P50443
Gene name |
SLC26A2 (DTD, DTDST) |
Protein name |
Sulfate transporter |
Names |
Diastrophic dysplasia protein, Solute carrier family 26 member 2 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:1836 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for P50443
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 7XLM | EM | 373 A | A/B | 1-739 | PDB |
| AF-P50443-F1 | Predicted | AlphaFoldDB |
675 variants for P50443
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1554095084 RCV000665913 |
1 | M>I | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001247326 rs1459144096 RCV002241565 |
5 | S>missing | Achondrogenesis, type IB Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
CA263266 rs386833505 RCV000049433 |
16 | S>* | Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000049435 RCV001853039 rs386833507 CA263272 RCV000780714 |
19 | G>* | Achondrogenesis, type ib (acg1b) Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Diastrophic dysplasia [Ensembl, ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1554095097 RCV000671306 |
21 | D>missing | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1755018682 RCV001238172 |
47 | Q>missing | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001828598 RCV001193471 rs1265764649 |
49 | R>missing | Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1755018969 RCV001296270 |
50 | P>L | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
COSM1064217 CA216019 RCV000054570 RCV001271550 RCV001069051 rs369318758 |
58 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium Achondrogenesis, type IB [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000411463 RCV000409043 rs1057517523 RCV000410073 CA16040984 RCV000409914 |
62 | S>* | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1057517496 RCV000411718 RCV000410879 RCV000409732 RCV000412405 |
63 | D>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000410474 RCV000409375 RCV000409102 rs1057517462 RCV000411549 |
69 | F>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001347952 rs1204857377 RCV001825944 |
76 | K>missing | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000398136 RCV001154972 RCV001154974 RCV001154973 RCV000539759 CA3505223 RCV001812767 rs76784312 RCV001154133 RCV000987616 |
77 | N>H | Atelosteogenesis type II Achondrogenesis, type ib (acg1b) Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar, Ensembl] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1755020578 RCV001253229 |
79 | Q>* | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1057517504 RCV000411597 RCV000410521 RCV000409029 RCV000409666 RCV001382282 |
82 | P>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
rs386833502 RCV000049430 |
87 | N>missing | Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001156641 rs771569066 RCV001154977 RCV001154978 RCV001154975 RCV001154976 CA3505227 |
94 | P>S | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001007924 rs1581230727 |
100 | P>missing | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000673496 rs1554095125 |
109 | L>missing | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1554095126 RCV000673694 |
110 | G>VG | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs386833503 RCV000049431 CA263260 |
111 | D>Y | Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs875989951 RCV000211636 CA10576339 |
125 | Q>L | Atelosteogenesis type II [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000668759 CA361704888 rs1554095137 |
129 | Y>* | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000410549 RCV000411386 RCV000004304 RCV000409927 rs786200881 RCV001851639 |
131 | L>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
CA252998 RCV000004316 rs267607055 |
133 | A>V | Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000049432 RCV000798188 rs386833504 CA263263 |
135 | Q>K | Achondrogenesis, type IB Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000673763 rs769859976 RCV001215180 |
146 | F>missing | Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs769859976 RCV000813006 |
147 | A>missing | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000780715 rs786204675 RCV000169481 RCV001850400 |
151 | Y>missing | Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs143658243 CA3505255 RCV001329030 |
158 | R>H | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000411337 RCV000410244 rs763198695 RCV000411191 RCV001041550 RCV000780713 RCV000409216 |
162 | V>missing | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
CA263269 RCV000049434 rs386833506 |
166 | G>R | Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1554095145 RCV000669407 |
167 | V>missing | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs104893919 RCV001030754 CA259839 RCV000412934 RCV000004310 RCV000023568 RCV000175526 RCV000411745 RCV000690242 RCV000590163 RCV000779467 |
178 | R>* | 3MC syndrome 2 Atelosteogenesis type II Achondrogenesis, type ib (acg1b) Sulfate transporter-related osteochondrodysplasia 3mc syndrome 2 (3mc2) Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia SLC26A2-Related Disorders [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA3505268 RCV001836320 RCV001327865 rs747117439 |
178 | R>Q | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1057517483 RCV000411159 RCV000409182 RCV000410110 CA16040988 RCV000412066 |
181 | Q>* | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1554095154 RCV000668851 RCV001861770 |
192 | P>* | Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000673374 CA361705356 rs1554095156 |
204 | L>* | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1554095167 RCV000674939 |
215 | S>missing | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001083640 RCV000296419 CA3505288 RCV000601970 rs35919114 RCV000387970 RCV000382551 RCV000344323 RCV002278585 RCV000290481 RCV001812898 |
219 | I>V | Connective tissue disorder Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001156642 RCV001151177 rs75097996 RCV002070828 RCV001151175 RCV001151176 CA3505292 RCV001156643 |
232 | Y>F | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000811272 rs1429562386 CA361705546 |
233 | Q>* | Achondrogenesis, type ib (acg1b) Achondrogenesis, type IB [Ensembl, ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001578821 COSM149990 rs777906405 RCV000756642 RCV001578822 RCV001578823 RCV001578824 CA3505311 RCV002533794 |
235 | A>V | Atelosteogenesis type II endometrium Achondrogenesis, type IB stomach Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV002514249 rs386833508 RCV000049437 |
236 | M>missing | Achondrogenesis, type IB Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
rs758186195 CA3505313 RCV001277839 |
237 | G>S | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001154240 RCV001154238 rs1228615816 RCV001154236 RCV001154239 CA361706096 RCV001154237 |
237 | G>V | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001830283 rs746734591 RCV001314538 CA3505315 RCV001810723 |
238 | F>V | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1755069507 RCV001341511 |
240 | Q>E | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000410335 RCV001861404 RCV000411764 RCV000411172 RCV000409205 rs1057517524 |
246 | V>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000756643 rs768745973 RCV001835949 CA3505316 |
247 | Y>C | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA16040991 RCV000409471 RCV000410567 RCV000411690 rs1057517514 RCV000409703 |
249 | S>* | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA252992 rs104893917 VAR_007434 RCV000004308 RCV000675076 RCV001851640 |
255 | G>E | Atelosteogenesis type II Achondrogenesis, type ib (acg1b) Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 AO2; significant loss of sulfate transport [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt ESP TOPMed dbSNP gnomAD |
|
RCV000667661 CA361706227 RCV002530719 VAR_066835 rs1419613966 |
256 | F>S | Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 EDM4 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
RCV002532114 rs769319202 CA3505319 RCV002531295 RCV000671782 |
259 | G>V | Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV002282170 RCV000700530 CA3505321 RCV001154241 rs114260147 RCV001154243 RCV001155088 RCV001155089 RCV001154242 RCV000489445 |
261 | S>C | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000368363 rs886060223 RCV000263261 CA10623451 RCV000298580 RCV000311380 RCV000355502 |
265 | L>F | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs199789515 CA3505323 RCV000664792 |
266 | T>I | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs750882937 RCV001204217 |
275 | L>missing | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000004306 RCV001030752 RCV000641290 RCV000999764 CA252990 RCV000266165 RCV000586600 RCV000624686 RCV001030753 VAR_007435 rs104893915 RCV002276530 RCV000275762 RCV000004307 RCV000004305 |
