P42696
Gene name |
RBM34 (KIAA0117) |
Protein name |
RNA-binding protein 34 |
Names |
RNA-binding motif protein 34 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:23029 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P42696
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P42696-F1 | Predicted | AlphaFoldDB |
375 variants for P42696
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA1462631 rs774293792 |
2 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344928938 rs1379125115 |
2 | A>P | No |
ClinGen TOPMed |
|
|
rs774293792 CA1462630 |
2 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773435782 CA1462627 |
3 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA1462626 rs375853795 |
3 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs773435782 CA344928917 |
3 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs139917557 CA1462623 |
5 | G>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139917557 CA1462624 |
5 | G>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM163952 CA1462621 CA39565939 CA39565929 rs370358826 |
6 | M>I | Variant assessed as Somatic; 0.0 impact. lung breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD NCI-TCGA |
|
CA1462622 rs746595883 |
6 | M>K | No |
ClinGen ExAC gnomAD |
|
|
CA344928833 rs1329280722 |
7 | S>N | No |
ClinGen gnomAD |
|
|
CA1462620 rs758119068 |
7 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs549912946 CA1462619 |
8 | K>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs549912946 CA1462618 |
8 | K>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs756472580 CA1462617 |
8 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs752999355 CA344928785 |
9 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752999355 CA1462616 |
9 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462615 TCGA novel rs768081641 |
10 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen ExAC gnomAD |
|
CA344928737 rs1159513135 |
11 | R>G | No |
ClinGen gnomAD |
|
|
rs189294443 CA1462613 |
11 | R>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs189294443 CA39565899 COSM1501729 |
11 | R>T | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs200635285 CA1462611 |
12 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1462609 rs765499478 |
13 | R>I | No |
ClinGen ExAC gnomAD |
|
|
CA1462610 rs765499478 |
13 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs776561958 CA1462607 |
14 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462605 rs202101761 |
15 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462606 rs202101761 |
15 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1199680934 CA344928619 |
16 | Q>* | No |
ClinGen gnomAD |
|
|
CA344928617 rs771509030 |
16 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA1462602 rs771509030 |
16 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA344928618 rs771509030 |
16 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 17 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA344928599 rs745306306 |
17 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745306306 CA1462601 |
17 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs903647965 CA39565656 |
20 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA1462579 rs748965587 |
20 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344928424 rs1301117259 |
21 | P>A | No |
ClinGen TOPMed |
|
|
CA1462578 rs777368645 |
21 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1207173754 CA344928370 |
23 | D>G | No |
ClinGen gnomAD |
|
|
rs747342439 CA1462576 |
23 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376433562 CA1462575 |
24 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1462574 rs758941421 |
26 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA1462573 rs750569191 |
28 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1354516209 CA344928286 |
28 | S>T | No |
ClinGen gnomAD |
|
|
CA344928255 rs1234350078 |
30 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 31 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779112192 CA1462572 |
33 | Y>C | No |
ClinGen ExAC |
|
|
rs757363199 CA344928110 |
37 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344928101 rs1571867497 |
38 | V>G | No |
ClinGen Ensembl |
|
|
CA344928090 rs1322308950 |
39 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA344928070 rs1396296367 |
40 | S>N | No |
ClinGen gnomAD |
|
|
rs1307667292 CA344928020 |
44 | R>P | No |
ClinGen TOPMed |
|
|
CA1462568 rs760397557 |
45 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1419233603 CA344927905 |
51 | G>S | No |
ClinGen gnomAD |
|
|
CA39565568 rs1023803626 |
53 | T>A | No |
ClinGen TOPMed |
|
|
rs767397743 CA1462566 |
53 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 54 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1462564 rs112038793 |
54 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA344927833 rs1214525542 |
55 | R>G | No |
ClinGen gnomAD |
|
|
rs747400589 CA1462559 |
57 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772864795 CA1462561 |
57 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs747400589 CA1462560 |
