265 VAR_079916 |
350 | R>H | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA9030266 rs1389754514 |
351 | T>M | No |
ClinGen TOPMed |
|
|
rs1599457022 CA402961555 |
351 | T>P | No |
ClinGen Ensembl |
|
|
rs751530516 CA9030269 |
353 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA402961612 rs767354179 |
354 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030271 rs767354179 |
354 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402961637 rs1211238317 |
355 | W>* | No |
ClinGen gnomAD |
|
|
rs545162012 CA303979702 |
355 | W>C | No |
ClinGen 1000Genomes gnomAD |
|
|
rs757226574 CA9030272 |
356 | V>* | No |
ClinGen ExAC gnomAD |
|
|
rs750117365 CA9030273 |
356 | V>A | No |
ClinGen ExAC |
|
|
CA9030274 rs755747069 |
357 | T>A | No |
ClinGen ExAC |
|
|
CA9030278 rs75047944 |
358 | G>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs779463732 CA9030277 |
358 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs778317218 CA9030280 |
359 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1169949575 CA402961759 |
360 | S>F | No |
ClinGen gnomAD |
|
|
rs1459446379 CA402961769 |
361 | Q>* | No |
ClinGen gnomAD |
|
|
rs1294207686 CA402961781 |
361 | Q>H | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 362 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs928219719 CA303979703 |
363 | H>D | No |
ClinGen TOPMed |
|
|
CA9030283 rs771295633 |
363 | H>Q | No |
ClinGen ExAC |
|
|
CA9030284 rs781486264 |
365 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA9030287 rs770093108 |
366 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030286 rs770093108 |
366 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030285 rs549590961 |
366 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402961862 rs1350792424 |
367 | H>Y | No |
ClinGen TOPMed |
|
|
rs763153384 CA9030288 |
369 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA402961889 rs1214385863 |
369 | K>Q | No |
ClinGen gnomAD |
|
|
CA9030289 rs768852310 |
370 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs761787718 CA402961927 |
371 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761787718 CA9030291 |
371 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767446155 CA9030293 |
372 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1467671655 CA402961934 |
372 | S>R | No |
ClinGen gnomAD |
|
|
rs1231064109 CA402961941 |
372 | S>T | No |
ClinGen TOPMed |
|
|
rs1249843318 CA402961962 |
374 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA402961963 rs760358935 |
374 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030294 rs760358935 |
374 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753425600 CA402961968 |
375 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375661484 CA9030297 |
375 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9030296 rs753425600 |
375 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778333616 CA9030298 |
377 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs74667913 CA303979704 |
378 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA9030299 rs371184224 |
378 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402962023 rs373298742 |
380 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030301 rs373298742 |
380 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1430388903 CA402962028 |
380 | A>V | No |
ClinGen gnomAD |
|
|
COSM3821815 rs935843296 VAR_079917 CA303979705 |
381 | P>L | Variant assessed as Somatic; 0.0 impact. breast found in a patient with schizophrenia; unknown pathological significance [NCI-TCGA, Cosmic, UniProt] | No |
ClinGen cosmic curated UniProt NCI-TCGA TOPMed dbSNP gnomAD |
|
CA9030302 rs746291615 |
381 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs75794325 CA9030304 |
382 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749404495 CA9030305 |
382 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA402962058 rs1269869033 |
383 | W>* | No |
ClinGen gnomAD |
|
|
rs528711346 CA9030307 |
385 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030309 rs772178419 |
386 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA303979706 rs546896691 |
386 | V>M | No |
ClinGen 1000Genomes |
|
|
CA402962106 rs1417439117 |
388 | S>G | No |
ClinGen gnomAD |
|
|
rs1599457189 CA402962114 |
389 | W>R | No |
ClinGen Ensembl |
|
|
rs760582633 CA9030311 |
390 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA9030310 rs370995692 |
390 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030312 rs766018848 |
391 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA303979707 rs766018848 |
391 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1412871049 CA402962125 |
391 | D>N | No |
ClinGen gnomAD |
|
|
CA9030315 rs764757965 |
392 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs375645814 CA9030314 |
392 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402962146 rs1328265098 |
393 | Q>* | No |
ClinGen TOPMed |
|
|
rs1484906621 CA402962157 CA402962159 |
393 | Q>H | No |
ClinGen gnomAD |
|
| TCGA novel | 395 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs12978900 CA9030317 |
396 | L>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1412314998 CA402962203 |
397 | E>G | No |
ClinGen gnomAD |
|
|
rs768071466 CA9030318 |
398 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs768071466 CA402962218 |
398 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA402962236 rs1223110899 |
400 | G>S | No |
ClinGen gnomAD |
|
| TCGA novel | 402 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749551084 CA9030322 |
403 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402962270 rs1211342994 |
403 | A>T | No |
ClinGen gnomAD |
|
|
CA9030325 rs748290098 |
404 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs4807399 CA9030324 VAR_019677 |
404 | R>W | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA9030326 rs772270429 |
405 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA303979708 rs772270429 |
405 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402962293 rs1469737522 |
405 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1469737522 CA402962290 |
405 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA9030329 rs149631723 |
406 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs149631723 CA9030330 |
406 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030328 rs746860925 |
406 | P>T | No |
ClinGen ExAC |
|
|
CA9030334 rs573078457 |
407 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9030333 rs573078457 |
407 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs764918112 CA402962308 |
407 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA9030332 rs764918112 |
407 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs144402697 CA9030337 |
408 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs144402697 CA9030336 |
408 | P>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402962316 rs1335806422 |
408 | P>T | No |
ClinGen gnomAD |
|
|
rs754197277 CA9030339 |
409 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402962362 rs1235005921 |
410 | G>S | No |
ClinGen gnomAD |
|
|
CA9030340 rs755376191 |
410 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1345522135 CA402962393 |
411 | A>T | No |
ClinGen gnomAD |
|
|
CA402962402 rs1207535623 |
411 | A>V | No |
ClinGen gnomAD |
|
|
rs200418870 CA9030343 |
414 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs545415520 CA303979709 |
414 | W>C | No |
ClinGen 1000Genomes gnomAD |
|
|
CA402962452 rs2240157 |
414 | W>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9030342 rs2240157 VAR_019678 |
414 | W>R | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1193630389 CA402962467 |
415 | P>A | No |
ClinGen gnomAD |
|
|
rs1193630389 CA402962470 |
415 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 416 | K>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777662897 CA9030345 |
417 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770812032 CA9030347 |
418 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030348 rs201293199 |
418 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402962535 rs201293199 |
418 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030346 rs770812032 |
418 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030350 rs199836408 |
421 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 424 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs147521452 CA9030353 |
425 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761357444 CA9030354 |
428 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1472137565 CA402962768 |
430 | A>P | No |
ClinGen TOPMed |
|
|
rs1472137565 CA402962771 |
430 | A>S | No |
ClinGen TOPMed |
|
|
CA9030355 rs766848212 |
430 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754387721 CA9030356 |
431 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201092021 COSM320715 CA9030357 |
431 | R>H | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs563617329 CA303979710 |
433 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs563617329 CA9030359 |
433 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9030362 rs201638380 |
435 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs781058218 CA9030364 |
437 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745740525 CA9030365 |
440 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1461530460 CA402962999 |
