Q969R2
Gene name |
OSBP2 (KIAA1664, ORP4, OSBPL4) |
Protein name |
Oxysterol-binding protein 2 |
Names |
Oxysterol-binding protein-related protein 4, ORP-4, OSBP-related protein 4 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:23762 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q969R2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q969R2-F1 | Predicted | AlphaFoldDB |
750 variants for Q969R2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA411535619 rs1602132275 |
4 | A>G | No |
ClinGen Ensembl |
|
|
CA10185550 rs752295297 |
4 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185551 rs757581742 |
6 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs767794548 CA10185552 |
7 | P>L | No |
ClinGen ExAC |
|
|
rs756583162 CA411535646 |
8 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780587453 CA10185556 |
9 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA323611454 rs755081301 |
9 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185557 rs755081301 |
9 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185558 rs779127892 |
11 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1416293259 CA411535679 |
12 | G>V | No |
ClinGen gnomAD |
|
|
rs1354382057 CA411535706 |
15 | G>C | No |
ClinGen gnomAD |
|
|
CA411535713 rs1372221910 |
16 | R>G | No |
ClinGen TOPMed |
|
|
rs1308802853 CA411535734 |
18 | R>C | No |
ClinGen gnomAD |
|
|
CA411535741 rs1380678824 |
19 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1238239652 CA411535769 |
21 | S>W | No |
ClinGen gnomAD |
|
|
rs980055036 CA323611456 |
28 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA411535838 rs1179336966 |
28 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 28 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411535830 rs980055036 |
28 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA411535895 rs1276884311 |
33 | H>Y | No |
ClinGen TOPMed |
|
|
CA411535910 rs1406159145 |
34 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1177392318 CA411535921 |
35 | A>V | No |
ClinGen gnomAD |
|
|
rs1436074330 CA411535936 |
37 | P>S | No |
ClinGen gnomAD |
|
|
CA411535950 rs1021784653 |
38 | G>D | No |
ClinGen gnomAD |
|
|
CA323611458 rs1021784653 |
38 | G>V | No |
ClinGen gnomAD |
|
|
rs889988705 CA323611459 |
41 | A>S | No |
ClinGen gnomAD |
|
|
CA10185565 rs776774093 |
42 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1007121146 CA323611460 |
42 | S>P | No |
ClinGen Ensembl |
|
|
rs759016782 CA10185566 |
46 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA10185567 rs764666088 |
47 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185568 rs764666088 |
47 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762545204 CA10185569 |
48 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA411536076 rs1410993640 |
49 | E>A | No |
ClinGen TOPMed |
|
|
rs1309321180 CA411536137 |
52 | P>L | No |
ClinGen TOPMed |
|
|
CA10185572 rs750765728 |
52 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs756529783 CA10185573 |
53 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA411536175 rs1407781011 |
54 | P>L | No |
ClinGen TOPMed |
|
|
CA411536204 rs1480491592 |
56 | P>L | No |
ClinGen gnomAD |
|
|
CA411536223 rs1486015284 |
57 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1172843457 CA411536211 |
57 | V>M | No |
ClinGen TOPMed |
|
|
rs1453055693 CA411536238 |
58 | P>L | No |
ClinGen gnomAD |
|
|
rs755031077 CA411536278 |
60 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755031077 CA10185576 |
60 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411536269 rs1191210779 |
60 | P>S | No |
ClinGen gnomAD |
|
|
rs950477094 CA323611463 |
61 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA10185580 rs778196099 |
62 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs554020856 CA10185579 |
62 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs770851785 CA10185582 |
63 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781215637 CA10185583 |
63 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs1056888792 CA323611465 |
64 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA411536345 rs745812869 |
64 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA10185584 rs745812869 |
64 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA10185585 rs769307041 |
66 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA411536383 rs1602132722 |
67 | E>K | No |
ClinGen Ensembl |
|
|
CA411536407 rs1307083633 |
68 | Q>* | No |
ClinGen gnomAD |
|
|
CA411536420 rs1194930447 |
69 | V>M | No |
ClinGen gnomAD |
|
|
CA411536434 rs1321793685 |
70 | S>P | No |
ClinGen TOPMed |
|
|
rs1193541011 CA411536464 |
73 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
CA10185588 rs762573249 |
