P27797
Gene name |
CALR |
Protein name |
Calreticulin |
Names |
CRP55, Calregulin, Endoplasmic reticulum resident protein 60, ERp60, HACBP, grp60 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:811 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
11 structures for P27797
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2CLR | X-ray | 200 A | C/F | 1-10 | PDB |
| 3DOW | X-ray | 230 A | B | 195-205 | PDB |
| 3POS | X-ray | 165 A | PDB | ||
| 3POW | X-ray | 155 A | PDB | ||
| 5LK5 | X-ray | 230 A | PDB | ||
| 5V90 | X-ray | 325 A | B/D | 238-273 | PDB |
| 6ENY | EM | 580 A | G | 18-417 | PDB |
| 7QPD | EM | 373 A | C | 18-417 | PDB |
| 8TZO | EM | 310 A | C | 1-417 | PDB |
| 8TZR | EM | 350 A | C | 1-417 | PDB |
| AF-P27797-F1 | Predicted | AlphaFoldDB |
328 variants for P27797
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000083257 rs1555760738 RCV002498437 RCV000083256 |
367 | L>missing | Primary myelofibrosis Thrombocythemia 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs765476509 RCV001329863 |
385 | K>missing | Thrombocythemia 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs777358098 CA9235597 |
3 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs1397929746 CA404300543 |
4 | S>P | No |
ClinGen gnomAD |
|
| TCGA novel | 5 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 5 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs756694331 CA9235599 |
6 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA9235600 rs780662640 |
6 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs941288230 CA305513269 |
8 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs770160684 CA9235605 |
11 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs763131258 CA9235607 |
12 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 12 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA305513317 rs929780860 |
13 | G>C | No |
ClinGen Ensembl |
|
|
rs1378379005 CA404300933 |
15 | A>G | No |
ClinGen gnomAD |
|
|
rs1378379005 CA404300941 |
15 | A>V | No |
ClinGen gnomAD |
|
|
rs1176515855 CA404300965 |
16 | V>I | No |
ClinGen gnomAD |
|
|
CA9235613 rs147368353 |
17 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9235612 rs752512916 |
17 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA9235614 rs147368353 |
17 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs775581620 CA305513366 |
18 | E>Q | No |
ClinGen TOPMed |
|
|
rs1405396151 CA404301065 |
19 | P>L | No |
ClinGen gnomAD |
|
|
CA404301222 rs1371775156 |
23 | F>L | No |
ClinGen gnomAD |
|
|
rs541091872 CA9235615 |
24 | K>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA404301269 rs1223633950 |
24 | K>R | No |
ClinGen gnomAD |
|
|
CA404301331 rs1207532147 |
26 | Q>K | No |
ClinGen gnomAD |
|
|
rs1236351578 CA404301472 |
30 | G>A | No |
ClinGen gnomAD |
|
|
rs1199946705 CA404301466 CA404301457 |
30 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs146793150 CA9235648 |
31 | D>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9235649 rs146793150 |
31 | D>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9235652 rs140472880 |
32 | G>A | No |
ClinGen ESP ExAC TOPMed |
|
|
CA305513871 CA9235651 rs377744854 |
32 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764831280 CA404301869 |
34 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs764831280 CA9235653 |
34 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA404302191 rs1448209762 |
41 | K>N | No |
ClinGen gnomAD |
|
|
rs1285438952 CA404302217 |
42 | H>L | No |
ClinGen gnomAD |
|
| TCGA novel | 42 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9235657 rs753324324 |
45 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753324324 CA9235658 |
45 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404302515 rs764612484 |
50 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA9235659 rs764612484 |
50 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA404302552 rs1315949624 |
51 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA404302601 rs1282502862 |
52 | S>N | No |
ClinGen gnomAD |
|
|
CA404302602 rs1282502862 |
52 | S>T | No |
ClinGen gnomAD |
|
|
COSM1711886 rs757608389 CA9235661 |
56 | F>L | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs200631709 CA404302726 |
57 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9235662 rs138503495 RCV000943310 |
57 | Y>C | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA9235664 rs758537042 |
58 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs780108025 CA9235665 |
59 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs550300014 CA9235667 |
60 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1383867644 CA404302896 |
62 | K>E | No |
ClinGen gnomAD |
|
|
rs1335654763 CA404302947 |
63 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 65 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765669613 CA305514147 |