440 | P>T | No |
ClinGen gnomAD |
|
|
CA402963030 rs1383644556 |
441 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA402963055 rs892110155 |
443 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA402963062 rs1404462595 |
443 | Q>H | No |
ClinGen TOPMed |
|
|
CA303979711 rs892110155 |
443 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
CA9030369 rs768236351 |
443 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs768236351 CA402963058 |
443 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1335490154 CA402963077 |
444 | L>P | No |
ClinGen gnomAD |
|
|
rs774035095 CA9030370 |
445 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761292242 CA9030371 |
446 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs771611326 CA9030372 |
447 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751621630 CA303979712 |
447 | D>N | No |
ClinGen gnomAD |
|
|
rs760067939 CA9030374 |
448 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1190517002 CA402963137 |
449 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1190517002 CA402963141 |
449 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs753149188 CA9030376 |
450 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs1455277873 CA402963699 |
451 | N>D | No |
ClinGen gnomAD |
|
|
CA9030380 rs201601935 |
452 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757287420 CA9030381 |
453 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402963718 rs1356341027 |
454 | A>T | No |
ClinGen gnomAD |
|
|
CA9030383 rs149732272 |
455 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs145632166 CA9030386 |
457 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs778500000 CA303979758 |
458 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030387 rs61750461 |
458 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9030388 rs778500000 |
458 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1485786073 CA402963806 |
459 | L>P | No |
ClinGen gnomAD |
|
|
rs76859376 CA303979764 |
460 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030392 rs568781579 |
461 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030395 rs770471437 |
462 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377106421 CA9030396 |
462 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763293595 CA9030397 |
463 | L>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 464 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9030400 rs774451027 |
465 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA303979775 rs964135310 |
466 | G>S | No |
ClinGen TOPMed |
|
|
CA402963913 rs1306831767 |
467 | S>T | No |
ClinGen gnomAD |
|
|
rs1237221247 CA402963933 |
468 | A>P | No |
ClinGen gnomAD |
|
|
rs750543592 CA9030405 |
468 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs933848477 CA303979790 |
469 | P>S | No |
ClinGen TOPMed |
|
|
rs533006807 CA303979793 |
470 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1253903191 VAR_079918 CA402963975 |
470 | R>H | found in a patient with schizophrenia; unknown pathological significance [UniProt] | No |
ClinGen UniProt dbSNP gnomAD |
|
rs1253903191 CA402963980 |
470 | R>L | No |
ClinGen gnomAD |
|
|
rs753813570 CA9030408 |
471 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs1599457596 CA402964011 VAR_079919 |
472 | L>P | found in a patient with autism spectrum disorder; unknown pathological significance [UniProt] | No |
ClinGen UniProt Ensembl dbSNP |
|
rs754737058 CA9030409 |
473 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754737058 CA9030410 |
473 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747783907 COSM336089 CA9030411 |
473 | R>H | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA402964031 rs747783907 |
473 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402964028 rs747783907 |
473 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402964035 rs1453603545 |
474 | K>Q | No |
ClinGen gnomAD |
|
|
rs758162921 CA9030412 |
476 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA402964094 rs758162921 |
476 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA9030413 rs777543158 |
477 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA303979804 rs945871154 |
478 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs776145597 CA9030416 |
479 | Y>* | No |
ClinGen ExAC TOPMed |
|
|
CA9030415 rs140599178 |
479 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA303979808 rs1045561835 |
480 | C>R | No |
ClinGen Ensembl |
|
|
CA402964206 rs1599457647 |
481 | I>L | No |
ClinGen Ensembl |
|
|
CA402964216 rs1304870574 |
481 | I>T | No |
ClinGen gnomAD |
|
|
rs558873297 CA9030419 |
485 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402964276 rs558873297 |
485 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030421 rs767778650 |
486 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030420 rs762054649 |
486 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201400509 CA9030422 |
487 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1253584758 CA402964314 |
487 | L>R | No |
ClinGen gnomAD |
|
|
CA9030423 rs201400509 |
487 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199811690 CA9030425 |
488 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030424 rs766382202 |
488 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs199811690 CA9030426 |
488 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030430 rs201453184 |
489 | E>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1001941197 CA303979822 |
489 | E>D | No |
ClinGen TOPMed |
|
|
rs201453184 CA9030429 |
489 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs752584001 CA9030428 |
489 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs878889783 CA303979825 |
490 | D>G | No |
ClinGen gnomAD |
|
|
rs1488238745 CA402964335 |
490 | D>N | No |
ClinGen gnomAD |
|
|
COSM3692282 CA9030431 rs746593296 |
491 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1599457729 CA402964361 |
492 | P>T | No |
ClinGen Ensembl |
|
|
rs374588471 CA9030435 |
494 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs748572980 CA402964465 |
495 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774699784 CA9030436 |
495 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs148079660 CA9030439 |
496 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030438 rs148079660 |
496 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1234603544 CA402964500 |
497 | L>R | No |
ClinGen gnomAD |
|
|
CA303979834 rs557297164 |
498 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030445 rs377572345 |
500 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030444 rs377572345 |
500 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030446 rs762844769 |
501 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780952297 CA9030448 |
503 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402964646 rs1377023082 |
504 | K>R | No |
ClinGen TOPMed |
|
|
CA402964688 rs377629131 |
506 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030451 rs749999498 |
506 | G>D | No |
ClinGen ExAC gnomAD |
|
|
COSM3692283 rs377629131 CA9030450 |
506 | G>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs779544648 CA9030453 |
507 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 507 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 508 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402964722 rs1422064978 |
508 | L>P | No |
ClinGen TOPMed |
|
|
rs778067974 CA402964733 |
509 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030456 rs778067974 |
509 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030455 rs140937568 |
509 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402964763 rs1354317125 |
511 | G>D | No |
ClinGen gnomAD |
|
|
rs771231260 CA9030458 |
511 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs560397587 CA9030459 |
512 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370718312 CA9030460 |
512 | R>H | No |
ClinGen ESP ExAC gnomAD |
|
|
rs769694480 CA9030461 |
513 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs967264827 CA303979858 |
513 | W>L | No |
ClinGen TOPMed |
|
|
rs981302100 CA402964818 |
514 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs981302100 CA303979862 |
514 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
rs375104717 CA9030463 VAR_079920 |
515 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen UniProt ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1286407976 CA402964871 |
516 | L>R | No |
ClinGen TOPMed |
|
|
CA9030465 rs751442184 |
517 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA9030466 rs751442184 |
517 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA9030469 rs755657151 |
518 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs750041385 CA9030468 |
518 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402964961 rs1249522834 |
520 | L>R | No |
ClinGen Ensembl |
|
|
rs779377224 CA402964954 |
520 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1157357551 CA402964969 |
521 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs758940693 CA9030473 |
523 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747428238 CA9030475 |
524 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030474 rs79277136 |
524 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402965001 rs1445214432 |
525 | A>P | No |
ClinGen gnomAD |
|
|
CA9030476 rs771193867 |
