Q9HC96
Gene name |
CAPN10 (KIAA1845) |
Protein name |
Calpain-10 |
Names |
Calcium-activated neutral proteinase 10, CANP 10 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:11132 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9HC96
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9HC96-F1 | Predicted | AlphaFoldDB |
644 variants for Q9HC96
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs371403663 CA2205480 RCV001265657 |
156 | A>T | Variant assessed as Somatic; 0.0 impact. Inborn genetic diseases [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1559425580 RCV001265658 |
287 | A>missing | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1418856936 CA351291043 |
2 | R>W | No |
ClinGen gnomAD |
|
|
rs1473867213 CA351291068 |
3 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1325306857 CA351291082 |
4 | G>D | No |
ClinGen TOPMed |
|
|
CA351291113 rs958871941 |
5 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs958871941 CA68121512 |
5 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1384341883 CA351291122 |
6 | G>D | No |
ClinGen gnomAD |
|
|
CA68121530 rs975605568 |
6 | G>S | No |
ClinGen TOPMed |
|
|
rs1300563570 CA351291173 |
8 | T>M | No |
ClinGen gnomAD |
|
|
CA68121553 rs971437230 |
9 | P>L | No |
ClinGen TOPMed |
|
|
CA351291230 rs1222811094 |
12 | E>G | No |
ClinGen TOPMed |
|
|
CA68121558 rs972507480 |
12 | E>K | No |
ClinGen gnomAD |
|
|
CA351291283 rs1246516258 |
15 | R>G | No |
ClinGen gnomAD |
|
|
CA351291289 rs1182919854 |
15 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1277328913 CA351291310 |
16 | D>H | No |
ClinGen gnomAD |
|
|
rs1277328913 CA351291304 |
16 | D>N | No |
ClinGen gnomAD |
|
|
rs1241275448 CA351291318 |
16 | D>V | No |
ClinGen gnomAD |
|
|
rs1349291223 CA351291339 |
18 | A>V | No |
ClinGen gnomAD |
|
|
rs1484613570 CA351291398 |
21 | A>D | No |
ClinGen gnomAD |
|
|
rs1288100891 CA351291387 |
21 | A>T | No |
ClinGen gnomAD |
|
|
CA351291412 rs1257956089 |
22 | A>S | No |
ClinGen gnomAD |
|
|
CA2205364 rs766195991 |
25 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA2205363 rs766195991 |
25 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs1363349305 CA351291506 |
26 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA351291499 rs1363349305 |
26 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1160489053 CA351291563 |
28 | C>Y | No |
ClinGen gnomAD |
|
| TCGA novel | 29 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351291643 rs1434581638 |
30 | L>F | No |
ClinGen gnomAD |
|
|
CA68121585 rs759171547 |
31 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205365 rs759171547 |
31 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205366 rs557342363 |
32 | T>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM3695384 COSM3695382 RCV000889461 COSM3695381 rs138005500 CA2205367 |
34 | L>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1326416291 CA351291736 |
35 | A>T | No |
ClinGen gnomAD |
|
|
rs1575443924 CA351291831 |
38 | R>G | No |
ClinGen Ensembl |
|
|
CA351291840 rs1398615637 |
38 | R>H | No |
ClinGen gnomAD |
|
| TCGA novel | 39 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA68121604 rs1044160399 |
40 | D>N | No |
ClinGen TOPMed |
|
|
CA351291901 rs1310742612 |
41 | I>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 42 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs905271434 CA68121607 |
42 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
rs905271434 CA351291922 |
42 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA351292008 rs1267221494 |
46 | P>S | No |
ClinGen TOPMed |
|
|
CA351292028 rs1346835552 |
47 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA351292017 rs1256409788 |
47 | Q>K | No |
ClinGen gnomAD |
|
|
rs948039711 CA68122778 |
48 | E>K | No |
ClinGen Ensembl |
|
|
CA351292593 rs1427201539 |
49 | I>V | No |
ClinGen gnomAD |
|
|
CA2205382 rs142471367 |
50 | C>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs771126731 CA2205385 |
54 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205384 rs764730986 |
54 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA351292641 rs139462940 |
57 | P>S | No |
ClinGen ESP TOPMed |
|
|
rs139462940 CA68122801 |
57 | P>T | No |
ClinGen ESP TOPMed |
|
|
rs751154296 CA2205388 |
61 | R>Q | No |
ClinGen ExAC |
|
|
rs763690414 CA2205387 |
61 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205389 rs756667300 |
63 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs767047251 CA2205390 |
64 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA351292687 rs1369654441 |
64 | Q>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA351292692 rs1293545109 |
65 | V>E | No |
ClinGen TOPMed |
|
|
rs754246897 CA2205391 |
65 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA351292711 rs1340863138 |
68 | G>R | No |
ClinGen gnomAD |
|
|
rs1575445514 CA351292737 |
72 | D>G | No |
ClinGen Ensembl |
|
|
rs1222403710 CA351292734 |
72 | D>Y | No |
ClinGen gnomAD |
|
|
rs1005767229 CA68122817 |
73 | C>G | No |
ClinGen Ensembl |
|
| TCGA novel | 73 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778941616 CA2205393 |
74 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA351292767 rs1485217567 |
76 | L>P | No |
ClinGen gnomAD |
|
|
CA68122826 rs1038103693 |
77 | C>Y | No |
ClinGen Ensembl |
|
|
rs777811694 CA2205397 |
80 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777811694 CA2205396 |
80 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351292793 rs1422649684 |
80 | A>V | No |
ClinGen TOPMed |
|
|
rs781112808 CA2205399 |
81 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1018735 COSM1018734 COSM1591989 rs745593937 CA2205400 |
81 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA351292807 rs1233582226 |
83 | Q>R | No |
ClinGen Ensembl |
|
|
CA351292815 rs1559423128 |
84 | K>R | No |
ClinGen Ensembl |
|
|
CA351292834 rs1232105849 |
87 | H>N | No |
ClinGen TOPMed gnomAD |
|
|
CA351292835 rs1232105849 |
87 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA351292844 rs1276626242 |
88 | L>F | No |
ClinGen TOPMed |
|
|
rs773980754 CA2205405 |
89 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA2205407 rs766922732 |
90 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs761473089 CA2205406 |
90 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205408 rs762035846 |
91 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs756062111 CA2205441 |
92 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA351294042 rs1485389464 |
93 | I>V | No |
ClinGen TOPMed |
|
|
rs141615023 CA2205442 |
95 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs961748012 CA68124008 |
96 | G>E | No |
ClinGen TOPMed |
|
|
CA68124012 rs904376200 |
98 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA351294166 rs904376200 |
98 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA68124022 rs374645877 |
99 | S>N | No |
ClinGen ESP gnomAD |
|
|
CA351294221 rs1414640067 |
100 | W>* | No |
ClinGen TOPMed |
|
|
CA2205445 rs778658220 |
101 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs959809930 CA351294264 |
102 | D>H | No |
ClinGen gnomAD |
|
|
CA68124108 rs959809930 |
102 | D>N | No |
ClinGen gnomAD |
|
|
rs771900528 CA351294391 |
