P23769
Gene name |
GATA2 |
Protein name |
Endothelial transcription factor GATA-2 |
Names |
GATA-binding protein 2 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:2624 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
3 structures for P23769
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 5O9B | NMR | - | A | 343-391 | PDB |
| 6ZFV | NMR | - | A | 291-334 | PDB |
| AF-P23769-F1 | Predicted | AlphaFoldDB |
586 variants for P23769
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA354409342 rs1220018679 RCV001036387 |
3 | V>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000803337 rs1576750043 CA354409327 |
4 | A>E | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs760132552 RCV000556049 CA354409314 |
6 | E>K | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000812513 rs1576750018 CA915941571 |
6 | E>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001060401 rs771557922 |
8 | P>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA2600123 rs771557922 RCV000531890 |
8 | P>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001294996 rs771557922 |
8 | P>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs367785289 RCV001764595 RCV001764594 RCV002255460 CA2600122 RCV001821590 RCV000551947 RCV001007609 |
10 | W>C | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome Hereditary cancer-predisposing syndrome Acute myeloid leukemia [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1576749993 RCV000813153 CA354409249 |
10 | W>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs2068711214 RCV001049039 |
13 | H>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000807890 rs749214277 CA2600119 |
14 | P>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001347791 rs2068710977 |
15 | A>D | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA2600115 RCV003153899 RCV001038330 rs781485787 |
16 | V>M | Deafness-lymphedema-leukemia syndrome Increased risk to develop myelodysplastic syndrome, acute myeloid leukemia, or chronic myelomonocytic leukemia [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs777965976 RCV000649499 CA2600112 |
17 | L>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA354409117 rs1303947441 RCV000697049 |
20 | Q>P | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000810657 CA354409096 rs1576749923 |
21 | H>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001050933 CA2600111 rs535362527 |
21 | H>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1172590651 RCV001326780 CA354409089 |
22 | P>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA354409081 rs1430054108 RCV001303784 |
22 | P>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA354409083 rs1430054108 RCV000548083 |
22 | P>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs1172590651 CA354409087 RCV001038352 |
22 | P>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1172590651 RCV002549630 RCV000984845 CA354409091 |
22 | P>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1559988114 RCV000706249 |
23 | D>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs760183425 RCV001231837 |
23 | D>Y | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2068710194 RCV001065596 |
24 | S>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354409031 rs1576749889 RCV000818581 |
26 | H>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA2600102 RCV001224015 rs762794939 |
34 | M>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1576749857 RCV001147498 |
34 | M>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354408889 rs1576749857 RCV000808230 |
34 | M>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001221270 CA354408860 rs1348109698 |
36 | P>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
CA2600100 rs143590990 RCV001146587 RCV000227295 RCV000504452 RCV001084371 RCV002257600 |
41 | P>A | Deafness-lymphedema-leukemia syndrome Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs143590990 RCV001052565 CA354408800 |
41 | P>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000233976 RCV001262682 RCV002256172 CA2600097 rs370750401 |
46 | D>N | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs2068708769 RCV001065532 |
47 | V>G | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000649491 rs1553771139 CA354408694 |
47 | V>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA10582135 rs878855170 RCV000230807 RCV001812654 |
48 | F>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001341349 rs878855170 CA354408673 |
48 | F>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1474218678 RCV001059515 |
49 | F>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000799547 rs1576749789 COSM239953 CA354408634 |
50 | N>S | Deafness-lymphedema-leukemia syndrome prostate [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
rs1576749771 CA354408557 RCV000813253 |
54 | S>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs2068708141 RCV001062656 |
57 | N>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2068708070 RCV001226807 |
58 | P>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001542132 rs146150325 RCV001311611 |
59 | Y>* | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001331504 RCV000525982 rs140047487 CA2600092 |
59 | Y>C | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs750003894 RCV001243944 |
60 | Y>C | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs375349195 RCV000234722 RCV000765713 RCV000984835 CA2600089 |
61 | A>V | Deafness-lymphedema-leukemia syndrome Acute myeloid leukemia [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
RCV001049661 CA2600087 rs751200779 |
62 | N>K | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1240150433 CA354408391 RCV001066938 |
63 | P>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001050258 rs1576749724 CA354408387 |
63 | P>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs370831063 RCV001068495 CA354408373 |
64 | A>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs2068707355 RCV001298571 |
66 | A>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001297429 rs2068707325 |
66 | A>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000805266 CA354408281 rs1457679310 |
69 | R>H | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001320763 rs2068706969 |
69 | R>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000555700 RCV003224333 rs570531959 CA2600083 |
70 | V>F | Deafness-lymphedema-leukemia syndrome Acute myeloid leukemia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1254938356 RCV001059063 |
72 | Y>* | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs776819522 RCV001352606 CA354408198 |
74 | P>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA354408178 rs1559987952 RCV000700771 |
75 | A>G | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1179893883 CA354408191 RCV001051087 |
75 | A>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs1559987952 RCV001061948 |
75 | A>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000796147 CA354408164 rs1576749657 |
76 | H>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000022570 rs1576749301 RCV001542135 |
78 | R>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1371798524 RCV001236790 |
80 | T>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1060500083 RCV000461461 CA16611184 |
81 | G>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000022566 rs869320735 RCV001542136 |
82 | G>missing | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1426636606 RCV001220210 CA354407872 |
83 | Q>P | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001223174 rs1426636606 |
83 | Q>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001241041 rs2068699579 |
86 | R>H | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354407621 rs1269493584 RCV000805812 |
93 | P>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs2068699101 RCV001241973 |
94 | G>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001338445 rs1411693599 |
99 | D>E | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1417506136 RCV001299880 CA354407508 CA354407506 |
100 | G>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen gnomAD ClinVar dbSNP |
|
RCV000466926 CA16611182 RCV000500768 rs1060500084 |
100 | G>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1553771053 RCV001345918 |
101 | G>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000649500 rs1553771053 CA354407475 |
101 | G>D | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs2068698528 RCV001240621 RCV001256200 |
103 | A>V | Deafness-lymphedema-leukemia syndrome Acute myeloid leukemia [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1060500089 CA16611144 RCV000462487 |
104 | A>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000532650 CA2600043 RCV003133348 rs760660470 |
104 | A>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001542142 rs1576749168 RCV000022569 |
105 | L>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001309224 rs1435547673 |
108 | A>P | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001035443 COSM1207941 CA354407321 rs1271751829 |
109 | A>V | Deafness-lymphedema-leukemia syndrome large_intestine [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar TOPMed dbSNP gnomAD |
|
RCV001295019 rs2068697916 |
112 | H>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354407257 rs1576749120 RCV000824630 |
113 | H>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001819790 RCV001064124 rs777017660 |