57 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1571867294 CA344927788 |
58 | S>A | No |
ClinGen Ensembl |
|
|
CA1462557 rs772503203 |
58 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA1462556 rs746399225 |
59 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344927765 rs1467321662 |
60 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA344927764 rs1467321662 |
60 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
rs757412621 CA1462554 |
62 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs757412621 CA344927728 |
62 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA1462552 rs777912571 |
66 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs756352943 CA1462551 |
68 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344927599 rs1271334537 |
70 | V>A | No |
ClinGen TOPMed |
|
|
CA1462550 rs752487204 |
70 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462547 rs188788611 |
73 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs181926176 CA1462548 |
73 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1462543 rs184349413 |
75 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA344927508 rs184349413 |
75 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs772707307 CA1462544 |
75 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344927494 rs1278619395 |
76 | K>* | No |
ClinGen gnomAD |
|
|
CA1462523 rs199976960 |
78 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1462524 rs199976960 |
78 | T>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA344927334 rs201921614 |
79 | I>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201921614 CA1462522 |
79 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs950468717 CA39565181 |
80 | K>E | No |
ClinGen Ensembl |
|
| rs768846936 | 82 | T>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774851152 CA1462517 |
84 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771603978 CA1462516 |
87 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA344927046 rs1205066459 |
89 | E>Q | No |
ClinGen gnomAD |
|
|
rs773553793 CA1462514 |
90 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs1252562505 CA344926986 |
91 | T>P | No |
ClinGen gnomAD |
|
|
CA1462513 rs370731964 |
94 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1462512 rs781538865 |
96 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781538865 CA1462511 |
96 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1291035941 CA344926771 |
97 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA1462509 rs746849926 |
97 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA1462510 rs746849926 |
97 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA344926774 rs1291035941 |
97 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs758137954 CA1462507 |
98 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344926729 rs1389619241 |
99 | S>* | No |
ClinGen gnomAD |
|
|
rs1416567704 CA344926675 |
100 | Q>R | No |
ClinGen TOPMed |
|
|
rs1480414888 CA344926607 |
102 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1480414888 CA344926615 |
102 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs377392338 CA1462505 |
103 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1014382139 CA344926526 |
104 | K>E | No |
ClinGen gnomAD |
|
|
CA39565116 rs1014382139 |
104 | K>Q | No |
ClinGen gnomAD |
|
|
rs1349563384 CA344926484 |
106 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1349563384 CA344926485 |
106 | V>M | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 108 | A>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs753274337 CA1462503 |
109 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462502 rs763904856 |
112 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA1462501 rs760370786 |
115 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs747042720 | 118 | K>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 119 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1462496 rs773783255 |
120 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA344925978 rs1261719867 |
121 | D>G | No |
ClinGen TOPMed |
|
|
rs778288823 CA344925966 |
122 | R>G | No |
ClinGen Ensembl |
|
|
rs1447924291 CA344925962 |
122 | R>K | No |
ClinGen TOPMed |
|
|
CA344923799 rs1251594884 |
124 | S>N | No |
ClinGen gnomAD |
|
|
rs752241692 CA1462462 |
125 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA39561633 rs372028134 |
126 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA344923724 rs375256617 |
127 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375256617 CA1462460 |
127 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs901602018 CA39561623 |
128 | S>R | No |
ClinGen Ensembl |
|
|
rs1278266934 CA344923690 |
128 | S>T | No |
ClinGen gnomAD |
|
|
rs765545776 CA1462458 |
129 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs1335821934 CA344923667 |
129 | A>V | No |
ClinGen gnomAD |
|
|
rs529422842 CA1462457 |
131 | L>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs764523518 CA1462455 |
132 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764523518 CA344923620 |