106 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771900528 CA2205447 |
106 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205446 rs747774253 |
106 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351294406 rs1398803388 |
107 | G>V | No |
ClinGen TOPMed |
|
|
rs1246062946 CA351294462 |
110 | T>I | No |
ClinGen gnomAD |
|
|
CA2205448 rs772766088 |
111 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA2205449 rs746568341 |
112 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1660973 COSM1660972 CA2205450 rs770272925 |
112 | R>H | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA2205451 rs775879249 |
113 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1026537146 CA68124141 |
115 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA351294689 rs1322895178 |
118 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs368742220 CA2205453 |
118 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 121 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2205454 rs774735344 |
122 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA351294790 rs774735344 |
122 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA2205455 rs761996845 |
124 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1340273824 CA351294818 |
124 | T>R | No |
ClinGen gnomAD |
|
|
CA351294850 rs1575446711 |
125 | D>E | No |
ClinGen Ensembl |
|
|
CA351294866 rs1575446716 |
126 | D>A | No |
ClinGen Ensembl |
|
|
rs750507423 CA2205457 |
127 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205458 rs750507423 |
127 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205459 rs766281286 |
127 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs778830196 CA2205462 |
129 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA68124165 rs112471054 |
129 | P>S | No |
ClinGen Ensembl |
|
|
rs1223629747 CA351294988 |
130 | C>Y | No |
ClinGen gnomAD |
|
|
rs748016007 CA2205463 |
132 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs777295496 CA2205467 |
136 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 136 | C>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA68124205 rs911328960 |
138 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA351295222 rs911328960 |
138 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA2205469 rs151024127 |
139 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA351295239 rs151024127 |
139 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2205470 rs770374333 |
139 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1287928778 CA351295263 |
140 | C>R | No |
ClinGen TOPMed |
|
|
CA351295276 rs1428147347 |
140 | C>Y | No |
ClinGen TOPMed |
|
|
rs1278542531 CA351295310 |
142 | R>G | No |
ClinGen Ensembl |
|
|
CA351295314 rs1316872862 |
142 | R>K | No |
ClinGen gnomAD |
|
|
rs1316872862 CA351295318 |
142 | R>M | No |
ClinGen gnomAD |
|
|
rs749761334 CA68124233 |
143 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1460703041 CA351295430 |
145 | V>M | No |
ClinGen TOPMed |
|
|
rs1400998267 CA351295463 |
146 | F>S | No |
ClinGen gnomAD |
|
|
rs913218672 CA68124244 |
148 | L>F | No |
ClinGen TOPMed |
|
|
CA2205475 rs774681980 |
149 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205476 rs774681980 |
149 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 151 | L>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1283132066 CA351295655 |
153 | K>E | No |
ClinGen gnomAD |
|
|
rs575042303 CA68124284 |
154 | V>D | No |
ClinGen Ensembl |
|
|
rs371403663 CA2205481 |
156 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA351295795 rs1253830984 |
157 | K>R | No |
ClinGen TOPMed |
|
|
rs1415807482 CA351295957 |
158 | V>F | No |
ClinGen gnomAD |
|
|
CA2205505 rs368964748 |
159 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1269107417 CA351295984 |
161 | S>F | No |
ClinGen gnomAD |
|
|
rs140653709 CA2205508 |
162 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2205509 rs749864876 |
163 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1494858 COSM1494857 CA68125180 rs867854825 |
167 | A>V | kidney Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA2205511 rs779342230 |
168 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA2205512 rs748683595 |
169 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA351296078 rs1303833445 |
170 | V>A | No |
ClinGen TOPMed |
|
|
CA351296076 rs1458286829 |
170 | V>L | No |
ClinGen gnomAD |
|
|
rs1180541746 CA351296088 |
171 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1388514127 CA351296102 |
172 | D>E | No |
ClinGen TOPMed |
|
|
rs569236143 CA2205514 |
172 | D>H | No |
ClinGen 1000Genomes ExAC |
|
|
rs530827882 CA2205515 |
172 | D>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs759644421 CA2205518 |
175 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA68125221 rs1051588191 |
176 | D>N | No |
ClinGen TOPMed |
|
|
rs1167004896 CA351296176 |
178 | T>S | No |
ClinGen TOPMed |
|
|
COSM3939012 CA2205520 COSM3939011 rs139668112 |
179 | G>S | oesophagus [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA68125242 rs1010081589 |
180 | G>A | No |
ClinGen TOPMed |
|
|
CA2205522 rs764148287 |
180 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351296211 rs1386141308 |
182 | A>T | No |
ClinGen gnomAD |
|
|
rs141175141 CA2205524 |
184 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1001147367 CA68125286 |
186 | N>K | No |
ClinGen TOPMed |
|
|
rs1332587158 CA351296310 |
188 | K>R | No |
ClinGen gnomAD |
|
|
CA2205527 rs755580920 |
189 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1349635180 CA351296337 |
190 | V>A | No |
ClinGen TOPMed |
|
|
rs753436095 CA2205529 |
190 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351296345 rs1280534206 |
191 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA351296372 rs1488478204 |
193 | S>N | No |
ClinGen gnomAD |
|
|
rs747279835 CA2205532 |
194 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374908348 CA2205531 |
194 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1193315741 CA351296394 |
195 | G>S | No |
ClinGen gnomAD |
|
|
rs1422489553 CA351296414 |
196 | Q>* | No |
ClinGen gnomAD |
|
|
rs546950747 CA68125338 |
197 | Q>* | No |
ClinGen Ensembl |
|
|
rs757719497 CA2205533 |
198 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205534 rs781528296 |
199 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1172281603 CA351296478 |
199 | R>W | No |
ClinGen gnomAD |
|
| TCGA novel | 200 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351296494 rs3792268 |
200 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV000901222 CA2205535 VAR_014437 rs3792268 |
200 | P>T | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1306295257 CA351296510 |
201 | G>A | No |
ClinGen TOPMed |
|
|
rs775701945 CA2205537 |
202 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775701945 CA2205538 |
202 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
VAR_014438 CA2205539 rs768407925 |
202 | R>H | No |
ClinGen UniProt ExAC dbSNP gnomAD |
|
|
CA351296523 rs768407925 |
202 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA351296514 rs775701945 |
202 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1297287607 CA351296532 |
203 | W>G | No |
ClinGen gnomAD |