279 | R>W | Connective tissue disorder 3MC syndrome 2 Atelosteogenesis type II Achondrogenesis, type ib (acg1b) Sulfate transporter-related osteochondrodysplasia 3mc syndrome 2 (3mc2) Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Inborn genetic diseases SLC26A2-Related Disorders Diastrophic dysplasia AO2 and EDM4; reduced sulfate transport; significant reduction in sulfate-oxalate exchange activity; no effect on cell membrane localization [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1755073505 RCV001151297 RCV001156742 RCV001156744 RCV001156741 RCV001156743 |
281 | N>H | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002559460 RCV001151298 RCV001151302 rs571410872 RCV001151299 RCV001151300 RCV001151301 CA129083833 |
282 | G>C | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Inborn genetic diseases Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000366406 RCV001859600 rs571410872 CA3505334 |
282 | G>R | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000666178 rs1225601391 |
289 | T>* | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1025069199 RCV001825601 CA129083884 RCV000807178 |
298 | H>N | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000049438 rs386833509 |
302 | L>* | Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1057517526 RCV000409922 RCV000410085 RCV000411035 RCV000412037 |
307 | T>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1057517495 RCV001782880 RCV000409603 RCV000410472 RCV000411979 RCV000410703 |
308 | S>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000672806 rs1554095296 |
309 | L>missing | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs377432261 RCV001378389 CA3505355 RCV000998468 |
311 | C>R | Variant assessed as Somatic; 0.0 impact. Achondrogenesis, type IB [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA dbSNP gnomAD |
| VAR_007436 | 340 | V>del | ACG1B; reduced sulfate transport; loss of cell membrane localization [UniProt] | Yes | UniProt |
|
RCV001004172 rs121908077 RCV000355352 RCV000586327 RCV000055756 RCV001810418 RCV001050109 RCV000023571 |
341 | V>missing | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000665125 rs1554095304 |
343 | A>missing | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA3505378 RCV000765823 RCV000312752 RCV000591740 RCV000338459 rs114212275 RCV000399511 RCV000281048 RCV000390859 |
349 | F>Y | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA3505379 rs758078719 RCV001825982 RCV001352588 |
353 | H>Y | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA16040994 RCV000410579 RCV000410391 rs1057517532 RCV000411229 RCV000409259 RCV001218289 |
354 | E>* | Atelosteogenesis type II Variant assessed as Somatic; impact. Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
RCV000390686 rs139051143 RCV001156842 RCV002278323 RCV001156841 RCV001155191 RCV001155192 RCV001155190 RCV000705851 CA3505383 |
361 | A>T | Connective tissue disorder Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000049421 CA263247 RCV001388086 rs386833493 |
386 | A>V | Achondrogenesis, type IB Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA243100 RCV002516719 RCV000176985 rs794727476 |
393 | G>D | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs201714602 CA3505409 RCV000805701 RCV003166250 |
412 | V>I | Achondrogenesis, type IB Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs386833494 RCV000049422 |
415 | N>missing | Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
rs374309119 RCV000405737 RCV000307340 RCV000272149 RCV000364384 CA3505410 RCV002520337 RCV000370170 |
418 | M>V | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000055757 VAR_007437 RCV001851641 CA259842 rs104893920 RCV000023569 |
425 | N>D | Achondrogenesis, type ib (acg1b) Achondrogenesis, type IB Diastrophic dysplasia ACG1B; significant loss of sulfate transport [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000410215 RCV000411307 rs1057517471 RCV000412220 RCV000411541 |
438 | A>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000410772 RCV000409624 RCV000411621 rs1057517502 RCV000411028 |
447 | E>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001036925 rs771098555 CA3505424 |
448 | S>* | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA361707702 rs1255485754 RCV001323481 |
452 | H>R | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000004311 rs104893921 CA116646 VAR_018654 RCV000055758 |
454 | Q>P | Diastrophic dysplasia, broad bone-platyspondylic variant Diastrophic dysplasia diatrophic dysplasia; broad bone-platyspondylic variant; no effect on sulfate transport and cell membrane localization [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000049423 RCV000410056 RCV000412478 RCV000410943 rs386833495 |
465 | L>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
rs886060224 RCV000323851 RCV000371545 RCV000358575 CA10619657 RCV000329494 RCV000266212 |
468 | L>F | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs780990131 RCV001234308 |
474 | L>missing | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001326550 CA3505435 rs145765282 RCV001277840 |
476 | Y>C | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001062264 rs1755089179 |
478 | L>missing | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000673168 RCV001382581 rs745774620 |
481 | S>missing | Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000049424 CA263252 rs386833496 |
484 | G>D | Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
CA202198 RCV000401654 rs78676079 RCV001573204 RCV000055759 RCV000169071 RCV000352511 RCV000407142 RCV000525040 RCV002277136 RCV000176980 |
492 | R>W | Connective tissue disorder Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA129084421 RCV000354703 RCV000367416 CA3505452 RCV000407213 RCV000259647 RCV001084518 RCV000361664 RCV000299908 rs76668544 |
504 | M>I | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen 1000Genomes ExAC TOPMed gnomAD ClinVar dbSNP |
|
RCV000004314 CA116649 RCV002512749 RCV000004315 rs121908078 |
512 | T>K | De la Chapelle dysplasia Achondrogenesis, type IB Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000410828 RCV000409864 rs1057517511 RCV000412349 RCV001850977 RCV000409678 |
514 | I>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
CA361708139 RCV000761587 rs1561822760 |
522 | S>F | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000665555 rs1554095356 |
533 | V>missing | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000667087 rs769657401 |
536 | C>missing | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs762087746 RCV001156956 CA3505465 RCV001156959 RCV001156960 RCV001156958 RCV001156957 |
537 | F>L | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001242692 rs1755093032 |
542 | V>missing | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001151532 RCV001156963 CA3505468 rs200897133 RCV001156962 RCV002557267 RCV001156961 RCV001151533 |
545 | R>C | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA3505469 RCV001246134 RCV001829980 rs745802790 |
545 | R>H | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000411088 RCV000409746 rs1057517482 RCV000409538 RCV000412144 |
550 | K>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001577836 RCV002509193 rs386833497 RCV000641291 RCV000049425 RCV000305551 RCV001826705 RCV000169577 |
551 | S>missing | Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 SLC26A2-Related Disorders Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1755094376 RCV001193470 RCV001390701 |
552 | S>* | Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000588352 RCV000809074 rs766836061 CA361708540 |
569 | Y>* | Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs30832 RCV000360315 RCV000320835 CA202204 VAR_058415 RCV000176982 RCV000271433 RCV001522246 RCV000384666 RCV000589115 RCV000265444 RCV002277383 |
574 | I>T | Connective tissue disorder Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs386833498 RCV000817526 RCV000023567 RCV000004302 RCV000004303 RCV002276529 RCV000586135 |
575 | K>missing | Connective tissue disorder Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
CA3505483 RCV000380779 RCV000350699 rs142542254 RCV000386532 RCV000326566 RCV000295676 RCV000698655 |
582 | R>C | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001155385 rs368864462 RCV001155382 RCV002558347 RCV001155383 RCV001155384 CA3505484 RCV001155386 |
582 | R>H | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA361708728 RCV001855439 RCV000665350 rs1554095364 |
588 | Y>* | Achondrogenesis, type ib (acg1b) Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 [Ensembl, ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs905644652 RCV001212481 |
593 | E>* | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001151619 RCV001151622 RCV001151623 RCV001151620 RCV002559461 RCV001151621 CA361708784 rs1387357203 |
