Q13488
Gene name |
TCIRG1 (ATP6N1C, ATP6V0A3) |
Protein name |
V-type proton ATPase 116 kDa subunit a 3 |
Names |
V-ATPase 116 kDa subunit a 3, Osteoclastic proton pump 116 kDa subunit, OC-116 kDa, OC116, T-cell immune regulator 1, T-cell immune response cDNA7 protein, TIRC7, Vacuolar proton translocating ATPase 116 kDa subunit a isoform 3 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:10312 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q13488
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q13488-F1 | Predicted | AlphaFoldDB |
866 variants for Q13488
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV002537802 RCV001278549 CA6146611 rs768203698 |
6 | R>Q | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001278548 rs563996115 CA6146610 RCV002537801 |
6 | R>W | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
RCV001278550 CA6146622 RCV002508303 rs377034463 |
20 | A>V | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001859820 COSM544995 rs139397145 RCV000353919 CA6146629 |
28 | R>W | lung Autosomal recessive osteopetrosis 1 [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001880267 rs775576535 CA6146636 RCV001278551 |
33 | G>S | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs370319355 CA6146669 RCV002530672 RCV000666224 |
50 | R>C | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
COSM1582110 RCV001111574 RCV000916912 rs118141250 CA6146672 |
52 | V>L | Autosomal recessive osteopetrosis 1 stomach [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002278385 RCV000358674 RCV000456098 rs36027301 CA6146675 VAR_054340 RCV001517192 |
56 | R>W | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001278552 rs150648332 CA381574682 |
57 | R>L | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001856485 RCV001112049 rs1855184602 |
58 | C>R | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs886048593 CA10631405 RCV000265048 |
66 | T>I | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000667217 rs1554995009 CA381575145 RCV001855477 |
69 | Q>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000666514 rs1208311085 RCV001855462 |
81 | P>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
COSM4146216 CA202788 rs142855299 RCV000324864 RCV000898643 RCV000178256 |
83 | K>E | Autosomal recessive osteopetrosis 1 thyroid [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs982462013 RCV001278554 CA224202896 RCV002537804 |
87 | P>L | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001310219 CA224202910 rs908094911 |
90 | P>Q | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV002555085 RCV001112050 rs371907380 CA6146691 |
92 | R>W | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000672867 rs886048594 RCV001850622 |
102 | E>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA6146694 RCV000880633 rs771198568 RCV001276531 RCV002539295 |
103 | R>C | Autosomal recessive osteopetrosis 1 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001350219 rs775326246 RCV001831157 CA381575923 |
103 | R>P | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA381576216 RCV000668174 rs1338631330 RCV000798499 |
116 | Q>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs377377656 CA224203046 RCV000667355 |
131 | V>M | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
|
RCV000928293 CA6146707 RCV001273366 rs35354504 |
138 | P>S | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
| VAR_020988 | 141 | A>P | OPTB1 [UniProt] | Yes | UniProt |
|
RCV000670435 rs1554995330 CA381576854 |
156 | Q>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000906858 rs199632510 CA6146729 RCV000385020 |
159 | G>E | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1554995350 RCV000674223 |
160 | G>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs186758849 RCV000658609 CA203077 RCV001114992 RCV000178911 |
160 | G>E | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000672608 RCV002532130 rs1554995341 |
161 | P>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000224444 rs34227834 CA6146731 VAR_054341 RCV000290752 |
161 | P>L | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000674126 CA381576947 rs1385741705 |
163 | Q>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA381577191 RCV001831059 RCV001340243 rs1375468915 |
184 | R>C | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001257141 rs1855280375 |
185 | L>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1554995522 RCV000666944 |
186 | L>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs867224433 CA10631409 RCV000386032 RCV002520748 |
191 | R>C | Autosomal recessive osteopetrosis 1 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs371658110 CA6146747 RCV001862891 RCV001114994 |
192 | G>S | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1554995554 RCV000671404 |
203 | Q>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA6146749 COSM1188326 RCV000959984 RCV001276537 rs373711940 |
204 | P>L | lung Autosomal recessive osteopetrosis 1 [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA6146753 rs372826788 RCV000664822 RCV002530635 |
210 | T>M | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA381578497 RCV000669025 rs1554995662 |
217 | M>I | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000672093 CA381578480 rs1554995659 |
217 | M>V | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs748465503 RCV000179912 RCV002503696 CA247241 |
219 | F>S | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1590804397 RCV000991440 |
225 | G>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1554995706 RCV000673226 |
236 | T>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA6146778 RCV002530734 rs116001129 RCV000668036 |
236 | T>M | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs759557477 CA6146801 COSM3703650 RCV000667734 |
242 | H>R | Autosomal recessive osteopetrosis 1 liver [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC dbSNP gnomAD |
|
RCV001856459 RCV001109351 rs751988410 CA6146806 |
249 | Q>K | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000669308 rs1554995833 RCV002531224 |
251 | E>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1379501520 RCV003120525 RCV001279327 CA381579292 |
255 | G>E | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs376201635 CA381579291 RCV002537842 RCV001279326 CA6146813 |
255 | G>R | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA381579392 RCV001279328 rs1229696229 |
259 | Q>L | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs543099977 CA6146835 RCV000728504 RCV001109352 |
276 | R>W | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV002520749 CA6146837 RCV000401991 RCV003165832 rs146244480 |
284 | R>Q | Autosomal recessive osteopetrosis 1 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001814289 rs1855343916 RCV001239999 |
288 | L>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000278845 rs886048596 CA10639251 |
290 | P>L | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA6146846 RCV000338545 RCV002522201 rs540235063 |
302 | V>M | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1554996130 RCV000005792 |
308 | Q>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1855349604 RCV001109354 |
312 | S>G | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs367818260 RCV001836310 CA6146850 RCV001322831 |
314 | T>M | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP |
|
rs779622577 RCV000669680 |
314 | T>V | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA10639253 RCV000391912 RCV001859821 rs372690969 |
321 | E>Q | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000879656 CA6146855 rs202161177 RCV001276540 |
322 | A>T | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1565156743 RCV002000041 RCV002227570 |
324 | C>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs749361897 CA6146858 RCV001061622 RCV000665688 |
327 | R>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA6146863 RCV001279329 RCV002537843 rs773402451 |
331 | A>T | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1855355458 RCV001279330 |
336 | L>V | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001339257 RCV001279333 CA6146867 rs139263189 |
337 | R>Q | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002537844 rs766765320 RCV001279332 CA6146866 |
337 | R>W | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000671340 rs1159666762 RCV001199944 RCV002531278 CA381581036 |
342 | E>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV002520750 RCV001859823 CA6146924 RCV000391960 rs146023337 |
348 | V>M | Autosomal recessive osteopetrosis 1 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs758621844 CA6146926 RCV000784976 |
351 | R>H | Autosomal recessive osteopetrosis 1 Variant assessed as Somatic; 0.0 impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA6146929 RCV001279334 rs369222109 |
354 | C>S | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001330189 rs372701023 CA6146933 |
356 | D>N | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000662133 RCV001855400 CA6146941 rs375809635 |
363 | R>C | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001279335 rs755474518 RCV002541707 CA6146942 |
363 | R>H | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000940052 CA6146944 rs148619884 RCV003141899 |
366 | R>C | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA6146946 RCV003165833 RCV002520751 RCV000362594 rs369983011 |
366 | R>H | Autosomal recessive osteopetrosis 1 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA224205674 RCV001279336 rs913332283 |
367 | F>Y | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV002552435 RCV003155339 rs776436008 CA6146949 RCV001030049 |
372 | Q>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000668037 RCV001058911 rs1269558164 |
373 | G>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1554996686 RCV000667839 |
375 | V>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000778337 rs140191063 CA6147023 RCV000345603 |
403 | M>I | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000667452 RCV001390427 RCV001377672 rs137853150 RCV002307355 VAR_019569 CA381582212 RCV000005796 CA117545 |
405 | G>R | Autosomal recessive osteopetrosis 1 OPTB1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000509143 CA6147031 RCV000224875 RCV002277583 rs140963213 |
417 | A>T | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001390428 rs1489993984 RCV000673534 CA381582425 |