67 | Q>* | No |
ClinGen Ensembl |
|
|
CA404303351 rs1274707844 |
67 | Q>R | No |
ClinGen TOPMed |
|
|
rs1404498335 CA404303463 |
71 | D>G | No |
ClinGen gnomAD |
|
|
rs1228790764 CA404303481 |
72 | A>T | No |
ClinGen TOPMed |
|
|
CA404303490 rs1278938364 |
72 | A>V | No |
ClinGen gnomAD |
|
|
CA305514151 rs370585408 |
73 | R>C | No |
ClinGen ESP |
|
|
rs1309384945 CA404303532 |
74 | F>L | No |
ClinGen gnomAD |
|
|
CA305514171 rs528652331 |
76 | A>G | No |
ClinGen 1000Genomes |
|
|
CA404303631 rs1328767759 |
77 | L>V | No |
ClinGen TOPMed |
|
|
CA404303672 rs1216454628 |
79 | A>V | No |
ClinGen gnomAD |
|
|
CA404303691 rs777068782 |
80 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1599659411 CA404303699 |
80 | S>R | No |
ClinGen Ensembl |
|
|
CA9235697 rs777068782 |
80 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA305514197 rs11547568 |
81 | F>L | No |
ClinGen Ensembl |
|
|
rs762383116 CA9235698 |
83 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA9235699 rs765669905 |
83 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1490093056 CA404303939 |
89 | Q>* | No |
ClinGen gnomAD |
|
|
CA9235701 rs763267459 |
89 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs1193873308 CA404303952 |
89 | Q>R | No |
ClinGen gnomAD |
|
|
CA9235702 rs766631731 |
90 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs373993748 CA9235703 |
90 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9235706 rs752653131 |
92 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs370869315 CA9235708 |
93 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9235709 rs370869315 |
93 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770825346 CA9235710 |
96 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs1380658532 CA404304150 |
97 | V>M | No |
ClinGen gnomAD |
|
|
CA9235713 rs771554069 |
103 | I>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 103 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9235714 rs775075277 |
105 | C>Y | No |
ClinGen ExAC |
|
|
CA9235717 rs773681781 |
110 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs763359131 CA9235718 |
112 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1440405540 CA404305286 |
113 | F>L | No |
ClinGen TOPMed |
|
|
rs550682309 CA9235721 |
114 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs550682309 CA9235720 |
114 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1599659517 CA404305337 |
115 | N>S | No |
ClinGen Ensembl |
|
|
rs1599659521 CA404305350 |
116 | S>G | No |
ClinGen Ensembl |
|
|
CA404305410 rs1181727268 |
118 | D>E | No |
ClinGen gnomAD |
|
|
rs201017921 CA9235723 |
118 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1599659539 CA404305459 |
120 | T>K | No |
ClinGen Ensembl |
|
|
CA404305506 rs1440152184 |
122 | M>K | No |
ClinGen gnomAD |
|
|
CA9235724 rs756230073 |
122 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9235725 rs764176324 |
124 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9235726 rs753812197 |
125 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs536586990 CA305514371 |
126 | S>L | No |
ClinGen Ensembl |
|
|
CA9235728 rs375318260 |
127 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM991544 CA305514389 rs200421584 |
128 | Y>C | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes NCI-TCGA |
|
rs778770240 CA9235729 |
129 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA9235730 rs200105930 |
129 | N>I | No |
ClinGen ExAC gnomAD |
|
|
rs1174378826 CA404306017 |
134 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 134 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9235759 rs775846295 |
136 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA404306091 rs1425763533 |
138 | G>R | No |
ClinGen TOPMed |
|
|
rs1482810500 CA404306110 |
139 | P>L | No |
ClinGen TOPMed |
|
|
rs1353262366 CA404306106 |
139 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs761940782 CA9235763 |
141 | T>S | No |
ClinGen ExAC |
|
|
CA9235764 rs765257046 |
143 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA305514903 rs149216548 |
144 | V>I | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA9235765 rs750310401 |
147 | I>V | No |
ClinGen ExAC |
|
|
rs1316053037 CA404306303 |
149 | N>K | No |
ClinGen TOPMed |
|
|
rs762866016 CA9235766 |
149 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA305514908 rs192388573 |
151 | K>Q | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA404306343 rs1270879893 |
151 | K>R | No |
ClinGen gnomAD |
|
|
CA404306358 rs1244932238 |
152 | G>S | No |
ClinGen TOPMed |
|
|
CA9235769 rs754640343 |
153 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA9235771 rs752236819 |
154 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs143361476 CA9235772 |
154 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA305514951 rs898685637 |
155 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA9235775 rs772561689 |