77 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1427500572 CA411536519 |
78 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs201695346 CA323611468 |
78 | P>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA411536530 rs1165389140 |
79 | R>S | No |
ClinGen gnomAD |
|
|
CA10185590 rs13053290 |
81 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1325100880 CA411536557 |
82 | P>S | No |
ClinGen gnomAD |
|
|
rs760964281 CA10185591 |
83 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1334694251 CA411536581 |
84 | S>F | No |
ClinGen TOPMed |
|
|
rs375188093 CA10185592 |
85 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10185595 rs765817634 |
87 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs759996904 CA10185594 |
87 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA411536632 rs1295560511 |
89 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1295560511 CA411536633 |
89 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
CA10185596 rs200580022 |
90 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1269355684 CA411536671 |
92 | P>Q | No |
ClinGen gnomAD |
|
|
CA411536689 rs1449190612 |
94 | A>S | No |
ClinGen gnomAD |
|
|
rs1217334257 CA411536707 |
96 | Q>* | No |
ClinGen gnomAD |
|
|
CA323611470 rs928577184 |
97 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs891815610 CA323611472 |
102 | Q>R | No |
ClinGen Ensembl |
|
|
CA10185599 rs751841513 |
103 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1602132924 CA411536793 |
104 | S>A | No |
ClinGen Ensembl |
|
|
rs1419807447 CA411536817 |
106 | P>S | No |
ClinGen gnomAD |
|
|
rs961401943 CA323611473 |
107 | G>W | No |
ClinGen TOPMed |
|
|
CA411536834 rs1602132938 |
108 | S>A | No |
ClinGen Ensembl |
|
|
CA411536858 rs1209735239 |
110 | S>P | No |
ClinGen TOPMed |
|
|
rs562829562 CA10185600 |
111 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA10185601 rs781162624 |
112 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA323611475 rs1043177990 |
112 | S>P | No |
ClinGen Ensembl |
|
|
CA323611476 rs1027371508 |
113 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs576508023 CA10185604 |
115 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA411536935 rs1415677542 |
118 | P>R | No |
ClinGen gnomAD |
|
|
CA10185606 rs143270711 |
121 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1335725852 CA411536970 |
121 | K>N | No |
ClinGen TOPMed |
|
|
rs1366619516 CA411536980 |
122 | A>V | No |
ClinGen gnomAD |
|
|
rs761479332 CA10185610 |
123 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA10185609 rs201478395 |
123 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs761479332 CA411536989 |
123 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA411536999 rs1210926528 |
124 | S>L | No |
ClinGen gnomAD |
|
|
rs776834377 CA10185612 |
124 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs371148157 CA411537011 |
125 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs866985772 CA323611477 |
126 | P>S | No |
ClinGen Ensembl |
|
|
rs202038852 CA10185615 |
127 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1233238072 CA411537026 |
127 | L>V | No |
ClinGen gnomAD |
|
|
rs763066418 CA10185617 |
129 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411537046 rs1407400052 |
129 | R>W | No |
ClinGen gnomAD |
|
|
CA411537064 rs1602133117 |
131 | V>G | No |
ClinGen Ensembl |
|
|
rs764288874 CA10185618 |
132 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1216054324 CA411537069 |
132 | G>R | No |
ClinGen gnomAD |
|
|
CA10185619 rs751790190 |
133 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1330057500 CA411537093 |
134 | A>E | No |
ClinGen gnomAD |
|
|
CA10185620 rs757521218 |
134 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411537096 rs1330057500 |
134 | A>V | No |
ClinGen gnomAD |
|
|
CA10185621 rs373401186 |
135 | T>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411537103 rs373401186 |
135 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000971345 rs79856312 CA10185623 |
137 | L>F | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1349166064 CA411537135 |
138 | R>I | No |
ClinGen gnomAD |
|
|
CA411537147 rs1246511650 |
139 | P>R | No |
ClinGen gnomAD |
|
| TCGA novel | 140 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1189105069 CA411537160 |
140 | E>Q | No |
ClinGen gnomAD |
|
|
CA10185626 rs200118898 |
143 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs984481425 CA323611479 |
144 | L>P | No |
ClinGen Ensembl |
|
|
CA411537207 rs1454439013 |
145 | P>S | No |
ClinGen gnomAD |
|
|
CA10185627 rs778429697 |
149 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs747699976 CA10185628 |
150 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185629 rs150763805 |