596 | K>E | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV002524629 RCV000412069 rs1057517530 RCV000411101 RCV000409656 RCV000410954 |
603 | T>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1554095374 RCV001855528 RCV000669769 |
606 | P>missing | Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA3505498 RCV001343906 rs767618201 |
606 | P>T | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1554095381 RCV000674679 |
620 | K>missing | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001223969 rs1755100270 |
627 | T>missing | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000665365 rs1253691463 CA361709384 |
641 | H>R | Variant assessed as Somatic; 0.0 impact. Multiple epiphyseal dysplasia type 4 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
|
rs1481910744 RCV000674639 RCV001855612 |
644 | L>missing | Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001236938 rs774648833 |
651 | I>missing | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001850976 RCV000410934 RCV000411814 RCV000412444 rs1057517474 RCV000409824 |
652 | D>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000666540 rs1554095395 |
653 | C>missing | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000224702 RCV000477884 RCV000411019 RCV002276531 VAR_018655 RCV000004313 RCV000409936 RCV001813733 RCV000055760 rs104893924 RCV000780712 CA252996 RCV001030750 |
653 | C>S | Connective tissue disorder 3MC syndrome 2 Atelosteogenesis type II Achondrogenesis, type ib (acg1b) Sulfate transporter-related osteochondrodysplasia 3mc syndrome 2 (3mc2) Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 SLC26A2-Related Disorders Diastrophic dysplasia EDM4; no effect on sulfate transport and cell membrane localization [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs386833499 RCV000409521 RCV000411069 RCV000049427 RCV000411727 |
658 | F>* | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000410080 RCV001389674 RCV000410977 rs762137330 RCV000412036 RCV000411126 |
661 | T>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000049428 rs386833500 |
662 | A>missing | Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000665405 RCV001175534 RCV001835070 RCV000779468 RCV001388087 CA361709574 rs1554095397 |
663 | G>R | Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 SLC26A2-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs141798540 RCV002531294 RCV000671750 CA3505527 |
665 | H>P | Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000411563 RCV000409121 RCV000410720 RCV000410103 rs1057517513 |
667 | L>missing | Atelosteogenesis type II Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001832414 rs772515802 RCV001043459 |
673 | D>missing | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
CA3505535 RCV003114507 RCV000272793 RCV000303457 RCV000309144 RCV002520338 RCV000391865 rs772655429 RCV000358288 |
674 | Y>C | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA259844 rs104893916 RCV000055761 VAR_007438 RCV000169017 RCV000023570 |
678 | G>V | Achondrogenesis, type ib (acg1b) Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia ACG1B; reduced sulfate transport; loss of cell membrane localization [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs1755104737 RCV001323399 |
681 | V>D | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
CA361709714 RCV001007861 rs1581232671 |
686 | C>Y | Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
VAR_020402 RCV000334149 RCV000363939 RCV000269354 RCV000588132 RCV000388712 RCV002277137 rs3776070 RCV000055762 CA202201 RCV000176981 RCV001513704 |
689 | T>S | Connective tissue disorder Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001255525 rs1755106202 |
690 | V>missing | Sulfate transporter-related osteochondrodysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
rs746291695 RCV001323097 |
690 | V>M | Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
CA3505551 RCV000324346 RCV001707611 rs34351171 RCV001271508 RCV000956326 |
696 | N>S | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs761932822 CA361709796 RCV000670801 |
699 | Y>* | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000049429 rs386833501 |
707 | L>missing | Diastrophic dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000665670 rs1554095431 |
708 | L>missing | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000501791 RCV001778980 RCV001857164 rs1554095433 |
709 | F>missing | Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000330490 RCV000336484 rs374692915 RCV000372485 RCV001439481 RCV000281557 RCV000376030 CA3505558 |
710 | Y>C | Atelosteogenesis type II Sulfate transporter-related osteochondrodysplasia Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 Diastrophic dysplasia [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000004309 RCV000675095 RCV000797878 rs104893918 CA252994 VAR_007439 |
715 | A>V | Atelosteogenesis type II Achondrogenesis, type ib (acg1b) Variant assessed as Somatic; 4.69e-05 impact. Achondrogenesis, type IB Multiple epiphyseal dysplasia type 4 AO2 and EDM4; no effect on sulfate transport and cell membrane localization [ClinVar, Ensembl, NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001271509 CA3505564 rs565149029 RCV000806427 |
722 | S>P | Achondrogenesis, type IB [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA3505571 RCV000666821 rs747357127 |
740 | D>K | Multiple epiphyseal dysplasia type 4 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1238936538 CA361703761 |
2 | S>F | No |
ClinGen gnomAD |
|
|
rs779722346 CA3505185 |
5 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1473390687 CA361703795 |
7 | E>G | No |
ClinGen gnomAD |
|
|
CA361703791 rs1390775746 |
7 | E>K | No |
ClinGen TOPMed |
|
|
CA3505188 rs151076648 |
9 | H>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374715321 CA361703808 |
9 | H>P | No |
ClinGen ESP TOPMed |
|
|
rs374715321 CA129082168 |
9 | H>R | No |
ClinGen ESP TOPMed |
|
|
CA129082160 rs151076648 |
9 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770366919 CA3505191 |
11 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA3505192 rs763171087 |
11 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs770366919 CA3505190 |
11 | V>I | Variant assessed as Somatic; 4.628e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs766531442 CA3505193 |
13 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs766531442 CA361703833 |
13 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1245396440 CA361703842 |
15 | D>H | No |
ClinGen gnomAD |
|
|
rs1245396440 CA361703843 |
15 | D>Y | No |
ClinGen gnomAD |
|
|
CA361703853 rs386833505 |
16 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA129082201 rs767351999 |
22 | S>I | No |
ClinGen TOPMed |
|
|
rs767351999 CA361703892 |
22 | S>N | No |
ClinGen TOPMed |
|
|
CA3505194 rs774777482 |
23 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA361703908 rs1247794843 |
24 | P>L | No |
ClinGen gnomAD |
|
|
CA129082207 rs750742962 |
25 | S>C | No |
ClinGen Ensembl |
|
|
RCV000054573 CA216028 rs387907491 |
27 | I>M | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA3505197 rs753669585 |
27 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361703932 rs1443550023 |
28 | H>Q | No |
ClinGen gnomAD |
|
|
CA361703940 rs1479232044 |
30 | E>K | No |
ClinGen gnomAD |
|
|
CA129082222 rs978424390 |
32 | Q>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361703980 rs1171774561 |
34 | E>D | No |
ClinGen gnomAD |
|
|
rs750331388 CA3505200 |
36 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1165698640 CA361704008 |
37 | T>A | No |
ClinGen gnomAD |
|
|
CA3505201 rs757970578 |
38 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376023150 CA3505204 |
39 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746468036 CA3505203 |
39 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505205 rs780672012 |
40 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA3505206 rs748570555 |
41 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA3505207 rs770030403 |
42 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1250888818 CA361704077 |
43 | E>V | No |
ClinGen gnomAD |
|
|
CA361704086 rs1345804076 |
44 | T>A | No |
ClinGen gnomAD |
|
|
CA3505208 rs773892702 |
45 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA361704131 rs1194896006 |
47 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1190567620 CA361704182 |
52 | H>R | No |
ClinGen gnomAD |
|
|
rs771193050 CA3505210 |
52 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3505211 rs774585651 |
53 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA129082259 rs766615254 |
53 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs767810188 CA3505214 |
56 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1433995701 CA361704221 |
56 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3505215 rs369318758 |
58 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs199893058 CA3505216 |