158 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404306515 rs772561689 |
158 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780575677 CA9235776 |
160 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769026163 CA9235778 |
161 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776958612 CA9235779 |
162 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9235780 rs532726457 |
162 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9235805 rs148345745 |
165 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA404306873 rs775197304 |
167 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA9235807 rs760256751 |
168 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA9235808 rs763749997 |
169 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs11547569 CA9235814 |
176 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1031122373 CA305515275 |
177 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA404307070 rs1451773406 |
177 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA404307090 rs1353439888 |
178 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA305515281 rs956997728 |
179 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA404307135 rs1486461030 |
180 | N>T | No |
ClinGen Ensembl |
|
|
rs1439711150 CA404307162 |
181 | T>I | No |
ClinGen gnomAD |
|
|
rs756312947 CA9235816 |
186 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1224218038 CA404307286 |
188 | N>S | No |
ClinGen gnomAD |
|
|
CA9235818 rs147369833 |
189 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs147369833 CA9235817 |
189 | S>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 190 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404307351 rs1599660037 |
191 | V>M | No |
ClinGen Ensembl |
|
|
CA9235820 rs774337397 |
192 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404307422 rs1236632838 |
193 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs771939411 CA9235822 |
194 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs775169572 CA9235823 |
196 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs199565419 CA404307560 |
199 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9235825 rs199565419 |
199 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA404307546 rs199565419 |
199 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1012156672 CA305515368 |
201 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1371727784 CA404307654 |
202 | F>L | No |
ClinGen Ensembl |
|
|
CA9235828 rs79497711 |
202 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs749888508 CA9235829 |
205 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 206 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9235831 rs534189742 |
208 | I>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9235830 rs755559115 |
208 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs753035212 CA9235832 |
209 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA9235833 rs756471809 |
210 | D>H | No |
ClinGen ExAC |
|
|
CA404307919 rs1285301824 |
211 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs970377727 CA305515386 |
212 | D>V | No |
ClinGen TOPMed |
|
|
rs369547041 CA9235834 |
213 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA404307972 rs1232585250 |
213 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA404307987 rs1599660098 |
214 | S>A | No |
ClinGen Ensembl |
|
|
rs200173883 CA9235835 |
216 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1194438507 CA404308098 |
217 | E>K | No |
ClinGen gnomAD |
|
|
rs745898206 CA9235838 |
218 | D>N | No |
ClinGen ExAC |
|
|
rs1490417226 CA404308232 |
221 | E>K | No |
ClinGen gnomAD |
|
|
CA404308277 rs371806484 |
222 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9235840 rs371806484 |
222 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9235839 rs764695158 |
222 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs139658454 CA404308364 |
225 | I>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs746826200 CA9235841 |
225 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404308388 rs938433963 |
226 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs938433963 CA305515470 |
226 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs938433963 CA404308392 |
226 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA404308422 rs1599660153 |
227 | D>H | No |
ClinGen Ensembl |
|
|
rs1056862836 CA305515474 |
227 | D>V | No |
ClinGen Ensembl |
|
|
CA9235843 rs149740908 |
228 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA305515475 rs1012573592 |
233 | P>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 234 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404308752 rs1599660258 |
235 | D>N | No |
ClinGen Ensembl |
|
|
CA9235872 rs762130142 |
235 | D>V | No |
ClinGen ExAC TOPMed |
|
|
CA305515731 rs1019627616 |