151 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10185630 rs772979731 |
152 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA411537252 rs1232258134 |
152 | L>P | No |
ClinGen gnomAD |
|
|
CA411537257 rs1454616464 |
153 | L>R | No |
ClinGen gnomAD |
|
|
CA10185631 rs746148164 |
154 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746148164 CA411537261 |
154 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411537274 rs1363739080 |
156 | G>V | No |
ClinGen TOPMed |
|
|
rs1393346687 CA411537279 |
157 | Q>L | No |
ClinGen TOPMed gnomAD |
|
|
CA411537280 rs1393346687 |
157 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
CA323611480 rs969830348 |
158 | A>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 158 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411537287 rs969830348 |
158 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1168690535 CA411537292 |
159 | K>R | No |
ClinGen gnomAD |
|
|
CA411537303 rs1318838488 |
161 | P>S | No |
ClinGen gnomAD |
|
|
CA411537308 rs1350383245 |
162 | L>I | No |
ClinGen TOPMed |
|
|
CA10185632 rs770205328 |
162 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1350383245 CA411537309 |
162 | L>V | No |
ClinGen TOPMed |
|
|
CA10185634 rs763583406 |
163 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA323611482 rs944293663 |
165 | P>T | No |
ClinGen TOPMed |
|
|
CA10185635 rs201965909 |
166 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774548986 CA10185636 |
167 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs769957599 CA323611483 |
170 | G>C | No |
ClinGen Ensembl |
|
|
CA10185639 rs750663925 |
173 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs979897130 CA323611484 |
175 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs755808897 CA10185640 |
175 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA411537391 rs1468914327 |
176 | P>Q | No |
ClinGen gnomAD |
|
|
rs754881486 CA10185643 |
177 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA411537401 rs201100084 |
178 | A>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10185644 rs201100084 |
178 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1375014357 CA411537408 |
179 | L>F | No |
ClinGen gnomAD |
|
|
CA411537410 rs1372084499 |
180 | L>M | No |
ClinGen gnomAD |
|
|
CA411537433 rs1205343226 |
183 | D>E | No |
ClinGen TOPMed |
|
|
rs757904808 CA10185646 |
185 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs959966548 CA323611487 |
186 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs888431237 CA411537459 |
187 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs888431237 CA323611488 |
187 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs989164087 CA411537468 |
188 | W>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA323611489 rs989164087 |
188 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
rs777229880 CA10185647 |
190 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411537483 rs1295605508 |
191 | K>T | No |
ClinGen gnomAD |
|
|
rs770012050 CA10185649 |
192 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA411537490 rs1602133475 |
192 | W>G | No |
ClinGen Ensembl |
|
|
CA323611490 rs913205278 |
193 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA10185650 rs375879888 |
194 | N>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA411537505 rs1364968575 |
194 | N>S | No |
ClinGen TOPMed |
|
|
CA411537512 rs1308712928 |
195 | Y>C | No |
ClinGen TOPMed |
|
|
rs1235106476 CA411537531 |
198 | G>S | No |
ClinGen gnomAD |
|
|
rs749718645 CA10185651 |
198 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs769273064 CA10185652 |
200 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs368259138 CA10185653 |
201 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761918437 CA10185654 |
202 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs767650694 CA10185655 |
202 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs760991362 CA10185657 |
203 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs766552778 CA10185658 |
204 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs190861655 CA323611491 |
204 | F>L | No |
ClinGen 1000Genomes |
|
|
rs754830122 CA10185660 CA411537573 |
205 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA10185661 rs765088545 |
206 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA411537586 rs1454701318 |
207 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA411537598 rs752641514 |
209 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185662 rs752641514 |
209 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185663 rs61729256 |
210 | L>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1602133583 CA411537611 |
211 | L>P | No |