113 | H>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2068697781 RCV001239903 |
114 | N>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2068697596 RCV001347743 |
118 | V>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs144794596 CA2600038 RCV002256521 RCV001816864 RCV000802400 |
120 | P>S | Deafness-lymphedema-leukemia syndrome Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs2068697462 RCV001055397 |
122 | S>C | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000459028 rs569301892 RCV000121146 CA159889 |
124 | T>K | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA354407061 COSM3427013 RCV001067794 rs569301892 RCV002292380 |
124 | T>M | Deafness-lymphedema-leukemia syndrome large_intestine Variant assessed as Somatic; impact. Myelodysplastic syndrome [ClinVar, Cosmic, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000822466 rs1576749074 CA354407018 |
127 | H>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1405092589 RCV001060446 CA354407000 |
128 | P>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000792100 CA354406932 rs1468344279 |
133 | G>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs2068696971 RCV001146584 |
133 | G>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000814315 RCV001816891 rs113166293 CA83372042 |
137 | P>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs746362966 RCV000473843 CA2600034 RCV001146583 |
138 | L>P | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA354406822 rs1576749003 RCV000797991 |
140 | V>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001237060 rs2068696200 |
142 | P>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000820962 rs1308814048 CA354406794 |
142 | P>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs747596994 RCV001054689 |
144 | A>G | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs754645961 CA2600029 RCV001211637 |
146 | G>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP |
|
rs1161655427 CA354406746 RCV001035467 |
148 | S>G | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs1184430909 RCV001247754 |
149 | G>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs753645971 RCV001821227 RCV000458357 CA2600028 RCV000765712 |
149 | G>R | Variant assessed as Somatic; 0.0 impact. Deafness-lymphedema-leukemia syndrome Acute myeloid leukemia [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001320236 rs2068695615 |
150 | G>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354406720 rs1576748936 RCV000805646 |
152 | S>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000703776 rs750384699 CA2600025 RCV001303791 |
152 | S>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP ClinGen ExAC TOPMed gnomAD |
|
RCV000801631 rs369637181 CA2600024 |
153 | G>R | Variant assessed as Somatic; 0.0 impact. Deafness-lymphedema-leukemia syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA354406710 rs1559987448 RCV001318054 |
154 | S>G | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000687105 CA354406689 rs1559987441 |
157 | A>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001327864 rs751621459 CA2600022 |
160 | T>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001762263 RCV000121147 RCV001079258 RCV000232396 RCV000389010 CA159894 rs34799090 |
161 | P>A | Deafness-lymphedema-leukemia syndrome Acute myeloid leukemia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA354406669 rs34799090 RCV000688241 |
161 | P>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001246182 rs897072411 CA83371986 |
163 | A>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001521211 RCV001711393 rs2335052 CA159904 VAR_055004 RCV001701605 RCV000332089 RCV000121149 COSM445531 |
164 | A>T | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome large_intestine breast [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000813428 rs1559987389 RCV002495140 CA354406648 |
165 | H>L | Deafness-lymphedema-leukemia syndrome Acute myeloid leukemia [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA354406647 rs887833751 CA354406646 RCV000813612 |
165 | H>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
CA2600018 COSM4138413 rs777283796 RCV001345353 |
166 | S>C | ovary Deafness-lymphedema-leukemia syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC dbSNP gnomAD |
|
CA83371955 RCV001069702 rs377261969 |
168 | S>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP TOPMed dbSNP |
|
RCV001223309 rs2068693988 |
170 | L>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001235552 rs755939655 |
175 | P>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs779526840 CA2600012 RCV000806188 |
175 | P>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1553770978 RCV000601326 CA354406583 |
176 | T>P | Monocytopenia with susceptibility to infections [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001305742 rs2068693389 TCGA novel |
178 | P>H | Deafness-lymphedema-leukemia syndrome Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinVar NCI-TCGA dbSNP |
|
RCV000703954 CA2600008 rs757177579 |
178 | P>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1559987322 RCV001281374 |
179 | K>* | multilineage dysplasia [ClinVar] | Yes |
ClinVar dbSNP |
|
rs751678435 RCV001213428 CA2600007 |
179 | K>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs751678435 RCV001312497 |
179 | K>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1028518743 RCV000821815 CA83371931 |
180 | E>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1028518743 RCV001219935 |
180 | E>G | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1060500093 CA16611252 RCV000468681 |
181 | V>M | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA354406549 RCV001239132 rs1294359651 |
182 | S>P | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001294042 rs1373180685 |
185 | P>S | Acute myeloid leukemia [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1373180685 RCV001222116 |
185 | P>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354406514 RCV000534566 rs1553770972 |
187 | T>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000984840 RCV001542184 rs1576748738 |
188 | T>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs202162468 RCV001067980 |
190 | A>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs202162468 RCV000811315 CA354406499 |
190 | A>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
RCV001058572 CA354406494 rs1355811506 |
191 | A>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs773786765 RCV000690733 CA2599998 |
192 | S>F | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001214957 rs1576748685 |
198 | A>P | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354406457 RCV000803972 rs1576748685 |
198 | A>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000649496 rs745726293 RCV002257905 CA2599993 |
198 | A>V | Deafness-lymphedema-leukemia syndrome Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA2599992 RCV000559731 rs780930549 |
199 | G>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001542188 RCV000984841 RCV001386685 rs768767517 |
200 | G>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs768767517 RCV001542189 RCV000984842 RCV000022567 RCV001386684 |
200 | G>* | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs373477245 RCV001237472 CA2599990 |
200 | G>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000817386 rs373477245 CA2599991 |
200 | G>D | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA354406428 rs1353988929 RCV001144643 RCV002032365 |
203 | A>P | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001542190 rs1576748638 RCV000984843 CA354406422 |
204 | R>* | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001204067 rs1460001422 CA354406421 |
204 | R>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs1060500087 CA16611249 RCV000467411 |
206 | E>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs2068691024 RCV001209328 |
207 | D>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA83371863 rs998737902 RCV000649495 |
209 | D>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000464423 rs765555593 CA2599986 |
210 | G>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000649504 rs1553770955 |
210 | G>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1060500088 RCV000477162 CA16611364 |
211 | V>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000809166 rs1576748594 CA354406365 |
212 | K>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA658796373 RCV000649493 RCV000984844 rs1553770949 |
219 | E>* | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs2068689916 RCV001262176 |
220 | S>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354406309 COSM320551 RCV000987326 RCV000700032 rs1252930387 |
221 | M>L | lung Deafness-lymphedema-leukemia syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar TOPMed dbSNP gnomAD |
|
CA2599980 RCV001785615 RCV000470368 rs140382420 |
223 | M>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001340003 rs146116228 |
225 | S>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA2599979 rs146116228 RCV000560625 |
225 | S>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1455317777 RCV001210988 CA354406258 |
227 | S>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs375298899 CA16611247 RCV000463273 |
228 | P>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
rs769473824 RCV000823547 CA2599977 |