526 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402965051 rs781479495 |
528 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1373979688 CA402965044 |
528 | A>P | No |
ClinGen gnomAD |
|
|
CA9030477 rs781479495 |
528 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402965072 rs1211808371 |
530 | T>I | No |
ClinGen gnomAD |
|
|
CA9030480 rs775671499 |
531 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA402965106 rs1206736542 |
532 | F>L | No |
ClinGen gnomAD |
|
|
rs200427089 CA9030481 |
533 | S>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030482 rs768764234 |
534 | I>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 534 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9030484 rs761737323 |
537 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA9030486 rs369654068 |
538 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030487 rs760201230 |
538 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402965176 rs369654068 |
538 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030489 rs753392205 |
540 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754468082 CA9030490 COSM389260 |
540 | Q>H | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1599457960 CA402965210 |
542 | V>G | No |
ClinGen Ensembl |
|
|
rs201275581 CA303979913 |
544 | F>I | No |
ClinGen 1000Genomes |
|
|
rs200764507 CA9030492 |
546 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1302882683 CA402965237 |
546 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA402965241 rs1343120439 |
547 | P>S | No |
ClinGen gnomAD |
|
|
CA303979923 rs997385828 |
550 | S>A | No |
ClinGen Ensembl |
|
|
rs781361860 CA9030496 |
550 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA9030497 rs147505119 |
552 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1469130780 CA402965275 |
552 | S>I | No |
ClinGen gnomAD |
|
|
CA402965287 rs1193415635 |
554 | G>V | No |
ClinGen gnomAD |
|
|
CA9030498 rs188035828 |
555 | I>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA402965305 rs1476834423 |
556 | M>V | No |
ClinGen gnomAD |
|
|
rs562464816 CA9030499 |
557 | V>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9030501 rs138502614 |
558 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749437943 COSM1158537 CA9030500 |
558 | R>W | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA9030502 rs774436628 |
559 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA9030504 rs529697416 |
560 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030503 rs143489067 |
560 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1433132437 CA402965362 |
561 | D>G | No |
ClinGen gnomAD |
|
|
rs772846784 CA9030505 |
561 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs372884403 CA9030506 |
562 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402965386 rs1259127880 |
563 | A>G | No |
ClinGen TOPMed |
|
|
CA9030508 rs376296317 |
565 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA303979938 rs376296317 |
565 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA303979936 rs981352955 |
565 | P>T | No |
ClinGen gnomAD |
|
|
CA9030510 rs368382957 |
566 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402965433 rs1568390987 |
567 | G>D | No |
ClinGen Ensembl |
|
|
CA9030511 rs566603277 |
567 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402965444 rs1282993828 |
568 | A>G | No |
ClinGen gnomAD |
|
|
CA9030513 rs757664813 |
568 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030512 rs757664813 |
568 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030514 rs750803476 |
570 | M>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1236837550 CA402965462 |
570 | M>V | No |
ClinGen TOPMed |
|
|
COSM1398318 rs527469125 CA9030515 |
571 | W>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1477177013 CA402965492 |
572 | P>S | No |
ClinGen gnomAD |
|
|
CA9030516 rs199815808 |
573 | L>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402965521 rs1216203646 |
574 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA402965515 rs1419474839 |
574 | H>R | No |
ClinGen gnomAD |
|
|
rs112116006 CA9030517 |
575 | W>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs112116006 CA9030518 |
575 | W>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9030519 rs779091346 |
576 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA402965544 rs1388251997 |
576 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs2240158 CA9030520 VAR_019679 |
577 | T>M | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA402965572 rs1340132325 |
578 | W>* | No |
ClinGen gnomAD |
|
|
rs1340132325 CA402965575 |
578 | W>C | No |
ClinGen gnomAD |
|
|
rs746787377 CA402965599 |
581 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA9030523 rs746787377 |
581 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA9030525 rs776325201 |
582 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030526 rs759167823 |
583 | A>S | No |
ClinGen ExAC |
|
|
CA9030527 VAR_079921 rs769335041 COSM123484 |
583 | A>V | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated UniProt ExAC TOPMed dbSNP gnomAD |
|
CA402965653 rs1263676751 |
585 | L>P | No |
ClinGen TOPMed |
|
| TCGA novel | 586 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1284079631 CA402965659 |
586 | H>Y | No |
ClinGen gnomAD |
|
|
CA9030531 rs767921850 |
587 | L>R | No |
ClinGen ExAC TOPMed |
|
|
rs1191120068 CA402965673 |
587 | L>V | No |
ClinGen gnomAD |
|
|
rs750874613 CA9030532 |
588 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA9030534 rs766834763 |
589 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402965698 COSM438434 rs1366648289 |
589 | A>V | Variant assessed as Somatic; 4.626e-05 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA402965706 rs1158913310 |
590 | L>F | No |
ClinGen gnomAD |
|
|
CA9030536 rs755216578 |
590 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs779232737 CA9030537 |
591 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs752736885 CA9030538 |
592 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA303979969 rs900050310 |
592 | L>P | No |
ClinGen TOPMed |
|
|
rs1376093805 CA402965737 |
593 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs758440584 CA9030539 |
593 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs746954525 CA9030541 |
594 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030543 rs770764248 |
595 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745623964 CA9030544 |
596 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402965786 rs745623964 |
596 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
VAR_079922 CA9030545 rs139187576 |
598 | R>C | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs372595568 CA9030546 |
598 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030547 rs762373663 |
599 | S>R | No |
ClinGen ExAC |
|
|
rs1485675989 CA402965844 |
600 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs768207134 CA9030548 |
600 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402965842 rs768207134 |
600 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 601 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs556153075 CA9030551 |
602 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA402965892 rs765385702 |
604 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030556 rs758468524 |
605 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA402965913 rs1465782813 |
606 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs139930791 CA9030557 |
606 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA303979983 rs139930791 |
606 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751539188 CA9030558 |
607 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA9030559 rs144243602 |
608 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA9030560 rs540348423 VAR_079923 |
608 | R>H | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs1375097753 CA402965950 |
609 | N>K | No |
ClinGen gnomAD |
|
|
rs145253713 CA9030561 |
610 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402965958 rs145253713 |
610 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs78360368 CA9030562 |
610 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402965966 rs1599458321 |
611 | S>G | No |
ClinGen Ensembl |
|
|
rs60621387 CA9030563 VAR_061188 |
612 | T>A | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA9030564 rs748955009 |
612 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA9030566 rs79866475 |
613 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1196256188 CA402966001 |
614 | F>S | No |
ClinGen gnomAD |
|
|
rs77498660 CA303979993 |
615 | S>F | No |
ClinGen Ensembl |
|
|
CA303979991 rs377080093 |
615 | S>P | No |
ClinGen Ensembl |
|
|
CA402966046 rs1456227175 |
617 | S>F | No |
ClinGen gnomAD |
|
|
rs747617576 CA9030568 |
618 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA402966068 rs1253467122 |
619 | A>S | No |
ClinGen gnomAD |
|
|
CA402966086 rs1241763344 |
620 | L>F | No |
ClinGen Ensembl |
|
|
rs868743924 CA303979998 |
621 | N>D | No |
ClinGen Ensembl |
|
|
rs1432790226 CA402966100 |
621 | N>I | No |
ClinGen gnomAD |
|
|
rs866287294 CA303980000 |
623 | C>R | No |
ClinGen Ensembl |
|
|
rs760049445 CA9030571 |
625 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA9030572 rs765625485 |
625 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030573 rs143237368 |