ClinGen Ensembl |
|
|
CA411537622 rs1480397958 |
213 | Y>C | No |
ClinGen TOPMed |
|
|
CA411537630 rs1380221678 |
214 | Y>C | No |
ClinGen gnomAD |
|
|
CA323616621 rs971051375 |
217 | Q>H | No |
ClinGen gnomAD |
|
|
rs779452615 CA10185688 |
217 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA411537874 rs1439546289 |
218 | G>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 219 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1177536061 CA411537895 |
221 | A>V | No |
ClinGen gnomAD |
|
|
CA411537909 rs376157573 |
223 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10185690 COSM1734162 rs376157573 |
223 | T>M | pancreas [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA323616622 rs369146536 |
225 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed |
|
rs747111711 CA10185692 COSM3405593 |
225 | R>H | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs770924441 CA10185694 |
227 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770924441 CA10185693 |
227 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185696 rs770040385 |
228 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA10185695 rs759782742 |
228 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411537939 rs1445949145 |
229 | N>D | No |
ClinGen gnomAD |
|
|
rs775242043 CA10185697 |
229 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA411537945 rs1447325418 |
230 | L>M | No |
ClinGen TOPMed |
|
|
CA10185699 rs764087977 |
232 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs371614653 CA10185701 |
233 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10185702 rs375249365 |
233 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs989542358 CA323616626 |
235 | I>S | No |
ClinGen TOPMed |
|
|
CA323616625 rs989542358 |
235 | I>T | No |
ClinGen TOPMed |
|
|
CA411537982 rs1189917377 |
236 | D>G | No |
ClinGen gnomAD |
|
|
CA323616627 rs921997600 |
237 | T>M | No |
ClinGen gnomAD |
|
| TCGA novel | 238 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411538001 rs1314551621 |
239 | D>N | No |
ClinGen TOPMed |
|
|
rs1455216214 CA411538019 |
241 | C>S | No |
ClinGen gnomAD |
|
|
rs1328514185 CA411538039 |
244 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA411538053 rs1382124964 |
246 | T>I | No |
ClinGen TOPMed |
|
|
CA323616629 rs932087452 |
247 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA411538060 rs1343732806 |
247 | S>R | No |
ClinGen Ensembl |
|
|
rs766186671 CA10185706 |
250 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 251 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411538090 rs1397832282 |
252 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1326464889 CA411538117 |
256 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1475567098 CA411538136 |
258 | S>* | No |
ClinGen TOPMed |
|
| TCGA novel | 258 | S>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA323616632 rs914874405 |
259 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs113086617 CA323616633 |
261 | D>E | No |
ClinGen Ensembl |
|
|
CA10185711 rs201298398 |
262 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10185710 rs373523566 |
262 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1293937846 CA411538172 |
264 | Q>R | No |
ClinGen gnomAD |
|
|
rs145882890 CA10185712 |
265 | W>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA323616634 rs372468624 |
268 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372468624 CA10185714 |
268 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1218747832 CA411538208 |
270 | E>K | No |
ClinGen gnomAD |
|
|
CA411538215 rs1196579733 |
271 | L>V | No |
ClinGen TOPMed |
|
|
rs749105164 CA10185716 |
272 | A>T | No |
ClinGen ExAC |
|
|
CA10185718 rs201288421 |
275 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs184514610 CA10185720 |
278 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10185721 rs772797917 |
278 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772797917 CA10185722 |
278 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753497112 CA10185724 |
279 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA411538279 rs1403473706 |
281 | N>I | No |
ClinGen gnomAD |
|
|
CA10185753 rs373890605 |
288 | G>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1166327078 CA411216053 |
289 | D>H | No |
ClinGen Ensembl |
|
|
rs200097992 CA10185758 |
290 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10185762 CA10185761 rs191090393 |
291 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA411216080 rs1477057331 |
292 | E>D | No |
ClinGen gnomAD |
|
|
rs769266395 CA10185763 |
292 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764425206 CA10185764 |
293 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411216085 rs1318967467 |
