Q9BYE7
Gene name |
PCGF6 (MBLR, RNF134) |
Protein name |
Polycomb group RING finger protein 6 |
Names |
Mel18 and Bmi1-like RING finger, RING finger protein 134 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:84108 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for Q9BYE7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2DJB | NMR | - | A | 124-182 | PDB |
| AF-Q9BYE7-F1 | Predicted | AlphaFoldDB |
295 variants for Q9BYE7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA5671951 CA212339336 rs767902294 |
3 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5671950 rs201686526 |
3 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA377968779 rs767902294 |
3 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs904324152 CA212339334 |
5 | A>P | No |
ClinGen Ensembl |
|
|
CA5671949 rs774046455 |
5 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA212339333 rs1044647901 |
6 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA377968761 rs1304114830 |
7 | V>L | No |
ClinGen gnomAD |
|
|
rs1592082353 CA377968754 |
8 | T>A | No |
ClinGen Ensembl |
|
|
CA5671948 rs768431972 |
8 | T>K | No |
ClinGen ExAC gnomAD |
|
|
rs1012815791 CA212339318 |
9 | A>V | No |
ClinGen Ensembl |
|
|
rs1378524242 CA377968742 |
10 | G>A | No |
ClinGen TOPMed |
|
|
rs775558277 CA5671946 |
10 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA377968739 rs1421164322 |
11 | S>G | No |
ClinGen gnomAD |
|
|
CA377968733 rs1380490151 |
11 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1411009380 CA377968728 |
12 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA377968723 rs1187039179 |
13 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1392457221 CA377968725 |
13 | G>R | No |
ClinGen gnomAD |
|
|
CA5671945 rs769721696 |
14 | A>G | No |
ClinGen ExAC TOPMed |
|
|
rs745428639 CA5671944 |
15 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs571651624 CA5671943 |
17 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5671942 rs770598636 |
18 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs755427741 CA5671941 |
20 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755427741 CA5671940 |
20 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755427741 CA5671939 |
20 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA377968681 rs749610887 |
21 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749610887 CA5671938 |
21 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1592082290 CA377968678 |
21 | A>V | No |
ClinGen Ensembl |
|
|
CA5671936 rs756669304 |
22 | A>G | No |
ClinGen ExAC gnomAD |
|
| VAR_054312 | 23 | L>LPP | No | UniProt | |
|
CA377968671 rs1227349819 |
23 | L>M | No |
ClinGen gnomAD |
|
|
rs767666414 CA5671934 |
23 | L>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA377968664 rs1405527062 |
24 | P>A | No |
ClinGen TOPMed |
|
|
CA377968660 rs1564737810 |
24 | P>L | No |
ClinGen Ensembl |
|
|
CA377968650 rs1592082260 |
26 | P>L | No |
ClinGen Ensembl |
|
|
CA5671931 rs751750682 |
27 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5671932 rs757557974 |
27 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs60968810 RCV000947281 |
27 | P>missing | No |
ClinVar dbSNP |
|
|
rs200858964 CA212339215 |
29 | V>A | No |
ClinGen Ensembl |
|
|
CA5671923 rs547044665 |
31 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1287063734 CA377968609 |
33 | A>V | No |
ClinGen gnomAD |
|
|
rs910034457 CA212339189 |
35 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
rs910034457 CA377968599 |
35 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs528515143 CA5671922 |
36 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA377968593 rs1351323818 |
36 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1351323818 CA377968594 |
36 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA212339178 rs763154366 |
37 | A>V | No |
ClinGen Ensembl |
|
|
rs923896712 CA212339147 |
38 | P>L | No |
ClinGen TOPMed |
|
|
rs776119730 CA5671920 |
38 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 39 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA377968574 rs746488571 |
40 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA377968577 rs1259438928 |
