Q9S7N9
Gene name |
CID12 (RBP37, At4g10610, F3H7.12, T4F9.70) |
Protein name |
Polyadenylate-binding protein-interacting protein 12 |
Names |
PABP-interacting protein 12, Poly(A)-binding protein-interacting protein 12, PAM2-containing protein CID12, Protein CTC-INTERACTING DOMAIN 12, RNA-binding protein 37, AtRBP37 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT4G10610 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9S7N9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9S7N9-F1 | Predicted | AlphaFoldDB |
27 variants for Q9S7N9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_4_6557352_G_A | 6 | S>N | No | 1000Genomes | |
| tmp_4_6557361_C_T | 9 | A>V | No | 1000Genomes | |
| ENSVATH00487038 | 10 | N>K | No | 1000Genomes | |
| tmp_4_6557364_A_C | 10 | N>T | No | 1000Genomes | |
| ENSVATH06606371 | 11 | T>I | No | 1000Genomes | |
| tmp_4_6557370_C_T | 12 | T>I | No | 1000Genomes | |
| ENSVATH06606372 | 16 | G>A | No | 1000Genomes | |
| ENSVATH06606373 | 24 | P>S | No | 1000Genomes | |
| ENSVATH06606375 | 34 | A>V | No | 1000Genomes | |
| tmp_4_6557441_T_A | 36 | S>T | No | 1000Genomes | |
| tmp_4_6557454_A_T | 40 | H>L | No | 1000Genomes | |
| ENSVATH11458102 | 44 | G>E | No | 1000Genomes | |
| tmp_4_6557475_A_T | 47 | D>V | No | 1000Genomes | |
| tmp_4_6557478_A_G | 48 | E>G | No | 1000Genomes | |
| ENSVATH11458103 | 62 | F>C | No | 1000Genomes | |
| tmp_4_6557556_C_T | 74 | S>F | No | 1000Genomes | |
| ENSVATH00487039 | 84 | I>V | No | 1000Genomes | |
| ENSVATH02778227 | 114 | P>A | No | 1000Genomes | |
| tmp_4_6557678_G_A | 115 | V>I | No | 1000Genomes | |
| ENSVATH02778230 | 120 | S>G | No | 1000Genomes | |
| tmp_4_6557884_C_G | 127 | F>L | No | 1000Genomes | |
| ENSVATH06606385 | 152 | V>I | No | 1000Genomes | |
| tmp_4_6558243_A_G | 194 | I>V | No | 1000Genomes | |
| ENSVATH11458210 | 255 | D>E | No | 1000Genomes | |
| ENSVATH11458214 | 283 | Y>H | No | 1000Genomes | |
| ENSVATH14125392 | 318 | V>M | No | 1000Genomes | |
| tmp_4_6559109_G_A | 326 | R>H | No | 1000Genomes |
No associated diseases with Q9S7N9
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| nucleotide binding | Binding to a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
8 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8N9W6 | BOLL | Protein boule-like | Homo sapiens (Human) | PR |
| P42696 | RBM34 | RNA-binding protein 34 | Homo sapiens (Human) | PR |
| Q05CL8 | Larp7 | La-related protein 7 | Mus musculus (Mouse) | PR |
| Q924M5 | Boll | Protein boule-like | Mus musculus (Mouse) | PR |
| Q8C854 | Myef2 | Myelin expression factor 2 | Mus musculus (Mouse) | PR |
| Q5XI01 | Larp7 | La-related protein 7 | Rattus norvegicus (Rat) | PR |
| Q93ZV7 | LA1 | La protein 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q4KM14 | trnau1apl | tRNA selenocysteine 1-associated protein 1-like | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAVIESVGAN | TTVEAGGLIS | PSPPSSVTSQ | ESGASSNNDH | GGNGIHDEIG | VHVARSDGGE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SFKRDMRELH | ELLSKLNPMA | KEFIPPSLTK | PVVNGFNGGF | FAVNNGFVAA | GNFPVNEDGS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| FRRKKSFGQQ | GKRRMNPRTS | LAQREEIIRR | TVYVSDIDQQ | VTEEQLAGLF | IGFGQVVDCR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ICGDPNSVLR | FAFIEFTDEV | GARTALNLSG | TMLGFYPVKV | MPSKTAIAPV | NPTFLPRTED |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EREMCARTIY | CTNIDKKLTQ | TDIKLFFESV | CGEVYRLRLL | GDYHHPTRIG | FVEFVMAESA |
| 310 | 320 | 330 | |||
| IAALNCSGVL | LGSLPIRVSP | SKTPVRSRAI | PRHQMH |