230 | R>C | Variant assessed as Somatic; 0.0 impact. Deafness-lymphedema-leukemia syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
RCV000817105 rs1265283318 CA354406242 |
230 | R>H | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001327157 rs1265283318 |
230 | R>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1377041124 RCV002224073 CA354406226 RCV001345338 |
233 | L>P | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs776216814 CA2599975 RCV001214942 |
234 | A>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA2599974 rs746737860 RCV000801426 |
236 | M>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000457631 RCV000984847 rs61754578 CA2599972 |
236 | M>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000853226 CA2599973 RCV000649502 rs746737860 RCV001816621 |
236 | M>V | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs191501191 RCV000499900 RCV000371671 RCV000535107 CA2599971 RCV002502317 |
237 | G>D | Deafness-lymphedema-leukemia syndrome Acute myeloid leukemia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
TCGA novel RCV001042615 rs2068688798 |
240 | P>L | Deafness-lymphedema-leukemia syndrome Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinVar NCI-TCGA dbSNP |
|
rs2068688771 RCV001051492 |
241 | A>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs886057931 RCV000822691 CA10614773 RCV000319083 |
242 | T>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000700500 CA354406121 rs369673069 |
243 | H>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1576748504 CA354406133 RCV000804249 |
243 | H>Y | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs954005309 RCV001206349 CA83371792 |
244 | H>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001055009 rs2068688443 |
245 | P>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001231670 rs2068688361 |
247 | P>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1428619448 RCV000695588 CA354406068 |
248 | T>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001233499 rs2068688330 |
248 | T>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000121148 CA159899 RCV000261596 rs78245253 RCV000459452 RCV001657763 |
250 | P>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA2599967 rs78245253 RCV000547722 |
250 | P>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA16611142 RCV000471971 rs1060500090 |
252 | Y>C | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000022560 CA128576 RCV001541968 rs387906630 VAR_066405 |
254 | P>L | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome IMD21 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs387906630 CA354406006 RCV000694952 |
254 | P>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs2068687757 RCV001299588 |
255 | A>G | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2068687757 RCV001303568 |
255 | A>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001051938 rs1239047306 CA354405959 |
259 | D>G | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA354405962 rs768133841 RCV001240488 |
259 | D>N | Variant assessed as Somatic; 0.0 impact. Deafness-lymphedema-leukemia syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
RCV001786451 rs747128645 RCV001214932 |
260 | Y>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1576748453 RCV001234723 CA354405946 |
260 | Y>C | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1330387746 RCV001050062 |
263 | G>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000707549 CA159909 rs587778378 RCV000121150 |
263 | G>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001062048 CA354405905 rs1559986980 |
264 | L>F | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001226728 CA83371757 rs866323045 |
266 | H>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA10615220 RCV000358864 COSM3364985 rs886057930 |
267 | P>L | kidney Deafness-lymphedema-leukemia syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
RCV001211707 rs886057930 |
267 | P>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354405865 RCV000984849 RCV001542214 rs764747992 |
268 | G>* | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000797080 CA354405861 rs1576748419 |
268 | G>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000813214 rs776267955 CA2599958 |
270 | F>C | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs770511115 CA83371733 RCV001208390 |
272 | G>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000528406 CA2599957 rs770511115 |
272 | G>E | Variant assessed as Somatic; 0.0 impact. Deafness-lymphedema-leukemia syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA354405832 rs367955980 RCV001234339 CA83371738 |
272 | G>R | Variant assessed as Somatic; 0.0 impact. Deafness-lymphedema-leukemia syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen NCI-TCGA gnomAD ClinVar dbSNP |
|
rs1559986940 CA354405819 RCV000686517 |
273 | G>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001542216 rs1559986946 RCV000696729 |
274 | P>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000765711 CA2599954 rs141800945 RCV002257773 RCV000540993 RCV000502247 RCV001200274 |
277 | S>G | Deafness-lymphedema-leukemia syndrome Hereditary cancer-predisposing syndrome Acute myeloid leukemia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1576748378 RCV000987325 |
278 | F>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354405771 RCV000796875 rs1449079964 |
278 | F>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000787953 rs1576748366 |
280 | P>missing | Monocytopenia with susceptibility to infections [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001202774 rs2068685897 |
281 | K>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000800918 rs1576748346 CA354405137 |
283 | R>H | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001339547 rs797045592 |
286 | A>G | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001203272 RCV001267764 rs1443864030 |
286 | A>P | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001297125 CA354405117 rs1443864030 |
286 | A>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
CA207231 RCV000984851 RCV000193630 rs797045592 RCV001542217 |
286 | A>V | Deafness-lymphedema-leukemia syndrome Leukemia, acute myeloid, susceptibility to [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV002257935 rs1004873472 CA83371712 RCV000694812 |
287 | R>H | Deafness-lymphedema-leukemia syndrome Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1559986109 RCV000686956 |
302 | A>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001229124 CA354404802 rs1237462942 |
302 | A>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000689886 rs1559986102 CA354404705 |
307 | R>Q | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001301867 RCV001542223 rs2068661887 |
313 | H>Y | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001541969 RCV001234505 rs2068661734 |
317 | N>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001335241 RCV000800905 rs1576746862 |
324 | K>missing | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000626766 RCV001315971 rs1480450110 CA354404434 RCV000984854 |
324 | K>R | Anemia Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000793168 rs1576746847 CA354404344 COSM1207940 RCV001542110 |
330 | R>* | Deafness-lymphedema-leukemia syndrome large_intestine [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
RCV001327165 rs2068661125 |
336 | K>E | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000984812 CA128584 RCV000022571 RCV000812052 rs387906632 RCV001542112 |
337 | R>* | Deafness-lymphedema-leukemia syndrome Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
rs387906632 RCV001342280 |
337 | R>G | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1553770524 RCV000527772 CA658657335 |
340 | S>CL | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001542157 rs1576745308 RCV000984816 |
341 | A>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001324894 rs2068635788 |
341 | A>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001214332 rs2068635607 |
342 | A>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000210903 rs869320770 RCV000704724 |
342 | A>missing | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA16611241 RCV000459902 rs751285156 |
342 | A>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA2599879 rs751285156 RCV000808036 RCV001541975 |
342 | A>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs2068635493 RCV001071635 |
342 | A>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs143554523 RCV000540223 RCV003148784 CA2599878 |
342 | A>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
RCV001062521 RCV000984817 CA354413698 rs1313081073 |
343 | R>* | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1559985135 RCV001816732 RCV000704865 CA354413679 RCV001541976 |
346 | G>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1576745270 RCV000788787 RCV001541946 |
347 | T>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2068635002 RCV001057667 |
347 | T>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2068633920 RCV001316672 |
348 | C>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000987323 RCV001542202 CA354413659 rs1576745260 |
349 | C>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000987322 CA354413656 rs1576745256 |
349 | C>Y | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000984819 rs1576745252 CA354413641 RCV001542204 |
351 | N>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs797045591 RCV001542205 CA208292 RCV000194241 |