626 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1456104518 CA402966192 |
627 | L>V | No |
ClinGen gnomAD |
|
|
CA9030574 rs151255899 |
630 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs141844970 CA9030575 |
630 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402966248 rs151255899 |
630 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9030579 rs750355849 |
632 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs541884704 CA9030578 |
632 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 634 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs868736382 CA303980009 |
634 | S>N | No |
ClinGen Ensembl |
|
|
CA9030580 rs200178820 |
636 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402966353 rs1308706336 |
636 | T>S | No |
ClinGen gnomAD |
|
| TCGA novel | 638 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9030582 rs147118824 |
638 | K>N | No |
ClinGen ESP ExAC gnomAD |
|
|
rs754686985 CA9030583 |
639 | C>R | No |
ClinGen ExAC gnomAD |
|
|
VAR_079924 rs778377243 CA9030584 |
641 | T>M | found in a patient with autism spectrum disorder; unknown pathological significance [UniProt] | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
| rs1265788787 | 641 | T>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs78844421 CA9030586 |
643 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9030587 rs147694026 |
643 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402966482 rs1599458470 |
644 | L>M | No |
ClinGen Ensembl |
|
|
CA9030588 rs570614338 |
645 | L>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9030592 rs764389800 |
646 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763179471 CA9030591 |
646 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs200400100 CA9030590 |
646 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1599458503 CA402966541 |
647 | N>T | No |
ClinGen Ensembl |
|
|
CA402966538 rs1456741683 |
647 | N>Y | No |
ClinGen gnomAD |
|
|
rs1446224020 CA402966566 |
649 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA402966587 rs1332287002 |
650 | A>V | No |
ClinGen gnomAD |
|
|
rs1291359417 CA402966602 |
651 | I>M | No |
ClinGen gnomAD |
|
|
rs1406940867 CA402966612 |
652 | F>S | No |
ClinGen TOPMed |
|
|
CA9030595 rs767570041 |
655 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402966652 rs1337838530 |
655 | L>P | No |
ClinGen gnomAD |
|
|
CA303980027 rs992107829 |
656 | V>M | No |
ClinGen TOPMed |
|
|
rs760627552 CA9030597 |
657 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030599 rs753685745 |
658 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030600 rs754667370 |
659 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1255015031 CA402966724 |
661 | T>A | No |
ClinGen TOPMed |
|
|
rs778778958 CA9030601 |
661 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030603 rs758034341 |
662 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1182908233 CA402966754 |
663 | N>S | No |
ClinGen gnomAD |
|
|
rs1003563642 CA303980035 |
665 | A>V | No |
ClinGen Ensembl |
|
|
rs202188271 CA9030605 |
666 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs550025296 CA9030607 |
667 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs768898553 CA9030609 |
668 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs929014015 CA402966829 |
669 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
rs929014015 CA303980044 |
669 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs144000255 CA9030612 CA9030611 |
670 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030613 rs773309140 |
671 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs369845966 CA9030614 |
672 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759438437 CA9030617 |
675 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 677 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402966985 rs1284184060 |
677 | L>P | No |
ClinGen gnomAD |
|
|
rs138448790 CA9030621 VAR_079925 |
678 | S>L | No |
ClinGen UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs138448790 CA9030622 |
678 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs769055248 CA9030626 |
681 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1015310421 CA303980057 |
682 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA402967105 rs1157609355 |
683 | P>L | No |
ClinGen gnomAD |
|
| rs1436267052 | 684 | K>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1378117968 CA402967131 |
684 | K>M | No |
ClinGen gnomAD |
|
|
rs1245771547 CA402968319 |
686 | H>N | No |
ClinGen gnomAD |
|
|
rs1016040268 CA303980731 |
688 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1016040268 CA402968366 |
688 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1016040268 CA402968367 |
688 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1049939727 CA303980732 |
689 | A>T | No |
ClinGen TOPMed |
|
|
rs1171395767 CA402968384 |
690 | Q>* | No |
ClinGen gnomAD |
|
|
CA303980734 rs890052638 |
690 | Q>P | No |
ClinGen TOPMed |
|
|
rs762161148 CA303980735 |
691 | G>D | No |
ClinGen Ensembl |
|
|
rs1423800036 CA402968471 |
693 | R>C | No |
ClinGen gnomAD |
|
|
CA402968475 rs1465008411 |
693 | R>H | No |
ClinGen gnomAD |
|
|
rs1315085538 CA402968520 |
695 | G>C | No |
ClinGen TOPMed |
|
|
rs1315085538 CA402968518 |
695 | G>R | No |
ClinGen TOPMed |
|
|
CA402968516 rs1315085538 |
695 | G>S | No |
ClinGen TOPMed |
|
|
rs1405745160 CA402968569 |
697 | V>A | No |
ClinGen gnomAD |
|
|
CA9030646 rs371086518 |
697 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA303980738 rs902540138 |
698 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
rs902540138 CA402968607 |
698 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1041049937 CA303980737 |
698 | W>S | No |
ClinGen TOPMed gnomAD |
|
|
rs779340145 CA9030647 |
699 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA402968706 rs1278892401 |
700 | S>C | No |
ClinGen gnomAD |
|
|
rs1278892401 CA402968704 |
700 | S>G | No |
ClinGen gnomAD |
|
|
CA303980740 rs201299606 |
701 | S>I | No |
ClinGen 1000Genomes |
|
|
CA402968751 rs1339998405 |
701 | S>R | No |
ClinGen gnomAD |
|
|
CA402968762 rs1217281534 |
702 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA402968765 rs1217281534 |
702 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA402968767 rs1217281534 |
702 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA402968782 rs758691413 |
703 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA9030649 rs758691413 |
703 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1288243158 CA402968817 |
704 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1218386864 CA402968850 |
705 | Y>H | No |
ClinGen gnomAD |
|
|
CA9030651 rs747179788 |
705 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776608233 CA9030653 |
706 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs150675081 CA9030652 |
706 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1473120624 CA402968938 |
708 | K>* | No |
ClinGen gnomAD |
|
|
rs1388363759 CA402969072 |
711 | P>T | No |
ClinGen gnomAD |
|
|
rs1398231982 CA402969129 |
713 | M>I | No |
ClinGen gnomAD |
|
|
rs1359932467 CA402969122 |
713 | M>T | No |
ClinGen gnomAD |
|
| TCGA novel | 714 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1341579227 CA402969183 |
715 | A>V | No |
ClinGen gnomAD |
|
|
rs1282755636 CA402969198 |
716 | H>Q | No |
ClinGen gnomAD |
|
|
CA303980746 rs570362912 |
717 | M>I | No |
ClinGen 1000Genomes gnomAD |
|
|
CA402969207 rs1241818307 |
717 | M>K | No |
ClinGen gnomAD |
|
|
CA9030655 rs374467601 |
717 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1247511490 CA402969223 |
718 | R>Q | No |
ClinGen TOPMed |
|
|
rs368362965 CA303980749 |
718 | R>W | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1257743921 CA402969232 |
719 | R>C | No |
ClinGen gnomAD |
|
|
CA402969241 rs1257743921 |
719 | R>G | No |
ClinGen gnomAD |
|
|
CA402969243 rs1442907259 |
719 | R>H | No |
ClinGen gnomAD |
|
|
rs1022847275 CA303980751 |
720 | H>N | No |
ClinGen TOPMed |
|
|
rs1366445622 CA402969255 |
720 | H>P | No |
ClinGen gnomAD |
|
|
CA402969264 rs1441342400 |
720 | H>Q | No |
ClinGen gnomAD |
|
|
rs1366445622 CA402969257 |
720 | H>R | No |
ClinGen gnomAD |
|
|
TCGA novel rs969996342 CA303980753 |
721 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen TOPMed gnomAD NCI-TCGA |
|
rs1379928315 CA402969289 |
722 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA402969300 rs1418162228 |
722 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA402969315 rs1174384589 |
723 | P>H | No |
ClinGen gnomAD |
|
|
CA402969309 rs1174384589 |
723 | P>L | No |
ClinGen gnomAD |
|
|
CA402969335 rs1568392447 |
725 | T>P | No |
ClinGen Ensembl |
|
|
rs763967887 CA9030659 |
726 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA303980757 rs767648585 |
727 | R>H | No |
ClinGen gnomAD |
|
|
CA402969422 rs1448003337 |
728 | G>D | No |
ClinGen gnomAD |
|
|
rs1366413275 CA402969410 |
728 | G>S | No |
ClinGen TOPMed |
|
|
CA402969436 rs1379813880 |
729 | V>A | No |
ClinGen TOPMed |
|
|
CA402969440 rs1379813880 |
729 | V>G | No |
ClinGen TOPMed |
|
|
CA402969445 rs1352525326 |
730 | A>T | No |
ClinGen gnomAD |
|
|
rs1245487311 CA402969471 |
731 | M>V | No |
ClinGen TOPMed |
|
|
rs537364397 CA303980761 |
732 | L>R | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs760240887 CA9030687 |