426 | R>* | Autosomal recessive osteopetrosis 1 Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
CA6147048 RCV000333617 RCV002520752 rs772440359 |
432 | A>T | Autosomal recessive osteopetrosis 1 Variant assessed as Somatic; 0.0 impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
rs777785526 RCV000675173 RCV001241325 CA6147051 |
433 | Q>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA117547 VAR_019570 RCV000005797 rs137853151 |
444 | R>L | Autosomal recessive osteopetrosis 1 OPTB1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
CA381583700 RCV000671418 rs1348842114 |
450 | M>R | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000669207 RCV001237832 rs200851583 CA6147088 |
458 | G>S | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
RCV002556189 RCV001112140 rs771395837 CA6147089 |
461 | Y>C | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
VAR_020989 rs771271907 |
462 | N>missing | OPTB1 [UniProt] | Yes |
UniProt dbSNP |
|
RCV000672760 rs1554997997 |
462 | N>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_020989 rs771271907 |
462 | N>del | OPTB1 [UniProt] | Yes |
UniProt dbSNP |
|
CA117542 RCV000005793 rs137853149 |
464 | C>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA6147096 rs774244420 RCV001831045 RCV001338108 |
468 | A>T | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs750456593 RCV001115088 CA6147099 |
473 | P>S | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
COSM3935608 RCV002531411 RCV000680122 CA6147101 rs199914625 |
474 | S>L | Autosomal recessive osteopetrosis 1 Variant assessed as Somatic; 0.0 impact. oesophagus [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000665747 rs1554998061 |
480 | A>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs141474168 RCV002069456 RCV001279340 CA6147142 |
496 | T>M | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs369803798 RCV000593066 RCV000315991 CA6147147 |
503 | N>S | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1855591352 RCV001115089 |
504 | V>D | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA6147149 rs755559179 RCV001315489 RCV001836292 |
504 | V>I | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA224208694 RCV001307248 rs868702370 RCV001830238 |
510 | G>R | Autosomal recessive osteopetrosis 1 Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
RCV000280819 RCV001859824 rs776489478 CA6147155 |
514 | F>I | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001375862 VAR_020990 rs369264588 RCV001814292 RCV001251405 RCV002570450 CA6147157 |
517 | D>N | Autosomal recessive osteopetrosis 1 OPTB1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs1057517365 RCV000410207 CA16041533 |
520 | W>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA6147196 RCV001279341 rs376351835 |
529 | F>L | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs142539969 RCV001109451 RCV000327113 CA6147202 |
539 | V>I | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001279343 CA6147207 rs763319140 |
543 | V>I | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs371505143 CA6147210 RCV000985061 RCV001858610 |
544 | V>M | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000729906 RCV001279345 CA6147215 rs779779379 |
555 | F>L | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP |
|
RCV001511036 CA201159 rs35089741 RCV000376815 RCV000174755 RCV002277345 |
558 | V>L | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002538381 RCV001289553 rs1855655612 |
562 | Q>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001302706 RCV001830189 CA224209634 rs890729823 |
565 | R>W | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV002520753 CA6147244 RCV000342076 rs61730880 |
570 | T>M | Autosomal recessive osteopetrosis 1 Variant assessed as Somatic; 0.0 impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000918521 rs115854062 CA6147246 RCV001109453 |
572 | P>L | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA6147248 rs576389893 RCV002541709 RCV001279347 |
573 | E>G | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
rs1425479122 RCV000669687 |
603 | A>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA6147275 RCV001279348 rs751612634 |
609 | H>Y | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1554999148 RCV000673743 |
612 | N>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA6147278 rs753897523 RCV001871577 RCV001279726 |
615 | L>I | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA10639258 rs886048599 RCV000307075 |
618 | H>R | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001871578 CA6147287 rs201661352 RCV002541722 RCV001279729 |
628 | R>Q | Autosomal recessive osteopetrosis 1 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000666021 rs1554999516 |
631 | V>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1300297240 RCV000671737 RCV000800056 |
631 | V>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001856482 rs765175241 RCV001111766 CA6147318 |
633 | Q>R | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000347884 CA6147320 RCV000930117 rs763119311 |
635 | T>M | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1554999539 RCV000667459 |
635 | T>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000674519 rs757802200 |
658 | R>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000670478 rs1554999610 |
659 | H>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001350387 CA381588941 RCV001831159 rs528045019 |
660 | R>G | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001111767 CA6147336 RCV001856483 rs746874956 |
660 | R>H | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000667308 rs781509075 |
661 | R>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs763065648 CA6147339 RCV001111768 RCV002556178 |
662 | R>H | Autosomal recessive osteopetrosis 1 Variant assessed as Somatic; 0.0 impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
RCV000669827 rs886332099 |
666 | R>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001199854 rs371263807 RCV000819121 CA6147346 RCV000666300 |
670 | R>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1590817956 RCV000815242 CA381589473 RCV002501118 |
689 | W>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001111769 rs772173081 CA6147379 |
691 | S>P | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs573002924 RCV001871579 RCV001279734 CA6147412 |
708 | V>I | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000277789 CA6147423 RCV001572714 rs150260808 |
721 | I>N | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000671164 CA381590492 rs1279951928 |
729 | S>P | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000663355 RCV000133575 CA170625 RCV000224333 rs587779413 |
736 | R>S | Neutropenia, severe congenital, 1, autosomal dominant (scn1) Congenital neutropenia Neutropenia, severe congenital, 1, autosomal dominant [Ensembl, ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA6147442 RCV000668642 rs748659068 RCV001387137 |
746 | Q>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001279737 rs1855752104 |
765 | E>K | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_020991 | 775 | P>R | OPTB1 [UniProt] | Yes | UniProt |
|
RCV002522202 rs144775787 RCV000941287 RCV000320118 CA6147502 |
778 | A>V | Autosomal recessive osteopetrosis 1 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001279738 RCV001302227 CA6147507 rs779910642 |
782 | V>M | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1555000308 CA381592295 RCV000674141 |
805 | W>* | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1308533755 CA381592792 RCV001279740 |
815 | G>S | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000855724 rs1590819834 |
818 | Y>missing | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs886048602 RCV000263957 CA10631425 |
825 | F>L | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000967765 RCV001727675 RCV000323728 rs75596506 CA6147554 |
826 | A>T | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs147175413 RCV001279741 CA6147557 RCV001871580 |
829 | D>G | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
RCV000674548 rs1555000463 |
831 | D>= | Autosomal recessive osteopetrosis 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1328822079 CA381572426 |
2 | G>S | No |
ClinGen gnomAD |
|
|
rs1224318177 CA381572435 |
2 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA6146609 rs201972729 |
3 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1186239406 CA381572466 |
4 | M>K | No |
ClinGen TOPMed |
|
|
CA224199553 rs915427435 |
4 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA381572497 rs1233969553 |
5 | F>L | No |
ClinGen gnomAD |
|
|
CA6146612 rs768203698 |
6 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381572522 rs1565152516 |
7 | S>N | No |
ClinGen Ensembl |
|
|
rs1480589952 CA381572541 |
8 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA381572553 rs1480589952 |
8 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1391565123 CA381572575 |
9 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA6146615 rs773182208 |
10 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1590799978 CA381572594 |
10 | V>L | No |
ClinGen Ensembl |
|
|
rs759582690 CA6146616 |
11 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1449734297 CA381572629 |
11 | A>V | No |
ClinGen gnomAD |
|
|
rs765426561 CA6146617 |
12 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1356265373 CA381572642 |
13 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1356265373 CA381572643 |
13 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs752849425 CA381572743 |
17 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752849425 CA6146619 |
17 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1031917384 CA224199621 |
20 | A>T | No |
ClinGen Ensembl |
|
|
rs757721543 CA6146623 |
21 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781759806 CA6146624 |
22 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6146627 rs779555019 |
26 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs748751488 CA6146628 |
27 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA6146630 rs139397145 |
28 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs747914463 CA381572966 |
28 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6146631 rs747914463 |
28 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6146635 rs770787381 |