352 | C>R | Deafness-lymphedema-leukemia syndrome Leukemia, acute myeloid, susceptibility to [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000426616 RCV000022562 RCV001542226 CA128580 RCV000706855 RCV000022561 RCV000022563 VAR_066406 RCV000984820 rs387906631 |
354 | T>M | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome Myelodysplastic syndrome (mds) Variant assessed as Somatic; impact. Leukemia, acute myeloid, susceptibility to Acute myeloid leukemia Myelodysplastic syndrome IMD21 and MDS [ClinVar, Ensembl, NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl NCI-TCGA dbSNP |
|
RCV000472737 rs1060500085 CA16611238 |
355 | T>K | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
| VAR_066643 | 355 | T>del | MDS [UniProt] | Yes | UniProt |
|
CA354413606 RCV001308216 rs1468788950 |
356 | T>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000022574 RCV001542228 rs1576745225 |
358 | T>missing | Deafness-lymphedema-leukemia syndrome Myelodysplastic syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001043644 rs1174464035 |
359 | L>F | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000457272 rs1060500091 CA16611354 COSM41611 |
359 | L>V | Deafness-lymphedema-leukemia syndrome haematopoietic_and_lymphoid_tissue [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
RCV000984821 RCV000528994 CA354413577 RCV001542237 RCV003224332 rs1426175410 |
361 | R>C | Deafness-lymphedema-leukemia syndrome Acute myeloid leukemia [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
CA354413578 RCV000500143 RCV001542236 rs1426175410 |
361 | R>G | Deafness-lymphedema-leukemia syndrome Leukemia, acute myeloid, susceptibility to [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs387906634 CA128593 RCV001542238 RCV000022573 |
361 | R>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_066644 | 361 | R>P | LMPM [UniProt] | Yes | UniProt |
|
rs2068634140 RCV001547703 RCV001069965 |
362 | R>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354413573 RCV001542118 RCV001857100 RCV000504503 rs1553770510 RCV000987321 RCV000984822 |
362 | R>* | Deafness-lymphedema-leukemia syndrome Leukemia, acute myeloid, susceptibility to [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs867160952 COSM87004 CA83376555 RCV000761281 RCV001508505 RCV002533864 |
362 | R>Q | Deafness-lymphedema-leukemia syndrome Variant assessed as Somatic; impact. urinary_tract haematopoietic_and_lymphoid_tissue [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar Ensembl NCI-TCGA dbSNP |
|
rs869320734 RCV001542117 RCV000022565 |
362 | R>missing | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000811801 CA2599871 rs766504293 |
364 | A>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001204327 rs773430309 CA2599869 |
365 | N>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs2068633510 RCV001225480 |
368 | P>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001542124 CA210024 rs376003468 RCV000197751 |
371 | N>K | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs936826425 RCV001542127 RCV001049958 |
372 | A>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_066645 CA128589 RCV001543679 RCV000022572 RCV001542161 rs387906633 |
373 | C>R | Deafness-lymphedema-leukemia syndrome LMPM [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA354413496 RCV001508504 RCV000696775 rs1559985057 |
374 | G>D | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs863224874 RCV000199975 |
376 | Y>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1559984811 RCV000703003 CA354413412 |
382 | V>F | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs2068625752 RCV001214569 |
383 | N>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000545396 rs1553770444 |
387 | T>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001542174 CA16611169 RCV000459207 rs1060500092 |
387 | T>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001241681 rs2068625186 |
389 | K>TW | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1576744556 RCV001323853 |
390 | K>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000553311 rs1553770437 CA354413265 RCV001821588 |
393 | I>M | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001347483 RCV001762590 rs2068625277 |
393 | I>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354413234 COSM203766 RCV001541953 RCV000529588 RCV000984830 rs1553770434 |
396 | R>Q | Deafness-lymphedema-leukemia syndrome large_intestine Variant assessed as Somatic; impact. [ClinVar, Cosmic, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar Ensembl NCI-TCGA dbSNP |
|
RCV000984829 RCV002549629 RCV001541952 CA354413236 rs1576744529 |
396 | R>W | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001207183 CA354413213 rs1420609104 RCV001541955 |
398 | R>Q | Variant assessed as Somatic; 0.0 impact. Deafness-lymphedema-leukemia syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
|
RCV001541956 CA128572 VAR_066407 RCV001384284 RCV000984831 rs387906629 RCV000445214 RCV000502442 RCV000022559 |
398 | R>W | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome Leukemia, acute myeloid, susceptibility to Acute myeloid leukemia IMD21 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000468485 rs1060500086 CA16611352 |
400 | M>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001040634 RCV003141957 CA2599822 rs375927513 |
402 | N>S | Monocytopenia with susceptibility to infections Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
rs756096688 CA2599817 RCV000799484 |
406 | K>M | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs2068624284 RCV001312603 |
407 | S>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA354413093 RCV001298581 rs1576744467 |
408 | K>E | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA354413053 RCV000796362 rs374457534 |
411 | A>E | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000546615 RCV000765710 RCV002255458 RCV003223653 rs374457534 CA2599816 |
411 | A>V | Variant assessed as Somatic; 0.0001386 impact. Deafness-lymphedema-leukemia syndrome Hereditary cancer-predisposing syndrome Acute myeloid leukemia [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1559984721 CA354413038 RCV000687942 |
412 | E>D | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1283468852 RCV000794437 CA354413030 |
413 | C>Y | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000812900 CA2599814 rs751577185 |
414 | F>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA354413009 rs1345163538 RCV001541959 RCV000649497 |
415 | E>K | Variant assessed as Somatic; 0.0 impact. Deafness-lymphedema-leukemia syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
|
RCV000649492 CA354412989 rs1553770425 |
416 | E>D | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1553770422 RCV000558730 CA354412936 |
421 | M>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001216918 rs764442526 |
421 | M>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs758517602 CA2599811 RCV001306418 |
423 | E>K | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000542992 RCV001821589 rs146554939 RCV002255459 RCV000984833 CA2599809 |
425 | S>L | Deafness-lymphedema-leukemia syndrome Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000534788 CA354412896 rs753159607 |
425 | S>P | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001052008 rs2068623217 |
427 | P>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs909675639 CA16611345 RCV000475187 |
428 | F>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs201155045 RCV001059275 |
429 | S>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001150746 RCV000765709 RCV000502835 RCV001541960 rs201155045 RCV000463544 CA2599808 |
429 | S>T | Deafness-lymphedema-leukemia syndrome Acute myeloid leukemia [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001046047 RCV002254329 rs2068623044 |
430 | A>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000812311 CA354412821 rs1576744335 |
434 | A>P | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000815723 CA2599803 rs768399393 |
438 | A>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
TCGA novel RCV000796346 rs1576744314 CA354412785 |
439 | P>S | Deafness-lymphedema-leukemia syndrome Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar NCI-TCGA Ensembl dbSNP |
|
RCV001034955 CA83376241 rs1126559 |
440 | V>M | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000696199 CA2599798 rs781161922 |
444 | P>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001339673 rs2068622027 |
446 | F>Y | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1576744275 CA354412712 RCV000984834 RCV001541962 |
447 | S>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001764367 RCV000765708 RCV000473249 CA2599793 COSM1037983 rs370164300 |
450 | G>R | Variant assessed as Somatic; 0.0 impact. Deafness-lymphedema-leukemia syndrome endometrium Acute myeloid leukemia [NCI-TCGA, ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001350483 rs2068621583 |
454 | P>H | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA2599792 RCV000821260 rs774297463 |
454 | P>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs755408952 CA2599791 RCV001350362 |
455 | T>P | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs372912472 RCV002281090 CA2599789 RCV001821225 RCV002256240 RCV000466735 |
456 | P>L | Deafness-lymphedema-leukemia syndrome Hereditary cancer-predisposing syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs139415862 CA2599787 RCV002264975 RCV000691681 |