293 | A>V | No |
ClinGen TOPMed |
|
|
rs1602389203 CA411216086 |
294 | T>P | No |
ClinGen Ensembl |
|
|
rs1463469922 CA411216096 |
295 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1463469922 CA411216094 |
295 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA10185765 rs762152482 |
295 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs35396069 CA10185766 |
297 | A>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA411216110 rs1602389240 |
298 | D>A | No |
ClinGen Ensembl |
|
|
rs373876520 CA10185768 |
298 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA10185769 rs377502781 |
299 | K>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 300 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs925525198 CA323257116 |
301 | E>A | No |
ClinGen gnomAD |
|
|
rs778996357 CA10185772 |
301 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs541507557 CA411216175 |
307 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs758240961 CA10185774 |
308 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA323257130 rs935715320 |
309 | L>V | No |
ClinGen Ensembl |
|
|
rs1355764405 CA411216189 |
310 | S>P | No |
ClinGen gnomAD |
|
|
rs374139546 CA10185775 |
313 | L>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411216227 rs1193472098 |
315 | D>E | No |
ClinGen gnomAD |
|
|
CA10185777 rs770719701 |
318 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1377898378 CA411216257 |
320 | N>D | No |
ClinGen TOPMed |
|
|
rs1186020761 CA411216260 |
320 | N>S | No |
ClinGen gnomAD |
|
|
rs775103109 CA10185781 |
324 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA10185785 rs5997796 |
326 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA323257177 rs767615113 |
327 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA411216306 rs1602389389 |
327 | G>D | No |
ClinGen Ensembl |
|
|
CA323257172 rs767615113 |
327 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs371214985 CA10185787 |
328 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1033329 CA10185789 rs759516921 |
329 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1288239157 CA411216318 |
329 | A>V | No |
ClinGen gnomAD |
|
|
rs1281554102 CA411216327 |
331 | Q>* | No |
ClinGen gnomAD |
|
|
COSM1682203 CA10185791 rs752859103 |
332 | R>C | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA10185792 rs370057467 |
332 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1256073935 CA411216341 |
333 | S>C | No |
ClinGen gnomAD |
|
|
CA10185795 rs546901270 |
335 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1437474251 CA411216359 |
336 | E>D | No |
ClinGen gnomAD |
|
|
CA10185796 rs202094165 |
338 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs755547940 CA10185798 |
339 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA323257238 rs922326483 |
342 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs779498923 CA10185799 |
342 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1300808061 CA411216393 |
342 | I>V | No |
ClinGen gnomAD |
|
|
CA323257239 rs866742248 |
343 | P>L | No |
ClinGen Ensembl |
|
|
rs367883542 CA323257242 |
344 | S>P | No |
ClinGen ESP TOPMed |
|
|
rs201160009 CA10185800 |
350 | L>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1239455412 CA411216463 |
353 | V>M | No |
ClinGen gnomAD |
|
| TCGA novel | 355 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10185803 rs747327005 |
356 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185802 rs773995691 |
356 | R>W | Variant assessed as Somatic; 4.645e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1569158694 CA411216492 |
357 | A>G | No |
ClinGen Ensembl |
|
|
CA411216496 rs1602389608 |
358 | T>P | No |
ClinGen Ensembl |
|
|
rs771382561 CA10185804 |
359 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs1255755243 CA411216501 |
359 | L>V | No |
ClinGen gnomAD |
|
|
CA10185805 rs776976795 |
360 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA10185806 rs201306954 |
361 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10185809 rs775657267 |
361 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185808 rs775657267 |
361 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775657267 CA411216513 |
361 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185807 rs201306954 |
361 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411216516 rs1425453946 |
362 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA411216522 rs1434533047 |
363 | T>A | No |
ClinGen gnomAD |
|
|
CA10185810 rs764409649 |
364 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411216544 rs1291973246 |
366 | A>G | No |
ClinGen TOPMed |
|
|
CA411216550 rs1457640428 |
367 | M>T | No |
ClinGen TOPMed |
|
|
CA411216548 rs1462477697 |