58 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1755019690 RCV001090374 |
63 | D>G | No |
ClinVar dbSNP |
|
|
CA3505217 rs755049614 |
65 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200981220 CA3505218 |
66 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA3505219 rs766241120 |
67 | K>* | No |
ClinGen ExAC gnomAD |
|
|
rs751114545 CA3505220 |
68 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA129082299 rs868242956 |
70 | V>A | No |
ClinGen gnomAD |
|
|
rs1217971274 CA361704377 |
70 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs747452414 CA129082300 |
71 | I>T | No |
ClinGen Ensembl |
|
|
rs1479713112 CA361704394 |
72 | K>* | No |
ClinGen TOPMed |
|
|
rs756565445 CA3505224 |
78 | C>W | No |
ClinGen ExAC |
|
|
CA361704596 rs1204157806 |
88 | M>I | No |
ClinGen TOPMed |
|
|
rs778265659 CA3505225 |
88 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361704607 rs1200428645 |
89 | I>S | No |
ClinGen gnomAD |
|
|
rs749607301 CA361704628 |
91 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505226 rs749607301 |
91 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779521717 CA3505228 |
96 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA361704674 rs1581230719 |
97 | Q>R | No |
ClinGen Ensembl |
|
|
CA3505230 rs772015926 |
98 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs753193118 CA3505229 |
98 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361704689 rs1288028600 |
99 | L>P | No |
ClinGen gnomAD |
|
|
rs760795343 CA361704694 |
100 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505232 rs760795343 |
100 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505231 rs775850228 |
100 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA361704711 rs1370328907 |
103 | D>N | No |
ClinGen gnomAD |
|
|
CA361704731 rs1315598449 |
105 | K>N | No |
ClinGen gnomAD |
|
| TCGA novel | 105 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001200175 rs1755022481 |
106 | K>E | No |
ClinVar dbSNP |
|
|
CA3505236 rs762699479 |
113 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA361704799 rs766328991 |
115 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505237 rs766328991 |
115 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1488632635 CA361704828 |
120 | I>L | No |
ClinGen gnomAD |
|
|
CA3505238 rs751431865 |
124 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1219390670 CA361704858 |
125 | Q>* | No |
ClinGen TOPMed |
|
|
CA129082385 rs875989951 |
125 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1178654243 CA361704865 COSM1664197 |
126 | S>P | kidney [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA3505239 rs759123374 |
127 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA361704872 rs1350762980 |
127 | I>V | No |
ClinGen gnomAD |
|
|
CA3505240 rs116658823 |
128 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs752449028 CA3505241 |
133 | A>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 136 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361704922 rs1277394379 |
136 | E>K | No |
ClinGen gnomAD |
|
|
rs755837989 CA3505242 |
137 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1172010266 CA361704946 |
139 | Y>C | No |
ClinGen TOPMed |
|
|
CA361704952 rs1163055267 |
140 | G>D | No |
ClinGen gnomAD |
|
|
rs777500286 CA3505243 |
141 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA3505246 rs779516281 |
143 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA361704967 rs1333398085 |
143 | T>P | No |
ClinGen gnomAD |
|
|
rs1561819566 CA361704975 |
144 | S>Y | No |
ClinGen Ensembl |
|
| rs769859976 | 146 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs769859976 | 147 | A>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3505248 rs201012489 |
147 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3505249 rs772253189 |
150 | I>V | No |
ClinGen ExAC |
|
|
rs780011803 CA3505250 |
154 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA361705051 rs1165606456 |
155 | G>D | No |
ClinGen Ensembl |
|
|
rs1581230819 CA361705055 |
156 | T>A | No |
ClinGen Ensembl |
|
|
rs747048231 CA129082524 |
156 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747048231 CA3505251 |
156 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505253 rs776787689 |
157 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs762787339 CA3505254 |
158 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs143658243 CA361705065 |
158 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs767426216 CA3505258 |
160 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505261 rs760221585 |
162 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA3505260 rs752152305 |
162 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA3505262 rs763859822 |
163 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA3505263 rs377008976 |
164 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1461986353 CA361705115 |
167 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1461986353 CA361705117 |
167 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361705125 rs1381904339 |
168 | L>P | No |
ClinGen gnomAD |
|
|
rs1320154597 CA361705133 |
169 | C>* | No |
ClinGen TOPMed |
|
|
CA3505266 rs370282677 |
171 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765507342 CA3505265 |
171 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505267 rs758834024 |
172 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755031722 CA3505269 |
179 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1405775233 CA361705213 |
182 | K>R | No |
ClinGen TOPMed |
|
|
CA361705219 rs1332689655 |
183 | A>P | No |
ClinGen TOPMed |
|
|
rs781435231 CA3505270 |
184 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs553523153 CA3505272 |
185 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3505274 rs745606637 |
186 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA3505275 rs146895291 |
187 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1184686405 CA361705244 |
187 | N>Y | No |
ClinGen gnomAD |
|
|
CA3505276 rs775447660 |
189 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1428011747 CA361705257 |
189 | H>Y | No |
ClinGen gnomAD |
|
|
CA3505277 rs760309344 |
190 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361705263 rs760309344 |
190 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1433374524 CA361705264 |
190 | S>N | No |
ClinGen gnomAD |
|
|
rs904089013 CA129082669 |
191 | A>S | No |
ClinGen TOPMed |
|
|
rs763693887 COSM285053 CA3505279 |
191 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA361705280 rs1238535863 |
193 | S>P | No |
ClinGen TOPMed |
|
|
rs1402162343 CA361705287 |
194 | L>* | No |
ClinGen gnomAD |
|
|
rs1271577788 CA361705293 CA361705294 |
195 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3505280 rs578187253 |
199 | N>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs761571108 CA3505281 |
200 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA361705332 rs1350029034 |
201 | S>G | No |
ClinGen gnomAD |
|
|
rs750787549 CA3505283 |
206 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3505282 rs764878581 |
206 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 207 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361705379 rs1488498989 |
208 | S>P | No |
ClinGen gnomAD |
|
|
CA3505284 rs372226382 |
209 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361705397 rs867540010 |
210 | R>S | No |
ClinGen gnomAD |
|
|
rs766847788 CA129082731 |
211 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766847788 CA3505285 |
211 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA129082733 rs545719885 |
212 | C>F | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA361705405 rs1302314516 |
212 | C>S | No |
ClinGen gnomAD |
|
|
CA3505286 rs752034415 |
214 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs377095681 CA3505287 |
217 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA129082739 rs991566867 |
220 | M>V | No |
ClinGen TOPMed |
|
|
rs563310012 CA129082741 |
221 | V>I | No |
ClinGen Ensembl |
|
|
rs748164269 CA3505289 |
223 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
COSM1542726 rs1402826221 CA361705486 |
223 | S>R | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1561819975 CA361705494 |
225 | V>I | No |
ClinGen Ensembl |
|
|
rs1554095170 CA3505290 |
231 | V>I | No |
ClinGen Ensembl |
|
|
rs1581230984 CA361705538 |
232 | Y>D | No |
ClinGen Ensembl |
|
| rs774842972 | 232 | Y>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA129083667 rs908660430 |
236 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs982879554 CA129083662 |
236 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs113043757 CA129083697 |
239 | F>L | No |
ClinGen Ensembl |
|
|
CA361706121 rs1213183312 |
241 | V>M | No |
ClinGen gnomAD |
|
|
rs1409549241 CA361706140 |
243 | F>L | No |
ClinGen TOPMed |
|
|
CA361706141 rs1175035390 |
244 | V>I | No |