457 | T>M | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
RCV000538147 rs1169516070 CA354412602 |
458 | P>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs369407958 CA2599785 RCV001067819 |
459 | I>N | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
RCV001213010 CA2599784 rs369407958 |
459 | I>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
RCV000704488 rs1559984575 CA354412557 |
462 | S>Y | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs770949428 CA2599779 RCV001764366 RCV000473302 RCV001821226 RCV003153574 |
464 | S>I | GATA2 deficiency with susceptibility to MDS/AML Deafness-lymphedema-leukemia syndrome Acute myeloid leukemia [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001300014 rs2068620357 |
467 | F>missing | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001726307 CA2599777 rs777726701 RCV000696156 |
468 | G>S | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA354412489 RCV001857099 RCV000500353 rs772050518 |
469 | H>Q | Deafness-lymphedema-leukemia syndrome Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
RCV001331503 rs2068620221 |
469 | H>Y | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1449742251 RCV001349271 |
470 | P>R | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001208090 rs2068619997 |
471 | H>Y | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA500008 RCV000822451 rs779338723 |
472 | P>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000806325 CA354412431 rs1429596189 |
475 | M>L | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001202107 rs2068619532 |
476 | V>A | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2068619463 RCV001338351 |
477 | T>I | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2068619351 RCV001224679 |
478 | A>V | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001295780 rs2068619272 |
479 | M>T | Deafness-lymphedema-leukemia syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA2600127 rs17851306 |
5 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs760132552 CA2600125 |
6 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1452320871 CA354409280 |
7 | Q>H | No |
ClinGen gnomAD |
|
|
CA2600124 rs772886955 |
8 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1392814696 CA354409256 |
9 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1392814696 CA354409253 |
9 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA354409259 rs1436974541 |
9 | R>S | No |
ClinGen gnomAD |
|
|
CA2600121 rs774005466 |
11 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA354409205 rs1263269900 |
12 | A>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 13 | H>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA354409192 rs1485533975 |
13 | H>R | No |
ClinGen gnomAD |
|
|
rs780089207 CA2600118 |
14 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1413920280 CA354409167 |
15 | A>T | No |
ClinGen gnomAD |
|
|
CA2600116 rs781485787 |
16 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354409128 rs1361789790 |
19 | A>E | No |
ClinGen gnomAD |
|
| TCGA novel | 19 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA354409115 rs1303947441 |
20 | Q>R | No |
ClinGen gnomAD |
|
|
CA354409102 rs1416953141 |
21 | H>Y | No |
ClinGen gnomAD |
|
|
CA2600108 rs760183425 |
23 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1376723906 CA354409067 |
23 | D>V | No |
ClinGen TOPMed |
|
|
rs2878322 CA83372466 |
25 | H>P | No |
ClinGen gnomAD |
|
|
rs1190021538 CA354409033 |
25 | H>Q | No |
ClinGen gnomAD |
|
|
CA354409039 rs2878322 |
25 | H>R | No |
ClinGen gnomAD |
|
|
rs749879020 CA2600107 |
25 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs767260206 CA2600106 |
26 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs774249703 CA2600104 |
30 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA354408930 rs1225259829 |
31 | H>L | No |
ClinGen gnomAD |
|
|
rs1010470274 CA83372437 |
31 | H>Q | No |
ClinGen TOPMed |
|
|
CA354408919 rs1237254296 |
32 | N>S | No |
ClinGen TOPMed |
|
|
CA354408893 rs762794939 |
34 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354408849 rs1576749841 |
37 | A>T | No |
ClinGen Ensembl |
|
|
CA2600099 rs745999608 |
42 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA354408788 rs1436193518 |
42 | P>S | No |
ClinGen Ensembl |
|
|
CA2600090 rs750003894 |
60 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
CA2600088 rs761336696 |
62 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1240150433 CA354408389 |
63 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs370831063 CA2600085 |
64 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354408315 rs1390513714 |
67 | R>L | No |
ClinGen gnomAD |
|
|
rs1172408774 CA354408301 |
68 | A>G | No |
ClinGen Ensembl |
|
|
rs534541303 CA83372373 |
68 | A>S | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs534541303 CA354408308 |
68 | A>T | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA354408283 rs1457679310 |
69 | R>P | No |
ClinGen TOPMed |
|
|
rs1471015297 CA354408207 |
73 | S>N | No |
ClinGen gnomAD |
|
|
CA354408202 rs1454793467 |
73 | S>R | No |
ClinGen TOPMed |
|
|
rs776819522 CA2600081 |
74 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs770940723 CA2600080 |
76 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA354408153 rs1253694694 |
77 | A>T | No |
ClinGen gnomAD |
|
|
rs867138640 CA83372109 |
78 | R>H | No |
ClinGen gnomAD |
|
|
rs867138640 CA354407978 |
78 | R>L | No |
ClinGen gnomAD |
|
|
CA354407967 rs1476440293 |
79 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
COSM1484572 CA354407960 rs1476440293 |
79 | L>V | breast [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1274861441 CA354407940 |
80 | T>A | No |
ClinGen TOPMed |
|
|
CA354407925 rs1371798524 |
80 | T>I | No |
ClinGen gnomAD |
|
|
rs981738420 CA83372097 |
81 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA83372090 rs924409987 |
86 | R>C | No |
ClinGen Ensembl |
|
|
CA354407792 rs1260113676 |
87 | P>S | No |
ClinGen gnomAD |
|
|
CA354407779 rs1208261775 |
88 | H>Y | No |
ClinGen gnomAD |
|
|
CA2600049 rs758171435 |
92 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA354407620 rs1269493584 |
93 | P>L | No |
ClinGen gnomAD |
|
|
rs1357122451 CA354407614 |
94 | G>S | No |
ClinGen gnomAD |
|
|
CA83372083 rs868076604 |
96 | P>S | No |
ClinGen Ensembl |
|
| TCGA novel | 97 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA354407551 rs1413946801 CA354407548 |
97 | W>R | No |
ClinGen gnomAD |
|
|
rs766288736 CA2600044 |
99 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2600045 rs753611310 |
99 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1170563192 CA354407486 |
100 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1420466869 CA354407482 |
101 | G>S | No |
ClinGen gnomAD |
|
|
CA354407436 rs1186170515 |
103 | A>T | No |
ClinGen gnomAD |
|
|
rs1435547673 CA354407349 |
108 | A>T | No |
ClinGen gnomAD |
|
|
CA83372059 rs80304167 |
110 | A>P | No |
ClinGen Ensembl |
|
|
CA354407298 rs1576749129 |
111 | H>P | No |
ClinGen Ensembl |
|
|
CA354407215 rs1280330175 |
115 | P>L | No |
ClinGen gnomAD |
|
|
rs1553771050 RCV000599375 |
116 | W>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 119 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA354407135 rs1330673412 |
120 | P>L | No |
ClinGen TOPMed |
|
|
rs1163426216 CA354407024 |
127 | H>Y | No |
ClinGen gnomAD |
|
|
rs1405092589 CA354406999 |
128 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs775918028 CA2600036 |
130 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1193650911 CA354406907 |
134 | P>L | No |
ClinGen gnomAD |
|
|
RCV000984837 rs1576749014 |
136 | G>missing | No |
ClinVar dbSNP |
|
|
rs770243533 CA2600035 |
136 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354406882 rs1474520167 |
136 | G>V | No |
ClinGen gnomAD |
|
|
rs747596994 CA2600031 |
144 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs771741053 CA2600032 |
144 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs778721889 CA2600030 |
146 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA354406737 rs1184430909 |
149 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1173913751 CA354406729 |
150 | G>V | No |
ClinGen gnomAD |
|
|
rs756058583 CA2600026 |
151 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs754721904 CA83372012 |
157 | A>D | No |
ClinGen Ensembl |
|
|
CA354406673 rs1469388941 |
160 | T>P | No |
ClinGen gnomAD |
|
|
CA354406667 rs1350131138 |
161 | P>L | No |
ClinGen gnomAD |
|
|
rs34799090 CA2600020 |
161 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs770215567 CA2600019 |
162 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs17844950 CA83371982 |
164 | A>D | No |
ClinGen TOPMed |
|
|
CA83371979 rs17844950 |
164 | A>G | No |
ClinGen TOPMed |
|
|
CA354406654 rs2335052 |
164 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA83371977 rs17844950 |
164 | A>V | No |
ClinGen TOPMed |
|
|
CA2600015 rs778562222 |
168 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1392717588 CA354406624 |
169 | H>Q | No |
ClinGen gnomAD |
|
|
CA2600014 rs768236530 |
172 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354406592 rs1253079679 |
174 | P>L | No |
ClinGen gnomAD |
|
|
CA354406593 rs1487820188 |
174 | P>S | No |
ClinGen gnomAD |
|
|
rs755939655 CA2600011 |