40 | A>T | No |
ClinGen TOPMed |
|
|
rs746488571 CA5671918 |
40 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1300603361 CA377968566 |
42 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA377968555 rs1401351476 |
43 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
rs772983688 CA5671917 |
44 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA377968542 rs1242206426 |
45 | P>L | No |
ClinGen gnomAD |
|
|
rs1307108294 CA377968538 |
46 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA377968534 rs1592082146 |
46 | A>V | No |
ClinGen Ensembl |
|
| TCGA novel | 47 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA377968529 rs1306654715 |
47 | P>L | No |
ClinGen gnomAD |
|
|
rs749709522 CA5671915 |
47 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA377968526 rs1468190062 |
48 | L>Q | No |
ClinGen TOPMed |
|
|
rs1172836688 CA377968519 |
49 | S>C | No |
ClinGen TOPMed |
|
|
rs1295629376 CA377968517 |
50 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1465232361 CA377968510 |
50 | E>D | No |
ClinGen TOPMed |
|
|
CA212339096 rs986072436 |
51 | T>M | No |
ClinGen gnomAD |
|
|
rs1160014094 CA377968493 |
53 | A>V | No |
ClinGen gnomAD |
|
|
CA377968477 rs1473582138 |
56 | C>Y | No |
ClinGen gnomAD |
|
|
rs1409836749 CA377968468 |
57 | S>C | No |
ClinGen gnomAD |
|
| TCGA novel | 57 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA377968466 rs1592082103 |
58 | G>S | No |
ClinGen Ensembl |
|
|
CA377968454 rs1554866872 |
59 | S>F | No |
ClinGen Ensembl |
|
|
CA5671908 rs764418443 |
59 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs879696874 CA212339063 |
60 | R>P | No |
ClinGen Ensembl |
|
|
rs758497413 CA5671907 |
60 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs911411093 CA212339058 |
61 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs986017043 CA212339035 |
62 | P>R | No |
ClinGen TOPMed |
|
|
rs752565427 CA5671906 |
63 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA377968420 rs1317981660 |
63 | E>Q | No |
ClinGen TOPMed |
|
|
CA377968402 rs1197510905 |
64 | L>Q | No |
ClinGen TOPMed |
|
|
rs764940684 CA5671905 |
64 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1228375680 CA377968384 |
65 | E>D | No |
ClinGen gnomAD |
|
|
rs1303903766 CA377968372 |
66 | P>L | No |
ClinGen gnomAD |
|
|
rs759478488 CA5671904 |
66 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1564737641 CA377968363 |
67 | E>G | No |
ClinGen Ensembl |
|
|
rs776607617 CA5671903 |
67 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA377968352 rs1390313498 |
68 | R>C | No |
ClinGen gnomAD |
|
|
CA5671902 rs766298294 |
68 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs1256116821 CA377968343 |
69 | S>C | No |
ClinGen gnomAD |
|
|
rs747461274 CA377968338 |
69 | S>I | No |
ClinGen gnomAD |
|
|
rs747461274 CA212339011 |
69 | S>T | No |
ClinGen gnomAD |
|
|
rs1245925931 CA377968321 |
71 | G>C | No |
ClinGen TOPMed |
|
|
CA5671901 rs760271743 |
72 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA5671900 rs561330452 |
76 | R>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA377968256 rs1195752644 |
76 | R>L | No |
ClinGen TOPMed |
|
|
CA377968235 rs1166258258 |
78 | E>Q | No |
ClinGen TOPMed |
|
|
rs1196487531 CA377968206 |
80 | E>K | No |
ClinGen gnomAD |
|
|
rs1432325070 CA377968177 |
81 | D>E | No |
ClinGen gnomAD |
|
|
CA377968187 rs1393082903 |
81 | D>Y | No |
ClinGen TOPMed |
|
|
CA377968161 rs922824435 |
82 | E>D | No |
ClinGen TOPMed |
|
|
CA377968175 rs1406182818 |
82 | E>K | No |
ClinGen TOPMed |
|
|
rs1364095376 CA377968152 |
83 | E>G | No |
ClinGen TOPMed |
|
|
rs1248393150 CA377968155 |
83 | E>Q | No |
ClinGen gnomAD |
|
|
CA377968103 rs1592082008 |
86 | E>D | No |
ClinGen Ensembl |
|
|
rs761333383 CA5671896 |
86 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 87 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs369763488 CA5671895 |
87 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 89 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA377968051 rs1564737576 |
90 | L>V | No |
ClinGen Ensembl |
|
|
rs1357955759 CA377968015 |