367 | M>V | No |
ClinGen gnomAD |
|
|
COSM1682204 CA411218315 rs1232252210 |
370 | A>V | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1340781106 CA411218352 |
375 | L>F | No |
ClinGen TOPMed |
|
|
rs1380078857 CA411218367 |
378 | A>T | No |
ClinGen TOPMed |
|
|
rs749694033 CA10185861 |
379 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA10185862 rs755454223 |
380 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs779291599 CA10185864 |
382 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 382 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411218401 rs748253574 |
383 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs987366089 CA323266309 |
383 | R>Q | No |
ClinGen TOPMed |
|
|
CA10185865 rs748253574 |
383 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411218417 rs1423600236 |
385 | W>L | No |
ClinGen gnomAD |
|
|
rs772099698 CA10185866 |
386 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs773458323 CA10185867 |
387 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1033331 CA323266313 rs922992144 |
387 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA10185868 rs747270414 |
388 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA411218435 rs1478252504 |
388 | A>V | No |
ClinGen TOPMed |
|
|
CA10185869 rs376843263 |
390 | Q>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1282484705 CA411218452 |
391 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA411218453 rs1282484705 |
391 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
CA10185872 rs369396566 |
393 | Q>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA10185871 rs369396566 |
393 | Q>K | No |
ClinGen ESP ExAC gnomAD |
|
|
rs775350176 CA10185873 |
394 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185874 rs762505623 |
396 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185876 rs201398227 |
396 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA411218487 rs201398227 |
396 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10185875 rs762505623 |
396 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM50655 rs200799345 CA10185878 |
397 | V>M | breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs760619396 CA323266379 |
398 | H>L | No |
ClinGen Ensembl |
|
|
rs1189103133 CA411218533 |
403 | I>T | No |
ClinGen gnomAD |
|
|
rs1443680600 CA411218553 |
406 | L>V | No |
ClinGen gnomAD |
|
|
rs376816546 CA323266383 |
407 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA |
|
CA10185881 rs755365234 |
409 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA411218579 rs1271632949 |
410 | H>Y | No |
ClinGen TOPMed |
|
|
CA323266397 rs200779369 |
411 | N>T | No |
ClinGen Ensembl |
|
|
rs895865094 CA323266404 |
414 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs895865094 COSM1177520 CA411218606 |
414 | E>K | endometrium [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs202107614 CA10185884 |
415 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs748651216 CA10185883 |
415 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411218639 rs1324945557 |
419 | S>G | No |
ClinGen TOPMed |
|
|
rs1332332621 CA411218645 |
419 | S>R | No |
ClinGen gnomAD |
|
|
rs777786798 CA10185885 |
420 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA323266416 rs904686298 |
421 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA323266475 rs370162841 |
423 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs189335762 CA10185890 |
423 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs370162841 CA10185889 |
423 | R>W | Variant assessed as Somatic; 4.85e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1243020662 CA411218669 |
424 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA411218666 rs1199221543 |
424 | P>S | No |
ClinGen gnomAD |
|
|
rs775468125 CA10185892 |
425 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411218680 rs1416923492 |
426 | N>I | No |
ClinGen gnomAD |
|
|
CA411218678 rs1416923492 |
426 | N>T | No |
ClinGen gnomAD |
|
|
CA411218683 rs1158186386 |
427 | P>T | No |
ClinGen gnomAD |
|
|
CA411218689 rs1252979779 |
428 | S>T | No |
ClinGen TOPMed |
|
|
rs1377970271 CA411218697 |
429 | K>E | No |
ClinGen gnomAD |
|
|
CA411218701 CA323266490 rs904655120 |
429 | K>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 429 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1170782156 CA411218705 |
430 | S>N | No |
ClinGen gnomAD |
|
|
CA411218723 rs1405184013 |
432 | I>T | No |
ClinGen gnomAD |
|
|
rs559728473 CA10185893 |
433 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs769068545 CA10185915 |
435 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 436 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374644984 CA10185917 |