132 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372206805 CA1462454 |
133 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344923564 rs1327691862 |
134 | E>Q | No |
ClinGen TOPMed |
|
|
rs1399874062 CA344923547 |
135 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
rs369556503 CA1462453 |
136 | H>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369556503 CA344923536 |
136 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375100629 CA1462452 |
138 | K>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs368492848 CA39561579 |
140 | G>E | No |
ClinGen ESP |
|
|
CA1462451 CA344923462 rs371923949 |
140 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1471231724 CA344923426 |
141 | Q>R | No |
ClinGen gnomAD |
|
|
CA1462450 rs774582552 |
142 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770638100 CA1462449 |
142 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs374619059 CA1462448 |
145 | N>I | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 145 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 146 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1462446 rs769851068 |
147 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs1222830913 CA344923265 |
149 | G>V | No |
ClinGen gnomAD |
|
|
CA1462444 rs200657743 |
152 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1462443 rs780831112 |
156 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA1462442 rs754464502 |
157 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1221423941 CA344923016 |
159 | D>Y | No |
ClinGen TOPMed |
|
|
rs746674830 CA1462441 |
160 | D>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 161 | T>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1462439 rs199826982 |
163 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs754184060 CA1462438 |
164 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1326127708 CA344922916 |
165 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1429848276 CA344922878 |
167 | S>R | No |
ClinGen gnomAD |
|
|
CA344922843 rs1386433599 |
169 | R>I | No |
ClinGen TOPMed |
|
|
CA1462435 rs756581141 |
170 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752823459 CA1462434 |
171 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs906098978 CA344922811 |
172 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA344922814 rs906098978 |
172 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
CA39561515 rs906098978 |
172 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1452631141 CA344922792 |
173 | Q>E | No |
ClinGen gnomAD |
|
|
CA344922785 rs373929216 |
173 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344922788 rs1397196263 |
173 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA1462432 rs759620209 |
175 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1239969577 CA344922680 |
177 | E>A | No |
ClinGen TOPMed |
|
|
CA1462429 rs370629801 |
178 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA1462428 rs773113664 |
179 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs776594400 CA1462425 |
182 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462423 rs768052595 |
184 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs950057509 CA39561463 |
186 | T>S | No |
ClinGen Ensembl |
|
|
rs1293072876 CA344922514 |
187 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA344922498 rs1197311942 |
188 | F>C | No |
ClinGen TOPMed |
|
|
rs1271743232 CA344922481 |
189 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs755080982 CA39561453 |
189 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA39561458 rs755080982 |
189 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755080982 CA1462422 |
189 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754012030 CA1462421 |
190 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs917341772 CA39561424 |
192 | L>F | No |
ClinGen Ensembl |
|
|
CA344922357 rs1433005906 |
196 | C>F | No |
ClinGen gnomAD |
|
|
rs749691967 CA1462419 |
197 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA344921692 rs771759839 |
201 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
CA1462398 rs771759839 |
201 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA1462396 rs778495315 |
203 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA344921653 rs1479352779 |
203 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
CA344921617 rs1192429744 |
204 | F>L | No |
ClinGen gnomAD |
|
|
rs1333621097 CA344921592 |
205 | F>L | No |
ClinGen gnomAD |
|
|
CA1462394 rs374101025 |
208 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1462393 rs781617624 |
213 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA344921435 rs781617624 |
213 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs377072609 CA39559785 |
215 | R>* | No |
ClinGen ESP gnomAD |
|
|
rs1228009308 CA344921410 |
215 | R>P | No |
ClinGen TOPMed |
|
|
CA1462391 rs751640675 |
217 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs372663591 CA1462390 |
217 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1208136183 CA344921364 |
218 | S>F | No |
ClinGen TOPMed |
|
| TCGA novel | 220 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1462363 rs752682269 |