|
|
CA351296543 rs1341421059 |
204 | E>K | No |
ClinGen gnomAD |
|
|
rs951725011 CA68125370 |
205 | H>D | No |
ClinGen TOPMed |
|
|
rs1172143497 CA351296560 |
205 | H>P | No |
ClinGen TOPMed |
|
|
rs774356046 CA2205540 |
206 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205542 rs767331086 |
209 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149999733 CA2205541 |
209 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA351296662 rs1472531260 |
212 | L>F | No |
ClinGen TOPMed |
|
|
CA351296684 rs766089057 |
213 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1264345141 CA351296680 |
213 | H>R | No |
ClinGen gnomAD |
|
|
rs760297900 CA2205544 |
213 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs568167481 CA351296695 |
214 | L>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs568167481 CA2205546 |
214 | L>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1422764192 CA351296705 |
215 | K>Q | No |
ClinGen gnomAD |
|
|
CA68125444 rs964075273 |
217 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA2205548 rs764459834 |
217 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs369247221 CA2205549 |
218 | C>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA351296790 rs1157896289 |
219 | L>P | No |
ClinGen gnomAD |
|
|
rs903404123 CA68125450 |
221 | S>T | No |
ClinGen TOPMed |
|
|
rs1000401527 CA351296850 |
222 | C>F | No |
ClinGen gnomAD |
|
|
rs1000401527 CA68125452 |
222 | C>Y | No |
ClinGen gnomAD |
|
|
CA68125461 rs934068237 |
224 | V>E | No |
ClinGen TOPMed |
|
|
rs374005255 CA2205551 |
224 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1396691385 CA351296924 |
225 | L>P | No |
ClinGen gnomAD |
|
|
rs1281552801 CA351296935 |
226 | S>G | No |
ClinGen gnomAD |
|
|
CA351296952 rs1286320742 |
226 | S>R | No |
ClinGen TOPMed |
|
|
rs746295304 CA2205552 |
227 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205581 rs201697135 |
232 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs148716964 CA2205580 |
232 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1446544309 CA351298115 |
233 | E>K | No |
ClinGen TOPMed |
|
|
CA351298166 rs1208862333 |
235 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1477608764 CA351298157 |
235 | G>R | No |
ClinGen gnomAD |
|
|
CA351298172 rs1208862333 |
235 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA68129415 rs796689943 |
236 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
CA2205584 rs769393197 |
236 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351298259 rs1559425245 |
238 | H>L | No |
ClinGen Ensembl |
|
|
rs201800700 CA2205587 |
238 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs750985071 CA2205588 |
239 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1258715664 CA351298345 |
241 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA2205589 rs761078239 |
241 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs776379324 CA2205590 |
243 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1575449198 CA351298498 |
244 | D>A | No |
ClinGen Ensembl |
|
|
rs1278334046 CA351298506 |
244 | D>E | No |
ClinGen gnomAD |
|
|
rs1315628228 CA351298484 |
244 | D>N | No |
ClinGen TOPMed |
|
|
CA2205594 rs779070069 |
246 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA2205593 rs779070069 |
246 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM210607 rs372639976 CA2205592 |
246 | R>W | large_intestine Variant assessed as Somatic; 4.631e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1322198587 CA351298582 |
248 | L>F | No |
ClinGen gnomAD |
|
|
rs769690789 CA68129456 |
249 | Q>K | No |
ClinGen Ensembl |
|
| TCGA novel | 251 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA68129463 rs548715768 |
251 | Q>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2205596 rs548715768 |
251 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA351298748 rs770826232 |
252 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205598 rs770826232 |
252 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351298752 rs1244009062 |
253 | G>S | No |
ClinGen gnomAD |
|
|
CA351298791 rs1471868385 |
255 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
CA351298883 rs1371206992 |
259 | L>P | No |
ClinGen TOPMed |
|
|
CA2205601 rs201991603 |
260 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA68129508 rs745718891 |
260 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1220506803 CA351298930 |
261 | I>N | No |
ClinGen TOPMed |
|
|
rs1360265716 CA351298958 |
262 | Q>R | No |
ClinGen gnomAD |
|
|
rs1274186175 CA351299009 |
264 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA351298994 rs1559425310 |
264 | P>T | No |
ClinGen Ensembl |
|
|
CA351299077 rs748756122 |
267 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205604 rs748756122 |
267 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205603 rs775291536 |
267 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205606 rs774043486 |
268 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768308971 CA2205605 |
268 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA351299121 rs1345573589 |
269 | C>F | No |
ClinGen TOPMed |
|
|
rs1283677579 CA351299147 |
270 | W>C | No |
ClinGen gnomAD |
|
|
CA351299140 rs1248035804 |
270 | W>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 273 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2205608 rs766851924 |
274 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA2205609 rs777047316 |
274 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs1440851531 CA351299223 |
275 | R>G | No |
ClinGen gnomAD |
|
|
CA2205612 CA2205611 rs150113284 |
276 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| VAR_036049 | 276 | E>G | a colorectal cancer sample; somatic mutation [UniProt] | No | UniProt |
|
rs1037829546 CA68129592 |
276 | E>K | No |
ClinGen TOPMed |
|
|
rs758660700 CA2205613 |
277 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1409083560 CA351299249 |
277 | G>R | No |
ClinGen TOPMed |
|
|
rs370216116 CA2205636 |
278 | G>D | No |
ClinGen ESP ExAC gnomAD |
|
|
rs757301434 CA2205637 |
279 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1265822134 CA351300469 |
282 | S>N | No |
ClinGen gnomAD |
|
|
CA2205639 rs767436231 |
282 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351300497 rs1268289764 |
283 | Q>* | No |
ClinGen gnomAD |
|
| TCGA novel | 283 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2205640 rs756114074 |
283 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs779969947 CA2205641 |
284 | V>I | No |
ClinGen ExAC gnomAD |
|
|
COSM1406833 CA2205642 COSM1406832 rs149240512 |
287 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs778711640 CA2205644 |
289 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs137930786 CA68130064 |
290 | S>C | No |
ClinGen ESP gnomAD |
|
|
CA2205646 rs144696781 |
291 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs147221444 CA2205645 |
291 | E>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA351300764 rs1303523533 |
292 | L>H | No |
ClinGen gnomAD |
|
|
CA2205647 rs777385683 |
292 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1277697787 CA351300829 |
294 | S>F | No |
ClinGen gnomAD |
|
|
CA351300835 rs1229648669 |