31 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA6146634 rs549532182 |
31 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs762979070 CA6146637 |
33 | G>V | No |
ClinGen ExAC gnomAD |
|
|
RCV001246853 rs1855151891 |
34 | L>missing | No |
ClinVar dbSNP |
|
|
rs929362651 CA381573042 |
35 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs929362651 CA224199741 |
35 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA381573083 rs1565152710 |
37 | F>I | No |
ClinGen Ensembl |
|
|
CA381573144 rs764330464 |
39 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs866120209 CA224201888 |
40 | L>I | No |
ClinGen Ensembl |
|
|
CA6146664 rs147102889 |
41 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6146665 rs752218792 |
42 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 45 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6146668 rs746760136 |
46 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381574380 rs777437386 |
46 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777437386 CA6146667 COSM931177 |
46 | A>T | ovary Variant assessed as Somatic; 0.0 impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA381574485 rs1424325891 |
49 | R>K | No |
ClinGen TOPMed |
|
|
rs781157122 CA6146670 |
50 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6146671 rs138308753 |
51 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 52 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs118141250 CA224201929 |
52 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs547282246 CA6146673 |
53 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381574572 rs1281623303 |
53 | V>I | No |
ClinGen gnomAD |
|
|
CA6146676 rs36027301 |
56 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs368777603 CA224201966 |
56 | R>P | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA381574668 rs368777603 |
56 | R>Q | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA6146677 rs763667012 |
57 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs150648332 CA6146678 |
57 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381574942 rs1230929903 |
65 | F>L | No |
ClinGen gnomAD |
|
|
CA6146679 rs372707757 |
66 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs886048593 CA224202781 |
66 | T>N | No |
ClinGen gnomAD |
|
|
CA224202785 rs924034232 |
67 | F>L | No |
ClinGen TOPMed |
|
|
rs1199962112 CA381575153 |
69 | Q>R | No |
ClinGen gnomAD |
|
|
CA381575174 rs1304120625 |
70 | E>V | No |
ClinGen gnomAD |
|
|
CA381575212 rs1347081763 |
72 | V>A | No |
ClinGen gnomAD |
|
|
rs1347081763 CA381575209 |
72 | V>E | No |
ClinGen gnomAD |
|
|
rs1300050851 COSM1356484 CA381575222 |
73 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA381575219 rs1384688935 |
73 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1013345702 CA224202793 |
74 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs780788680 CA6146687 |
74 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224202800 rs896473596 |
75 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA381575242 rs1024753171 |
75 | A>S | No |
ClinGen gnomAD |
|
|
rs1024753171 CA224202799 |
75 | A>T | No |
ClinGen gnomAD |
|
|
rs1590802365 CA381575291 |
77 | L>R | No |
ClinGen Ensembl |
|
|
CA381575316 rs1293665875 |
78 | V>A | No |
ClinGen gnomAD |
|
|
rs1489611026 CA381575329 |
79 | L>P | No |
ClinGen gnomAD |
|
|
CA381575342 rs1266896439 |
80 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs745676260 CA6146688 |
80 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA381575339 rs1266896439 |
80 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA381575345 rs1266896439 |
80 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs375348720 CA224202807 |
81 | P>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs982462013 CA224202892 |
87 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA381575545 rs1292612021 |
89 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA224202916 rs908094911 |
90 | P>L | No |
ClinGen gnomAD |
|
|
rs1006811481 CA224202917 |
91 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1383427902 CA381575594 |
91 | P>S | No |
ClinGen gnomAD |
|
|
CA6146692 rs773563515 |
92 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381575676 rs1317016558 |
93 | D>E | No |
ClinGen gnomAD |
|
|
rs1317644313 CA381575702 |
95 | L>M | No |
ClinGen TOPMed |
|
|
CA381575736 rs1319738175 |
96 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA381575750 rs1243713569 |
97 | I>N | No |
ClinGen gnomAD |
|
|
CA381575765 rs1554995115 RCV000595032 |
98 | Q>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA381575785 rs1265099845 |
98 | Q>H | No |
ClinGen gnomAD |
|
|
CA224202938 rs993860020 |
100 | E>V | No |
ClinGen TOPMed |
|
|
rs1040671295 CA224202948 |
101 | T>M | No |
ClinGen gnomAD |
|
|
CA381575911 rs1590802568 |
102 | E>D | No |
ClinGen Ensembl |
|
|
rs775326246 CA6146695 |
103 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1467058950 CA381576014 |
107 | E>K | No |
ClinGen TOPMed |
|
|
rs765686263 CA381576067 |
109 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765686263 CA6146697 |
109 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6146696 rs201329219 |
109 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6146698 rs776027825 |
110 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381576106 rs1364074551 |
111 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA381576102 rs1364074551 |
111 | V>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1050500045 CA224203007 |
112 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs762422453 CA6146699 |
112 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1387246190 CA381576127 |
113 | G>S | No |
ClinGen gnomAD |
|
|
rs1218201128 CA381576206 |
115 | Q>H | No |
ClinGen TOPMed |
|
|
rs763664425 CA6146700 |
117 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1395300898 CA381576255 |
117 | A>V | No |
ClinGen gnomAD |
|
|
rs1290073512 CA381576276 |
119 | R>Q | No |
ClinGen gnomAD |
|
|
rs1307439139 CA381576272 |
119 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA224203011 rs967962426 |
120 | A>V | No |
ClinGen TOPMed |
|
|
rs1317790060 CA381576317 |
121 | Q>H | No |
ClinGen gnomAD |
|
|
CA381576345 rs1230441468 |
123 | H>R | No |
ClinGen gnomAD |
|
|
rs1565154253 CA381576358 |
124 | Q>* | No |
ClinGen Ensembl |
|
|
rs903939170 CA224203027 |
126 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1590802738 CA381576403 |
126 | Q>P | No |
ClinGen Ensembl |
|
|
CA381576415 rs1375882126 |
127 | L>V | No |
ClinGen TOPMed |
|
|
CA6146701 rs3808973 |
128 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1052401866 CA224203039 |
129 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA381576449 rs1239735537 |
129 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs935429358 CA224203044 |
130 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1251650327 CA381576470 |
130 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs756020553 CA6146704 |
133 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201233914 CA6146705 |
133 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs888041200 CA224203052 |
134 | Q>E | No |
ClinGen TOPMed |
|
|
CA381576535 rs1357428039 |
135 | G>S | No |
ClinGen gnomAD |
|
|
rs549402119 CA224203053 |
136 | H>P | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA6146706 CA381576562 rs567920476 |
136 | H>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1590802849 CA381576589 |
138 | P>L | No |
ClinGen Ensembl |
|
|
rs1218654453 CA381576660 |
140 | L>P | No |
ClinGen gnomAD |
|
|
rs377425304 CA6146716 |
143 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377425304 CA381576688 |
143 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381576698 rs1274332067 |
143 | A>V | No |
ClinGen gnomAD |
|
|
CA6146717 COSM3687593 rs773690722 |
144 | H>R | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1017915060 CA224203196 |
144 | H>Y | No |
ClinGen TOPMed |
|
|
CA6146719 rs767052351 |
145 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA224203240 rs986723688 |
146 | D>H | No |
ClinGen gnomAD |
|
|
rs986723688 CA224203234 |
146 | D>N | No |
ClinGen gnomAD |
|
|
CA381576752 rs1186529106 |
148 | A>S | No |
ClinGen gnomAD |
|
| TCGA novel | 148 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs979358405 CA224203244 |
149 | S>* | No |
ClinGen TOPMed |
|
|
rs925363548 CA224203242 |
149 | S>T | No |
ClinGen Ensembl |
|
|
rs760540347 CA6146721 |
152 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224203262 rs760540347 |
152 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381576811 rs760540347 |
152 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1325811983 CA381576825 |
153 | P>L | No |
ClinGen gnomAD |
|
|
rs371138836 CA224203304 |
153 | P>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA381576819 rs371138836 |
153 | P>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA381576842 rs1435922295 |
155 | L>F | No |
ClinGen gnomAD |
|
|
rs892466007 CA224203323 |
156 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs778942094 CA6146726 |
157 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs751546005 CA6146727 |
158 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381576882 rs751546005 |
158 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs573845313 CA381576893 CA6146728 |
159 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs1554995341 | 161 | P>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381576913 rs1249309366 |
161 | P>T | No |
ClinGen gnomAD |
|
|
rs1385741705 CA381576945 |
163 | Q>E | No |
ClinGen gnomAD |
|
|
CA381576976 rs1161229165 |
165 | L>R | No |
ClinGen gnomAD |
|
|
rs370395754 CA6146733 |
166 | R>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA224203393 rs888303395 |
167 | V>I | No |
ClinGen Ensembl |
|
|
rs1160066233 CA381577009 |
168 | N>H | No |
ClinGen gnomAD |
|
|
rs1008224466 CA224203802 |
171 | A>E | No |
ClinGen gnomAD |
|
|
CA381577107 rs1008224466 |
171 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 172 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1181597808 CA381577122 |
173 | A>G | No |
ClinGen gnomAD |
|
|
CA381577123 rs1479019892 |
174 | V>M | No |
ClinGen gnomAD |
|
|
rs757283082 CA6146744 |
175 | E>G | No |
ClinGen ExAC |
|
|
CA381577139 rs1171368158 |
176 | P>H | No |
ClinGen gnomAD |
|
|
CA224203820 rs550763346 |
184 | R>H | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA224203832 rs988284407 |