240 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA404308943 rs1239263833 |
243 | P>A | No |
ClinGen gnomAD |
|
|
rs559703788 CA9235874 |
243 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA404309015 rs1328636364 |
245 | P>L | No |
ClinGen TOPMed |
|
|
rs1268034614 CA404309006 |
245 | P>S | No |
ClinGen gnomAD |
|
|
CA9235877 rs751538049 |
247 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs754969766 CA9235878 |
250 | P>T | No |
ClinGen ExAC |
|
|
rs755951120 CA9235881 |
251 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9235882 rs777628969 |
255 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA404310419 rs1160175170 |
255 | E>G | No |
ClinGen gnomAD |
|
|
rs748946100 CA9235883 |
256 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA9235884 rs371463754 |
257 | M>I | No |
ClinGen ESP ExAC gnomAD |
|
|
CA404310475 rs1158435388 |
257 | M>L | No |
ClinGen gnomAD |
|
| TCGA novel | 258 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 260 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1378951956 CA404310588 |
260 | E>G | No |
ClinGen gnomAD |
|
|
rs148447453 CA9235886 |
263 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA404310678 rs769245573 |
263 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9235887 rs769245573 |
263 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148447453 CA404310670 |
263 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1227247334 CA404310712 |
264 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA305516892 rs372688428 |
266 | I>M | No |
ClinGen Ensembl |
|
|
CA9235889 rs777096782 |
270 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1226804338 CA404310823 |
271 | Y>C | No |
ClinGen TOPMed |
|
|
rs1325628287 CA404310836 |
272 | K>E | No |
ClinGen gnomAD |
|
|
CA305517120 rs367922867 |
273 | G>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs367922867 CA404310979 |
273 | G>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA9235911 rs766667846 |
273 | G>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 274 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774414495 CA9235912 |
274 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767701623 CA404311128 |
278 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9235914 rs767701623 |
278 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759720623 CA9235913 |
278 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404311163 rs1433719863 |
279 | Q>H | No |
ClinGen TOPMed |
|
|
CA305517174 rs907856910 |
279 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA404311192 rs1273674394 |
280 | I>T | No |
ClinGen gnomAD |
|
|
rs752760579 CA9235915 |
280 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA9235918 rs753706198 |
281 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404311339 rs1298450974 |
284 | D>A | No |
ClinGen TOPMed |
|
|
CA9235919 rs756980463 |
285 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA9235920 rs778680432 |
287 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA9235921 rs778680432 |
287 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs940720149 CA305517266 |
288 | T>S | No |
ClinGen TOPMed |
|
|
CA404311590 rs1568448756 |
292 | P>L | No |
ClinGen Ensembl |
|
|
CA404311634 rs1359004353 |
294 | I>M | No |
ClinGen TOPMed |
|
|
CA9235922 rs757976423 |
294 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA9235924 rs746475957 |
295 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA9235923 rs779550076 |
295 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA9235925 rs770320546 |
297 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1158895651 CA404311693 |
297 | P>T | No |
ClinGen TOPMed |
|
|
COSM709890 rs1486495406 CA404311728 |
298 | E>* | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1486495406 CA404311722 |
298 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs749715575 CA9235927 |
301 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9235930 rs759684254 |
302 | D>G | No |
ClinGen ExAC |
|
|
CA9235929 rs375135016 |
302 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs772370252 CA9235931 |
303 | P>R | No |
ClinGen ExAC TOPMed |
|
|
rs775741226 CA9235932 |
304 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA9235934 rs764176358 |
306 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs1345312350 CA404311954 |
307 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA305517330 rs964090332 |
307 | A>S | No |
ClinGen Ensembl |
|
|
rs1345312350 CA404311951 |
307 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1364364542 CA404312019 |
309 | D>G | No |
ClinGen gnomAD |
|
|
rs1318523776 CA404312001 |
309 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1026947469 CA305517340 |
313 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs372777769 CA305517346 |
318 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9235943 rs372777769 |