295 | Q>* | No |
ClinGen gnomAD |
|
|
CA68130089 rs1034936226 |
296 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA351300973 rs1203186202 |
298 | E>G | No |
ClinGen TOPMed |
|
|
CA351300991 rs1321478770 |
299 | G>R | No |
ClinGen TOPMed |
|
|
CA351301036 rs1262758956 |
301 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA351301061 rs1240071563 |
302 | W>G | No |
ClinGen TOPMed |
|
|
rs746339773 CA2205648 |
303 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs200757356 CA68130125 |
304 | E>D | No |
ClinGen 1000Genomes gnomAD |
|
|
rs560961041 CA2205649 |
305 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA351301171 rs1372121584 |
306 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 306 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1410064599 CA351301177 |
306 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
CA351301248 rs1428600146 |
310 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs545243469 CA351301273 |
311 | E>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA2205652 rs768811919 |
311 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs545243469 CA2205651 |
311 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2205653 rs774455277 |
312 | F>S | No |
ClinGen ExAC |
|
|
CA351301313 rs761909084 |
313 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205656 rs377500913 |
314 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2205655 rs377500913 |
314 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA351301349 rs1367176965 |
316 | T>A | No |
ClinGen gnomAD |
|
|
CA2205658 rs766488505 |
317 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs140681762 CA2205661 RCV000905037 |
320 | P>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs974232184 CA68130169 |
321 | V>L | No |
ClinGen Ensembl |
|
|
rs932342960 CA68130175 |
322 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1352000053 CA351301541 CA351301542 |
323 | E>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA351301552 rs746599972 |
324 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205666 rs746599972 |
324 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205667 rs146771809 |
325 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs769036578 CA2205670 |
327 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA2205671 rs774815355 |
329 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs1158033383 | 332 | T>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2205672 rs536446683 |
332 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs536446683 CA351301770 |
332 | T>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs749991487 CA2205703 |
336 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs766987590 CA2205702 |
336 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs755432883 CA2205704 |
337 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205705 rs779477564 |
338 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205706 rs748401959 |
339 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA351302105 rs747212701 |
340 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205710 rs200682095 |
340 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs747212701 COSM1018746 CA2205709 COSM1018747 |
340 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1028142113 CA68130732 |
341 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
VAR_014439 CA2205711 rs776848131 |
341 | A>V | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
|
rs182758984 CA2205713 |
343 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1575450302 CA351302157 |
343 | P>T | No |
ClinGen Ensembl |
|
|
rs1284705998 CA351302172 |
344 | G>R | No |
ClinGen gnomAD |
|
|
rs775523476 CA2205714 |
345 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA351302210 rs1367880872 |
346 | W>* | No |
ClinGen TOPMed |
|
|
CA351302203 rs1418293274 |
346 | W>S | No |
ClinGen TOPMed |
|
|
CA2205715 rs371277139 |
347 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2205717 rs374988590 |
348 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1219187442 CA351302237 |
348 | K>R | No |
ClinGen gnomAD |
|
|
rs761439895 CA2205718 |
353 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351302350 rs1201884119 |
355 | C>Y | No |
ClinGen gnomAD |
|
|
rs371934367 CA351302364 |
356 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371934367 CA2205720 |
356 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2205719 rs369150928 |
356 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA68130818 rs867237291 |
357 | N>K | No |
ClinGen gnomAD |
|
|
CA2205721 rs755661251 |
359 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA2205723 rs202008025 |
360 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA351302408 rs1344097593 |
363 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA2205725 rs151304022 |
363 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2205726 rs752039061 |
364 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs914181233 CA68130873 |
366 | K>E | No |
ClinGen Ensembl |
|
|
CA351302432 rs1277596265 |
366 | K>R | No |
ClinGen TOPMed |
|
|
rs1364035345 CA351302469 |
368 | W>C | No |
ClinGen gnomAD |
|
|
rs368852606 CA2205728 |
370 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs757489978 CA2205727 |
370 | R>W | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1359920850 CA351302488 |
371 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA351302506 rs1321943001 |
372 | S>* | No |
ClinGen gnomAD |
|
|
rs188932271 CA2205729 |
374 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2205732 rs201702916 |
377 | V>A | No |
ClinGen 1000Genomes ExAC |
|
|
CA351302602 rs1243889531 |
379 | I>S | No |
ClinGen gnomAD |
|
|
rs768530567 CA2205733 |
379 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351302623 rs1313782889 |
381 | V>A | No |
ClinGen gnomAD |
|
|
CA2205735 rs761598065 |
381 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs552159586 CA68130928 |
382 | L>R | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1446834881 CA351302630 |
382 | L>V | No |
ClinGen gnomAD |
|
|
rs1270589701 CA351302645 |
383 | Q>R | No |
ClinGen TOPMed |
|
|
CA351302661 rs1382413472 |
384 | R>K | No |
ClinGen gnomAD |
|
|
CA351302677 rs1318460703 |
385 | S>F | No |
ClinGen gnomAD |
|
|
rs772872543 CA2205737 |
385 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs765891497 CA2205739 |
386 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs200622375 CA351302713 |
388 | H>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs764704125 CA2205742 |
389 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs11556468 CA2205743 |
389 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA351302723 rs1224521966 |
390 | A>T | No |
ClinGen gnomAD |
|
|
rs372834728 CA2205745 |
390 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA351302737 rs1465317480 |
391 | D>G | No |
ClinGen gnomAD |
|
|
CA351302734 rs1203044068 |
391 | D>Y | No |
ClinGen gnomAD |
|
|
CA351302743 rs1244355483 |
392 | W>* | No |
ClinGen gnomAD |
|
|
CA68130984 rs940064313 |
393 | A>G | No |
ClinGen gnomAD |
|
|
rs780165677 CA2205748 |
395 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138959181 CA2205747 |