189 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs367703865 CA6146746 COSM931178 |
191 | R>H | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1016352363 CA224203865 |
195 | I>T | No |
ClinGen TOPMed |
|
|
CA381577263 rs1189952990 |
196 | A>T | No |
ClinGen TOPMed |
|
|
CA381577270 rs1475592042 |
197 | S>G | No |
ClinGen TOPMed |
|
|
CA381577272 rs1274200414 |
197 | S>N | No |
ClinGen gnomAD |
|
|
rs1342775041 CA381577278 |
198 | F>L | No |
ClinGen gnomAD |
|
|
CA381577292 rs1262519957 |
200 | E>K | No |
ClinGen TOPMed |
|
|
rs1482222995 CA381577323 |
204 | P>S | No |
ClinGen gnomAD |
|
|
rs1450605645 CA381577351 |
208 | P>L | No |
ClinGen gnomAD |
|
|
CA381577348 rs1377623079 |
208 | P>S | No |
ClinGen gnomAD |
|
|
CA381577354 rs879921769 |
209 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA224203921 rs879921769 |
209 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA381577359 rs1275619155 |
210 | T>A | No |
ClinGen TOPMed |
|
|
rs1388756575 CA381578388 |
211 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA224203997 rs371800878 |
212 | E>A | No |
ClinGen ESP TOPMed |
|
|
rs368374708 CA6146767 |
212 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368374708 CA381578395 |
212 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381578444 rs1396449217 |
215 | T>A | No |
ClinGen gnomAD |
|
|
CA6146768 rs755283570 |
215 | T>M | No |
ClinGen ExAC gnomAD |
|
|
CA381578530 rs1242912856 |
219 | F>L | No |
ClinGen gnomAD |
|
|
rs1329940998 CA381578579 |
221 | I>M | No |
ClinGen gnomAD |
|
|
CA381578598 rs1246792928 |
223 | Y>H | No |
ClinGen gnomAD |
|
|
CA381578634 rs1485827427 |
225 | G>S | No |
ClinGen gnomAD |
|
|
CA381578644 rs1258673482 |
226 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA224204060 rs552952262 |
227 | Q>R | No |
ClinGen 1000Genomes |
|
|
rs770606668 CA6146773 |
229 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746497338 CA6146772 |
229 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381578678 rs1156299579 |
230 | Q>* | No |
ClinGen gnomAD |
|
|
rs776421112 CA381578722 |
233 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6146775 rs776421112 |
233 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769348368 CA224204090 |
233 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769348368 CA6146776 |
233 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6146774 rs776421112 |
233 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1376740807 CA381578730 |
234 | K>Q | No |
ClinGen gnomAD |
|
|
rs1554995715 RCV000597322 |
235 | I>missing | No |
ClinVar dbSNP |
|
|
CA6146777 rs775292379 |
235 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763993521 CA6146779 |
238 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381578948 rs1283493088 |
240 | H>R | No |
ClinGen TOPMed |
|
|
CA381578968 rs1234230686 |
241 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1054033489 CA224204258 |
242 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs765476130 CA6146802 |
243 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6146803 rs752904356 |
244 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA6146805 rs550724647 |
245 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6146804 rs550724647 |
245 | P>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381579047 rs550724647 |
245 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1189182100 CA381579113 |
248 | Q>* | No |
ClinGen gnomAD |
|
|
CA381579135 rs751988410 |
249 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381579170 rs1419160143 |
249 | Q>H | No |
ClinGen gnomAD |
|
|
rs757776593 CA6146807 |
249 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA381579215 rs1590804961 |
251 | E>* | No |
ClinGen Ensembl |
|
|
CA6146808 rs781773533 |
252 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381579244 rs781773533 |
252 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381579240 rs781773533 |
252 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6146809 rs749921928 |
253 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs755617128 CA6146810 |
253 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs755617128 CA381579268 |
253 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755617128 CA381579266 |
253 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6146811 rs569142867 |
254 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA224204310 rs376201635 |
255 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1231339271 CA381579302 |
256 | A>P | No |
ClinGen TOPMed |
|
|
rs1231339271 CA381579300 |
256 | A>T | No |
ClinGen TOPMed |
|
|
CA224204312 rs866821968 |
258 | Q>* | No |
ClinGen Ensembl |
|
|
rs866821968 CA381579354 |
258 | Q>E | No |
ClinGen Ensembl |
|
|
rs868712159 CA224204316 |
260 | L>M | No |
ClinGen gnomAD |
|
|
CA381579440 rs1208748869 |
262 | Q>* | No |
ClinGen gnomAD |
|
|
CA381579439 rs1208748869 |
262 | Q>E | No |
ClinGen gnomAD |
|
|
CA224204321 rs1003722483 |
263 | Q>* | No |
ClinGen Ensembl |
|
|
rs1399468814 CA381579475 |
263 | Q>H | No |
ClinGen TOPMed |
|
|
CA381579464 rs1293927571 |
263 | Q>R | No |
ClinGen TOPMed |
|
|
rs747968023 CA6146815 |
264 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1034150579 CA224204325 |
265 | Q>K | No |
ClinGen TOPMed |
|
|
CA381579604 rs1349619686 |
269 | E>V | No |
ClinGen TOPMed |
|
| TCGA novel | 270 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs955301667 CA224204653 |
271 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA6146833 CA381579736 rs769761112 |
272 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747906395 CA6146834 |
273 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs935877148 CA224204694 |
275 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
rs554726944 CA6146836 |
276 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1181161290 CA381579954 |
281 | V>M | No |
ClinGen gnomAD |
|
|
CA381579992 rs1590805845 |
283 | G>A | No |
ClinGen Ensembl |
|
|
CA224204713 rs1039065279 |
284 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1438649189 CA381580129 |
291 | P>S | No |
ClinGen gnomAD |
|
|
CA224204722 rs945686957 |
292 | G>R | No |
ClinGen Ensembl |
|
|
CA381580180 rs1342609077 |
293 | Q>* | No |
ClinGen gnomAD |
|
|
CA224204759 rs1045419378 |
293 | Q>H | No |
ClinGen gnomAD |
|
|
rs374215087 CA6146841 |
293 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381580205 rs1337694224 |
294 | V>L | No |
ClinGen gnomAD |
|
|
CA6146842 rs774767504 |
295 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224204779 rs573287519 |
295 | Q>H | No |
ClinGen 1000Genomes gnomAD |
|
|
rs762259521 CA6146843 |
300 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs767839791 CA6146844 |
300 | K>M | No |
ClinGen ExAC gnomAD |
|
|
CA381580412 rs540235063 |
302 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1855347940 RCV001057048 |
303 | Y>missing | No |
ClinVar dbSNP |
|
|
CA381580450 rs1449131788 |
304 | L>P | No |
ClinGen TOPMed |
|
|
CA381580465 rs1329452774 |
305 | A>D | No |
ClinGen Ensembl |
|
|
CA381580457 rs1163426827 |
305 | A>T | No |
ClinGen gnomAD |
|
|
rs1459350935 CA381580496 |
307 | N>S | No |
ClinGen gnomAD |
|
|
rs1325158772 CA381580548 |
310 | S>G | No |
ClinGen gnomAD |
|
|
rs78181205 CA6146848 |
311 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1324956250 CA381580611 |
313 | T>S | No |
ClinGen gnomAD |
|
|
CA381580631 rs1337046769 |
315 | H>N | No |
ClinGen gnomAD |
|
|
CA381580636 rs1337046769 |
315 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1224704097 CA381580660 |
316 | K>N | No |
ClinGen TOPMed |
|
|
rs1269259953 CA381580659 |
316 | K>R | No |
ClinGen TOPMed |
|
|
CA381580674 rs1211884318 |
317 | C>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1273183083 CA381580690 |
319 | I>V | No |
ClinGen gnomAD |
|
|
CA381580714 rs1313623995 |
320 | A>V | No |
ClinGen gnomAD |
|
|
CA381580726 rs1428246787 |
321 | E>A | No |
ClinGen gnomAD |
|
|
CA6146853 rs372690969 |
321 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs757090849 CA6146856 |
322 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1327818531 CA381580757 |
323 | W>* | No |
ClinGen TOPMed |
|
|
CA381580802 rs1163582423 |
325 | S>C | No |
ClinGen gnomAD |
|
|
CA6146859 rs376320516 |
327 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376320516 CA224204935 |
327 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376320516 CA6146860 |
327 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1384016071 CA381580828 CA381580826 |
328 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs748316729 CA6146861 |
328 | D>N | No |
ClinGen ExAC TOPMed |
|
|
CA381580830 rs1467397245 |
329 | L>M | No |
ClinGen TOPMed |
|
|
rs773402451 CA6146864 |
331 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773402451 CA381580850 |
331 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs267603146 CA224204974 |
331 | A>V | No |
ClinGen gnomAD |
|
|
CA381580869 rs1292723921 |
333 | Q>R | No |
ClinGen gnomAD |
|
|
CA381580897 rs1329877127 |
335 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1485751585 CA381580922 |
338 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1297839929 CA381580916 |
338 | D>H | No |
ClinGen TOPMed |
|
|
rs201172503 CA6146868 |
340 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs199679482 CA6146918 |
341 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1159666762 CA381581034 |
342 | E>K | No |
ClinGen gnomAD |
|
|
CA224205554 rs918851905 |
343 | E>D | No |
ClinGen Ensembl |
|
|
rs1167726677 CA381581047 |
343 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1318034539 CA381581066 |
344 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA6146921 rs746196069 |
344 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6146922 rs756515585 |
347 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA381581101 rs1416271565 |
347 | A>V | No |
ClinGen gnomAD |
|
|
rs1239069079 CA381581124 |
350 | H>P | No |
ClinGen gnomAD |
|
|
rs1239069079 CA381581126 |
350 | H>R | No |
ClinGen gnomAD |
|
|
CA224205565 rs554040286 |
350 | H>Y | No |
ClinGen Ensembl |
|
|
rs374953343 CA6146925 COSM241859 |
351 | R>C | prostate [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs374953343 CA224205567 |
351 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758621844 CA224205574 |