ClinGen TOPMed |
|
|
rs1197895795 CA361706155 |
246 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3505317 rs781230263 |
248 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA361706177 rs1224220784 |
250 | D>H | No |
ClinGen TOPMed |
|
|
CA361706186 rs1232744908 |
251 | A>S | No |
ClinGen gnomAD |
|
|
rs1489803920 CA361706194 |
252 | L>W | No |
ClinGen TOPMed |
|
|
rs1216415565 CA361706200 |
253 | L>P | No |
ClinGen TOPMed |
|
|
CA361706205 rs1190457980 |
254 | S>N | No |
ClinGen gnomAD |
|
|
rs1581231608 CA361706208 |
254 | S>R | No |
ClinGen Ensembl |
|
|
rs769319202 CA361706263 |
259 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505320 rs772809990 |
260 | A>V | No |
ClinGen ExAC |
|
|
CA361706301 rs1442719336 |
263 | T>I | No |
ClinGen gnomAD |
|
|
CA361706300 rs1442719336 |
263 | T>S | No |
ClinGen gnomAD |
|
|
CA129083756 rs754511601 |
264 | I>V | No |
ClinGen Ensembl |
|
|
CA361706317 rs199789515 |
266 | T>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 270 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1043371043 CA129083779 |
272 | L>F | No |
ClinGen Ensembl |
|
|
CA361706358 rs1389031689 |
272 | L>R | No |
ClinGen TOPMed |
|
|
CA3505329 rs760707226 |
275 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753803965 CA3505331 |
276 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA3505330 rs764228342 |
276 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA3505332 rs374254724 |
278 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3505333 rs114569184 |
279 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1429315522 CA361706401 |
280 | T>I | No |
ClinGen TOPMed |
|
|
CA129083824 rs984263969 |
281 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1186947774 CA361706412 |
282 | G>V | No |
ClinGen TOPMed |
|
|
CA361706413 rs1255823894 |
283 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 284 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781323596 CA3505336 |
284 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA3505337 rs140041300 |
285 | S>* | No |
ClinGen ESP ExAC gnomAD |
|
|
CA3505339 rs777347544 |
286 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA361706433 rs1435230462 |
286 | L>H | No |
ClinGen TOPMed gnomAD |
|
|
rs770596928 CA361706435 |
287 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs770596928 CA3505341 |
287 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA129083851 rs773941075 |
287 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505342 rs773941075 |
287 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770596928 CA361706434 |
287 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3505343 rs759942385 |
288 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361706445 rs1328378155 |
289 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1225377370 CA361706446 |
289 | T>N | No |
ClinGen gnomAD |
|
|
CA3505344 rs772394901 |
290 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs1329630708 CA361706463 |
291 | I>M | No |
ClinGen TOPMed |
|
|
CA361706467 rs761259326 |
292 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505347 rs761259326 |
292 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775926426 CA3505346 |
292 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs111931838 CA129083881 |
293 | V>I | No |
ClinGen Ensembl |
|
|
CA3505349 rs115111282 |
298 | H>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA129083889 rs1025069199 |
298 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs199635266 CA129083906 |
299 | K>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs765607562 CA361706523 |
301 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765607562 CA3505351 |
301 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361706528 rs754890390 |
301 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505352 rs750646790 |
301 | N>S | No |
ClinGen ExAC TOPMed |
|
|
rs1396120018 CA361706541 |
303 | C>* | No |
ClinGen Ensembl |
|
|
CA361706553 rs1245921907 |
305 | L>F | No |
ClinGen TOPMed |
|
|
rs1175447922 CA361706559 |
306 | I>F | No |
ClinGen gnomAD |
|
|
rs1187860041 CA361706561 |
306 | I>T | No |
ClinGen TOPMed |
|
|
rs1393134111 CA361706573 |
308 | S>N | No |
ClinGen gnomAD |
|
|
rs767409327 COSM1435113 RCV000756640 CA3505354 CA361706576 |
308 | S>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD ClinVar dbSNP |
|
rs1051469969 CA129083951 |
309 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA361706608 rs1205728641 |
313 | L>F | No |
ClinGen TOPMed |
|
|
rs777527899 CA3505357 |
314 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA3505358 rs550652441 |
315 | L>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3505359 rs569436962 |
315 | L>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 316 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1301908588 CA361706627 |
317 | P>L | No |
ClinGen gnomAD |
|
|
CA129083988 rs369899874 |
317 | P>T | No |
ClinGen ESP |
|
|
rs1343477650 CA361706633 |
318 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA3505360 rs536416205 |
319 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361706674 rs1240257956 |
324 | H>Y | No |
ClinGen gnomAD |
|
|
CA129083993 rs1053664339 |
327 | S>F | No |
ClinGen TOPMed |
|
|
CA3505361 rs373056487 |
328 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs773246028 COSM205962 CA3505364 |
332 | P>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs762028579 CA3505366 |
333 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361706946 rs765407252 |
335 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1245188795 CA361706948 |
335 | I>T | No |
ClinGen gnomAD |
|
|
CA3505367 RCV000733431 rs765407252 |
335 | I>V | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA3505369 rs773629114 |
337 | L>F | No |
ClinGen ExAC |
|
|
rs1388105489 CA361706962 |
337 | L>P | No |
ClinGen TOPMed |
|
|
CA3505372 rs766441629 |
339 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA3505370 rs763284551 |
339 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA3505371 rs766441629 |
339 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs763284551 CA361706971 |
339 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1561821834 CA361706977 |
340 | V>A | No |
ClinGen Ensembl |
|
|
rs753686519 CA3505375 |
341 | V>A | No |
ClinGen ExAC |
|
|
CA3505374 rs764138177 |
341 | V>L | No |
ClinGen ExAC |
|
|
rs778380835 CA3505377 |
342 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs1167797605 CA361706987 |
342 | A>V | No |
ClinGen TOPMed |
|
|
CA361706990 rs1445018499 |
343 | A>G | No |
ClinGen TOPMed |
|
|
CA129084067 rs775548374 |
343 | A>T | No |
ClinGen Ensembl |
|
|
rs1248592024 CA361706998 |
344 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA361707033 rs1561821894 |
350 | G>R | No |
ClinGen Ensembl |
|
|
CA361707043 rs1255503996 |
351 | K>R | No |
ClinGen TOPMed |
|
|
rs1392464335 CA361707056 |
353 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3505381 rs145359896 |
356 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs768874273 CA3505382 |
358 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA361707111 rs1335035062 |
361 | A>V | No |
ClinGen gnomAD |
|
|
CA361707119 rs1215069127 |
362 | G>V | No |
ClinGen gnomAD |
|
|
CA361707121 rs1488150426 |
363 | H>Y | No |
ClinGen gnomAD |
|
|
rs1360579129 CA361707133 |
364 | I>T | No |
ClinGen TOPMed |
|
|
rs1317835953 CA361707137 |
365 | P>S | No |
ClinGen TOPMed |
|
|
CA129084136 rs200609339 |
366 | T>P | No |
ClinGen gnomAD |
|
|
CA129084144 COSM247378 rs868052713 |
370 | P>S | prostate [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA361707169 rs868052713 |
370 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA361707178 rs1418899122 |
371 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs748656046 CA3505384 |
371 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs770371218 CA3505385 |
372 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505386 rs773426707 |
373 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA3505387 rs763082940 |
374 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771204785 CA3505388 |
376 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs774412132 CA3505389 |
378 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505391 rs763790308 |
379 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361707249 rs1355755955 |
382 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361707250 rs1234735248 |
383 | A>T | No |
ClinGen gnomAD |
|
|
CA3505392 rs376037126 |
384 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs386833493 CA3505393 |
386 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs921062664 CA129084189 |
386 | A>T | No |
ClinGen gnomAD |
|
|
CA3505394 rs147953424 |
387 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361707277 rs1479599084 |
387 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA361707273 rs147953424 |