395 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1575450504 CA351302765 |
396 | A>T | No |
ClinGen Ensembl |
|
| TCGA novel | 397 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778834356 CA2205751 |
397 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs370726283 CA2205750 |
397 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2205752 rs747887998 |
398 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1365891575 CA351302836 CA351302838 |
402 | D>E | No |
ClinGen TOPMed |
|
|
rs200186797 CA2205754 |
404 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1281496903 CA351302911 |
405 | T>I | No |
ClinGen gnomAD |
|
|
CA2205755 rs760362038 |
406 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA351302955 rs1326339230 |
407 | W>C | No |
ClinGen gnomAD |
|
|
rs867460893 CA68131048 |
409 | P>L | No |
ClinGen Ensembl |
|
|
rs144532292 CA68131049 |
410 | A>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA2205757 rs776140775 |
410 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs889625559 CA68131051 |
412 | I>V | No |
ClinGen TOPMed |
|
|
CA2205759 rs764648885 |
413 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762453865 CA2205761 |
414 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA351303200 rs1175141018 |
415 | K>E | No |
ClinGen gnomAD |
|
|
CA2205762 rs767975777 |
415 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs750807609 CA2205763 |
418 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
rs750807609 CA351303304 |
418 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 419 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 419 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs756351129 CA2205764 |
420 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs766511704 CA2205765 |
423 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1330633334 CA351303437 |
424 | L>F | No |
ClinGen gnomAD |
|
|
CA351304032 rs1436645304 |
427 | V>I | No |
ClinGen gnomAD |
|
|
rs755756511 CA2205814 |
429 | K>* | No |
ClinGen ExAC gnomAD |
|
|
CA2205815 rs755756511 |
429 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs768080984 CA2205817 |
430 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748756061 CA2205816 |
430 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA2205819 rs201807668 |
431 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs369837274 CA2205818 |
431 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200003517 CA2205820 |
432 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1020715828 CA68132219 |
432 | V>L | No |
ClinGen gnomAD |
|
|
rs759907402 CA2205822 |
433 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA2205821 rs776914728 |
433 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs980412388 CA68132238 |
435 | P>L | No |
ClinGen TOPMed |
|
| TCGA novel | 435 | P>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351304238 rs1391354688 |
436 | R>G | No |
ClinGen TOPMed |
|
|
CA2205823 rs769954158 |
437 | V>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 438 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2205825 rs763272807 |
439 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA351305493 rs1389957124 |
440 | M>I | No |
ClinGen gnomAD |
|
|
rs1194748925 CA351305473 |
440 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA351305476 rs1194748925 |
440 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs758832246 CA2205829 |
443 | V>M | No |
ClinGen ExAC gnomAD |
|
| rs777656879 | 443 | V>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1367252467 CA351305659 |
446 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA2205832 rs375653976 |
447 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2205833 rs2975765 |
447 | A>V | Variant assessed as Somatic; 9.281e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA351305702 rs373123426 |
448 | C>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2205835 rs754709387 |
448 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs930006352 CA68132318 |
451 | Y>C | No |
ClinGen TOPMed |
|
|
CA351305768 rs1351631279 |
451 | Y>H | No |
ClinGen gnomAD |
|
|
CA351305802 rs1048029128 |
453 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA68132338 rs1048029128 |
453 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA2205838 rs771284091 |
453 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1244107095 CA351305804 |
454 | E>K | No |
ClinGen gnomAD |
|
|
CA2205839 rs781679015 |
456 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA2205841 rs374143083 |
458 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA2205842 rs752063033 |
458 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs184439941 RCV000893187 CA2205843 |
460 | E>K | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1559426798 CA351306019 |
462 | S>L | No |
ClinGen Ensembl |
|
|
rs774232664 CA2205845 |
463 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351306031 rs1300462390 |
463 | P>T | No |
ClinGen TOPMed |
|
|
rs767517219 CA2205847 |
464 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs773316366 CA2205848 |
465 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA351306142 rs1350218412 |
466 | Y>D | No |
ClinGen gnomAD |
|
|
CA351306146 rs1241967884 |
466 | Y>S | No |
ClinGen Ensembl |
|
|
rs760736608 CA2205849 |
470 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs766256299 CA2205850 |
473 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs114535069 CA2205851 RCV000963117 |
474 | L>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA351306519 rs1051351442 |
477 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
RCV000958636 rs148303768 CA2205853 |
477 | A>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1051351442 CA68132465 |
477 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1559426852 CA351306555 |
478 | P>L | No |
ClinGen Ensembl |
|
|
CA351306590 rs1190954889 |
480 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA351306629 rs756668839 |
481 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs904726596 CA68132558 |
483 | L>I | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 484 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201984748 CA2205860 |
484 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA351306834 rs1161612134 |
487 | S>F | No |
ClinGen gnomAD |
|
|
rs768706621 CA2205861 |
488 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA351306869 rs1416225306 |
488 | T>I | No |
ClinGen gnomAD |
|
|
CA351306938 rs1310166568 |
489 | G>A | No |
ClinGen TOPMed |
|
|
rs534379076 CA2205863 |
489 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA351306945 rs1410643847 |
490 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA351306946 rs752192395 |
490 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752192395 CA2205864 |
490 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA68132589 rs538913310 |
492 | S>F | No |
ClinGen gnomAD |
|
|
rs200700918 CA68132596 |
494 | S>T | No |
ClinGen Ensembl |
|
|
CA2205887 rs759430755 |
495 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs769607366 CA2205888 |
496 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1463961288 CA351307367 |