92 | E>V | No |
ClinGen TOPMed |
|
|
CA377967996 rs1245198360 |
93 | E>D | No |
ClinGen gnomAD |
|
|
CA377968006 rs1231696707 |
93 | E>K | No |
ClinGen gnomAD |
|
|
rs1298752729 CA377967992 |
94 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1363224850 CA377967955 |
96 | E>* | No |
ClinGen gnomAD |
|
|
rs1363224850 CA377967958 |
96 | E>K | No |
ClinGen gnomAD |
|
|
CA377967929 rs1220378093 |
98 | E>K | No |
ClinGen gnomAD |
|
|
CA377967885 rs1487932948 |
100 | D>E | No |
ClinGen TOPMed |
|
|
rs147906472 CA5671886 |
101 | M>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1370270840 CA377967877 |
101 | M>T | No |
ClinGen TOPMed |
|
|
CA5671885 rs771314642 |
102 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs771314642 CA377967868 |
102 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA377967799 rs1190217792 |
106 | L>W | No |
ClinGen gnomAD |
|
|
CA377967768 rs1383668080 |
109 | E>K | No |
ClinGen TOPMed |
|
|
rs1012484780 CA212338893 |
110 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA5671883 rs747164839 |
111 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1564737483 CA377967733 |
111 | G>V | No |
ClinGen Ensembl |
|
|
CA5671882 rs777672917 |
112 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA377967717 rs1340304645 |
113 | Q>* | No |
ClinGen gnomAD |
|
|
rs758647632 CA5671881 |
113 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1392380317 CA377967713 |
113 | Q>L | No |
ClinGen gnomAD |
|
|
CA377967706 rs1449014142 |
114 | D>Y | No |
ClinGen gnomAD |
|
|
rs139160000 CA5671880 |
115 | S>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs149919157 CA212338844 |
115 | S>A | No |
ClinGen ESP |
|
|
rs139160000 CA212338828 |
115 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA377967670 rs1395408988 |
117 | D>N | No |
ClinGen gnomAD |
|
|
rs779090040 CA5671879 |
118 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs754834358 CA5671878 |
118 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA5671877 rs753599183 |
118 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA212338812 rs779090040 |
118 | E>K | No |
ClinGen ExAC gnomAD |
|
|
COSM914318 rs199872878 COSM914319 CA5671859 |
121 | R>C | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA5671858 rs370275744 |
121 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA377967174 rs1213287098 |
122 | L>P | No |
ClinGen gnomAD |
|
|
rs750269866 CA5671856 |
123 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773998619 CA212337627 |
125 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773998619 CA5671855 |
125 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761300554 CA5671854 |
127 | E>G | No |
ClinGen ExAC |
|
|
CA377967102 rs1275249360 |
129 | T>I | No |
ClinGen gnomAD |
|
|
CA5671852 rs752613513 |
130 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA5671851 rs763890537 |
132 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA377967038 rs1322542794 |
135 | S>C | No |
ClinGen gnomAD |
|
|
CA377967036 rs1322542794 |
135 | S>F | No |
ClinGen gnomAD |
|
|
rs767484912 CA212337569 |
138 | K>R | No |
ClinGen Ensembl |
|
|
rs371197801 CA5671849 |
139 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA212337558 rs914903407 |
142 | I>M | No |
ClinGen TOPMed |
|
|
rs761083408 CA5671848 |
144 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1471915280 CA377966938 |
144 | A>T | No |
ClinGen gnomAD |
|
|
CA5671847 rs761083408 |
144 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA377966930 rs1192155840 |
145 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1479242850 CA377966924 |
145 | T>S | No |
ClinGen gnomAD |
|
|
CA212337546 rs990570259 |
147 | I>V | No |
ClinGen Ensembl |
|
|
CA212337544 rs959131615 |
150 | C>Y | No |
ClinGen Ensembl |
|
|
rs772600171 CA5671845 |
151 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1034511347 CA212337542 |
152 | H>Y | No |
ClinGen Ensembl |
|
|
rs1316303167 CA377966843 |
153 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA5671844 rs748276554 |
153 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1401613808 CA377966808 |
156 | K>R | No |
ClinGen gnomAD |
|
|