223 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1374639646 CA344920436 |
224 | G>R | No |
ClinGen TOPMed |
|
|
CA1462361 rs759114699 |
225 | T>A | No |
ClinGen ExAC |
|
|
rs374546141 CA1462360 |
225 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA344920407 rs762689756 |
226 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA1462358 rs762689756 |
226 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA344920354 rs1391244067 |
230 | L>F | No |
ClinGen gnomAD |
|
|
CA1462354 rs747281847 |
231 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs747281847 CA344920350 |
231 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs776193387 CA1462353 |
232 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372922102 CA1462326 |
235 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1462325 rs775961717 |
235 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1268535863 CA344941602 |
238 | H>L | No |
ClinGen TOPMed gnomAD |
|
|
CA344941617 rs267598423 |
238 | H>N | No |
ClinGen gnomAD |
|
|
CA39583459 rs267598423 |
238 | H>Y | No |
ClinGen gnomAD |
|
|
rs760139583 CA1462324 |
239 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462322 rs774957624 COSM1501730 |
239 | P>R | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs760139583 CA1462323 |
239 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344941554 rs1448536611 |
240 | D>E | No |
ClinGen gnomAD |
|
|
CA1462321 rs771045450 |
241 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs778114055 CA1462320 |
243 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA1462319 rs778114055 |
243 | N>T | No |
ClinGen ExAC gnomAD |
|
|
rs568128662 CA1462317 |
244 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA344941429 rs1469515256 |
245 | N>S | No |
ClinGen gnomAD |
|
|
rs1176810708 CA344941393 |
247 | Y>F | No |
ClinGen gnomAD |
|
|
CA1462315 rs754729957 |
249 | V>M | No |
ClinGen ExAC |
|
|
rs1326398402 CA344941320 |
250 | F>I | No |
ClinGen TOPMed |
|
| TCGA novel | 253 | E>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751506103 CA1462314 |
254 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs375092677 CA1462313 |
255 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs185627414 CA1462312 |
257 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs761532312 CA1462309 |
260 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA344940904 rs1350502136 |
261 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA1462308 rs753489817 |
262 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1353788213 CA344940610 |
264 | G>W | No |
ClinGen gnomAD |
|
|
CA344940567 rs1163449109 |
265 | A>V | No |
ClinGen TOPMed |
|
|
CA344940559 rs1231632833 |
266 | Q>* | No |
ClinGen gnomAD |
|
|
rs756784066 CA1462292 |
266 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462291 rs753543300 |
267 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 270 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1275247779 CA344940457 |
270 | G>V | No |
ClinGen gnomAD |
|
|
CA344940448 rs1429738201 |
271 | F>Y | No |
ClinGen gnomAD |
|
|
COSM1223363 CA1462290 rs746050670 |
272 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA1462289 rs367844001 |
272 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA344940397 rs1421660507 |
273 | I>F | No |
ClinGen gnomAD |
|
|
CA1462288 rs751865799 |
274 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA344940304 rs1440942695 |
275 | V>A | No |
ClinGen TOPMed |
|
|
rs376789873 CA1462287 |
277 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765307260 CA1462284 |
278 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765307260 CA39583127 |
278 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1475289696 CA344940152 |
279 | S>F | No |
ClinGen gnomAD |
|
|
CA344940171 rs1192179879 |
279 | S>P | No |
ClinGen gnomAD |
|
|
CA344940117 rs1360155554 |
281 | T>I | No |
ClinGen TOPMed |
|
|
rs778841894 CA1462275 |
285 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs913255595 CA39582127 |
286 | K>E | No |
ClinGen gnomAD |
|
|
CA39582118 rs990164414 |
287 | R>G | No |
ClinGen Ensembl |
|
|
CA1462272 rs755807240 |
288 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs755807240 CA1462271 |
288 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA344939334 rs1409545798 |
288 | S>T | No |
ClinGen gnomAD |
|
|
CA1462270 rs755807240 |
288 | S>W | No |
ClinGen ExAC gnomAD |
|
|
CA344939268 rs1572142981 |
291 | V>E | No |
ClinGen Ensembl |
|
|
rs766687455 CA1462268 |
291 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA344939243 rs1257411746 |
292 | G>E | No |
ClinGen gnomAD |
|
|
CA1462267 rs758723314 |
293 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1485602134 CA344939222 |
293 | N>S | No |
ClinGen gnomAD |
|
|
rs1237749515 CA344939211 |
294 | L>F | No |
ClinGen gnomAD |
|
|
CA344939017 rs747761908 |
300 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780840491 CA1462248 |
300 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs747761908 CA1462249 |
300 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1181699219 CA344939001 |
301 | S>P | No |