498 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1393004954 CA351307380 |
498 | A>V | No |
ClinGen gnomAD |
|
|
rs1263580929 CA351307405 |
499 | V>G | No |
ClinGen TOPMed |
|
|
CA68132823 rs945698867 |
500 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA2205889 rs201527381 |
500 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201527381 CA351307411 |
500 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA68132828 rs1042843275 |
502 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
CA351307510 rs1228962407 |
503 | T>A | No |
ClinGen TOPMed |
|
|
rs7607759 VAR_014440 CA2205890 |
504 | T>A | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs7607759 CA351307571 |
504 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2205891 rs763737919 |
505 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351307621 rs1559427006 |
505 | P>H | No |
ClinGen Ensembl |
|
|
COSM720908 CA2205892 rs763737919 |
505 | P>S | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA351307600 rs763737919 |
505 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351307639 rs369630719 CA2205894 |
506 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2205896 rs755489917 |
507 | A>E | No |
ClinGen ExAC |
|
|
CA68132869 rs540417767 |
510 | P>L | No |
ClinGen 1000Genomes TOPMed |
|
|
rs200361959 CA2205898 |
511 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1465266713 CA351307807 |
511 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA351307845 rs1241063091 |
512 | G>E | No |
ClinGen gnomAD |
|
|
CA351307895 rs1422984276 |
513 | E>K | No |
ClinGen gnomAD |
|
|
rs771103112 CA2205902 |
514 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs1559427033 CA351307965 |
515 | G>A | No |
ClinGen Ensembl |
|
|
rs1451794210 CA351308002 |
516 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs778761844 CA2205905 |
517 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529342399 CA2205906 |
518 | Q>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA68132930 rs951438183 |
519 | L>P | No |
ClinGen TOPMed |
|
|
rs762746164 CA2205908 |
520 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205907 rs775284291 |
520 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1396909915 CA351308101 |
521 | G>S | No |
ClinGen gnomAD |
|
|
CA351308167 rs1313058230 |
523 | W>* | No |
ClinGen gnomAD |
|
|
rs550974583 CA68132953 |
523 | W>R | No |
ClinGen 1000Genomes |
|
|
CA2205909 rs768253140 |
524 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205910 COSM1199509 rs376990183 |
526 | G>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA2205911 rs761495953 |
527 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767033655 CA2205912 |
528 | T>M | No |
ClinGen ExAC gnomAD |
|
| VAR_014441 | 529 | A>S | No | UniProt | |
|
rs1213163166 CA351308251 |
529 | A>V | No |
ClinGen TOPMed |
|
|
CA351308279 rs1355745708 |
530 | G>A | No |
ClinGen gnomAD |
|
|
rs1355745708 CA351308289 |
530 | G>V | No |
ClinGen gnomAD |
|
| TCGA novel | 531 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2205916 rs765667275 |
531 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351308303 rs1182221065 |
531 | G>D | No |
ClinGen TOPMed gnomAD |
|
| rs779173614 | 532 | S>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351308342 rs1258615129 |
532 | S>R | No |
ClinGen gnomAD |
|
|
rs753054948 CA2205917 |
533 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA351308424 rs1412827692 |
534 | N>K | No |
ClinGen gnomAD |
|
|
rs1323243797 CA351308484 |
537 | S>L | No |
ClinGen TOPMed |
|
|
rs751806987 CA2205920 |
538 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351308508 rs1575452164 |
538 | Y>S | No |
ClinGen Ensembl |
|
|
CA351308523 rs1169557266 |
539 | P>T | No |
ClinGen TOPMed |
|
|
CA351308539 rs1575452173 |
540 | T>P | No |
ClinGen Ensembl |
|
|
rs377630733 CA351308801 |
547 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377630733 CA2205922 |
547 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs779874859 CA2205925 |
550 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205926 rs779874859 |
550 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351308990 rs1229636078 |
553 | G>S | No |
ClinGen gnomAD |
|
|
rs945747188 CA351309025 |
554 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA351309038 rs1249721523 |
554 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA351309048 rs1249721523 |
554 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs945747188 CA68133075 |
554 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
RCV000904559 rs201157354 CA2205928 |
555 | R>C | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA351309092 rs1210609015 |
555 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs747787989 CA2205929 |
556 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747049929 CA2205930 |
557 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA2205933 rs772712964 |
558 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205934 rs372211070 |
558 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2205935 rs765727689 |
559 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377105313 CA2205936 |
560 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205937 rs763603614 |
560 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA68133094 rs368540468 |
561 | L>P | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA351309439 rs1055546242 |
564 | H>P | No |
ClinGen TOPMed gnomAD |
|
|
CA68133096 rs1055546242 |
564 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs147491275 CA2205939 |
565 | C>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs200753424 CA68133119 |
566 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200753424 CA2205941 |
566 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757430028 CA2205940 COSM418794 |
566 | R>W | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA2205946 rs567799333 |
571 | E>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2205945 rs367830435 |
571 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1575452278 CA351309764 |
573 | H>P | No |
ClinGen Ensembl |
|
|
rs1026524252 CA68133176 |
573 | H>Y | No |
ClinGen Ensembl |
|
|
CA351309779 rs1175724176 |
574 | P>A | No |
ClinGen TOPMed |
|
|
rs1484326383 COSM720906 CA351309793 |
574 | P>L | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1175724176 CA351309782 |
574 | P>S | No |
ClinGen TOPMed |
|
|
rs747902580 CA2205948 |
575 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371662692 CA2205950 |
576 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2205951 rs746714617 |
577 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA2205952 rs770325392 |
578 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763548963 CA2205954 |
580 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs776336512 CA2205953 |
580 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA2205970 RCV000909359 rs114120181 |
582 | V>A | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA351310163 rs1321090847 |
582 | V>I | No |
ClinGen gnomAD |
|
|
CA351310195 rs1283882504 |
583 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 584 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs894352572 CA68134243 |
585 | G>V | No |