CA377966800 rs1170556288 |
157 | S>N | No |
ClinGen gnomAD |
|
|
rs201230559 CA5671832 |
159 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1310345075 COSM3382654 CA377966780 COSM3382655 |
160 | V>I | pancreas [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs760985653 CA5671830 |
162 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA377966759 rs1592080184 |
163 | F>V | No |
ClinGen Ensembl |
|
| TCGA novel | 164 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5671828 rs767929883 |
165 | Y>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5671827 rs139995358 |
166 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
|
CA5671826 rs145936308 |
166 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1227101285 CA377966706 |
167 | N>S | No |
ClinGen TOPMed |
|
|
rs1003312693 CA212337403 |
168 | R>K | No |
ClinGen TOPMed |
|
|
rs1450849548 CA377966669 |
171 | K>Q | No |
ClinGen gnomAD |
|
|
CA377966622 rs1173407052 |
174 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs200230704 CA5671821 |
185 | I>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs200230704 CA5671822 COSM2154707 COSM2154706 |
185 | I>V | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1166728009 CA377966246 |
188 | D>V | No |
ClinGen TOPMed |
|
|
CA5671797 rs747633467 COSM1675527 |
189 | R>* | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA377966241 rs1416733158 |
189 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs778444995 CA5671796 |
190 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA377966234 rs1232097038 |
190 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs754589710 CA5671795 |
194 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs200564910 CA212336430 |
194 | I>V | No |
ClinGen gnomAD |
|
|
CA5671794 rs753473267 |
195 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA377966163 rs1393899480 |
201 | N>H | No |
ClinGen gnomAD |
|
|
rs375269864 CA5671791 |
202 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 203 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA377966147 rs1458785381 |
203 | E>G | No |
ClinGen gnomAD |
|
|
CA377966142 rs1361929706 |
204 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1379200610 CA377966112 |
206 | E>G | No |
ClinGen gnomAD |
|
|
rs142360344 CA5671778 |
207 | K>R | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 208 | K>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA377966087 rs1189956579 |
209 | Q>H | No |
ClinGen gnomAD |
|
|
rs1191634987 CA377966084 |
210 | M>V | No |
ClinGen TOPMed |
|
| TCGA novel | 211 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778299421 CA5671777 |
214 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA377966045 rs1260396663 |
215 | K>* | No |
ClinGen gnomAD |
|
| rs1205112145 | 217 | R>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs748743394 CA377966003 |
221 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA377966002 rs748743394 CA5671775 |
221 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA212336273 rs766035234 |
222 | P>R | No |
ClinGen Ensembl |
|
|
CA377965998 rs1232468909 |
222 | P>S | No |
ClinGen gnomAD |
|
|
CA377965956 rs1337637382 |
225 | A>V | No |
ClinGen gnomAD |
|
|
rs774413592 CA5671760 |
226 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA377965943 rs1245526172 |
227 | P>S | No |
ClinGen gnomAD |
|
|
rs768449004 CA5671759 |
228 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA377965925 rs1311053951 |
228 | Q>H | No |
ClinGen gnomAD |
|
|
CA5671758 rs748879383 |
229 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA377965917 rs1370990713 |
229 | P>R | No |
ClinGen gnomAD |
|
|
CA212334756 rs961290098 |
231 | P>T | No |
ClinGen Ensembl |
|
|
CA5671757 rs376321728 |
233 | S>C | No |
ClinGen ESP ExAC gnomAD |
|
|
CA377965878 rs1254819398 |
233 | S>N | No |
ClinGen TOPMed |
|
|
rs1407888490 CA377965848 |
236 | R>G | No |
ClinGen gnomAD |
|
|
rs769470053 CA5671756 |
236 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372664700 CA5671755 |
237 | S>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1376061462 CA377965814 |
239 | K>E | No |
ClinGen TOPMed |
|
|