175 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs755939655 CA354406586 RCV000984838 |
175 | P>R | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA2600010 rs750157738 |
176 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750157738 CA354406581 |
176 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA354406568 rs1559987322 |
179 | K>E | No |
ClinGen Ensembl |
|
|
CA354406551 rs1213379943 |
181 | V>G | No |
ClinGen gnomAD |
|
|
rs528737073 CA2600004 |
183 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1559987298 CA354406538 |
184 | D>H | No |
ClinGen Ensembl |
|
|
RCV000984839 rs1576748609 |
185 | P>missing | No |
ClinVar dbSNP |
|
|
CA354406531 rs1373180685 |
185 | P>A | No |
ClinGen gnomAD |
|
|
rs202162468 CA2600001 |
190 | A>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs767059760 CA2600000 |
191 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA2599999 rs761237564 |
192 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs1443381574 CA354406477 |
194 | A>S | No |
ClinGen gnomAD |
|
|
CA2599997 rs768238077 |
194 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA354406463 rs1200135021 |
196 | S>F | No |
ClinGen gnomAD |
|
|
rs142693553 CA83371884 |
197 | S>Y | No |
ClinGen ESP TOPMed |
|
|
rs780930549 CA354406449 |
199 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1576748671 CA354406452 |
199 | G>R | No |
ClinGen Ensembl |
|
|
CA354406446 rs1559987219 |
200 | G>R | No |
ClinGen Ensembl |
|
| rs768767517 | 200 | G>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| rs768767517 | 201 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765555593 CA354406382 |
210 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1576748582 RCV000984846 |
219 | E>missing | No |
ClinVar dbSNP |
|
|
CA354406322 rs1187094854 |
219 | E>A | No |
ClinGen gnomAD |
|
|
rs146116228 CA354406273 |
225 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA354406256 rs1576748559 |
227 | S>R | No |
ClinGen Ensembl |
|
|
rs375298899 CA2599978 |
228 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs769473824 CA354406246 |
230 | R>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 233 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745497331 CA2599976 |
233 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs988409355 CA83371819 |
235 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs35079193 VAR_055005 CA83371814 |
235 | T>N | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA354406114 rs1576748497 |
244 | H>P | No |
ClinGen Ensembl |
|
|
rs756555004 CA2599966 |
250 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA354406009 rs1238832083 |
254 | P>S | No |
ClinGen TOPMed |
|
|
CA354405965 rs1353328065 |
258 | H>Q | No |
ClinGen gnomAD |
|
|
rs768133841 CA2599964 |
259 | D>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 260 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA354405935 rs1559987003 |
261 | S>N | No |
ClinGen Ensembl |
|
|
rs1305082777 CA354405919 |
262 | S>I | No |
ClinGen gnomAD |
|
|
RCV000984848 CA354405922 rs1305082777 |
262 | S>N | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA354405910 rs1330387746 |
263 | G>V | No |
ClinGen gnomAD |
|
|
CA2599962 rs762191699 |
266 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA83371764 rs982084108 |
266 | H>Y | No |
ClinGen Ensembl |
|
|
CA2599960 rs764747992 |
268 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2599959 rs759006321 |
269 | G>D | No |
ClinGen ExAC |
|
|
rs1348862489 CA354405801 |
275 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1194571051 CA354405776 |
277 | S>I | No |
ClinGen gnomAD |
|
|
CA354405779 rs141800945 |
277 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1215441421 CA354405169 |
279 | T>N | No |
ClinGen gnomAD |
|
|
rs748013734 CA2599953 |
279 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA354405147 rs1576748357 RCV000984850 |
282 | Q>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
COSM1037987 rs148024280 CA2599952 |
283 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA gnomAD |
|
CA354405139 rs148024280 |
283 | R>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA2599950 rs1443864030 |
286 | A>S | No |
ClinGen TOPMed |
|
|
CA2599949 rs768892880 |
288 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs780479282 CA2599947 |
289 | C>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 290 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA354404962 rs1183274453 |
294 | E>V | No |
ClinGen gnomAD |
|
|
RCV000984853 rs1576746931 |
297 | N>missing | No |
ClinVar dbSNP |
|
|
rs1559986113 CA354404818 |
301 | T>I | No |
ClinGen Ensembl |
|
|
CA354404797 rs1576746913 |
303 | T>P | No |
ClinGen Ensembl |
|
|
CA354404670 rs1576746908 |
309 | D>G | No |
ClinGen Ensembl |
|
|
rs1287554701 CA354404648 |
310 | G>A | No |
ClinGen gnomAD |
|
|
CA354404655 rs1262581730 |
310 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs767135651 CA2599916 |
311 | T>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 312 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA83370792 rs866549293 |
312 | G>D | No |
ClinGen Ensembl |
|
|
rs1576746883 COSM249852 CA354404538 |
317 | N>H | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs1559986079 CA354404492 |
320 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 322 | Y>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1442352352 CA354404450 |
323 | H>R | No |
ClinGen gnomAD |
|
|
rs1576746848 RCV000788382 |
327 | G>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 328 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745439347 CA354413709 |
340 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs745439347 CA2599882 |
340 | S>W | No |
ClinGen ExAC gnomAD |
|
|
CA354413690 rs1559985140 |
344 | R>I | No |
ClinGen Ensembl |
|
|
CA354413688 rs1559985140 |
344 | R>K | No |
ClinGen Ensembl |
|
|
rs1576745241 RCV000984818 |
346 | G>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 351 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 352 | C>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 354 | T>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 358 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA83376558 rs148942346 |
358 | T>I | No |
ClinGen ESP |
|
|
CA354413563 rs753914237 |
363 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2599870 rs574262238 |
364 | A>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs758912342 COSM3427012 CA83376544 |
366 | G>R | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1386754402 CA354413545 |
367 | D>Y | No |
ClinGen gnomAD |
|
|
rs936826425 CA83376538 |
372 | A>P | No |
ClinGen TOPMed |
|
|
rs750890699 RCV000984823 CA354413481 |
376 | Y>* | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
COSM255198 CA2599864 rs749819993 |
379 | L>Q | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA354413409 rs1240484231 |
382 | V>A | No |
ClinGen gnomAD |
|
|
CA354413370 rs1488596414 |
386 | L>V | No |
ClinGen TOPMed |
|
|
rs1576744575 RCV000984826 |
388 | M>missing | No |
ClinVar dbSNP |
|
|
rs1576744556 RCV000984827 |
389 | K>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 389 | K>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777230453 CA2599824 |
392 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1190938460 CA354413245 |
395 | T>S | No |
ClinGen TOPMed |
|
|
rs1576744529 CA354413238 RCV000984828 |
396 | R>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA83376298 rs371096438 |
399 | K>N | No |
ClinGen ESP TOPMed |
|
|
CA354413201 rs1362694541 |
399 | K>R | No |
ClinGen gnomAD |
|
|
CA2599819 rs779797858 CA2599818 |
405 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs768183373 CA2599820 |
405 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA354413103 rs1166927998 |
407 | S>N | No |
ClinGen gnomAD |
|
|
CA354413067 rs1267186423 |
410 | G>R | No |
ClinGen gnomAD |
|
|
CA354413028 rs1283468852 |
413 | C>F | No |
ClinGen gnomAD |
|
| TCGA novel | 415 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1037327872 CA83376272 |
420 | C>Y | No |
ClinGen Ensembl |
|
|
CA2599812 rs764442526 |
421 | M>V | No |
ClinGen ExAC gnomAD |
|
| rs1278525191 | 423 | E>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2599810 rs753159607 |
425 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1576744367 CA354412889 |
426 | S>P | No |
ClinGen Ensembl |
|
|
rs777283732 CA2599807 |
429 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA2599805 rs761447305 |
432 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA354412822 rs1576744341 |
433 | L>R | No |
ClinGen Ensembl |
|
|
rs773731858 CA2599804 |
436 | H>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 438 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762576353 CA2599802 |
439 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1009940359 CA83376238 |
442 | H>P | No |
ClinGen Ensembl |
|
|
CA354412735 rs781161922 |
444 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2599799 rs745601795 |
444 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs976064371 CA83376225 |
445 | P>L | No |
ClinGen Ensembl |
|
|
CA2599796 rs747150675 |
447 | S>I | No |
ClinGen ExAC |
|
|
rs1338194519 CA354412703 |
447 | S>R | No |
ClinGen gnomAD |
|
|
rs755408952 CA354412629 |
455 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA2599790 rs754242887 |
455 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA2599783 COSM479377 rs769419116 |