318 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA404314295 rs1336604811 |
322 | K>E | No |
ClinGen gnomAD |
|
|
rs748221094 CA9235972 |
326 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1156624733 CA404314557 |
330 | F>C | No |
ClinGen TOPMed |
|
|
CA404314564 rs769661818 CA9235973 |
330 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404314569 rs1200997295 |
331 | L>F | No |
ClinGen TOPMed |
|
|
CA404314574 rs1466726242 |
331 | L>H | No |
ClinGen TOPMed |
|
|
rs368136620 CA9235975 |
332 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1282517726 CA404314637 |
335 | D>E | No |
ClinGen TOPMed |
|
|
rs530463916 CA9235978 |
335 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs530463916 CA9235977 |
335 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 336 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA305519978 rs889138519 |
337 | A>V | No |
ClinGen gnomAD |
|
|
CA404314670 rs1346217838 |
338 | Y>C | No |
ClinGen TOPMed |
|
| TCGA novel | 338 | Y>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1200295838 CA404314680 |
339 | A>T | No |
ClinGen gnomAD |
|
|
CA305519999 rs570289702 |
340 | E>D | No |
ClinGen 1000Genomes |
|
|
rs1477630481 CA404314831 |
344 | N>D | No |
ClinGen gnomAD |
|
|
rs755626585 CA9235981 |
344 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750961102 CA9235983 |
345 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA9235985 rs758904907 |
346 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 347 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1405633070 CA404314968 |
348 | G>D | No |
ClinGen gnomAD |
|
|
CA9235986 rs780575601 |
348 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA9235988 rs144233437 |
349 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs144233437 CA404314988 |
349 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1174226840 CA404315081 |
351 | K>N | No |
ClinGen TOPMed |
|
|
rs1359478180 CA404315220 |
353 | A>T | No |
ClinGen TOPMed |
|
|
rs781327462 CA9236008 |
356 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1161377561 CA404315464 |
361 | Q>L | No |
ClinGen gnomAD |
|
|
CA305520280 rs151032910 |
362 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 362 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA404315514 rs1167230978 |
363 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA404315556 rs1457476768 |
364 | E>K | No |
ClinGen gnomAD |
|
|
rs749320321 CA9236013 |
365 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA9236014 rs770889031 |
367 | L>H | No |
ClinGen ExAC gnomAD |
|
|
CA9236016 rs778797734 |
368 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA305520337 rs901041813 |
370 | E>V | No |
ClinGen TOPMed |
|
|
CA305520374 rs554136219 |
371 | E>A | No |
ClinGen Ensembl |
|
|
CA404315760 rs1568449692 |
372 | E>K | No |
ClinGen Ensembl |
|
|
CA404315792 rs1339443654 |
373 | D>A | No |
ClinGen gnomAD |
|
|
CA9236019 rs771893435 |
373 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9236021 rs775075852 COSM3720638 |
374 | K>R | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA9236022 rs760388477 |
376 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1208070437 CA404315862 |
376 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA404315923 rs1305817662 |
378 | E>G | No |
ClinGen TOPMed |
|
|
rs201971744 CA9236025 |
380 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs143880510 CA9236026 RCV000950840 |
381 | E>A | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA9236028 rs370029737 |
384 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9236027 rs761374568 |
384 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA9236031 rs535789821 |
385 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1159150142 CA404316170 |
385 | K>N | No |
ClinGen gnomAD |
|
|
rs1024435400 CA305520473 |
385 | K>T | No |
ClinGen TOPMed |
|
|
CA404316172 rs1276401921 |
386 | E>K | No |
ClinGen gnomAD |
|
|
rs765059081 CA9236033 |
387 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA404316214 rs1360248191 |
387 | D>V | No |
ClinGen gnomAD |
|
|
CA305520503 rs971167629 |
388 | D>Y | No |
ClinGen TOPMed |
|
|
CA9236038 rs752951204 |
391 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA404316564 rs1283919745 |
396 | E>K | No |
ClinGen gnomAD |
|
|
CA404316574 rs1313827767 |
396 | E>V | No |
ClinGen gnomAD |
|
|
rs1037708390 CA404316611 |
397 | D>E | No |
ClinGen TOPMed |
|
|
CA9236044 rs777934720 |
397 | D>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1738023 CA404316632 rs1264674656 |
398 | E>D | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA9236047 rs150264068 |
398 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1222423364 CA404316664 |
400 | D>V | No |
ClinGen TOPMed |
|
| TCGA novel | 401 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1471691318 CA404316710 |
402 | E>Q | No |
ClinGen gnomAD |