rs1473524515 CA377965812 |
239 | K>R | No |
ClinGen gnomAD |
|
| rs35956583 | 240 | V>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA212334734 rs962689338 |
242 | E>Q | No |
ClinGen Ensembl |
|
|
rs758860265 CA5671753 |
244 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1475156309 CA377965698 |
246 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs137910892 CA5671752 |
246 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA377965691 rs137910892 |
246 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA377965677 rs1207018309 |
247 | I>T | No |
ClinGen gnomAD |
|
|
rs149394518 CA5671750 |
249 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369977135 CA5671748 |
250 | E>K | No |
ClinGen ESP ExAC gnomAD |
|
|
rs756417949 CA5671747 |
251 | L>F | No |
ClinGen ExAC TOPMed |
|
|
CA377965597 rs756417949 |
251 | L>V | No |
ClinGen ExAC TOPMed |
|
|
CA5671746 rs372984226 |
252 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1386769504 CA377965581 |
252 | D>G | No |
ClinGen TOPMed |
|
|
rs1229099067 CA377965558 |
253 | M>T | No |
ClinGen TOPMed |
|
|
CA5671745 rs767629086 |
253 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138884621 CA5671744 |
260 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs764115744 CA5671742 |
260 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5671743 rs773997289 |
260 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1564731376 CA377963265 |
262 | A>T | No |
ClinGen Ensembl |
|
|
CA5671724 rs781528375 |
266 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs867176150 CA212329582 |
266 | T>P | No |
ClinGen Ensembl |
|
|
rs751404603 CA5671722 |
268 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781093373 CA5671700 |
271 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751677395 CA5671698 |
273 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1173287428 CA377989278 |
274 | K>E | No |
ClinGen gnomAD |
|
|
CA5671697 rs778046845 COSM683492 COSM683493 |
274 | K>N | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA377989256 rs1392642412 |
277 | V>I | No |
ClinGen TOPMed |
|
|
CA5671696 rs758260563 |
278 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA377989250 rs758260563 |
278 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752463812 CA377989248 |
278 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs752463812 CA5671695 |
278 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs545021529 CA5671693 |
283 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1358881533 CA377989195 |
287 | H>R | No |
ClinGen gnomAD |
|
|
rs761497338 CA212372800 |
287 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA377989180 rs1389278956 |
289 | E>G | No |
ClinGen TOPMed |
|
|
CA377989184 rs1592064615 |
289 | E>K | No |
ClinGen Ensembl |
|
|
rs765746959 CA5671691 |
291 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA377989145 rs1308852871 |
294 | R>T | No |
ClinGen gnomAD |
|
|
rs760218812 CA5671690 |
296 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs1051280272 CA212372787 |
297 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1051280272 CA212372786 |
297 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA377989102 rs1294507348 |
300 | P>L | No |
ClinGen gnomAD |
|
|
rs1379243938 CA377989105 |
300 | P>T | No |
ClinGen gnomAD |
|
|
rs1052389185 CA212372780 |
303 | Q>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1052389185 CA377989084 |
303 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
CA377989083 rs1052389185 |
303 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1176313227 CA377988205 |
306 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
CA377988203 rs1488573421 |
306 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA377988206 rs1176313227 |
306 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs971721778 CA212364006 |
311 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs766334588 CA5671669 |
316 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1406127952 CA377988129 |
317 | Q>K | No |
ClinGen TOPMed |
|
|
rs1164349196 CA377988114 |
319 | L>V | No |
ClinGen TOPMed |
|