351 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374953343 CA381581133 |
351 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6146928 rs771820589 |
352 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs1349733720 CA381581166 |
354 | C>R | No |
ClinGen gnomAD |
|
|
CA381581168 rs369222109 |
354 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6146932 rs148627120 |
355 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs573229725 CA6146931 |
355 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 356 | D>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1469032708 CA381581190 |
356 | D>E | No |
ClinGen gnomAD |
|
|
rs751624553 CA6146934 |
358 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA381581225 rs1436902507 |
359 | P>L | No |
ClinGen gnomAD |
|
| rs1158449736 | 360 | T>H | Variant assessed as Somatic; 5.654e-05 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs757401335 CA6146940 |
362 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381581266 rs755474518 |
363 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1590807779 CA381581269 |
364 | T>P | No |
ClinGen Ensembl |
|
|
rs779330162 CA6146943 |
365 | N>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA381581285 rs1231788096 |
365 | N>S | No |
ClinGen gnomAD |
|
|
rs148619884 CA6146945 |
366 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA224205681 rs903110153 |
368 | T>A | No |
ClinGen Ensembl |
|
|
rs373988992 CA6146948 |
368 | T>M | No |
ClinGen ESP ExAC gnomAD |
|
|
CA381581321 rs1455898768 |
369 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA381581344 rs1192142500 |
371 | F>L | No |
ClinGen gnomAD |
|
|
rs769737148 CA6146951 |
374 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs200415611 CA6146953 |
375 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6146954 rs767522882 |
377 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA381581428 rs1373085443 |
378 | Y>C | No |
ClinGen gnomAD |
|
|
CA6146956 rs371004297 |
379 | G>S | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
CA6146958 rs191388932 |
380 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs894345158 CA224205750 |
381 | G>A | No |
ClinGen Ensembl |
|
|
CA6146959 rs566684294 |
382 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs566684294 CA381581469 |
382 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6146960 rs377606797 |
382 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377606797 CA381581472 |
382 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1274422321 CA381581484 |
383 | Y>F | No |
ClinGen gnomAD |
|
|
rs573145198 CA224205768 |
384 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6146962 rs573145198 |
384 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1590808024 CA381581522 |
386 | V>G | No |
ClinGen Ensembl |
|
|
CA6146963 rs777360036 |
387 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA6146966 rs142053937 |
388 | P>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs746538370 CA6146965 |
388 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 389 | A>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381581548 rs1325653652 |
389 | A>T | No |
ClinGen TOPMed |
|
|
rs1590812566 CA381582071 |
392 | T>P | No |
ClinGen Ensembl |
|
|
CA381582081 rs1397166053 COSM1746522 |
393 | I>V | urinary_tract [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA381582104 rs1413003717 |
394 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA6147019 rs749063696 |
395 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs537603997 CA6147020 |
397 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1225263595 CA381582145 |
398 | F>L | No |
ClinGen TOPMed |
|
|
rs1442151162 CA381582154 |
399 | L>R | No |
ClinGen gnomAD |
|
|
CA6147022 rs747968844 |
401 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA224207861 rs1057066730 |
403 | M>L | No |
ClinGen TOPMed |
|
|
rs1218313314 CA381582208 |
404 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA6147024 rs745990776 |
405 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA381582234 rs1396387841 |
407 | V>M | No |
ClinGen TOPMed |
|
|
CA381582245 rs1166821993 |
408 | G>S | No |
ClinGen TOPMed |
|
|
CA381582254 rs1590812665 |
408 | G>V | No |
ClinGen Ensembl |
|
|
CA6147027 CA6147026 rs775902505 |
410 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC gnomAD NCI-TCGA |
|
rs931992198 CA224207899 |
413 | M>I | No |
ClinGen Ensembl |
|
|
CA224207929 rs1044132115 |
415 | L>P | No |
ClinGen TOPMed |
|
|
CA381582330 rs1250941921 |
416 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1839400126 RCV001068858 |
417 | A>missing | No |
ClinVar dbSNP |
|
|
rs1430449011 CA381582381 |
420 | M>T | No |
ClinGen gnomAD |
|
|
CA6147032 rs749871753 |
420 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA6147035 rs766003504 |
423 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1423606769 CA381582404 |
423 | A>T | No |
ClinGen gnomAD |
|
|
CA6147034 rs766003504 |
423 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778516218 CA6147037 |
426 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200633409 CA6147039 |
427 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200633409 CA6147040 |
427 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs994091057 CA224208015 |
428 | A>V | No |
ClinGen TOPMed |
|
|
rs780415880 CA6147043 |
429 | V>G | No |
ClinGen ExAC |
|
|
rs770052734 CA6147042 |
429 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA6147044 rs749452126 |
430 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381582452 rs1334878038 |
431 | A>G | No |
ClinGen gnomAD |
|
|
CA381582453 rs1334878038 |
431 | A>V | No |
ClinGen gnomAD |
|
|
rs201385035 CA6147049 |
432 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1486959766 CA381582463 |
433 | Q>H | No |
ClinGen gnomAD |
|
|
CA381582469 rs1426703637 |
434 | N>S | No |
ClinGen TOPMed |
|
|
CA381582473 rs1423051176 |
435 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 437 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1418193014 CA381583418 |
438 | Q>* | No |
ClinGen gnomAD |
|
|
CA6147075 rs752451271 |
438 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6147076 rs559772650 |
440 | F>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs751411680 CA6147078 |
441 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1441528950 CA381583509 |
442 | R>T | No |
ClinGen TOPMed |
|
|
rs757208775 CA6147079 |
443 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA381583544 rs1252337145 |
444 | R>C | No |
ClinGen gnomAD |
|
|
rs137853151 CA6147080 |
444 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6147081 rs753947773 |
446 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs918129090 CA224208253 |
447 | L>F | No |
ClinGen TOPMed |
|
|
CA6147083 rs755147688 |
449 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA381583674 rs1285624977 |
449 | L>P | No |
ClinGen gnomAD |
|
|
COSM1228783 rs533323966 CA6147084 |
451 | G>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1245222600 CA381583799 |
454 | S>F | No |
ClinGen TOPMed |
|
|
rs758562805 CA6147086 |
457 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs758562805 CA381583838 |
457 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA381583834 rs1590813147 |
457 | T>P | No |
ClinGen Ensembl |
|
|
CA381583876 rs1590813186 |
460 | I>V | No |
ClinGen Ensembl |
|
|
rs1565160546 CA381583885 |
461 | Y>H | No |
ClinGen Ensembl |
|
| rs771271907 | 462 | N>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6147091 rs774578979 |
463 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6147092 rs774578979 |
463 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774578979 CA381583910 |
463 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774863206 CA6147093 |
467 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774863206 CA381584001 |
467 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6147094 rs370981468 |
467 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761752747 CA6147097 |
469 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1344474854 CA381584068 |
471 | I>T | No |
ClinGen gnomAD |
|
|
CA6147100 rs756009951 |
474 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199914625 CA6147102 |
474 | S>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6147105 rs200970211 |
475 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381584147 rs1182508823 |
476 | W>* | No |
ClinGen TOPMed |
|
|
rs757676092 CA6147106 |
476 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA381584161 rs1196326603 |
477 | S>C | No |
ClinGen gnomAD |
|
|
CA224208392 rs1001985320 |
477 | S>N | No |
ClinGen Ensembl |
|
|
CA6147107 rs781662187 |
478 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA224208395 rs762102912 |
479 | A>T | No |
ClinGen Ensembl |
|
|
rs537359796 CA6147109 |
480 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1465064615 CA381584223 |
481 | M>L | No |
ClinGen gnomAD |
|
|
CA381584228 rs1326413613 |
481 | M>T | No |
ClinGen gnomAD |
|
|
rs1396428560 CA381584255 |
483 | N>D | No |
ClinGen gnomAD |
|
|
rs1384849254 CA381584262 |
483 | N>S | No |
ClinGen gnomAD |
|
|
CA381584273 rs1330710686 |
484 | Q>* | No |
ClinGen gnomAD |
|
|
rs1291479314 CA381584289 |
484 | Q>H | No |
ClinGen TOPMed |
|
|
rs775013749 CA6147110 |
484 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748776167 CA6147111 |
486 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224208424 rs111872036 |
488 | S>N | No |
ClinGen Ensembl |
|
|
CA224208599 rs201443254 |
495 | H>P | No |
ClinGen Ensembl |
|
|
rs763082676 CA6147141 |
496 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA6147140 rs763082676 |
496 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs141474168 CA6147143 |
496 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs913830547 CA224208643 |
497 | M>I | No |
ClinGen Ensembl |
|
|
rs750766373 CA6147145 |
497 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1455101066 CA381584517 |
499 | T>P | No |
ClinGen gnomAD |
|
|
CA381584527 rs1160743125 |
500 | L>V | No |
ClinGen gnomAD |
|
|
rs1402798335 CA381584537 |
501 | D>N | No |
ClinGen TOPMed |
|
|
CA381584585 rs1394803884 |
505 | T>I | No |
ClinGen gnomAD |
|
|
rs747692743 CA6147150 |
506 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381584591 rs1466393887 |
507 | V>I | No |
ClinGen TOPMed |
|
|
rs1046252307 CA224208697 |
511 | P>T | No |
ClinGen Ensembl |
|
|