735 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1568392663 CA402969682 |
735 | D>G | No |
ClinGen Ensembl |
|
|
CA402969676 TCGA novel rs1599460874 |
735 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
|
CA9030688 rs144432988 |
736 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030689 rs144432988 |
736 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030691 rs577760723 |
737 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs148406831 CA9030692 |
737 | P>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs148406831 CA9030694 |
737 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9030693 rs148406831 |
737 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9030690 rs577760723 |
737 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs577760723 CA402969728 |
737 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs756309853 CA9030697 |
738 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA402969752 rs1426132338 |
738 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs952462581 CA303980782 |
739 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA402969801 rs1457075815 |
740 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs749339005 CA402969805 |
741 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749339005 CA9030698 |
741 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA303980784 rs985211442 |
742 | F>V | No |
ClinGen TOPMed |
|
|
CA402969882 rs1400094333 |
743 | I>M | No |
ClinGen gnomAD |
|
|
rs142637512 CA9030700 |
744 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA303980785 rs368118765 |
745 | D>E | No |
ClinGen ESP TOPMed |
|
|
CA402969910 rs1359777027 |
745 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1359777027 CA402969914 |
745 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1229999834 CA402969939 |
746 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs146031397 CA9030701 |
747 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402969952 rs1244885741 |
747 | S>P | No |
ClinGen TOPMed |
|
|
rs1488623016 CA402970071 |
751 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
rs139897544 CA9030704 |
751 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139897544 CA402970064 |
751 | Y>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030705 rs760293810 |
752 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402970185 rs1183000741 |
754 | S>C | No |
ClinGen gnomAD |
|
|
rs759031411 CA9030709 |
756 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA402971084 rs764514861 |
757 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764514861 CA9030710 |
757 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030712 rs762142729 |
758 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402971101 rs1157498191 |
758 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA402971104 rs1157498191 |
758 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA9030713 rs767902694 |
760 | K>E | No |
ClinGen ExAC |
|
|
rs1450072601 CA402971196 |
762 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1450072601 CA402971199 |
762 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs756436281 CA9030715 |
764 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1311253681 CA402971273 |
765 | G>* | No |
ClinGen gnomAD |
|
|
rs1239743627 CA402971310 |
767 | P>S | No |
ClinGen gnomAD |
|
|
rs964944972 CA303980792 |
768 | F>L | No |
ClinGen Ensembl |
|
|
rs201937512 CA9030718 |
769 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs778778005 CA9030719 |
770 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1343742957 CA402971550 |
772 | G>D | No |
ClinGen gnomAD |
|
|
CA402971421 rs200432745 |
772 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030720 rs200432745 |
772 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1220956345 CA402971565 |
773 | Y>C | No |
ClinGen gnomAD |
|
|
CA402971587 rs1262879418 |
774 | G>A | No |
ClinGen gnomAD |
|
|
CA9030748 rs745513018 |
775 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs369547465 CA9030749 |
776 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402971631 rs1221914573 |
777 | L>Q | No |
ClinGen gnomAD |
|
|
rs748696110 CA9030751 |
777 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA9030752 rs372793600 |
778 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030753 rs372793600 |
778 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1489657134 CA402971652 |
779 | Q>* | No |
ClinGen gnomAD |
|
|
rs761184700 CA9030754 |
779 | Q>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 780 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9030755 rs766832820 |
780 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs776765273 CA9030756 |
781 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373330225 CA9030760 |
782 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402971705 rs373330225 |
782 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373330225 CA9030761 |
782 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs151208360 CA303980834 |
782 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030759 rs151208360 |
782 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1264373888 CA402971712 |
783 | L>I | No |
ClinGen TOPMed |
|
|
CA9030764 rs751485809 |
784 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA303980839 rs751485809 |
784 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA402971762 rs1568393136 |
786 | N>D | No |
ClinGen Ensembl |
|
|
rs374542881 COSM990335 CA9030767 |
789 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA402971799 rs374542881 |
789 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA303980846 rs890188741 |
790 | F>C | No |
ClinGen TOPMed |
|
|
rs1286302047 CA402971844 |
791 | I>T | No |
ClinGen gnomAD |
|
|
rs1225932892 CA402971835 |
791 | I>V | No |
ClinGen gnomAD |
|
|
rs202092512 COSM1239027 CA9030768 |
793 | R>C | oesophagus [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1228498109 CA402971867 COSM1711561 |
793 | R>H | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA303980849 rs980852398 |
795 | K>N | No |
ClinGen TOPMed |
|
|
rs1017272218 CA303980848 |
795 | K>R | No |
ClinGen Ensembl |
|
|
rs755812271 CA9030769 |
796 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778478219 CA9030773 |
798 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030772 rs139755201 |
798 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA303980857 rs897028729 |
800 | I>N | No |
ClinGen TOPMed |
|
|
CA402972065 rs1163101994 |
801 | D>E | No |
ClinGen gnomAD |
|
|
CA9030774 rs747493095 |
801 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs868306075 CA303980859 |
801 | D>N | No |
ClinGen Ensembl |
|
|
rs1383599940 CA402972101 |
803 | L>F | No |
ClinGen gnomAD |
|
|
CA9030775 rs557070048 |
803 | L>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030778 rs759763639 |
804 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA303980864 rs929882528 |
804 | H>Y | No |
ClinGen TOPMed |
|
|
CA402972164 rs1336758597 |
805 | D>G | No |
ClinGen gnomAD |
|
|
rs575518840 CA9030779 |
805 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs374423940 CA402972173 |
806 | K>* | No |
ClinGen ESP TOPMed |
|
|
rs374423940 CA303980868 |
806 | K>E | No |
ClinGen ESP TOPMed |
|
|
CA402972321 rs1454175675 |
811 | V>L | No |
ClinGen gnomAD |
|
|
CA303980870 rs1048316485 |
812 | P>S | No |
ClinGen TOPMed |
|
|
CA9030780 rs775574731 |
813 | C>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402972378 rs1341378599 |
813 | C>Y | No |
ClinGen gnomAD |
|
|
CA402972405 rs1599461729 |
814 | G>D | No |
ClinGen Ensembl |
|
|
CA9030782 rs764137181 |
814 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030784 rs761771815 |
815 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs145692590 CA9030783 |
815 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1286046297 CA402972436 |
816 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA402972451 rs77030329 |
816 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs77030329 CA9030786 |
816 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402972433 rs1286046297 |
816 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs755798638 CA9030787 |
817 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs753524667 CA9030789 |
818 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030791 rs754580037 |
819 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754580037 CA9030790 |
819 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030793 rs771581483 |
820 | V>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1599461795 CA402972557 |
822 | E>G | No |
ClinGen Ensembl |
|
|
CA9030794 rs781488497 |
822 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs766297511 CA402972704 |
823 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766297511 CA9030842 |
823 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1460111996 CA402972715 |
825 | Q>H | No |
ClinGen gnomAD |
|
|
CA9030843 rs776586875 |
825 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402972725 rs1412390938 |
826 | M>I | No |
ClinGen TOPMed |
|
|
rs759340074 CA9030844 |
826 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1365589972 CA402972736 |
827 | S>N | No |
ClinGen gnomAD |
|
|
CA9030846 rs752388570 |
828 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA402972756 rs1300810705 |
828 | I>T | No |