| TCGA novel | 320 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA377988093 rs1333356971 |
322 | I>F | No |
ClinGen gnomAD |
|
|
rs1333356971 CA377988094 |
322 | I>V | No |
ClinGen gnomAD |
|
|
rs1348440593 CA377988087 |
323 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs755618927 CA5671668 |
323 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs374125579 CA5671667 |
324 | R>H | No |
ClinGen ESP ExAC gnomAD |
|
|
CA5671666 rs767300911 |
325 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs761519604 CA5671665 |
326 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA377988051 rs1371913248 |
329 | A>G | No |
ClinGen gnomAD |
|
|
rs776004397 CA5671664 |
329 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA377988023 rs1592056885 |
331 | M>I | No |
ClinGen Ensembl |
|
|
CA5671663 rs765641622 |
331 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1438872213 CA377988015 |
332 | Q>R | No |
ClinGen gnomAD |
|
|
rs772195361 CA5671640 |
339 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1194647592 CA377985369 |
339 | H>Y | No |
ClinGen gnomAD |
|
|
CA5671638 rs191466012 |
341 | G>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5671637 rs768900276 |
344 | V>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 345 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA377985275 rs1282882154 |
346 | P>S | No |
ClinGen gnomAD |
|
|
CA212357111 rs1046809885 |
349 | I>V | No |
ClinGen TOPMed gnomAD |
No associated diseases with Q9BYE7
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| PcG protein complex | A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure. |
| PRC1 complex | A multiprotein complex that mediates monoubiquitination of lysine residues of histone H2A (lysine-118 in Drosophila or lysine-119 in mammals). The complex is required for stable long-term maintenance of transcriptionally repressed states and is involved in chromatin remodeling. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| metal ion binding | Binding to a metal ion. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| histone H2A-K119 monoubiquitination | The modification of histone H2A by addition of a single ubiquitin group to lysine-119 (H2A- K119) in metazoans, and at the equivalent residue in other organisms. |
| negative regulation of DNA-templated transcription | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
| negative regulation of transcription by RNA polymerase II | Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II. |
| regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
9 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| A0JN86 | PCGF5 | Polycomb group RING finger protein 5 | Bos taurus (Bovine) | PR |
| Q2KJ29 | PCGF3 | Polycomb group RING finger protein 3 | Bos taurus (Bovine) | PR |
| Q3KNV8 | PCGF3 | Polycomb group RING finger protein 3 | Homo sapiens (Human) | PR |
| Q86SE9 | PCGF5 | Polycomb group RING finger protein 5 | Homo sapiens (Human) | PR |
| Q8BTQ0 | PcgF3 | Polycomb group RING finger protein 3 | Mus musculus (Mouse) | PR |
| Q3UK78 | Pcgf5 | Polycomb group RING finger protein 5 | Mus musculus (Mouse) | PR |
| Q07G17 | pcgf3 | Polycomb group RING finger protein 3 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| Q1JPS1 | pcgf5b | Polycomb group RING finger protein 5-B | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| B3DK16 | pcgf5a | Polycomb group RING finger protein 5-A | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEGVAVVTAG | SVGAAKTEGA | AALPPPPPVS | PPALTPAPAA | GEEGPAPLSE | TGAPGCSGSR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PPELEPERSL | GRFRGRFEDE | DEELEEEEEL | EEEEEEEEED | MSHFSLRLEG | GRQDSEDEEE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| RLINLSELTP | YILCSICKGY | LIDATTITEC | LHTFCKSCIV | RHFYYSNRCP | KCNIVVHQTQ |
| 190 | 200 | 210 | 220 | 230 | 240 |
| PLYNIRLDRQ | LQDIVYKLVI | NLEEREKKQM | HDFYKERGLE | VPKPAVPQPV | PSSKGRSKKV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LESVFRIPPE | LDMSLLLEFI | GANEGTGHFK | PLEKKFVRVS | GEATIGHVEK | FLRRKMGLDP |
| 310 | 320 | 330 | 340 | ||
| ACQVDIICGD | HLLEQYQTLR | EIRRAIGDAA | MQDGLLVLHY | GLVVSPLKIT |