ClinGen TOPMed |
|
| TCGA novel | 302 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750798921 CA1462246 |
303 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758750404 CA1462247 |
303 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765777960 CA1462245 |
304 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs931270824 CA39581815 |
306 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs754290166 CA1462243 |
307 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1166501527 CA344938876 |
307 | F>S | No |
ClinGen TOPMed |
|
|
CA39581798 rs907387674 |
309 | D>G | No |
ClinGen Ensembl |
|
|
rs760738823 CA1462241 |
313 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs767765311 CA1462239 |
314 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs573981245 CA1462237 |
315 | A>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1462233 rs374992259 |
316 | V>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1462235 rs368049743 |
316 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1462234 rs368049743 |
316 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1558136776 CA344938718 |
317 | R>S | No |
ClinGen Ensembl |
|
| TCGA novel | 318 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1462230 rs780778276 |
320 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462231 rs747683049 |
320 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA344938667 rs1418348187 |
321 | D>A | No |
ClinGen gnomAD |
|
|
rs1418348187 CA344938666 |
321 | D>G | No |
ClinGen gnomAD |
|
|
rs1298112732 CA344938673 |
321 | D>N | No |
ClinGen gnomAD |
|
|
rs537362399 CA1462227 |
323 | M>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs537362399 CA1462228 |
323 | M>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1462226 rs779268292 |
325 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA344938581 rs1236167581 |
326 | I>N | No |
ClinGen gnomAD |
|
|
rs759685290 CA39581683 |
327 | G>R | No |
ClinGen TOPMed |
|
|
CA344938565 rs759685290 |
327 | G>S | No |
ClinGen TOPMed |
|
|
rs1443120953 CA344938560 |
328 | K>Q | No |
ClinGen gnomAD |
|
|
CA1462224 rs754345170 |
332 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754345170 CA344938466 |
332 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776909443 CA1462223 |
333 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs989161682 CA39581682 |
334 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1483678534 CA344936802 |
340 | S>T | No |
ClinGen gnomAD |
|
|
CA1462201 rs375776522 |
341 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA39578754 rs901895122 |
342 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs781364855 CA1462199 |
342 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462198 rs372566500 |
343 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1462197 rs751845741 |
343 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462196 rs370366001 |
345 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 345 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1338203275 CA344936442 |
348 | N>H | No |
ClinGen gnomAD |
|
|
CA1462195 rs758338651 |
348 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344936333 rs1329108068 |
350 | S>F | No |
ClinGen gnomAD |
|
|
CA344936350 rs1399028939 |
350 | S>T | No |
ClinGen gnomAD |
|
|
CA1462191 rs537801075 |
353 | M>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs912438626 CA39578740 |
353 | M>L | No |
ClinGen Ensembl |
|
|
rs537801075 CA344936250 |
353 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344936230 rs867063445 |
354 | G>A | No |
ClinGen TOPMed |
|
|
rs867063445 CA39578709 |
354 | G>E | No |
ClinGen TOPMed |
|
|
rs1401024210 CA344936238 |
354 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA344936060 rs1189651623 |
360 | M>V | No |
ClinGen gnomAD |
|
|
CA1462189 rs200568508 |
361 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs761837567 CA1462188 |
361 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs761837567 CA39578702 |
361 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1412767267 CA344935957 |
363 | V>A | No |
ClinGen TOPMed |
|
|
CA1462187 rs776388084 |
363 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs776388084 CA344935970 |
363 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1175470610 CA344935933 |
364 | N>S | No |
ClinGen TOPMed |
|
|
rs1459360912 CA344935921 |
365 | K>E | No |
ClinGen gnomAD |
|
|
CA344935791 COSM905792 rs1285468691 |
368 | F>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1318918350 CA344935742 |
370 | Q>H | No |
ClinGen TOPMed |
|
|
CA1462181 rs749691830 |
373 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462182 rs771706589 |
373 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA1462180 rs773603444 |
376 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462179 rs530408862 |
376 | R>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs530408862 CA1462178 |
376 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1462176 rs755167793 |
377 | L>W | No |
ClinGen ExAC gnomAD |
|
|
rs1042986588 CA39578638 |
378 | K>T | No |
ClinGen TOPMed |
|
|