|
|
CA404316771 rs1599662588 |
404 | D>N | No |
ClinGen Ensembl |
|
|
rs1426498732 CA404316795 |
405 | E>K | No |
ClinGen gnomAD |
|
|
CA404316819 rs1174438067 |
406 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA404316910 rs745819141 |
409 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9236052 rs745819141 |
409 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs866651711 CA305520645 |
410 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA404316917 rs1368310230 |
410 | P>S | No |
ClinGen gnomAD |
|
|
CA305520659 rs746740154 |
411 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746740154 CA9236055 |
411 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA404316988 rs1300480978 |
413 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1300480978 CA404316991 |
413 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA9236058 rs148604761 |
415 | D>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs769424711 CA9236059 |
416 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA404317051 rs1482164699 |
417 | L>P | No |
ClinGen gnomAD |
1 associated diseases with P27797
Without disease ID
3 regional properties for P27797
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | Calreticulin/calnexin, conserved site | 98 - 113 | IPR018124-1 |
| conserved_site | Calreticulin/calnexin, conserved site | 130 - 138 | IPR018124-2 |
| conserved_site | Calreticulin/calnexin, conserved site | 242 - 254 | IPR018124-3 |
Functions
29 GO annotations of cellular component
| Name | Definition |
|---|---|
| acrosomal vesicle | A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome. |
| cell surface | The external part of the cell wall and/or plasma membrane. |
| collagen-containing extracellular matrix | An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells. |
| cortical granule | A secretory vesicle that is stored under the cell membrane of an egg. These vesicles fuse with the egg plasma membrane as part of egg activation and are part of the block to polyspermy. |
| cytolytic granule | A specialized secretory lysosome that is present in cells with cytolytic capability such as cytotoxic T lymphocytes and natural killer cells. Cytolytic granules mediate the storage and regulated excretion of lytic molecules for killing of target cells. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| endocytic vesicle lumen | The volume enclosed by the membrane of an endocytic vesicle. |
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| endoplasmic reticulum lumen | The volume enclosed by the membranes of the endoplasmic reticulum. |
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| endoplasmic reticulum quality control compartment | A subcompartment of the endoplasmic reticulum in which proteins with improper or incorrect folding accumulate. Enzymes in this compartment direct proteins with major folding problems to translocation to the cytosol and degradation, and proteins with minor folding problems to the ER, to interact with chaperon proteins. |
| endoplasmic reticulum-Golgi intermediate compartment membrane | The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system. |
| external side of plasma membrane | The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| extracellular region | The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. |
| extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
| focal adhesion | A cell-substrate junction that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments. In insects focal adhesion has also been referred to as hemi-adherens junction (HAJ). |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| integral component of lumenal side of endoplasmic reticulum membrane | The component of the endoplasmic reticulum membrane consisting of the gene products that penetrate only the lumenal side of the membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| MHC class I peptide loading complex | A large, multisubunit complex which consists of the MHC class I-beta 2 microglobulin dimer, the transporter associated with antigen presentation (TAP), tapasin (an MHC-encoded membrane protein), the chaperone calreticulin and the thiol oxidoreductase ERp57. Functions in the assembly of peptides with newly synthesized MHC class I molecules. |
| nuclear envelope | The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space). |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| perinuclear region of cytoplasm | Cytoplasm situated near, or occurring around, the nucleus. |
| phagocytic vesicle membrane | The lipid bilayer surrounding a phagocytic vesicle. |
| polysome | A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro. |
| sarcoplasmic reticulum lumen | The volume enclosed by the membranes of the sarcoplasmic reticulum. |