rs138049763 CA224208718 |
512 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381584628 rs1257277325 |
513 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1366709820 CA381584856 |
520 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA381584861 rs1366709820 |
520 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
rs557890860 CA6147192 |
521 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1355986470 CA381584887 |
521 | S>R | No |
ClinGen gnomAD |
|
|
rs557890860 CA6147193 |
521 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381584899 rs1590815475 |
522 | L>R | No |
ClinGen Ensembl |
|
|
rs1229911430 CA381584915 |
523 | A>V | No |
ClinGen gnomAD |
|
|
CA6147194 rs536594829 |
528 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs555362865 CA381584999 |
528 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6147195 rs555362865 RCV000727901 |
528 | S>T | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs1174386417 CA381585021 |
529 | F>S | No |
ClinGen TOPMed |
|
|
CA381585033 rs1191561486 |
530 | L>F | No |
ClinGen gnomAD |
|
|
rs1263166960 CA381585039 |
530 | L>P | No |
ClinGen gnomAD |
|
|
rs1473426639 CA381585054 |
531 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA381585049 rs1473426639 |
531 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
rs371214361 CA6147198 |
532 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6147199 rs768665063 |
535 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs1405124204 CA381585123 |
535 | M>L | No |
ClinGen gnomAD |
|
|
CA6147200 rs773130225 |
536 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1590815565 CA381585149 |
536 | K>R | No |
ClinGen Ensembl |
|
|
rs1417375420 CA381585184 |
537 | M>T | No |
ClinGen gnomAD |
|
|
CA6147209 rs371505143 |
544 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6147211 rs368945298 |
546 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750014017 CA6147212 |
547 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1212925249 CA381585377 |
547 | A>V | No |
ClinGen gnomAD |
|
|
rs1266695343 CA381585406 |
548 | F>S | No |
ClinGen gnomAD |
|
|
CA381585440 rs1472696830 |
549 | G>E | No |
ClinGen gnomAD |
|
|
rs1382501642 CA381585516 |
551 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA224209537 rs975157991 |
551 | V>L | No |
ClinGen TOPMed |
|
|
CA381585529 rs1437466510 |
552 | L>F | No |
ClinGen gnomAD |
|
|
CA381585596 rs1481288287 |
555 | F>S | No |
ClinGen gnomAD |
|
|
CA6147217 rs35089741 |
558 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6147239 rs770109754 |
559 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs780471507 CA6147240 |
561 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA381585986 rs1590815946 |
564 | H>P | No |
ClinGen Ensembl |
|
|
CA6147242 rs561371280 |
565 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1425184184 CA381586113 |
568 | L>V | No |
ClinGen TOPMed |
|
|
CA381586296 rs1245633475 |
573 | E>D | No |
ClinGen gnomAD |
|
|
CA381586307 rs1205816098 |
574 | L>V | No |
ClinGen TOPMed |
|
|
rs1477831442 CA381586338 |
575 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA6147249 rs776415315 |
578 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA6147250 rs144442205 |
579 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs955211475 CA224209679 |
581 | F>S | No |
ClinGen Ensembl |
|
|
rs752454557 CA6147253 |
582 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1321763798 CA381586578 |
584 | L>F | No |
ClinGen gnomAD |
|
|
CA224209701 rs957040011 |
585 | V>A | No |
ClinGen Ensembl |
|
|
CA224209693 rs1017992764 |
585 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs756319746 CA6147258 |
588 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA6147257 rs750507912 |
588 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1319607584 CA381586691 |
590 | Y>H | No |
ClinGen TOPMed |
|
|
CA6147264 rs779298401 |
594 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755179425 CA6147261 |
594 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs779298401 CA6147263 |
594 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6147265 rs773769785 |
594 | C>W | No |
ClinGen ExAC gnomAD |
|
|
CA6147262 rs779298401 |
594 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1488352542 CA381586804 |
595 | V>I | No |
ClinGen gnomAD |
|
|
rs1389467156 CA381586851 |
596 | W>C | No |
ClinGen TOPMed |
|
|
CA381586878 rs1477471317 |
597 | A>V | No |
ClinGen gnomAD |
|
|
rs1291278409 CA381586880 |
598 | A>T | No |
ClinGen TOPMed |
|
|
rs1188086312 CA381586905 |
598 | A>V | No |
ClinGen gnomAD |
|
|
rs199995618 CA381586945 |
601 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6147270 rs199995618 |
601 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6147272 rs766619297 |
602 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1590816220 CA381586971 |
603 | A>P | No |
ClinGen Ensembl |
|
|
rs1300141877 CA381586984 |
603 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA381587000 rs764109110 |
604 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6147274 rs764109110 |
604 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224209760 rs929393555 |
605 | S>G | No |
ClinGen TOPMed |
|
| TCGA novel | 605 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381587027 rs1382164195 |
605 | S>N | No |
ClinGen gnomAD |
|
|
rs1243069840 CA381587067 |
607 | L>P | No |
ClinGen gnomAD |
|
|
rs147580611 CA6147276 |
610 | F>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA224209782 rs374966103 |
614 | F>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1048224617 CA224209803 |
616 | F>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA381587310 rs1250308319 |
619 | S>T | No |
ClinGen gnomAD |
|
|
rs1421877519 CA381587376 |
621 | S>N | No |
ClinGen gnomAD |
|
|
CA224209817 rs890458493 |
621 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA6147280 rs779053640 |
623 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6147281 rs748503466 |
624 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA381587445 rs1380629407 |
624 | L>V | No |
ClinGen gnomAD |
|
|
CA6147284 rs370340623 |
626 | Y>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1855668626 RCV001228535 |
628 | R>missing | No |
ClinVar dbSNP |
|
|
rs201661352 CA224209840 |
628 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs369197157 CA6147286 |
628 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA224209842 rs895239701 |
629 | Q>E | No |
ClinGen Ensembl |
|
|
CA6147314 rs761750639 |
630 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA6147315 rs367697163 |
630 | E>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs773093690 CA6147316 |
631 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs760670339 CA6147317 |
632 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA381588690 rs1278836574 |
634 | A>D | No |
ClinGen gnomAD |
|
|
rs763119311 CA381588696 |
635 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1222653269 CA381588722 |
638 | V>G | No |
ClinGen gnomAD |
|
|
rs145538370 CA6147322 |
640 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6147323 rs757615984 |
643 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA381588783 rs1185247110 |
644 | V>E | No |
ClinGen gnomAD |
|
|
rs745312710 CA6147324 |
644 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750828204 CA6147325 |
650 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1424735626 CA381588865 |
652 | P>L | No |
ClinGen gnomAD |
|
|
CA224212998 rs1039628264 |
654 | H>N | No |
ClinGen TOPMed |
|
|
CA381588884 rs1480857464 |
654 | H>R | No |
ClinGen TOPMed |
|
|
CA381588876 rs1039628264 |
654 | H>Y | No |
ClinGen TOPMed |
|
|
rs779659562 CA6147327 |
655 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs560975163 CA6147328 |
657 | H>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs769231419 CA6147330 RCV000658611 |
658 | R>C | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA6147332 rs747971622 |
658 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769231419 CA6147331 |
658 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771700981 CA6147333 |
659 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381588935 rs1229818208 |
659 | H>Q | No |
ClinGen gnomAD |
|
|
rs771700981 CA381588928 |
659 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6147335 rs528045019 |
660 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs746874956 CA381588945 |
660 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770889100 CA6147337 |
661 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775514573 CA6147338 |
661 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381588956 rs1489283351 |
662 | R>C | No |
ClinGen gnomAD |
|
|
rs763065648 CA6147340 |
662 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs745846239 CA381588975 |
664 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745846239 CA6147342 |
664 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774622771 CA6147341 |
664 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1383705011 CA381588998 |
666 | R>M | No |
ClinGen gnomAD |
|
|
rs1443668367 CA381589007 |
667 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA224213048 rs1035345972 |
667 | P>T | No |
ClinGen Ensembl |
|
|
rs756549710 CA6147345 |
668 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381589033 rs1317637638 |
669 | D>E | No |
ClinGen gnomAD |
|
|
rs753385752 CA6147347 |
670 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6147348 rs753385752 |
670 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778574482 CA6147349 |
671 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1565163965 CA381589152 |
672 | E>K | No |
ClinGen Ensembl |
|
|
CA224213174 rs914510990 |
673 | E>K | No |
ClinGen TOPMed |
|
|
rs1269457075 CA381589258 |
677 | G>E | No |
ClinGen gnomAD |
|
|
rs748654590 CA6147370 |
677 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381589288 rs1393973727 |
678 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 680 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 682 | P>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1331796670 CA381589365 |
683 | D>A | No |
ClinGen gnomAD |
|
|
rs371004770 CA6147373 |
683 | D>H | No |
ClinGen ESP ExAC gnomAD |
|
|
CA224213198 rs550481991 |
684 | A>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM1356487 CA6147375 rs550481991 |
684 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