460 | H>P | kidney [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA354412583 rs1238852620 |
460 | H>Y | No |
ClinGen gnomAD |
|
|
CA354412577 rs1238679450 |
461 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA354412558 rs759392299 |
462 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759392299 CA2599782 |
462 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM2150671 CA2599781 rs200597976 |
463 | S>P | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1559984558 CA354412525 |
465 | L>P | No |
ClinGen Ensembl |
|
|
CA354412502 rs777726701 |
468 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1576744134 CA354412495 |
469 | H>P | No |
ClinGen Ensembl |
|
|
rs1449742251 CA354412482 |
470 | P>L | No |
ClinGen gnomAD |
|
|
CA354412472 rs1398739326 |
471 | H>P | No |
ClinGen gnomAD |
|
|
CA354412470 rs1398739326 |
471 | H>R | No |
ClinGen gnomAD |
|
| TCGA novel | 471 | H>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2599775 rs779338723 |
472 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1228557730 CA354412442 |
474 | S>T | No |
ClinGen TOPMed |
|
|
CA354412433 rs1429596189 |
475 | M>V | No |
ClinGen gnomAD |
|
|
rs1161135105 CA354412419 |
476 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA2599772 rs780263343 |
478 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs997564421 CA83376177 CA83376175 COSM305566 |
479 | M>I | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs901948475 CA83376173 |
480 | G>C | No |
ClinGen TOPMed |
3 associated diseases with P23769
[MIM: 614172]: Immunodeficiency 21 (IMD21)
An immunodeficiency disease characterized by profoundly decreased or absent monocytes, B-lymphocytes, natural killer lymphocytes, and circulating and tissue dendritic cells, with little or no effect on T-cell numbers. Clinical features of DCML include susceptibility to disseminated non-tuberculous mycobacterial infections, papillomavirus infections, opportunistic fungal infections, and pulmonary alveolar proteinosis. Bone marrow hypocellularity and dysplasia of myeloid, erythroid, and megakaryocytic lineages are present in most patients, as are karyotypic abnormalities, including monosomy 7 and trisomy 8. This syndrome links susceptibility to mycobacterial, viral, and fungal infections with malignancy and can be transmitted in an autosomal dominant pattern. {ECO:0000269|PubMed:21670465}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 614038]: Lymphedema, primary, with myelodysplasia (LMPM)
A chronic disabling condition characterized by swelling of the extremities due to altered lymphatic flow, associated with myelodysplasia. Patients with lymphedema suffer from recurrent local infections, and physical impairment. {ECO:0000269|PubMed:21892158}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 614286]: Myelodysplastic syndrome (MDS)
A heterogeneous group of closely related clonal hematopoietic disorders. All are characterized by a hypercellular or hypocellular bone marrow with impaired morphology and maturation, dysplasia of the myeloid, megakaryocytic and/or erythroid lineages, and peripheral blood cytopenias resulting from ineffective blood cell production. Included diseases are
Without disease ID
- An immunodeficiency disease characterized by profoundly decreased or absent monocytes, B-lymphocytes, natural killer lymphocytes, and circulating and tissue dendritic cells, with little or no effect on T-cell numbers. Clinical features of DCML include susceptibility to disseminated non-tuberculous mycobacterial infections, papillomavirus infections, opportunistic fungal infections, and pulmonary alveolar proteinosis. Bone marrow hypocellularity and dysplasia of myeloid, erythroid, and megakaryocytic lineages are present in most patients, as are karyotypic abnormalities, including monosomy 7 and trisomy 8. This syndrome links susceptibility to mycobacterial, viral, and fungal infections with malignancy and can be transmitted in an autosomal dominant pattern. {ECO:0000269|PubMed:21670465}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A chronic disabling condition characterized by swelling of the extremities due to altered lymphatic flow, associated with myelodysplasia. Patients with lymphedema suffer from recurrent local infections, and physical impairment. {ECO:0000269|PubMed:21892158}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A heterogeneous group of closely related clonal hematopoietic disorders. All are characterized by a hypercellular or hypocellular bone marrow with impaired morphology and maturation, dysplasia of the myeloid, megakaryocytic and/or erythroid lineages, and peripheral blood cytopenias resulting from ineffective blood cell production. Included diseases are
2 regional properties for P23769
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Zinc finger, GATA-type | 289 - 344 | IPR000679-1 |
| domain | Zinc finger, GATA-type | 343 - 398 | IPR000679-2 |
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| transcription regulator complex | A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription. |
11 GO annotations of molecular function
| Name | Definition |
|---|---|
| C2H2 zinc finger domain binding | Binding to a C2H2-type zinc finger domain of a protein. The C2H2 zinc finger is the classical zinc finger domain, in which two conserved cysteines and histidines co-ordinate a zinc ion. |
| chromatin binding | Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
| DNA-binding transcription activator activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets transcribed by RNA polymerase II. |
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
| DNA-binding transcription factor activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II. |
| RNA polymerase II cis-regulatory region sequence-specific DNA binding | Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II. |
| RNA polymerase II-specific DNA-binding transcription factor binding | Binding to a sequence-specific DNA binding RNA polymerase II transcription factor, any of the factors that interact selectively and non-covalently with a specific DNA sequence in order to modulate transcription. |
| sequence-specific double-stranded DNA binding | Binding to double-stranded DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA, e.g. promotor binding or rDNA binding. |
| transcription coactivator binding | Binding to a transcription coactivator, a protein involved in positive regulation of transcription via protein-protein interactions with transcription factors and other proteins that positively regulate transcription. Transcription coactivators do not bind DNA directly, but rather mediate protein-protein interactions between activating transcription factors and the basal transcription machinery. |
| transcription coregulator binding | Binding to a transcription coregulator, a protein involved in regulation of transcription via protein-protein interactions with transcription factors and other transcription regulatory proteins. Cofactors do not bind DNA directly, but rather mediate protein-protein interactions between regulatory transcription factors and the basal transcription machinery. |
| zinc ion binding | Binding to a zinc ion (Zn). |
54 GO annotations of biological process
| Name | Definition |
|---|---|
| brown fat cell differentiation | The process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria. |
| cell differentiation in hindbrain | The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mature cells of the hindbrain. Differentiation includes the processes involved in commitment of a cell to a specific fate. |
| cell fate commitment | The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field. |
| cell fate determination | A process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment. |
| central nervous system neuron development | The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron. |
| cochlea development | The progression of the cochlea over time from its formation to the mature structure. The cochlea is the snail-shaped portion of the inner ear that is responsible for the detection of sound. |
| commitment of neuronal cell to specific neuron type in forebrain | The commitment of neuronal precursor cells to become specialized types of neurons in the forebrain. |
| definitive hemopoiesis | A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood. |
| embryonic placenta development | The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin. |
| eosinophil fate commitment | The process in which the developmental fate of a cell becomes restricted such that it will develop into a eosinophil cell. A eosinophil is any of the immature or mature forms of a granular leukocyte with a nucleus that usually has two lobes connected by one or more slender threads of chromatin, and cytoplasm containing coarse, round granules that are uniform in size and which can be stained by the dye eosin. |
| GABAergic neuron differentiation | The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic neuron. |
| glandular epithelial cell maturation | The developmental process, independent of morphogenetic (shape) change, that is required for a glandular epithelial cell to attain its fully functional state. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland. |
| hematopoietic progenitor cell differentiation | The process in which precursor cell type acquires the specialized features of a hematopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells. |