| smooth endoplasmic reticulum | The smooth endoplasmic reticulum (smooth ER or SER) has no ribosomes attached to it. The smooth ER is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER. |
16 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium ion binding | Binding to a calcium ion (Ca2+). |
| carbohydrate binding | Binding to a carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
| chaperone binding | Binding to a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport. |
| complement component C1q complex binding | Binding to a C1q complex, a component of the classical complement cascade. |
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| hormone binding | Binding to an hormone, a naturally occurring substance secreted by specialized cells that affect the metabolism or behavior of cells possessing functional receptors for the hormone. Hormones may be produced by the same, or different, cell as express the receptor. |
| integrin binding | Binding to an integrin. |
| iron ion binding | Binding to an iron (Fe) ion. |
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| nuclear androgen receptor binding | Binding to a nuclear androgen receptor. |
| peptide binding | Binding to a peptide, an organic compound comprising two or more amino acids linked by peptide bonds. |
| protein folding chaperone | Binding to a protein or a protein-containing complex to assist the protein folding process. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| ubiquitin protein ligase binding | Binding to a ubiquitin protein ligase enzyme, any of the E3 proteins. |
| unfolded protein binding | Binding to an unfolded protein. |
| zinc ion binding | Binding to a zinc ion (Zn). |
40 GO annotations of biological process
| Name | Definition |
|---|---|
| cardiac muscle cell differentiation | The process in which a cardiac muscle precursor cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. |
| cellular calcium ion homeostasis | Any process involved in the maintenance of an internal steady state of calcium ions at the level of a cell. |
| cellular response to electrical stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus. |
| cellular response to lithium ion | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lithium (Li+) ion stimulus. |
| cellular response to virus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus. |
| cellular senescence | A cell aging process stimulated in response to cellular stress, whereby normal cells lose the ability to divide through irreversible cell cycle arrest. |
| cortical actin cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane. |
| glucocorticoid receptor signaling pathway | The series of molecular signals initiated by glucocorticoid binding to its receptor. |
| negative regulation of DNA-templated transcription | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
| negative regulation of intracellular steroid hormone receptor signaling pathway | Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of any intracellular steroid hormone receptor signaling pathway. |
| negative regulation of neuron differentiation | Any process that stops, prevents, or reduces the frequency, rate or extent of neuron differentiation. |
| negative regulation of retinoic acid receptor signaling pathway | Any process that stops, prevents, or reduces the frequency, rate or extent of retinoic acid receptor signaling pathway activity. |
| negative regulation of transcription by RNA polymerase II | Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II. |
| negative regulation of translation | Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. |
| negative regulation of trophoblast cell migration | Any process that stops, prevents or reduces the frequency, rate or extent of trophoblast cell migration. |
| peptide antigen assembly with MHC class I protein complex | The binding of a peptide to the antigen binding groove of an MHC class I protein complex. Class I here refers to classical class I molecules. |
| positive regulation of cell cycle | Any process that activates or increases the rate or extent of progression through the cell cycle. |
| positive regulation of cell population proliferation | Any process that activates or increases the rate or extent of cell proliferation. |
| positive regulation of dendritic cell chemotaxis | Any process that activates or increases the frequency, rate or extent of dendritic cell chemotaxis. |
| positive regulation of endothelial cell migration | Any process that increases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium. |
| positive regulation of gene expression | Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). |
| positive regulation of NIK/NF-kappaB signaling | Any process that activates or increases the frequency, rate or extent of NIK/NF-kappaB signaling. |
| positive regulation of phagocytosis | Any process that activates or increases the frequency, rate or extent of phagocytosis. |