ClinGen gnomAD |
|
|
CA402972769 rs1382748465 |
829 | Y>F | No |
ClinGen gnomAD |
|
|
rs757980012 CA9030847 |
830 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA402972811 rs1247178156 |
831 | F>L | No |
ClinGen gnomAD |
|
|
rs763480684 CA9030848 |
831 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA402972821 rs1292797212 |
831 | F>S | No |
ClinGen gnomAD |
|
|
CA9030849 rs78914045 |
832 | A>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402972838 rs78914045 |
832 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA303981036 rs867266865 |
832 | A>P | No |
ClinGen gnomAD |
|
|
rs867266865 CA402972828 |
832 | A>T | No |
ClinGen gnomAD |
|
|
rs78914045 CA9030850 |
832 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs780479147 CA303981041 |
833 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs780479147 CA9030851 |
833 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA9030852 rs749656837 |
834 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA303981046 rs879355156 |
834 | L>V | No |
ClinGen Ensembl |
|
|
rs772230740 CA9030856 |
836 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs748291838 CA9030855 |
836 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402972927 rs1161098999 |
837 | L>* | No |
ClinGen gnomAD |
|
|
rs1454212281 CA402972973 |
839 | C>F | No |
ClinGen TOPMed gnomAD |
|
|
CA402972966 rs1568393758 |
839 | C>G | No |
ClinGen Ensembl |
|
|
rs1454212281 CA402972969 |
839 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA9030859 rs747060351 |
840 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1315547283 CA402973027 |
843 | G>D | No |
ClinGen gnomAD |
|
| TCGA novel | 844 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
VAR_019680 rs2285906 CA9030861 |
845 | A>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA402973055 rs1343237158 |
848 | S>R | No |
ClinGen TOPMed |
|
|
rs1184589445 CA402973065 |
849 | S>* | No |
ClinGen gnomAD |
|
|
CA9030863 rs765106552 |
849 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs762545444 CA9030865 |
850 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1386826113 CA402973069 |
850 | L>V | No |
ClinGen TOPMed |
|
|
rs201161474 CA9030866 |
851 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9030868 RCV000961570 rs61744375 |
852 | E>K | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1343360657 CA402973085 |
853 | H>D | No |
ClinGen gnomAD |
|
|
CA9030870 rs766936575 |
854 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs766936575 CA9030869 |
854 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1389305653 CA402973103 |
854 | A>V | No |
ClinGen TOPMed |
|
|
rs753062184 CA9030873 |
855 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA9030872 rs779213254 |
855 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA9030871 rs755385031 |
855 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs758569176 CA9030874 |
856 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs572399176 CA303981071 |
857 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs572399176 CA9030876 |
857 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771123779 CA402973138 |
857 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030877 rs771123779 |
857 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs572399176 CA402973135 |
857 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs867567163 CA303981075 |
858 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA9030879 rs142667043 |
859 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA9030882 rs762752908 |
861 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774047875 CA9030884 |
863 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM990338 CA9030885 rs761286442 |
864 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA402973225 rs1468054301 |
864 | R>L | No |
ClinGen gnomAD |
|
|
CA9030887 rs766991579 |
865 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030889 rs760063089 |
866 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1296500173 CA402973249 COSM1208988 |
866 | G>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA402973259 rs1381223013 |
867 | S>G | No |
ClinGen TOPMed |
|
|
CA402973280 rs1568393919 |
868 | R>K | No |
ClinGen Ensembl |
|
|
CA402973287 rs1283218479 |
868 | R>S | No |
ClinGen gnomAD |
|
|
rs1322104654 CA402973293 |
869 | L>P | No |
ClinGen gnomAD |
|
|
rs1365839787 CA402973303 |
870 | Q>R | No |
ClinGen TOPMed |
|
|
CA402973318 rs1220844544 |
871 | Y>S | No |
ClinGen gnomAD |
|
|
CA9030892 rs758788427 |
874 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA303981094 rs921708348 |
874 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA402973387 rs1203397974 |
874 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs536478493 CA9030893 |
876 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs554888496 CA9030894 |
876 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA402973442 CA402973439 rs757457257 |
876 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1420025269 CA402973446 |
877 | Q>K | No |
ClinGen gnomAD |
|
|
rs781452577 CA9030896 |
877 | Q>R | No |
ClinGen ExAC TOPMed |
|
|
CA402973572 rs1244795898 |
878 | K>E | No |
ClinGen gnomAD |
|
|
CA402973575 rs1445409079 |
878 | K>T | No |
ClinGen gnomAD |
|
|
CA402973595 rs1183250979 COSM3959452 |
879 | I>S | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA402973587 rs1599463123 |
879 | I>V | No |
ClinGen Ensembl |
|
|
CA402973604 rs1383386252 |
880 | H>Y | No |
ClinGen gnomAD |
|
|
rs763551432 CA9030936 |
881 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030935 rs763551432 |
881 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402973621 rs774869873 |
881 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA303981153 rs774869873 |
881 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030937 rs774869873 |
881 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1339083576 CA402973631 |
882 | A>G | No |
ClinGen gnomAD |
|
|
CA9030939 rs762202686 |
882 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030938 rs762202686 |
882 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030941 rs181691646 |
883 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402973641 rs1313931708 |
884 | N>D | No |
ClinGen gnomAD |
|
|
CA9030942 rs766447041 |
884 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA9030943 rs753816241 |
885 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs200081897 CA9030944 |
885 | T>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402973669 rs758183016 |
886 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs987179785 CA303981160 |
886 | E>D | No |
ClinGen Ensembl |
|
|
rs758183016 CA9030947 |
886 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376554911 CA9030948 |
887 | P>T | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
CA9030950 rs150329173 |
888 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1241512074 CA402973714 |
890 | G>E | No |
ClinGen gnomAD |
|
|
rs776228228 CA9030952 |
891 | S>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs776228228 CA9030951 |
891 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs774996661 CA303981173 |
894 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1568394199 CA402973825 |
894 | E>V | No |
ClinGen Ensembl |
|
|
CA402973843 rs575414439 |
895 | T>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9030956 rs575414439 |
895 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201960720 CA9030957 |
898 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs137857882 CA9030959 |
899 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs137857882 CA402973913 |
899 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 900 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402974964 rs762900281 |
902 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030984 rs762900281 |
902 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402974958 rs1402900242 |
902 | G>S | No |
ClinGen gnomAD |
|
|
rs1486515961 CA402974998 |
904 | E>* | No |
ClinGen gnomAD |
|
|
rs1204882987 CA402975003 |
904 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA9030986 rs751378096 |
905 | V>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9030985 rs763962722 |
905 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA303982029 rs898726271 |
906 | E>D | No |
ClinGen Ensembl |
|
|
rs1599463771 CA402975057 |
907 | Q>E | No |
ClinGen Ensembl |
|
|
rs74549450 CA9030990 |
907 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1385245834 CA402975083 |
908 | Q>* | No |
ClinGen gnomAD |
|
|
CA402975101 rs1568394530 |
909 | Q>* | No |
ClinGen Ensembl |
|
|
CA402975119 rs1374866764 |
909 | Q>H | No |
ClinGen gnomAD |
|
|
CA402975126 rs1443495612 |
910 | Q>* | No |
ClinGen gnomAD |
|
|
rs200925289 CA303982032 |
912 | Q>E | No |
ClinGen gnomAD |
|
|
CA402975191 rs1437021719 |
913 | D>N | No |
ClinGen TOPMed |
|
|
rs1351558820 CA402975218 |
914 | Q>* | No |
ClinGen TOPMed |
|
|
CA402975263 rs1454285744 |
915 | P>L | No |
ClinGen gnomAD |
|
|
CA402975240 rs1346891557 |
915 | P>T | No |
ClinGen gnomAD |
|
|
rs887232813 CA303982036 |
916 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1008725422 CA303982038 |
917 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA303982040 rs1041096973 |
918 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA9030993 VAR_079926 rs750024778 |