RCV000486632 rs1554999769 |
685 | S>missing | No |
ClinVar dbSNP |
|
|
rs769744202 CA6147376 |
685 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381589419 rs1219714069 |
686 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
CA381589440 rs1272321760 |
687 | N>K | No |
ClinGen gnomAD |
|
|
CA381589488 rs1194921647 |
690 | S>N | No |
ClinGen gnomAD |
|
|
rs748310767 CA6147378 |
690 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs930344541 CA381589519 |
692 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs930344541 CA224213219 |
692 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs894118567 CA224213233 |
697 | G>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 698 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1012603909 CA381589653 |
698 | G>A | No |
ClinGen gnomAD |
|
|
CA224213234 rs1012603909 |
698 | G>D | No |
ClinGen gnomAD |
|
|
CA381589685 rs760982478 |
700 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6147381 rs760982478 |
700 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771368616 CA6147382 |
702 | E>D | No |
ClinGen ExAC |
|
|
CA381589774 rs1322367444 |
704 | E>A | No |
ClinGen gnomAD |
|
|
CA6147383 rs777162856 |
704 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA381589769 rs1167628217 |
704 | E>Q | No |
ClinGen gnomAD |
|
|
rs200160870 CA6147385 |
706 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6147410 rs756005324 |
707 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA381589987 rs573002924 |
708 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs151127006 CA6147415 |
709 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6147414 rs151127006 |
709 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6147413 rs754898144 |
709 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs746227782 CA6147418 |
711 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA381590063 rs1590818348 |
712 | V>G | No |
ClinGen Ensembl |
|
|
CA381590054 rs1242757275 |
712 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1440457949 CA381590082 |
713 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs141095902 CA6147419 |
717 | A>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381590201 rs1362065863 |
717 | A>P | No |
ClinGen gnomAD |
|
|
rs141095902 CA6147420 |
717 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6147424 COSM931187 rs150260808 |
721 | I>T | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6147426 rs148921764 |
722 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA224213481 rs948504340 |
726 | G>A | No |
ClinGen Ensembl |
|
|
rs201017845 CA381590447 |
727 | C>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6147429 rs766150062 |
728 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs145723719 COSM1228784 CA6147428 |
728 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA224213506 rs200209146 |
730 | N>S | No |
ClinGen 1000Genomes |
|
|
rs754915625 CA6147431 |
731 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs754915625 CA381590523 |
731 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs765318969 CA6147432 |
731 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 732 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6147434 rs138305091 |
732 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381590579 rs1248534307 |
733 | S>F | No |
ClinGen gnomAD |
|
|
rs776862858 CA224213519 |
735 | L>P | No |
ClinGen Ensembl |
|
|
rs1432069667 CA381590639 |
736 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1344387953 CA381590650 |
737 | L>V | No |
ClinGen gnomAD |
|
|
CA6147440 rs769184155 |
741 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1420437252 CA381590850 |
745 | A>T | No |
ClinGen TOPMed |
|
|
rs1487087248 CA381590978 |
746 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA381590999 rs1444896718 |
748 | S>C | No |
ClinGen gnomAD |
|
|
rs1389957718 CA381591019 |
749 | E>K | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 753 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 753 | A>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6147471 rs762940517 |
754 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA6147472 rs764166086 |
755 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA6147475 rs766485756 |
756 | M>I | No |
ClinGen ExAC TOPMed |
|
|
CA6147474 rs760723665 |
756 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs750493196 CA6147473 |
756 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA6147476 rs142606750 |
757 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6147477 rs755217536 |
757 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381591194 rs142606750 |
757 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs779210926 CA6147479 |
758 | I>V | No |
ClinGen ExAC |
|
|
CA6147483 rs778205590 |
761 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 763 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381591340 rs1319255953 |
763 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA6147488 rs769598662 |
764 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6147487 rs374229841 |
764 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6147489 TCGA novel rs775393308 |
765 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen ExAC TOPMed gnomAD |
| TCGA novel | 765 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6147490 rs749143223 |
766 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs749143223 CA381591431 |
766 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1240877342 CA381591410 |
766 | V>M | No |
ClinGen gnomAD |
|
|
rs749982899 CA6147492 |
768 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381591486 rs1398908286 |
769 | A>T | No |
ClinGen gnomAD |
|
|
CA6147493 rs200683259 |
769 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381591541 rs1334689643 |
771 | V>G | No |
ClinGen TOPMed |
|
|
CA381591556 rs1590819299 |
772 | V>G | No |
ClinGen Ensembl |
|
|
rs765495869 CA6147497 |
773 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA6147499 rs758832305 |
774 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA6147501 rs377635476 |
778 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201370342 CA6147504 |
779 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381591723 rs1565165071 |
779 | A>V | No |
ClinGen Ensembl |
|
| TCGA novel | 781 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 781 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs370231613 CA6147509 |
783 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381591771 rs1176618015 |
783 | M>L | No |
ClinGen gnomAD |
|
| TCGA novel | 784 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6147510 rs774219477 |
784 | T>I | No |
ClinGen ExAC |
|
|
rs572954334 CA6147512 |
785 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 786 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1329759639 CA381591893 |
788 | L>V | No |
ClinGen gnomAD |
|
| rs1189520104 | 792 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381592021 rs1273855464 |
792 | E>K | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 792 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765444519 CA6147516 |
793 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA381592081 rs1437462228 |
793 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA381592092 rs1225851758 |
794 | L>H | No |
ClinGen gnomAD |
|
|
CA381592095 rs1225851758 |
794 | L>P | No |
ClinGen gnomAD |
|
|
CA224213806 rs1027201325 |
795 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs775626939 CA6147517 |
796 | A>V | No |
ClinGen ExAC gnomAD |
|
| rs1565165023 | 797 | F>L | No | Ensembl | |
|
rs764312517 CA6147519 COSM1356489 |
800 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs751983355 CA6147520 |
800 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs757671003 CA6147521 |
802 | R>Q | Variant assessed as Somatic; 4.729e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs377750765 CA224213825 |
804 | H>Q | No |
ClinGen Ensembl |
|
|
rs1057100315 CA224213887 |
807 | E>K | No |
ClinGen TOPMed |
|
|
rs1426622389 CA381592600 |
809 | Q>H | No |
ClinGen gnomAD |
|
|
rs753440883 CA6147546 |
809 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1162287088 CA381592622 |
810 | N>S | No |
ClinGen gnomAD |
|
|
CA224213895 rs1043254769 |
811 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA224213899 rs904593138 |
813 | Y>* | No |
ClinGen Ensembl |
|
|
CA6147549 rs778688282 |
816 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6147548 rs778688282 |
816 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1338749193 CA381592889 |
818 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs777562279 CA6147551 |
819 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs746896827 CA6147553 |
820 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs746896827 CA381592959 |
820 | L>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 821 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381593027 rs1222304995 |
822 | P>L | No |
ClinGen Ensembl |
|
|
rs1264287480 CA381593015 |
822 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1590819893 CA381593083 |
824 | T>P | No |
ClinGen Ensembl |
|
|
rs780073935 CA6147555 |
828 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA381593336 rs1243962399 |
831 | D>W | No |
ClinGen gnomAD |
1 associated diseases with Q13488
[MIM: 259700]: Osteopetrosis, autosomal recessive 1 (OPTB1)
A rare genetic disease characterized by abnormally dense bone, due to defective resorption of immature bone. Osteopetrosis occurs in two forms
Without disease ID
- A rare genetic disease characterized by abnormally dense bone, due to defective resorption of immature bone. Osteopetrosis occurs in two forms
No regional properties for Q13488
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q13488 | |||
12 GO annotations of cellular component
| Name | Definition |
|---|---|
| apical plasma membrane | The region of the plasma membrane located at the apical end of the cell. |
| endosome membrane | The lipid bilayer surrounding an endosome. |
| ficolin-1-rich granule membrane | The lipid bilayer surrounding a ficolin-1-rich granule. |
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| late endosome | A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center. |