ClinGen TOPMed |
|
| TCGA novel | 587 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 587 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA68134244 rs369756768 |
588 | S>R | No |
ClinGen ESP gnomAD |
|
|
CA68134260 rs983525655 |
589 | Q>R | No |
ClinGen Ensembl |
|
|
rs780781756 CA2205972 |
590 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1282218796 CA351310317 |
590 | D>Y | No |
ClinGen gnomAD |
|
|
CA68134277 rs909222854 |
591 | A>T | No |
ClinGen gnomAD |
|
|
rs1460275142 CA351310347 |
591 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA351310352 rs372925946 |
592 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372925946 CA2205974 |
592 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2205976 rs762425976 |
593 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762425976 CA2205977 |
593 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351310383 rs762425976 |
593 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351310377 rs1318555203 |
593 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs760805653 CA2205979 |
594 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA2205982 rs759635598 |
599 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1171740931 CA351310490 |
599 | P>S | No |
ClinGen TOPMed |
|
|
CA351310578 rs1360017781 |
602 | S>C | No |
ClinGen gnomAD |
|
|
rs1286641700 CA351310613 |
604 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1349956538 CA351310678 |
607 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA351310672 rs1349956538 |
607 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs758418220 CA2205985 |
607 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs200200867 CA351310726 |
608 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2205987 rs368540986 |
609 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA351310748 rs1228078555 |
610 | Q>E | No |
ClinGen TOPMed |
|
|
rs1200284337 CA351310758 |
610 | Q>L | No |
ClinGen gnomAD |
|
|
CA351310791 rs1575453363 |
612 | V>G | No |
ClinGen Ensembl |
|
|
RCV000970919 VAR_014442 CA2205988 rs146148004 |
613 | S>N | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA2205990 rs745327529 |
614 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2205989 rs567904223 |
614 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1472011221 CA351310847 |
616 | C>R | No |
ClinGen gnomAD |
|
|
rs149857900 CA2205993 |
617 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA351310931 rs1425649816 |
620 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA351310920 rs1171881171 |
620 | A>T | No |
ClinGen gnomAD |
|
|
rs1425649816 CA351310932 |
620 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA2205996 rs761042233 |
623 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA2205997 rs771095340 |
624 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA351310993 rs771095340 |
624 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs776869845 CA2205998 |
624 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA351310999 rs776869845 |
624 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA351311016 rs1461984703 |
625 | V>F | No |
ClinGen TOPMed |
|
| TCGA novel | 625 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351311057 rs1233194625 |
629 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA2206000 rs765286984 |
629 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1233194625 CA351311059 |
629 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
COSM1018751 CA2206001 rs774894214 COSM1018750 |
632 | P>L | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs749991824 CA68134484 |
635 | E>G | No |
ClinGen Ensembl |
|
| TCGA novel | 637 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2206006 rs757147265 |
637 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA2206008 rs767456254 |
639 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767456254 CA2206007 |
639 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 639 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760113108 CA2206010 |
640 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2206009 rs760113108 |
640 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1166483412 CA351311229 |
642 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs368061198 CA2206011 |
643 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368061198 CA351311236 |
643 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2206012 rs758774838 |
646 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA2206014 rs747336055 |
647 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs371891730 CA2206040 |
651 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA351311400 rs1390003173 |
653 | S>G | No |
ClinGen gnomAD |
|
|
rs1214496836 CA351311404 |
653 | S>N | No |
ClinGen TOPMed |
|
|
CA2206042 rs377273030 |
654 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA351311427 rs773087029 |
654 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351311459 rs1575453776 |
656 | M>R | No |
ClinGen Ensembl |
|
|
rs1005044855 CA68134945 |
657 | L>P | No |
ClinGen Ensembl |
|
|
CA2206044 rs760541896 |
658 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA351311480 rs1186477745 |
658 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1016397008 CA68134953 |
660 | F>I | No |
ClinGen Ensembl |
|
|
CA2206078 VAR_014443 rs2975766 |
666 | I>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1167527541 CA351312162 |
667 | M>I | No |
ClinGen gnomAD |
|
|
rs376583576 CA68135360 |
667 | M>T | No |
ClinGen ESP TOPMed gnomAD |
|
| TCGA novel | 668 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351312225 rs1354616159 |
669 | V>A | No |
ClinGen gnomAD |
|
|
rs748199944 CA2206079 |
670 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1377088756 CA351312286 |
671 | K>E | No |
ClinGen TOPMed |
|
|
rs1290693222 CA351312304 |
671 | K>T | No |
ClinGen TOPMed |
|
|
rs1291773759 CA351312327 |
672 | T>I | No |
ClinGen gnomAD |
1 associated diseases with Q9HC96
[MIM: 601283]: Diabetes mellitus, non-insulin-dependent, 1 (NIDDM1)
A multifactorial disorder of glucose homeostasis caused by a lack of sensitivity to the body's own insulin. Affected individuals usually have an obese body habitus and manifestations of a metabolic syndrome characterized by diabetes, insulin resistance, hypertension and hypertriglyceridemia. The disease results in long-term complications that affect the eyes, kidneys, nerves, and blood vessels. {ECO:0000269|PubMed:11017071, ECO:0000269|PubMed:16721485}. Note=Disease susceptibility is associated with variants affecting the gene represented in this entry.
Without disease ID
- A multifactorial disorder of glucose homeostasis caused by a lack of sensitivity to the body's own insulin. Affected individuals usually have an obese body habitus and manifestations of a metabolic syndrome characterized by diabetes, insulin resistance, hypertension and hypertriglyceridemia. The disease results in long-term complications that affect the eyes, kidneys, nerves, and blood vessels. {ECO:0000269|PubMed:11017071, ECO:0000269|PubMed:16721485}. Note=Disease susceptibility is associated with variants affecting the gene represented in this entry.