919 | E>D | found in a patient with autism spectrum disorder; unknown pathological significance [UniProt] | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
CA402975323 rs1226671963 |
919 | E>K | No |
ClinGen gnomAD |
|
|
rs755723427 CA9030994 |
920 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1318027657 CA402975337 |
920 | G>S | No |
ClinGen gnomAD |
|
|
rs1266585738 CA402975388 |
921 | W>C | No |
ClinGen gnomAD |
|
|
rs550629298 CA9030996 |
923 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402975427 rs1246794400 |
923 | R>Q | No |
ClinGen TOPMed |
|
|
CA9030995 rs550629298 |
923 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA402975452 rs1482763044 |
924 | A>E | No |
ClinGen gnomAD |
|
|
CA402975439 rs1243363060 |
924 | A>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 924 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402975476 rs1270440714 |
925 | R>C | No |
ClinGen TOPMed |
|
|
CA303982046 rs900530232 |
926 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA9030997 rs772720199 |
926 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1219363502 CA402975570 |
927 | A>P | No |
ClinGen TOPMed |
|
|
rs569006303 CA303982048 |
927 | A>V | No |
ClinGen 1000Genomes |
|
|
CA9030998 rs200419950 VAR_079927 |
928 | V>M | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs771184071 CA9031000 |
929 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs771184071 CA402975637 |
929 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA9031001 rs776953312 |
932 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9031002 rs759709104 |
932 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs1374192005 CA402975735 |
933 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1391258056 CA402975760 |
934 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA402975754 rs1391258056 |
934 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1287022184 CA402975787 |
935 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA303982058 rs548377039 |
939 | E>* | No |
ClinGen 1000Genomes |
|
|
CA402975923 rs1262957342 |
940 | P>L | No |
ClinGen gnomAD |
|
|
CA402975904 rs1176868934 |
940 | P>S | No |
ClinGen TOPMed |
|
|
CA402975928 rs1311231682 |
941 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA402975956 rs1234045790 |
942 | V>L | No |
ClinGen gnomAD |
|
|
rs1465768602 CA402976024 |
946 | P>S | No |
ClinGen TOPMed |
|
|
CA402976045 rs1180895994 |
947 | E>* | No |
ClinGen gnomAD |
|
| TCGA novel | 947 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1481398837 CA402976073 |
948 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA9031004 rs769956227 VAR_079928 |
948 | A>V | found in a patient with schizophrenia; unknown pathological significance [UniProt] | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
CA402976119 rs1294811085 |
949 | D>E | No |
ClinGen TOPMed |
|
|
CA303982065 rs1052301784 |
950 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
COSM3718032 CA402976142 rs1355130133 |
950 | A>V | Variant assessed as Somatic; 0.0 impact. liver [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1306332975 CA402976169 |
951 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs890936287 CA303982067 |
951 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1368738349 CA402976182 |
952 | A>G | No |
ClinGen TOPMed |
|
|
CA402976178 rs1467792065 |
952 | A>P | No |
ClinGen TOPMed |
|
|
CA402976183 rs1368738349 |
952 | A>V | No |
ClinGen TOPMed |
|
|
CA402976232 rs1168041216 |
954 | A>T | No |
ClinGen TOPMed |
|
|
rs1009412900 CA303982069 |
954 | A>V | No |
ClinGen TOPMed |
|
|
CA9031008 rs764089411 |
955 | A>G | No |
ClinGen ExAC |
|
|
rs762957426 CA9031007 |
955 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs967947887 CA303982073 |
957 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1217052331 CA402976326 |
959 | G>D | No |
ClinGen gnomAD |
|
|
CA303982077 rs1001217364 |
961 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs761719156 CA9031010 |
961 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402976364 rs1033330361 |
962 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA303982079 rs1033330361 |
962 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
CA402976380 rs1200102459 |
964 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1200102459 CA402976378 |
964 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
CA402976386 rs1245848928 |
964 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1245848928 CA402976381 |
964 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1339597801 CA402976394 |
965 | S>P | No |
ClinGen TOPMed |
|
|
rs1420492104 CA402976419 |
966 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
CA303982083 rs991893480 |
966 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA9031012 rs10417824 |
966 | Y>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1430556059 CA402976421 |
967 | G>S | No |
ClinGen TOPMed |
|
|
rs1429397770 CA402976438 |
968 | R>H | No |
ClinGen gnomAD |
|
|
rs753402342 CA402976452 |
969 | P>L | No |
ClinGen ExAC TOPMed |
|
|
rs753402342 CA9031015 |
969 | P>Q | No |
ClinGen ExAC TOPMed |
|
|
rs766067309 CA9031014 |
969 | P>T | No |
ClinGen ExAC |
|
|
rs1348701589 CA402976466 |
971 | A>T | No |
ClinGen gnomAD |
|
|
rs1599464456 CA402976488 |
972 | A>G | No |
ClinGen Ensembl |
|
|
rs1271178770 CA402976480 |
972 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA402976507 rs1227238025 |
974 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1227238025 CA402976508 |
974 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA9031019 rs778400426 |
975 | T>R | No |
ClinGen ExAC TOPMed |
|
|
CA402976530 rs1483123258 |
976 | G>R | No |
ClinGen TOPMed |
|
|
rs1294719776 CA402976541 |
977 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1294719776 CA402976544 |
977 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1039717256 CA303982097 |
978 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA402976547 rs1360982793 |
978 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA402976570 rs1449865841 |
979 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs757745000 CA9031022 |
980 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs757745000 CA9031023 |
980 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1449042289 CA402976585 |
981 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1186913639 CA402976594 |
981 | G>V | No |
ClinGen gnomAD |
|
|
CA303982102 rs145392111 |
982 | E>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9031024 rs145392111 |
982 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs770009379 CA9031025 |
983 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA402976658 rs1319333653 |
987 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA402976674 rs1388402484 |
988 | R>G | No |
ClinGen gnomAD |
|
|
CA402976687 rs1433816538 |
989 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1433816538 CA402976690 |
989 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA402976699 rs1318143176 |
990 | I>T | No |
ClinGen gnomAD |
|
|
CA402976711 rs1246068057 |
991 | E>A | No |
ClinGen gnomAD |
|
|
CA402976707 rs1472730869 |
991 | E>Q | No |
ClinGen TOPMed |
|
|
CA402976739 rs1568395046 |
993 | A>V | No |
ClinGen Ensembl |
|
|
CA402976758 rs1225418259 |
995 | E>G | No |
ClinGen gnomAD |
|
|
CA9031027 rs749432056 |
995 | E>K | No |
ClinGen ExAC TOPMed |
|
|
rs1464282100 CA402976769 |
996 | R>Q | No |
ClinGen gnomAD |
|
|
rs768703505 CA402976789 |
998 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA402976791 rs1337768337 |
998 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA9031028 rs768703505 |
998 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA402976815 rs1270276370 |
1000 | A>V | No |
ClinGen gnomAD |
|
|
CA402976822 rs1186903511 |
1001 | L>V | No |
ClinGen gnomAD |
|
|
CA9031030 rs761685025 |
1002 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs557021822 CA402976843 |
1003 | R>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA9031033 rs557021822 |
1003 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9031031 rs538688866 |
1003 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs753526630 CA9031035 |
1004 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs903705718 CA303982115 |
1004 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs753526630 CA402976845 |
1004 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764686181 CA9031037 |
1005 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs752203804 CA9031038 |
1005 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA9031041 rs10401245 |
1006 | Q>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed |
|
|
rs1444221669 CA402976870 CA402976871 |
1006 | Q>H | No |
ClinGen gnomAD |
|
|
CA402976860 rs10401245 |
1006 | Q>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed |
|
|
CA402976872 rs1288891770 |
1007 | L>I | No |
ClinGen gnomAD |
|
|
rs1321646791 CA402976896 |
1009 | A>V | No |
ClinGen TOPMed |
|
|
rs756460571 CA303982124 |
1012 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9031043 rs756460571 |
1012 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402976927 rs1324475348 |
1012 | G>R | No |
ClinGen gnomAD |
|
|
CA402976950 rs1254086494 |
1014 | S>C | No |
ClinGen gnomAD |
|
|
rs1439648991 CA402976953 |
1014 | S>N | No |
ClinGen gnomAD |