387 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749958812 CA3505395 |
389 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3505397 rs759803722 |
391 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3505398 rs751170105 |
392 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs370650784 CA3505399 |
395 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361707327 rs1429224715 |
396 | I>V | No |
ClinGen gnomAD |
|
|
CA3505401 rs781427437 |
397 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs374310335 CA3505402 |
398 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374310335 CA361707339 |
398 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361707350 rs1313932178 |
400 | L>V | No |
ClinGen gnomAD |
|
|
CA3505403 rs770451200 |
403 | M>K | No |
ClinGen ExAC gnomAD |
|
|
CA3505404 rs760012686 CA361707383 |
404 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361707394 rs1561822203 |
406 | K>R | No |
ClinGen Ensembl |
|
|
CA3505406 rs770881500 |
408 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA361707423 rs1297067317 |
410 | Y>C | No |
ClinGen gnomAD |
|
|
rs1292388651 CA361707428 |
411 | T>A | No |
ClinGen TOPMed |
|
|
CA361707443 rs1486535887 |
413 | K>I | No |
ClinGen TOPMed gnomAD |
|
|
CA361707442 rs1486535887 |
413 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1208395813 CA361707463 |
416 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1208395813 CA361707464 |
416 | Q>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 417 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3505411 rs761548758 |
418 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361707479 rs1287351968 |
418 | M>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA3505412 rs765209461 |
421 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA361707505 rs1449461806 |
422 | G>D | No |
ClinGen gnomAD |
|
|
rs750331459 CA3505413 |
422 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA361707517 rs1378960678 |
424 | C>R | No |
ClinGen Ensembl |
|
|
rs1320586992 CA361707532 |
426 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA361707543 rs1561822324 |
427 | I>M | No |
ClinGen Ensembl |
|
| rs1174821568 | 427 | I>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3505414 rs762593639 |
427 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA361707555 rs1321268187 |
429 | S>F | No |
ClinGen TOPMed |
|
|
rs115250230 CA3505416 |
430 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs115250230 CA361707557 |
430 | F>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3505417 rs751027078 |
431 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3505418 rs116443969 |
432 | H>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3505419 rs367808573 |
434 | F>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1160194922 CA361707599 |
436 | T>A | No |
ClinGen TOPMed |
|
|
CA3505420 rs753130663 |
438 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1433631774 CA361707622 |
439 | A>V | No |
ClinGen gnomAD |
|
|
CA361707625 rs1349920176 |
440 | L>V | No |
ClinGen gnomAD |
|
|
CA361707640 rs1293896869 |
442 | K>N | No |
ClinGen gnomAD |
|
|
CA3505421 rs756522316 |
442 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA129084295 rs116478722 |
445 | V>I | No |
ClinGen 1000Genomes |
|
|
CA361707662 rs1326271684 |
446 | K>* | No |
ClinGen TOPMed gnomAD |
|
|
CA3505423 rs749806759 |
448 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1240507935 CA361707681 |
449 | T>A | No |
ClinGen gnomAD |
|
|
CA3505425 rs778871884 |
450 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA361707687 rs1464513147 |
450 | G>R | No |
ClinGen gnomAD |
|
|
rs1453093292 CA361707715 |
454 | Q>E | No |
ClinGen gnomAD |
|
|
rs575414030 CA3505426 |
457 | G>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs371729146 CA129084319 |
459 | V>A | No |
ClinGen ESP |
|
|
rs542443884 CA3505427 |
460 | T>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3505428 rs775667788 |
461 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1160857063 CA361707771 |
464 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1325960716 CA361707786 |
466 | L>W | No |
ClinGen gnomAD |
|
|
CA3505429 rs747980133 |
467 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361707812 rs1203147428 |
471 | I>L | No |
ClinGen gnomAD |
|
|
CA361707828 rs1268772271 |
473 | P>R | No |
ClinGen gnomAD |
|
|
rs766277298 CA3505434 |
474 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs762815055 CA3505433 |
474 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA3505436 rs145765282 |
476 | Y>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs767323360 CA3505437 |
477 | S>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 477 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361707861 rs1275107430 |
479 | Q>* | No |
ClinGen gnomAD |
|
|
rs756610256 CA3505440 |
480 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1233907029 CA361707903 |
485 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs764538490 CA3505441 |
486 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3505442 rs148181478 |
487 | T>I | No |
ClinGen ESP ExAC gnomAD |
|
|
rs757709677 CA243094 RCV000176983 |
488 | I>V | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs571125699 CA3505443 |
492 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1403035327 CA361707947 |
493 | G>E | No |
ClinGen gnomAD |
|
| TCGA novel | 493 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3505445 rs564881130 |
494 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs747221616 CA3505446 |
495 | L>F | No |
ClinGen ExAC TOPMed |
|
|
CA3505447 rs768811618 |
496 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs150314895 CA3505448 |
496 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3505449 rs749073619 |
500 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA3505450 rs770791618 |
501 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA361708009 rs1361552259 |
503 | K>T | No |
ClinGen Ensembl |
|
|
rs774319175 CA3505451 |
504 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA129084422 rs1044949778 |
505 | W>* | No |
ClinGen TOPMed |
|
|
rs57814887 CA3505453 |
506 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3505454 rs775340106 |
511 | D>E | No |
ClinGen ExAC |
|
| TCGA novel | 513 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs752005332 CA3505455 |
514 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505456 rs754184929 |
515 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA129084446 rs906468026 |
518 | T>I | No |
ClinGen TOPMed |
|
|
CA3505458 rs115232988 |
519 | M>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA129084455 rs939349976 |
519 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA361708136 rs1561822752 |
522 | S>P | No |
ClinGen Ensembl |
|
|
rs758533023 CA3505460 |
525 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1162088298 CA361708161 |
526 | S>N | No |
ClinGen gnomAD |
|
|
CA361708184 rs1218224037 |
529 | I>M | No |
ClinGen TOPMed |
|
|
rs780124320 CA3505461 |
530 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA3505462 rs747027428 |
531 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361708196 rs1369717320 |
532 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1225888084 CA361708198 |
532 | L>R | No |
ClinGen TOPMed |
|
|
CA361708195 rs1369717320 |
532 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
COSM4135451 CA3505463 rs755227925 |
534 | G>R | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA361708239 rs1448915287 COSM3409998 |
539 | I>V | Variant assessed as Somatic; impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs749081581 CA3505466 |
540 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA361708273 rs1332480557 |
544 | L>I | No |
ClinGen TOPMed |
|
|
rs745802790 CA361708282 |
545 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772074266 CA3505470 |
546 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs775143472 CA3505471 |
547 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA129084531 rs548496494 |
549 | P>L | No |
ClinGen 1000Genomes |
|
|
rs1561822940 CA361708311 |
550 | K>T | No |
ClinGen Ensembl |
|
|
CA361708324 rs1184727376 |
552 | S>T | No |
ClinGen TOPMed |
|
|
CA3505474 rs370057170 |
557 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs762152722 CA3505475 |
560 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA3505478 rs750697624 |
565 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750697624 CA3505477 |
565 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA129084580 rs979024066 |
567 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA361708544 rs1276329470 |
570 | K>E | No |
ClinGen TOPMed |
|
|
CA361708550 rs1328281729 |
570 | K>R | No |
ClinGen gnomAD |
|
|
rs30832 CA361708593 |
574 | I>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs30832 CA361708595 |