8 regional properties for Q9HC96
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| active_site | Cysteine peptidase, cysteine active site | 67 - 78 | IPR000169 |
| domain | Peptidase C2, calpain, catalytic domain | 2 - 329 | IPR001300 |
| domain | Peptidase C2, calpain, large subunit, domain III | 344 - 486 | IPR022682-1 |
| domain | Peptidase C2, calpain, large subunit, domain III | 520 - 642 | IPR022682-2 |
| domain | Peptidase C2, calpain, domain III | 338 - 494 | IPR022683-1 |
| domain | Peptidase C2, calpain, domain III | 513 - 654 | IPR022683-2 |
| domain | Calpain subdomain III | 335 - 496 | IPR033883-1 |
| domain | Calpain subdomain III | 512 - 653 | IPR033883-2 |
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium-dependent cysteine-type endopeptidase activity | Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium. |
| cytoskeletal protein binding | Binding to a protein component of a cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton). |
| SNARE binding | Binding to a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein. |
9 GO annotations of biological process
| Name | Definition |
|---|---|
| actin cytoskeleton reorganization | A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins. |
| cellular component disassembly involved in execution phase of apoptosis | The breakdown of structures such as organelles, proteins, or other macromolecular structures during apoptosis. |
| cellular response to insulin stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms. |
| positive regulation of glucose import | Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle. |
| positive regulation of insulin secretion | Any process that activates or increases the frequency, rate or extent of the regulated release of insulin. |
| positive regulation of intracellular transport | Any process that activates or increases the frequency, rate or extent of the directed movement of substances within cells. |
| positive regulation of type B pancreatic cell apoptotic process | Any process that activates or increases the frequency, rate or extent of type B pancreatic cell apoptotic process. |
| proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
| type B pancreatic cell apoptotic process | Any apoptotic process in a type B pancreatic cell, a cell located towards center of the islets of Langerhans that secretes insulin. |
19 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q27970 | CAPN1 | Calpain-1 catalytic subunit | Bos taurus (Bovine) | PR |
| Q27971 | CAPN2 | Calpain-2 catalytic subunit | Bos taurus (Bovine) | PR |
| P00789 | Calpain-1 catalytic subunit | Gallus gallus (Chicken) | PR | |
| Q9VXH6 | CalpC | Calpain-C | Drosophila melanogaster (Fruit fly) | PR |
| P07384 | CAPN1 | Calpain-1 catalytic subunit | Homo sapiens (Human) | PR |
| O14815 | CAPN9 | Calpain-9 | Homo sapiens (Human) | PR |
| Q6MZZ7 | CAPN13 | Calpain-13 | Homo sapiens (Human) | PR |
| O35350 | Capn1 | Calpain-1 catalytic subunit | Mus musculus (Mouse) | PR |
| G3UZ78 | Adgb | Androglobin | Mus musculus (Mouse) | PR |
| O08529 | Capn2 | Calpain-2 catalytic subunit | Mus musculus (Mouse) | PR |
| Q9D805 | Capn9 | Calpain-9 | Mus musculus (Mouse) | PR |
| Q3UW68 | Capn13 | Calpain-13 | Mus musculus (Mouse) | PR |
| Q9ESK3 | Capn10 | Calpain-10 | Mus musculus (Mouse) | PR |
| P35750 | CAPN1 | Calpain-1 catalytic subunit | Sus scrofa (Pig) | PR |
| P43367 | CAPN2 | Calpain-2 catalytic subunit | Sus scrofa (Pig) | PR |
| O35920 | Capn9 | Calpain-9 | Rattus norvegicus (Rat) | PR |
| P97571 | Capn1 | Calpain-1 catalytic subunit | Rattus norvegicus (Rat) | PR |
| Q5BK10 | Capn13 | Calpain-13 | Rattus norvegicus (Rat) | PR |
| Q07009 | Capn2 | Calpain-2 catalytic subunit | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MRAGRGATPA | RELFRDAAFP | AADSSLFCDL | STPLAQFRED | ITWRRPQEIC | ATPRLFPDDP |
| 70 | 80 | 90 | 100 | 110 | 120 |
| REGQVKQGLL | GDCWFLCACA | ALQKSRHLLD | QVIPPGQPSW | ADQEYRGSFT | CRIWQFGRWV |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EVTTDDRLPC | LAGRLCFSRC | QREDVFWLPL | LEKVYAKVHG | SYEHLWAGQV | ADALVDLTGG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LAERWNLKGV | AGSGGQQDRP | GRWEHRTCRQ | LLHLKDQCLI | SCCVLSPRAG | ARELGEFHAF |
| 250 | 260 | 270 | 280 | 290 | 300 |
| IVSDLRELQG | QAGQCILLLR | IQNPWGRRCW | QGLWREGGEG | WSQVDAAVAS | ELLSQLQEGE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| FWVEEEEFLR | EFDELTVGYP | VTEAGHLQSL | YTERLLCHTR | ALPGAWVKGQ | SAGGCRNNSG |
| 370 | 380 | 390 | 400 | 410 | 420 |
| FPSNPKFWLR | VSEPSEVYIA | VLQRSRLHAA | DWAGRARALV | GDSHTSWSPA | SIPGKHYQAV |
| 430 | 440 | 450 | 460 | 470 | 480 |
| GLHLWKVEKR | RVNLPRVLSM | PPVAGTACHA | YDREVHLRCE | LSPGYYLAVP | STFLKDAPGE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| FLLRVFSTGR | VSLSAIRAVA | KNTTPGAALP | AGEWGTVQLR | GSWRVGQTAG | GSRNFASYPT |
| 550 | 560 | 570 | 580 | 590 | 600 |
| NPCFPFSVPE | GPGPRCVRIT | LHQHCRPSDT | EFHPIGFHIF | QVPEGGRSQD | APPLLLQEPL |
| 610 | 620 | 630 | 640 | 650 | 660 |
| LSCVPHRYAQ | EVSRLCLLPA | GTYKVVPSTY | LPDTEGAFTV | TIATRIDRPS | IHSQEMLGQF |
| 670 | |||||
| LQEVSIMAVM | KT |