|
|
CA303982126 rs958381140 |
1015 | A>S | No |
ClinGen Ensembl |
|
|
CA402976981 rs1182696787 |
1016 | R>C | No |
ClinGen gnomAD |
|
|
CA9031045 rs542713078 |
1016 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9031044 rs542713078 |
1016 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs950464387 CA303982130 |
1017 | H>Q | No |
ClinGen TOPMed |
|
|
rs1471919657 CA402977037 |
1018 | R>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 1019 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs748196670 CA9031048 |
1020 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9031047 rs191196970 |
1020 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs773196134 CA402977088 |
1021 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA9031051 rs760603856 |
1021 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760603856 CA402977092 |
1021 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402977096 rs760603856 |
1021 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9031050 rs773196134 |
1021 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs776461994 CA9031053 |
1022 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA402977156 rs1407943641 |
1024 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs764888684 CA9031055 |
1025 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs764888684 CA402977171 |
1025 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs759286588 CA402977164 |
1025 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA9031054 rs759286588 |
1025 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA402977160 rs759286588 |
1025 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs764888684 CA9031056 |
1025 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA9031057 rs762521662 |
1026 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs767970672 CA402977203 |
1027 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767970672 CA9031058 |
1027 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs573396231 CA9031061 |
1028 | A>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs750911103 CA9031060 |
1028 | A>T | No |
ClinGen ExAC TOPMed |
|
|
CA9031063 rs780430082 |
1030 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA402977325 rs1382611991 |
1034 | P>S | No |
ClinGen gnomAD |
|
|
CA402977344 rs1381612734 |
1035 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA402977354 rs1369434454 |
1036 | S>T | No |
ClinGen gnomAD |
|
|
CA9031064 rs754149331 |
1036 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA402977379 rs1304892015 |
1037 | G>D | No |
ClinGen gnomAD |
|
|
CA9031067 rs540917137 |
1038 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA303982162 rs540917137 |
1038 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs772179586 CA402977409 |
1039 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs10401454 CA9031070 |
1039 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs10401454 CA402977414 |
1039 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs10401454 CA9031069 |
1039 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs772179586 CA9031068 |
1039 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1225297384 CA402977432 |
1040 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1340145754 CA402977428 |
1040 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1225297384 CA402977434 |
1040 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA402977423 rs1340145754 |
1040 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
CA402977449 rs1488461855 |
1041 | S>I | No |
ClinGen gnomAD |
|
|
rs1264322213 CA402977464 |
1042 | Q>* | No |
ClinGen gnomAD |
|
|
CA402977472 rs1448329814 |
1042 | Q>R | No |
ClinGen gnomAD |
|
|
CA303982172 rs754118985 |
1043 | E>D | No |
ClinGen Ensembl |
|
|
rs776582713 CA402977503 |
1044 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776582713 CA9031072 |
1044 | E>R | No |
ClinGen ExAC TOPMed gnomAD |
No associated diseases with O60391
Functions
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| anchoring junction | A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix. |
| neuronal cell body | The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites. |
| NMDA selective glutamate receptor complex | An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| postsynaptic membrane | A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane. |
8 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium channel activity | Enables the facilitated diffusion of a calcium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. |
| cation channel activity | Enables the energy-independent passage of cations across a lipid bilayer down a concentration gradient. |
| glycine binding | Binding to glycine, aminoethanoic acid. |
| ionotropic glutamate receptor activity | Catalysis of the transmembrane transfer of an ion by a channel that opens when glutamate has been bound by the channel complex or one of its constituent parts. |
| ligand-gated ion channel activity | Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts. |
| neurotransmitter binding | Binding to a neurotransmitter, any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell. |
| neurotransmitter receptor activity | Combining with a neurotransmitter and transmitting the signal to initiate a change in cell activity. |
| signaling receptor activity | Receiving a signal and transmitting it in the cell to initiate a change in cell activity. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| ionotropic glutamate receptor signaling pathway | The series of molecular signals initiated by glutamate binding to a glutamate receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex, and ending with the regulation of a downstream cellular process, e.g. transcription. |
| protein insertion into membrane | The process that results in the incorporation of a protein into a biological membrane. Incorporation in this context means having some part or covalently attached group that is inserted into the the hydrophobic region of one or both bilayers. |
| regulation of calcium ion transport | Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
11 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q12879 | GRIN2A | Glutamate receptor ionotropic, NMDA 2A | Homo sapiens (Human) | PR |
| Q91ZU9 | Grin3b | Glutamate receptor ionotropic, NMDA 3B | Mus musculus (Mouse) | PR |
| Q8VHN2 | Grin3b | Glutamate receptor ionotropic, NMDA 3B | Rattus norvegicus (Rat) | PR |
| Q9C8E7 | GLR3.3 | Glutamate receptor 3.3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SHV2 | GLR2.3 | Glutamate receptor 2.3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SHV1 | GLR2.2 | Glutamate receptor 2.2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O81078 | GLR2.9 | Glutamate receptor 2.9 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SDQ4 | GLR3.7 | Glutamate receptor 3.7 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q84W41 | GLR3.6 | Glutamate receptor 3.6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O81776 | GLR2.4 | Glutamate receptor 2.4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O04660 | GLR2.1 | Glutamate receptor 2.1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEFVRALWLG | LALALGPGSA | GGHPQPCGVL | ARLGGSVRLG | ALLPRAPLAR | ARARAALARA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ALAPRLPHNL | SLELVVAAPP | ARDPASLTRG | LCQALVPPGV | AALLAFPEAR | PELLQLHFLA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| AATETPVLSL | LRREARAPLG | APNPFHLQLH | WASPLETLLD | VLVAVLQAHA | WEDVGLALCR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TQDPGGLVAL | WTSRAGRPPQ | LVLDLSRRDT | GDAGLRARLA | PMAAPVGGEA | PVPAAVLLGC |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DIARARRVLE | AVPPGPHWLL | GTPLPPKALP | TAGLPPGLLA | LGEVARPPLE | AAIHDIVQLV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ARALGSAAQV | QPKRALLPAP | VNCGDLQPAG | PESPGRFLAR | FLANTSFQGR | TGPVWVTGSS |
| 370 | 380 | 390 | 400 | 410 | 420 |
| QVHMSRHFKV | WSLRRDPRGA | PAWATVGSWR | DGQLDLEPGG | ASARPPPPQG | AQVWPKLRVV |
| 430 | 440 | 450 | 460 | 470 | 480 |
| TLLEHPFVFA | RDPDEDGQCP | AGQLCLDPGT | NDSATLDALF | AALANGSAPR | ALRKCCYGYC |
| 490 | 500 | 510 | 520 | 530 | 540 |
| IDLLERLAED | TPFDFELYLV | GDGKYGALRD | GRWTGLVGDL | LAGRAHMAVT | SFSINSARSQ |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VVDFTSPFFS | TSLGIMVRAR | DTASPIGAFM | WPLHWSTWLG | VFAALHLTAL | FLTVYEWRSP |
| 610 | 620 | 630 | 640 | 650 | 660 |
| YGLTPRGRNR | STVFSYSSAL | NLCYAILFRR | TVSSKTPKCP | TGRLLMNLWA | IFCLLVLSSY |
| 670 | 680 | 690 | 700 | 710 | 720 |
| TANLAAVMVG | DKTFEELSGI | HDPKLHHPAQ | GFRFGTVWES | SAEAYIKKSF | PDMHAHMRRH |
| 730 | 740 | 750 | 760 | 770 | 780 |
| SAPTTPRGVA | MLTSDPPKLN | AFIMDKSLLD | YEVSIDADCK | LLTVGKPFAI | EGYGIGLPQN |
| 790 | 800 | 810 | 820 | 830 | 840 |
| SPLTSNLSEF | ISRYKSSGFI | DLLHDKWYKM | VPCGKRVFAV | TETLQMSIYH | FAGLFVLLCL |
| 850 | 860 | 870 | 880 | 890 | 900 |
| GLGSALLSSL | GEHAFFRLAL | PRIRKGSRLQ | YWLHTSQKIH | RALNTEPPEG | SKEETAEAEP |
| 910 | 920 | 930 | 940 | 950 | 960 |
| SGPEVEQQQQ | QQDQPTAPEG | WKRARRAVDK | ERRVRFLLEP | AVVVAPEADA | EAEAAPREGP |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| VWLCSYGRPP | AARPTGAPQP | GELQELERRI | EVARERLRQA | LVRRGQLLAQ | LGDSARHRPR |
| 1030 | 1040 | ||||
| RLLQARAAPA | EAPPHSGRPG | SQE |