574 | I>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1561823072 CA361708611 |
575 | K>R | No |
ClinGen Ensembl |
|
|
rs1349185450 CA361708625 |
576 | P>R | No |
ClinGen gnomAD |
|
|
CA129084583 rs987116484 |
578 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA3505482 rs375785597 |
579 | K>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA129084587 rs934543109 |
580 | I>T | No |
ClinGen TOPMed |
|
|
rs368864462 CA129084606 |
582 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA361708699 rs1247388334 |
584 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA361708701 rs1247388334 |
584 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs916874362 CA129084609 |
585 | A>S | No |
ClinGen Ensembl |
|
|
CA129084613 rs1044122373 |
589 | Y>H | No |
ClinGen Ensembl |
|
|
rs905644652 CA129084634 |
593 | E>K | No |
ClinGen Ensembl |
|
|
CA361708779 rs1159380577 |
595 | F>S | No |
ClinGen gnomAD |
|
|
rs776206829 CA129084636 |
596 | K>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 596 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 596 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3505492 rs761543121 |
599 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA361708811 rs1319939149 |
599 | L>I | No |
ClinGen gnomAD |
|
|
CA361708836 rs1299733113 |
600 | Y>* | No |
ClinGen gnomAD |
|
|
rs773660491 CA3505493 |
600 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000054571 rs387907492 CA216022 |
600 | Y>H | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs763259050 CA3505494 |
601 | K>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 602 | Q>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3505496 rs752026412 |
604 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1412248637 CA361708885 |
604 | V>F | No |
ClinGen TOPMed |
|
|
rs1330735657 CA361708902 |
605 | N>S | No |
ClinGen gnomAD |
|
|
CA361708914 rs1468912886 |
606 | P>L | No |
ClinGen gnomAD |
|
|
CA3505499 rs767618201 |
606 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3505500 rs756361392 |
607 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1057518327 RCV000413986 |
611 | V>missing | No |
ClinVar dbSNP |
|
|
rs750264598 CA3505502 |
611 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA129084669 rs764181468 CA3505501 |
611 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1202533929 CA361709004 |
613 | W>S | No |
ClinGen TOPMed |
|
|
rs115620919 CA3505504 |
615 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361709041 rs1365809849 |
615 | K>T | No |
ClinGen gnomAD |
|
|
CA3505505 rs780207230 |
616 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA3505507 rs752286696 |
619 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA361709108 rs1223696506 |
620 | K>T | No |
ClinGen TOPMed |
|
|
rs747574186 CA3505509 |
621 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs183475628 CA3505508 |
621 | I>V | No |
ClinGen 1000Genomes ExAC |
|
|
rs1319911776 CA361709131 |
622 | K>* | No |
ClinGen TOPMed |
|
|
rs1488740412 CA361709135 |
622 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1224491689 CA361709208 |
627 | T>S | No |
ClinGen gnomAD |
|
|
rs769511611 CA3505511 |
628 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1352009645 CA361709216 |
628 | L>P | No |
ClinGen gnomAD |
|
|
rs769511611 CA3505510 |
628 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749689580 CA3505512 |
630 | G>* | No |
ClinGen ExAC gnomAD |
|
|
rs373634748 CA361709273 |
633 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373634748 CA3505513 |
633 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1334933270 CA361709278 |
633 | D>V | No |
ClinGen gnomAD |
|
|
CA361709286 rs1581232513 |
634 | E>K | No |
ClinGen Ensembl |
|
|
rs757934013 CA129084710 |
635 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA129084715 rs981049286 |
636 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
rs760046756 CA3505515 |
637 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA361709339 rs1350258808 |
638 | Q>* | No |
ClinGen TOPMed |
|
|
CA129084726 rs1028391572 |
643 | P>S | No |
ClinGen TOPMed |
|
|
CA361709478 rs1418781486 |
648 | T>I | No |
ClinGen gnomAD |
|
|
CA361709477 rs1348690499 |
648 | T>S | No |
ClinGen TOPMed |
|
|
rs764424605 CA3505519 |
649 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs146042098 CA3505518 |
649 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs754107971 CA3505521 |
651 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA361709508 rs1179580843 |
653 | C>Y | Achondrogenesis, type ib (acg1b) [Ensembl] | No |
ClinGen TOPMed |
|
rs751334225 CA3505523 |
656 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs754976159 CA3505524 |
660 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs887084389 CA129084776 |
662 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA361709573 rs887084389 |
662 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs780945972 CA3505526 |
664 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1276614158 CA361709584 |
664 | I>T | No |
ClinGen gnomAD |
|
|
RCV000054572 rs387907490 CA216025 |
666 | T>A | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA361709594 rs387907490 |
666 | T>P | No |
ClinGen gnomAD |
|
|
CA3505530 rs574817339 |
669 | E>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3505531 rs376837549 COSM1064230 |
671 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA129084797 rs1038419867 |
671 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA3505534 rs774700553 |
673 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000454781 CA16609725 rs774700553 |
673 | D>G | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1226810242 CA361709635 |
673 | D>N | No |
ClinGen TOPMed |
|
|
CA3505533 rs774700553 |
673 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505536 rs775838389 |
676 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA3505537 rs760849293 |
677 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3505538 rs764256352 |
678 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505540 rs765518011 |
680 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA3505541 rs751425859 |
682 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA3505543 rs767534399 |
684 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs752568963 CA3505544 |
684 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1561823766 CA361709707 |
685 | Q>L | No |
ClinGen Ensembl |
|
| TCGA novel | 686 | C>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1375777199 CA361709719 |
687 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
CA361709723 rs1194723014 |
687 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3505546 rs777274719 |
688 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777274719 CA3505547 |
688 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505549 rs3776070 |
689 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs746291695 CA3505550 |
690 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505553 rs780668685 |
696 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3505554 rs114665866 |
697 | G>R | Variant assessed as Somatic; 4.657e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA129084880 rs371461728 |
698 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1363014467 CA361709783 |
698 | E>K | No |
ClinGen gnomAD |
|
|
CA361709790 rs1303977104 |
699 | Y>N | No |
ClinGen gnomAD |
|
|
CA361709808 rs1561823931 |
701 | K>* | No |
ClinGen Ensembl |
|
|
rs1300885987 CA361709810 |
701 | K>R | No |
ClinGen gnomAD |
|
|
CA361709842 rs1205574599 |
705 | E>V | No |
ClinGen gnomAD |
|
|
rs1317713075 CA361709855 |
707 | L>F | No |
ClinGen gnomAD |
|
|
CA361709863 rs1266306258 |
708 | L>H | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 708 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1266306258 CA361709864 |
708 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA361709866 rs1300954171 |
709 | F>I | No |
ClinGen TOPMed |
|
|
CA129084901 rs980557345 |
711 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs56803131 CA129084905 |
713 | Y>* | No |
ClinGen Ensembl |
|
|
rs1190941806 CA361709903 |
714 | E>K | No |
ClinGen gnomAD |
|
|
CA3505559 rs759438521 |
715 | A>P | Achondrogenesis, type ib (acg1b) [Ensembl] | No |
ClinGen ExAC gnomAD |
|
rs759438521 CA361709909 |
715 | A>T | Achondrogenesis, type ib (acg1b) Variant assessed as Somatic; impact. [Ensembl, NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3505561 rs760613033 |
716 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752482028 CA3505560 |
716 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361709942 rs1304258521 |
720 | E>A | No |
ClinGen TOPMed |
|
|
CA3505562 rs763981421 |
720 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs750039313 CA3505566 |
728 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs778577122 CA3505565 |