438 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1267882991 CA411218801 |
441 | G>R | No |
ClinGen gnomAD |
|
|
CA411218820 rs1385577961 |
443 | D>E | No |
ClinGen TOPMed |
|
|
rs963423276 CA323267098 |
443 | D>N | No |
ClinGen Ensembl |
|
|
CA411218844 rs1569167097 |
446 | E>D | No |
ClinGen Ensembl |
|
|
CA323267102 rs994537160 |
447 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA10185922 rs368427485 |
451 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1302964185 CA411218890 |
453 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1361543001 CA411218893 |
453 | F>S | No |
ClinGen gnomAD |
|
|
CA411218928 rs142260765 |
458 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs142260765 CA10185926 |
458 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA323267167 rs917130929 |
460 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1312805083 CA411218960 |
463 | I>L | No |
ClinGen gnomAD |
|
|
CA411218970 rs1602419517 |
464 | T>N | No |
ClinGen Ensembl |
|
|
rs748338099 CA10185930 |
465 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749031437 CA10185932 |
468 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10185933 rs768629185 |
470 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1243622779 CA411219011 |
471 | E>K | No |
ClinGen TOPMed |
|
|
rs1345523315 CA411219420 |
474 | R>G | No |
ClinGen TOPMed |
|
|
CA411219432 rs1161072492 |
475 | K>I | No |
ClinGen TOPMed |
|
|
CA10185954 rs777767806 |
475 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA411219435 rs1455822861 |
476 | A>P | No |
ClinGen TOPMed |
|
|
CA411219440 rs1415354885 |
477 | E>K | No |
ClinGen gnomAD |
|
|
rs746490863 CA411219451 |
478 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746490863 CA10185955 |
478 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746490863 CA411219452 |
478 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411219456 rs1188742421 |
479 | S>T | No |
ClinGen TOPMed |
|
|
CA323236592 rs943797904 |
480 | T>N | No |
ClinGen TOPMed |
|
|
CA411219463 rs1476191788 |
480 | T>S | No |
ClinGen TOPMed |
|
|
CA10185957 rs776120654 CA411219466 |
481 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1262839146 CA411219472 |
482 | T>A | No |
ClinGen TOPMed |
|
|
rs35702187 CA10185959 |
482 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10185961 rs762172674 |
483 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411219490 rs376852480 |
485 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA323236652 rs376852480 |
485 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA411219497 rs1321322922 |
486 | D>G | No |
ClinGen gnomAD |
|
|
rs1033853388 CA411219494 |
486 | D>N | No |
ClinGen TOPMed |
|
|
CA323236665 rs1033853388 |
486 | D>Y | No |
ClinGen TOPMed |
|
| TCGA novel | 487 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760647066 CA10185964 CA411219501 |
487 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA10185965 rs766520377 |
488 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA411219528 rs1179956963 |
491 | D>N | No |
ClinGen gnomAD |
|
|
CA10185966 rs753893861 |
492 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753893861 CA411219540 |
492 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757161855 CA10185993 |
493 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA10185992 rs180898388 |
493 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10185994 rs780996953 |
494 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA323237017 rs1055359185 |
495 | D>G | No |
ClinGen TOPMed |
|
|
rs769729099 CA10185996 |
496 | G>T | No |
ClinGen ExAC |
|
|
rs374035667 CA10185999 |
498 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA10186001 rs778150740 |
499 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200532645 COSM1243474 CA10186003 |
500 | V>M | oesophagus [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1197667059 CA411219597 |
501 | P>A | No |
ClinGen TOPMed |
|
|
rs746884351 CA10186005 |
502 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1013749234 CA323237089 |
503 | G>C | No |
ClinGen TOPMed |
|
|
CA10186006 rs770037079 |
503 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA411219619 rs1298566748 |
504 | S>L | No |
ClinGen gnomAD |
|
|
rs1045911167 CA323237091 |
505 | S>A | No |
ClinGen gnomAD |
|
|
rs1380423282 CA411219640 |
508 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1482683922 CA411219643 |
508 | K>R | No |
ClinGen TOPMed |
|
|
CA411219649 rs200412151 |
509 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10186007 rs200412151 |
509 | R>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA323237099 rs796632136 |
510 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA10186008 rs763190138 |