CA344935604 rs1277345399 |
380 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA1462175 rs747083919 |
381 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA344935549 rs1572137490 |
382 | K>N | No |
ClinGen Ensembl |
|
|
CA344935533 rs1558134123 |
383 | P>L | No |
ClinGen Ensembl |
|
|
rs758675388 CA1462173 |
383 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA344935512 rs1441702004 |
384 | K>N | No |
ClinGen gnomAD |
|
| TCGA novel | 390 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1055441644 CA39578581 |
390 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs750628366 CA1462171 |
392 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA344935323 rs1233845743 |
392 | K>R | No |
ClinGen gnomAD |
|
|
CA1462170 rs765116198 |
393 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1292606787 CA344935309 |
394 | A>T | No |
ClinGen gnomAD |
|
|
CA344935162 rs1464329452 |
398 | P>H | No |
ClinGen TOPMed |
|
|
rs1209982649 CA344935142 |
399 | K>E | No |
ClinGen gnomAD |
|
|
rs1209982649 CA344935147 |
399 | K>Q | No |
ClinGen gnomAD |
|
|
rs756931559 CA1462169 |
399 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA1462168 rs753823792 |
400 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA344935075 rs1250073097 |
400 | S>R | No |
ClinGen TOPMed |
|
| rs773410897 | 402 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1241913002 CA344935034 |
402 | F>S | No |
ClinGen gnomAD |
|
|
rs1553272089 CA1462166 |
403 | I>V | No |
ClinGen Ensembl |
|
|
CA344934925 rs1433993664 |
407 | A>T | No |
ClinGen gnomAD |
|
|
CA39578528 rs999681534 |
407 | A>V | No |
ClinGen TOPMed |
|
|
CA1462165 rs763921760 |
409 | L>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 409 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA39578517 rs966838549 |
410 | L>R | No |
ClinGen TOPMed |
|
|
CA1462162 rs774948043 |
411 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1462160 COSM905790 rs188131274 |
412 | T>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs773809286 CA1462158 |
413 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs551130155 CA1462157 |
415 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA344934709 rs1172399127 |
416 | G>R | No |
ClinGen gnomAD |
|
|
CA39578453 rs774170386 |
418 | K>R | No |
ClinGen Ensembl |
|
|
rs940879740 CA39578446 |
419 | K>E | No |
ClinGen TOPMed |
|
|
CA344934549 rs1200796029 |
421 | G>R | No |
ClinGen gnomAD |
|
|
rs909374532 COSM176602 CA39578443 |
422 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs777263723 CA1462154 |
422 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs953630468 CA39578439 |
424 | K>E | No |
ClinGen TOPMed |
|
|
CA344934403 rs1572137187 |
426 | Q>H | No |
ClinGen Ensembl |
|
|
rs769257062 CA39578438 |
427 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs769257062 CA1462153 |
427 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA1462152 rs183788622 |
428 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
No associated diseases with P42696
3 regional properties for P42696
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | RNA recognition motif domain | 185 - 280 | IPR000504-1 |
| domain | RNA recognition motif domain | 287 - 364 | IPR000504-2 |
| domain | RBM34, RNA recognition motif 2 | 288 - 360 | IPR034221 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| chromosome | A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| RNA binding | Binding to an RNA molecule or a portion thereof. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
8 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8N9W6 | BOLL | Protein boule-like | Homo sapiens (Human) | PR |
| Q05CL8 | Larp7 | La-related protein 7 | Mus musculus (Mouse) | PR |
| Q924M5 | Boll | Protein boule-like | Mus musculus (Mouse) | PR |
| Q8C854 | Myef2 | Myelin expression factor 2 | Mus musculus (Mouse) | PR |
| Q5XI01 | Larp7 | La-related protein 7 | Rattus norvegicus (Rat) | PR |
| Q9S7N9 | CID12 | Polyadenylate-binding protein-interacting protein 12 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q93ZV7 | LA1 | La protein 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q4KM14 | trnau1apl | tRNA selenocysteine 1-associated protein 1-like | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MALEGMSKRK | RKRSVQEGEN | PDDGVRGSPP | EDYRLGQVAS | SLFRGEHHSR | GGTGRLASLF |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SSLEPQIQPV | YVPVPKQTIK | KTKRNEEEES | TSQIERPLSQ | EPAKKVKAKK | KHTNAEKKLA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DRESALASAD | LEEEIHQKQG | QKRKNSQPGV | KVADRKILDD | TEDTVVSQRK | KIQINQEEER |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LKNERTVFVG | NLPVTCNKKK | LKSFFKEYGQ | IESVRFRSLI | PAEGTLSKKL | AAIKRKIHPD |
| 250 | 260 | 270 | 280 | 290 | 300 |
| QKNINAYVVF | KEESAATQAL | KRNGAQIADG | FRIRVDLASE | TSSRDKRSVF | VGNLPYKVEE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SAIEKHFLDC | GSIMAVRIVR | DKMTGIGKGF | GYVLFENTDS | VHLALKLNNS | ELMGRKLRVM |
| 370 | 380 | 390 | 400 | 410 | 420 |
| RSVNKEKFKQ | QNSNPRLKNV | SKPKQGLNFT | SKTAEGHPKS | LFIGEKAVLL | KTKKKGQKKS |
| GRPKKQRKQK |