| lysosomal membrane | The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| phagocytic vesicle membrane | The lipid bilayer surrounding a phagocytic vesicle. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| proton-transporting V-type ATPase complex | A proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across a concentration gradient. The resulting transmembrane electrochemical potential of H+ is used to drive a variety of (i) secondary active transport systems via H+-dependent symporters and antiporters and (ii) channel-mediated transport systems. The complex comprises a membrane sector (V0) that carries out proton transport and a cytoplasmic compartment sector (V1) that catalyzes ATP hydrolysis. V-type ATPases are found in the membranes of organelles such as vacuoles, endosomes, and lysosomes, and in the plasma membrane. |
| vacuolar proton-transporting V-type ATPase complex | A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen. |
| vacuolar proton-transporting V-type ATPase, V0 domain | The V0 domain of a proton-transporting V-type ATPase found in the vacuolar membrane. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATPase binding | Binding to an ATPase, any enzyme that catalyzes the hydrolysis of ATP. |
| proton-transporting ATPase activity, rotational mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism. |
40 GO annotations of biological process
| Name | Definition |
|---|---|
| apoptotic process | A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. |
| autophagosome assembly | The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm. |
| B cell differentiation | The process in which a precursor cell type acquires the specialized features of a B cell. A B cell is a lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity. |
| bone resorption | The process in which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products. |
| cellular calcium ion homeostasis | Any process involved in the maintenance of an internal steady state of calcium ions at the level of a cell. |
| cellular defense response | A defense response that is mediated by cells. |
| cellular response to cytokine stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus. |
| dentin mineralization | The process in which calcium salts are deposited into the calcareous tooth structure known as dentin. |
| enamel mineralization | The process in which calcium salts, mainly carbonated hydroxyapatite, are deposited in tooth enamel. |
| establishment of cell polarity | The specification and formation of anisotropic intracellular organization or cell growth patterns. |
| establishment of vesicle localization | The directed movement of a vesicle to a specific location. |
| gene expression | The process in which a gene's sequence is converted into a mature gene product (protein or RNA). This includes the production of an RNA transcript and its processing, translation and maturation for protein-coding genes. |
| hematopoietic stem cell homeostasis | Any biological process involved in the maintenance of the steady-state number of hematopoietic stem cells within a population of cells. |
| immunoglobulin mediated immune response | An immune response mediated by immunoglobulins, whether cell-bound or in solution. |
| inflammatory response | The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages. |
| lysosomal lumen acidification | Any process that reduces the pH of the lysosomal lumen, measured by the concentration of the hydrogen ion. |
| macroautophagy | The major inducible pathway for the general turnover of cytoplasmic constituents in eukaryotic cells, it is also responsible for the degradation of active cytoplasmic enzymes and organelles during nutrient starvation. Macroautophagy involves the formation of double-membrane-bounded autophagosomes which enclose the cytoplasmic constituent targeted for degradation in a membrane-bounded structure. Autophagosomes then fuse with a lysosome (or vacuole) releasing single-membrane-bounded autophagic bodies that are then degraded within the lysosome (or vacuole). Some types of macroautophagy, e.g. pexophagy, mitophagy, involve selective targeting of the targets to be degraded. |
| memory T cell activation | The change in morphology and behavior of a memory T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific. |
| optic nerve development | The process whose specific outcome is the progression of the optic nerve over time, from its formation to the mature structure. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain. |
| ossification | The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance. |
| osteoclast differentiation | The process in which a relatively unspecialized monocyte acquires the specialized features of an osteoclast. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue. |
| osteoclast proliferation | The multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue, which typically differentiates from monocytes. |
| pH reduction | Any process that reduces the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion. |
| phagosome acidification | Any process that reduces the pH of the phagosome, measured by the concentration of the hydrogen ion. |
| positive regulation of cell population proliferation | Any process that activates or increases the rate or extent of cell proliferation. |
| protein catabolic process in the vacuole | The chemical reactions and pathways resulting in the breakdown of a protein in the vacuole, usually by the action of vacuolar proteases. |
| protein localization to organelle | A process in which a protein is transported to, or maintained in, a location within an organelle. |
| proton transmembrane transport | The directed movement of a proton across a membrane. |
| regulation of gene expression | Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). |
| regulation of insulin secretion | Any process that modulates the frequency, rate or extent of the regulated release of insulin. |
| regulation of osteoblast differentiation | Any process that modulates the frequency, rate or extent of osteoblast differentiation. |
| regulation of proton transport | Any process that modulates the frequency, rate or extent of proton transport into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| response to silver ion | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silver ion stimulus. |
| retina development in camera-type eye | The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. |
| ruffle organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell. |
| T cell differentiation | The process in which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex. |
| T cell homeostasis | The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus. |
| T-helper 1 cell activation | The change in morphology and behavior of a T-helper 1 cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific. |
| tooth eruption | The tooth development process in which the teeth enter the mouth and become visible. |
| vacuolar acidification | Any process that reduces the pH of the vacuole, measured by the concentration of the hydrogen ion. |
16 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P32563 | VPH1 | V-type proton ATPase subunit a, vacuolar isoform | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q29466 | ATP6V0A1 | V-type proton ATPase 116 kDa subunit a 1 | Bos taurus (Bovine) | PR |
| O97681 | ATP6V0A2 | V-type proton ATPase 116 kDa subunit a 2 | Bos taurus (Bovine) | PR |
| Q9I8D0 | ATP6V0A1 | V-type proton ATPase 116 kDa subunit a 1 | Gallus gallus (Chicken) | PR |
| Q9HBG4 | ATP6V0A4 | V-type proton ATPase 116 kDa subunit a 4 | Homo sapiens (Human) | PR |
| Q9Y487 | ATP6V0A2 | V-type proton ATPase 116 kDa subunit a 2 | Homo sapiens (Human) | PR |
| Q93050 | ATP6V0A1 | V-type proton ATPase 116 kDa subunit a 1 | Homo sapiens (Human) | PR |
| P15920 | Atp6v0a2 | V-type proton ATPase 116 kDa subunit a 2 | Mus musculus (Mouse) | PR |
| Q920R6 | Atp6v0a4 | V-type proton ATPase 116 kDa subunit a 4 | Mus musculus (Mouse) | PR |
| Q9Z1G4 | Atp6v0a1 | V-type proton ATPase 116 kDa subunit a 1 | Mus musculus (Mouse) | PR |
| P25286 | Atp6v0a1 | V-type proton ATPase 116 kDa subunit a 1 | Rattus norvegicus (Rat) | PR |
| P30628 | unc-32 | V-type proton ATPase 116 kDa subunit a 1 | Caenorhabditis elegans | PR |
| Q8RWZ7 | VHA-a1 | V-type proton ATPase subunit a1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SJT7 | VHA-a2 | V-type proton ATPase subunit a2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8W4S4 | VHA-a3 | V-type proton ATPase subunit a3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| A1A5G6 | atp6v0a1 | V-type proton ATPase 116 kDa subunit a 1 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGSMFRSEEV | ALVQLFLPTA | AAYTCVSRLG | ELGLVEFRDL | NASVSAFQRR | FVVDVRRCEE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LEKTFTFLQE | EVRRAGLVLP | PPKGRLPAPP | PRDLLRIQEE | TERLAQELRD | VRGNQQALRA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| QLHQLQLHAA | VLRQGHEPQL | AAAHTDGASE | RTPLLQAPGG | PHQDLRVNFV | AGAVEPHKAP |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ALERLLWRAC | RGFLIASFRE | LEQPLEHPVT | GEPATWMTFL | ISYWGEQIGQ | KIRKITDCFH |
| 250 | 260 | 270 | 280 | 290 | 300 |
| CHVFPFLQQE | EARLGALQQL | QQQSQELQEV | LGETERFLSQ | VLGRVLQLLP | PGQVQVHKMK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| AVYLALNQCS | VSTTHKCLIA | EAWCSVRDLP | ALQEALRDSS | MEEGVSAVAH | RIPCRDMPPT |
| 370 | 380 | 390 | 400 | 410 | 420 |
| LIRTNRFTAS | FQGIVDAYGV | GRYQEVNPAP | YTIITFPFLF | AVMFGDVGHG | LLMFLFALAM |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VLAENRPAVK | AAQNEIWQTF | FRGRYLLLLM | GLFSIYTGFI | YNECFSRATS | IFPSGWSVAA |
| 490 | 500 | 510 | 520 | 530 | 540 |
| MANQSGWSDA | FLAQHTMLTL | DPNVTGVFLG | PYPFGIDPIW | SLAANHLSFL | NSFKMKMSVI |
| 550 | 560 | 570 | 580 | 590 | 600 |
| LGVVHMAFGV | VLGVFNHVHF | GQRHRLLLET | LPELTFLLGL | FGYLVFLVIY | KWLCVWAARA |
| 610 | 620 | 630 | 640 | 650 | 660 |
| ASAPSILIHF | INMFLFSHSP | SNRLLYPRQE | VVQATLVVLA | LAMVPILLLG | TPLHLLHRHR |
| 670 | 680 | 690 | 700 | 710 | 720 |
| RRLRRRPADR | QEENKAGLLD | LPDASVNGWS | SDEEKAGGLD | DEEEAELVPS | EVLMHQAIHT |
| 730 | 740 | 750 | 760 | 770 | 780 |
| IEFCLGCVSN | TASYLRLWAL | SLAHAQLSEV | LWAMVMRIGL | GLGREVGVAA | VVLVPIFAAF |
| 790 | 800 | 810 | 820 | ||
| AVMTVAILLV | MEGLSAFLHA | LRLHWVEFQN | KFYSGTGYKL | SPFTFAATDD |