| positive regulation of substrate adhesion-dependent cell spreading | Any process that activates or increases the frequency, rate or extent of substrate adhesion-dependent cell spreading. |
| protein export from nucleus | The directed movement of a protein from the nucleus into the cytoplasm. |
| protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. |
| protein folding in endoplasmic reticulum | A protein folding process that takes place in the endoplasmic reticulum (ER). Secreted, plasma membrane and organelle proteins are folded in the ER, assisted by chaperones and foldases (protein disulphide isomerases), and additional factors required for optimal folding (ATP, Ca2+ and an oxidizing environment to allow disulfide bond formation). |
| protein localization to nucleus | A process in which a protein transports or maintains the localization of another protein to the nucleus. |
| protein maturation by protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that results in the attainment of the full functional capacity of a protein. |
| protein stabilization | Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation. |
| regulation of apoptotic process | Any process that modulates the occurrence or rate of cell death by apoptotic process. |
| regulation of DNA-templated transcription | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
| regulation of meiotic nuclear division | Any process that modulates the frequency, rate or extent of meiotic nuclear division, the process in which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes. |
| response to estradiol | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen. |
| response to glycoside | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycoside stimulus. |
| response to testosterone | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus. |
| response to xenobiotic stimulus | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a xenobiotic, a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical. |
| sequestering of calcium ion | The process of binding or confining calcium ions such that they are separated from other components of a biological system. |
| spermatogenesis | The developmental process by which male germ line stem cells self renew or give rise to successive cell types resulting in the development of a spermatozoa. |
| ubiquitin-dependent ERAD pathway | The series of steps necessary to target endoplasmic reticulum (ER)-resident proteins for degradation by the cytoplasmic proteasome. Begins with recognition of the ER-resident protein, includes retrotranslocation (dislocation) of the protein from the ER to the cytosol, protein ubiquitination necessary for correct substrate transfer, transport of the protein to the proteasome, and ends with degradation of the protein by the cytoplasmic proteasome. |
16 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q2TBR8 | CALR3 | Calreticulin-3 | Bos taurus (Bovine) | PR |
| P52193 | CALR | Calreticulin | Bos taurus (Bovine) | PR |
| P29413 | Calr | Calreticulin | Drosophila melanogaster (Fruit fly) | PR |
| Q96L12 | CALR3 | Calreticulin-3 | Homo sapiens (Human) | PR |
| O14967 | CLGN | Calmegin | Homo sapiens (Human) | PR |
| P27824 | CANX | Calnexin | Homo sapiens (Human) | PR |
| P14211 | Calr | Calreticulin | Mus musculus (Mouse) | PR |
| Q9D9Q6 | Calr3 | Calreticulin-3 | Mus musculus (Mouse) | PR |
| P28491 | CALR | Calreticulin | Sus scrofa (Pig) | PR |
| P18418 | Calr | Calreticulin | Rattus norvegicus (Rat) | PR |
| Q9SLY8 | CRO1 | Calreticulin | Oryza sativa subsp japonica (Rice) | PR |
| P27798 | crt-1 | Calreticulin | Caenorhabditis elegans | PR |
| Q7Z1E6 | crt | Calreticulin | Bombyx mori (Silk moth) | PR |
| Q38858 | CRT2 | Calreticulin-2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O04151 | CRT1 | Calreticulin-1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O04153 | CRT3 | Calreticulin-3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MLLSVPLLLG | LLGLAVAEPA | VYFKEQFLDG | DGWTSRWIES | KHKSDFGKFV | LSSGKFYGDE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EKDKGLQTSQ | DARFYALSAS | FEPFSNKGQT | LVVQFTVKHE | QNIDCGGGYV | KLFPNSLDQT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DMHGDSEYNI | MFGPDICGPG | TKKVHVIFNY | KGKNVLINKD | IRCKDDEFTH | LYTLIVRPDN |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TYEVKIDNSQ | VESGSLEDDW | DFLPPKKIKD | PDASKPEDWD | ERAKIDDPTD | SKPEDWDKPE |
| 250 | 260 | 270 | 280 | 290 | 300 |
| HIPDPDAKKP | EDWDEEMDGE | WEPPVIQNPE | YKGEWKPRQI | DNPDYKGTWI | HPEIDNPEYS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| PDPSIYAYDN | FGVLGLDLWQ | VKSGTIFDNF | LITNDEAYAE | EFGNETWGVT | KAAEKQMKDK |
| 370 | 380 | 390 | 400 | 410 | |
| QDEEQRLKEE | EEDKKRKEEE | EAEDKEDDED | KDEDEEDEED | KEEDEEEDVP | GQAKDEL |