728 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1037285979 CA129084925 |
730 | V>I | No |
ClinGen gnomAD |
|
|
CA3505568 rs780285712 |
732 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1233927699 CA361710029 |
733 | G>D | No |
ClinGen gnomAD |
|
| TCGA novel | 735 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs982623180 CA129084928 |
735 | S>R | No |
ClinGen TOPMed |
|
|
CA361710059 rs1388300927 |
738 | S>G | No |
ClinGen TOPMed |
|
|
rs1554095446 CA3505569 |
738 | S>N | No |
ClinGen Ensembl |
4 associated diseases with P50443
[MIM: 222600]: Diastrophic dysplasia (DTD)
An autosomal recessive disease characterized by osteochondrodysplasia with clinical features including dwarfism, spinal deformation, and specific joint abnormalities. {ECO:0000269|PubMed:10466420}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 600972]: Achondrogenesis 1B (ACG1B)
A form of achondrogenesis type 1, a lethal form of chondrodysplasia characterized by deficient ossification in the lumbar vertebrae and absent ossification in the sacral, pubic and ischial bones and clinically by stillbirth or early death. In addition to severe micromelia, there is a disproportionately large cranium due to marked edema of soft tissues. ACG1B is an autosomal recessive disease. {ECO:0000269|PubMed:8528239}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 256050]: Atelosteogenesis 2 (AO2)
A perinatal dysplasia characterized by shortening of the limbs, a dysmorphic syndrome and radiographic skeletal features. Patients are stillborn or die soon after birth. {ECO:0000269|PubMed:8571951}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 226900]: Multiple epiphyseal dysplasia 4 (EDM4)
A generalized skeletal dysplasia associated with significant morbidity. Joint pain, joint deformity, waddling gait, and short stature are the main clinical signs and symptoms. Radiological examination of the skeleton shows delayed, irregular mineralization of the epiphyseal ossification centers and of the centers of the carpal and tarsal bones. Multiple epiphyseal dysplasia is broadly categorized into the more severe Fairbank and the milder Ribbing types. The Fairbank type is characterized by shortness of stature, short and stubby fingers, small epiphyses in several joints, including the knee, ankle, hand, and hip. The Ribbing type is confined predominantly to the hip joints and is characterized by hands that are normal and stature that is normal or near-normal. Multiple epiphyseal dysplasia type 4 is a recessively inherited form, characterized by early childhood-onset hip dysplasia and recurrent patella dislocation. Short stature is not frequent. {ECO:0000269|PubMed:12966518, ECO:0000269|PubMed:21922596}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- An autosomal recessive disease characterized by osteochondrodysplasia with clinical features including dwarfism, spinal deformation, and specific joint abnormalities. {ECO:0000269|PubMed:10466420}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A form of achondrogenesis type 1, a lethal form of chondrodysplasia characterized by deficient ossification in the lumbar vertebrae and absent ossification in the sacral, pubic and ischial bones and clinically by stillbirth or early death. In addition to severe micromelia, there is a disproportionately large cranium due to marked edema of soft tissues. ACG1B is an autosomal recessive disease. {ECO:0000269|PubMed:8528239}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A perinatal dysplasia characterized by shortening of the limbs, a dysmorphic syndrome and radiographic skeletal features. Patients are stillborn or die soon after birth. {ECO:0000269|PubMed:8571951}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A generalized skeletal dysplasia associated with significant morbidity. Joint pain, joint deformity, waddling gait, and short stature are the main clinical signs and symptoms. Radiological examination of the skeleton shows delayed, irregular mineralization of the epiphyseal ossification centers and of the centers of the carpal and tarsal bones. Multiple epiphyseal dysplasia is broadly categorized into the more severe Fairbank and the milder Ribbing types. The Fairbank type is characterized by shortness of stature, short and stubby fingers, small epiphyses in several joints, including the knee, ankle, hand, and hip. The Ribbing type is confined predominantly to the hip joints and is characterized by hands that are normal and stature that is normal or near-normal. Multiple epiphyseal dysplasia type 4 is a recessively inherited form, characterized by early childhood-onset hip dysplasia and recurrent patella dislocation. Short stature is not frequent. {ECO:0000269|PubMed:12966518, ECO:0000269|PubMed:21922596}. Note=The disease is caused by variants affecting the gene represented in this entry.
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| apical plasma membrane | The region of the plasma membrane located at the apical end of the cell. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| microvillus membrane | The portion of the plasma membrane surrounding a microvillus. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| bicarbonate transmembrane transporter activity | Enables the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3-. |
| chloride transmembrane transporter activity | Enables the transfer of chloride ions from one side of a membrane to the other. |
| oxalate transmembrane transporter activity | Enables the transfer of oxalate from one side of a membrane to the other. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals. |
| secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. |
| sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process | The chemical reactions and pathways resulting in the formation of 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems. |
| ion transport | The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| ossification | The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance. |
| sulfate transmembrane transport | The directed movement of sulfate across a membrane. |
15 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| A6QNW6 | SLC26A8 | Testis anion transporter 1 | Bos taurus (Bovine) | PR |
| Q86WA9 | SLC26A11 | Sodium-independent sulfate anion transporter | Homo sapiens (Human) | PR |
| Q96RN1 | SLC26A8 | Testis anion transporter 1 | Homo sapiens (Human) | PR |
| P58743 | SLC26A5 | Prestin | Homo sapiens (Human) | PR |
| Q8TE54 | SLC26A7 | Anion exchange transporter | Homo sapiens (Human) | PR |
| Q9R155 | Slc26a4 | Pendrin | Mus musculus (Mouse) | PR |
| Q9WVC8 | Slc26a3 | Chloride anion exchanger | Mus musculus (Mouse) | PR |
| Q99NH7 | Slc26a5 | Prestin | Mus musculus (Mouse) | PR |
| Q8R0C3 | Slc26a8 | Testis anion transporter 1 | Mus musculus (Mouse) | PR |
| Q924C9 | Slc26a3 | Chloride anion exchanger | Rattus norvegicus (Rat) | PR |
| Q9EPH0 | Slc26a5 | Prestin | Rattus norvegicus (Rat) | PR |
| Q02920 | Early nodulin-70 | Glycine max (Soybean) (Glycine hispida) | PR | |
| Q9FY46 | SULTR4;1 | Sulfate transporter 4.1, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SV13 | SULTR3;1 | Sulfate transporter 3.1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GYH8 | SULTR4;2 | Probable sulfate transporter 4.2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSSESKEQHN | VSPRDSAEGN | DSYPSGIHLE | LQRESSTDFK | QFETNDQCRP | YHRILIERQE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KSDTNFKEFV | IKKLQKNCQC | SPAKAKNMIL | GFLPVLQWLP | KYDLKKNILG | DVMSGLIVGI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LLVPQSIAYS | LLAGQEPVYG | LYTSFFASII | YFLLGTSRHI | SVGIFGVLCL | MIGETVDREL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QKAGYDNAHS | APSLGMVSNG | STLLNHTSDR | ICDKSCYAIM | VGSTVTFIAG | VYQVAMGFFQ |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VGFVSVYLSD | ALLSGFVTGA | SFTILTSQAK | YLLGLNLPRT | NGVGSLITTW | IHVFRNIHKT |
| 310 | 320 | 330 | 340 | 350 | 360 |
| NLCDLITSLL | CLLVLLPTKE | LNEHFKSKLK | APIPIELVVV | VAATLASHFG | KLHENYNSSI |
| 370 | 380 | 390 | 400 | 410 | 420 |
| AGHIPTGFMP | PKVPEWNLIP | SVAVDAIAIS | IIGFAITVSL | SEMFAKKHGY | TVKANQEMYA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| IGFCNIIPSF | FHCFTTSAAL | AKTLVKESTG | CHTQLSGVVT | ALVLLLVLLV | IAPLFYSLQK |
| 490 | 500 | 510 | 520 | 530 | 540 |
| SVLGVITIVN | LRGALRKFRD | LPKMWSISRM | DTVIWFVTML | SSALLSTEIG | LLVGVCFSIF |
| 550 | 560 | 570 | 580 | 590 | 600 |
| CVILRTQKPK | SSLLGLVEES | EVFESVSAYK | NLQIKPGIKI | FRFVAPLYYI | NKECFKSALY |
| 610 | 620 | 630 | 640 | 650 | 660 |
| KQTVNPILIK | VAWKKAAKRK | IKEKVVTLGG | IQDEMSVQLS | HDPLELHTIV | IDCSAIQFLD |
| 670 | 680 | 690 | 700 | 710 | 720 |
| TAGIHTLKEV | RRDYEAIGIQ | VLLAQCNPTV | RDSLTNGEYC | KKEEENLLFY | SVYEAMAFAE |
| 730 | |||||
| VSKNQKGVCV | PNGLSLSSD |