| hematopoietic stem cell homeostasis | Any biological process involved in the maintenance of the steady-state number of hematopoietic stem cells within a population of cells. |
| homeostasis of number of cells within a tissue | Any biological process involved in the maintenance of the steady-state number of cells within a population of cells in a tissue. |
| inner ear morphogenesis | The process in which the anatomical structures of the inner ear are generated and organized. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively. |
| negative regulation of brown fat cell differentiation | Any process that stops, prevents or reduces the frequency, rate or extent of brown fat cell differentiation. |
| negative regulation of endothelial cell apoptotic process | Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell apoptotic process. |
| negative regulation of fat cell differentiation | Any process that stops, prevents, or reduces the frequency, rate or extent of adipocyte differentiation. |
| negative regulation of fat cell proliferation | Any process that stops or decreases the rate or extent of fat cell proliferation. |
| negative regulation of gene expression | Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). |
| negative regulation of hematopoietic progenitor cell differentiation | Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic progenitor cell differentiation. |
| negative regulation of macrophage differentiation | Any process that stops, prevents, or reduces the frequency, rate or extent of macrophage differentiation. |
| negative regulation of neural precursor cell proliferation | Any process that stops, prevents, or reduces the frequency, rate or extent of neural precursor cell proliferation. |
| negative regulation of Notch signaling pathway | Any process that stops, prevents, or reduces the frequency, rate or extent of the Notch signaling pathway. |
| negative regulation of transcription by RNA polymerase II | Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II. |
| neural precursor cell proliferation | The multiplication or reproduction of neural precursor cells, resulting in the expansion of a cell population. A neural precursor cell is either a nervous system stem cell or a nervous system progenitor cell. |
| neuron migration | The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature. |
| phagocytosis | A vesicle-mediated transport process that results in the engulfment of external particulate material by phagocytes and their delivery to the lysosome. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles. |
| positive regulation of angiogenesis | Any process that activates or increases angiogenesis. |
| positive regulation of blood vessel endothelial cell migration | Any process that activates or increases the frequency, rate or extent of the migration of the endothelial cells of blood vessels. |
| positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis | Any process that activates or increases the frequency, rate or extent of blood vessel endothelial cell proliferation involved in sprouting angiogenesis. |
| positive regulation of cell migration involved in sprouting angiogenesis | Any process that increases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis. |
| positive regulation of cytosolic calcium ion concentration | Any process that increases the concentration of calcium ions in the cytosol. |
| positive regulation of erythrocyte differentiation | Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation. |
| positive regulation of gene expression | Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). |
| positive regulation of mast cell degranulation | Any process that activates or increases the frequency, rate or extent of mast cell degranulation. |
| positive regulation of megakaryocyte differentiation | Any process that activates or increases the frequency, rate or extent of megakaryocyte differentiation. |
| positive regulation of miRNA transcription | Any process that activates or increases the frequency, rate or extent of microRNA (miRNA) gene transcription. |
| positive regulation of neuron differentiation | Any process that activates or increases the frequency, rate or extent of neuron differentiation. |
| positive regulation of phagocytosis | Any process that activates or increases the frequency, rate or extent of phagocytosis. |
| positive regulation of phagocytosis, engulfment | Any process that activates or increases the frequency, rate or extent of the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis. |
| positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. |
| regulation of forebrain neuron differentiation | Any process that modulates the frequency, rate or extent of forebrain neuron differentiation. |
| regulation of histone acetylation | Any process that modulates the frequency, rate or extent of the addition of an acetyl group to a histone protein. |
| regulation of primitive erythrocyte differentiation | Any process that modulates the rate, frequency, or extent of primitive erythrocyte differentiation. Primitive erythrocyte differentiation occurs as part of the process of primitive hemopoiesis. |
| response to lipid | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus. |
| semicircular canal development | The progression of the semicircular canal from its initial formation to the mature structure. |
| somatic stem cell population maintenance | Any process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line. |
| thyroid-stimulating hormone-secreting cell differentiation | The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a thyroid-stimulating hormone-secreting cell. A thyroid-stimulating hormone-secreting cell is a basophil cell of the anterior pituitary that produces thyroid-stimulating hormone, thyrotrophin. |
| transcription by RNA polymerase II | The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs). |
| urogenital system development | The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure. |
| vascular wound healing | Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature. |
| ventral spinal cord interneuron differentiation | The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of ventral spinal cord interneurons. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses. Differentiation includes the processes involved in commitment of a cell to a specific fate. |
18 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| O09100 | Gata2 | Endothelial transcription factor GATA-2 | Mus musculus (Mouse) | PR |
| Q942A1 | RR4 | Two-component response regulator ORR4 | Oryza sativa subsp japonica (Rice) | PR |
| Q6H468 | RR11 | Two-component response regulator ORR11 | Oryza sativa subsp japonica (Rice) | PR |
| Q0PVB3 | RR7 | Two-component response regulator ORR7 | Oryza sativa subsp japonica (Rice) | PR |
| Q7Y0W5 | EHD1 | Two-component response regulator ORR30 | Oryza sativa subsp japonica (Rice) | PR |
| Q9ZWS9 | ARR3 | Two-component response regulator ARR3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FXD6 | ARR11 | Two-component response regulator ARR11 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SKN6 | GATA13 | Putative GATA transcription factor 13 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LT45 | GATA29 | GATA transcription factor 29 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SB04 | ARR5 | Two-component response regulator ARR5 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O80366 | ARR9 | Two-component response regulator ARR9 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q6LA43 | APRR2 | Two-component response regulator-like APRR2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L4M6 | GATA3 | GATA transcription factor 3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O65515 | GATA7 | GATA transcription factor 7 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q93WK5 | APRR7 | Two-component response regulator-like APRR7 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FJ16 | APRR4 | Putative two-component response regulator-like APRR4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LVG4 | APRR3 | Two-component response regulator-like APRR3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LKL2 | APRR1 | Two-component response regulator-like APRR1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEVAPEQPRW | MAHPAVLNAQ | HPDSHHPGLA | HNYMEPAQLL | PPDEVDVFFN | HLDSQGNPYY |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ANPAHARARV | SYSPAHARLT | GGQMCRPHLL | HSPGLPWLDG | GKAALSAAAA | HHHNPWTVSP |
| 130 | 140 | 150 | 160 | 170 | 180 |
| FSKTPLHPSA | AGGPGGPLSV | YPGAGGGSGG | GSGSSVASLT | PTAAHSGSHL | FGFPPTPPKE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VSPDPSTTGA | ASPASSSAGG | SAARGEDKDG | VKYQVSLTES | MKMESGSPLR | PGLATMGTQP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| ATHHPIPTYP | SYVPAAAHDY | SSGLFHPGGF | LGGPASSFTP | KQRSKARSCS | EGRECVNCGA |
| 310 | 320 | 330 | 340 | 350 | 360 |
| TATPLWRRDG | TGHYLCNACG | LYHKMNGQNR | PLIKPKRRLS | AARRAGTCCA | NCQTTTTTLW |
| 370 | 380 | 390 | 400 | 410 | 420 |
| RRNANGDPVC | NACGLYYKLH | NVNRPLTMKK | EGIQTRNRKM | SNKSKKSKKG | AECFEELSKC |
| 430 | 440 | 450 | 460 | 470 | |
| MQEKSSPFSA | AALAGHMAPV | GHLPPFSHSG | HILPTPTPIH | PSSSLSFGHP | HPSSMVTAMG |