510 | R>Q | No |
ClinGen ExAC |
|
|
rs1341165965 CA411219664 |
512 | R>C | No |
ClinGen gnomAD |
|
|
COSM1535279 CA10186009 rs372873880 |
512 | R>H | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1341165965 CA411219662 |
512 | R>S | No |
ClinGen gnomAD |
|
|
CA411219678 rs1342551103 |
514 | P>H | No |
ClinGen TOPMed |
|
|
CA10186010 rs751302268 |
515 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411219698 rs1241415820 |
517 | P>H | No |
ClinGen gnomAD |
|
|
rs538150921 CA10186012 |
518 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs750411254 CA10186013 |
519 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs779791614 CA323237184 |
522 | N>H | No |
ClinGen Ensembl |
|
|
CA411219769 rs892969852 |
527 | M>K | No |
ClinGen Ensembl |
|
|
CA323237201 rs892969852 |
527 | M>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs377663086 CA323237206 |
529 | N>D | No |
ClinGen Ensembl |
|
|
CA323237213 rs996789022 |
529 | N>S | No |
ClinGen Ensembl |
|
|
rs1461384458 CA411219791 |
530 | C>Y | No |
ClinGen gnomAD |
|
|
rs753367837 CA10186017 |
532 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA411219803 rs1240948789 |
532 | G>S | No |
ClinGen gnomAD |
|
|
CA323237243 rs891144171 |
533 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs202112750 CA10186018 |
533 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 537 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411219836 rs1402740871 |
537 | R>S | No |
ClinGen gnomAD |
|
|
rs747391730 CA10186020 |
539 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA323237260 rs781243314 |
540 | M>I | No |
ClinGen TOPMed |
|
| rs781758349 | 541 | P>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771255313 COSM1033332 CA10186022 |
541 | P>L | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
| TCGA novel | 541 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411220217 rs1214703921 |
545 | N>K | No |
ClinGen gnomAD |
|
|
rs201627938 CA10186050 |
545 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA411220221 rs1475216862 |
546 | E>K | No |
ClinGen gnomAD |
|
|
CA323238372 rs887083841 |
547 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA411220240 rs887083841 |
547 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs760467676 CA10186051 |
548 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411220283 rs1490781912 |
550 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA10186053 rs369610933 |
550 | M>T | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1268169825 CA411220313 |
553 | R>Q | No |
ClinGen gnomAD |
|
|
CA411220310 rs1219908596 |
553 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA411220323 rs759061804 |
555 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA10186054 rs759061804 |
555 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs1188397195 CA411220326 |
556 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA10186055 rs764691938 |
557 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1164480950 CA411220390 |
561 | H>Q | No |
ClinGen gnomAD |
|
|
rs1387242914 CA411220407 |
563 | L>Q | No |
ClinGen gnomAD |
|
|
rs1421779532 CA411220413 |
564 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA411220415 rs1421779532 |
564 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA411220450 CA411220448 rs1163326015 |
566 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA411220472 rs1266328545 |
568 | V>A | No |
ClinGen TOPMed |
|
|
CA411220479 rs1287582762 |
569 | H>Y | No |
ClinGen gnomAD |
|
|
CA10186059 rs371681629 |
570 | C>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1361139215 CA411220591 |
577 | M>K | No |
ClinGen gnomAD |
|
|
rs1217886976 CA411220653 |
582 | A>T | No |
ClinGen gnomAD |
|
|
CA10186065 rs748239834 |
582 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs773485526 CA411220696 |
585 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs773485526 CA10186068 |
585 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA411220715 rs1183419736 |
586 | S>F | No |
ClinGen gnomAD |
|
|
rs1402763452 CA411220726 |
587 | S>F | No |
ClinGen gnomAD |
|
|
CA323238470 rs948030097 |
589 | S>F | No |
ClinGen Ensembl |
|
|
CA411220768 rs1345060385 |
591 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
CA411220775 rs1456307535 |
592 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
CA411220781 rs1336817328 |
593 | H>R | No |
ClinGen gnomAD |
|
|
rs373508850 CA10186070 |
594 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10186072 rs776598212 |
596 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1225187788 CA411220855 |
599 | F>S | No |
ClinGen gnomAD |
|
|
rs1267999132 CA411220881 |
601 | P>S | No |
ClinGen gnomAD |
|
|
CA10186074 rs769786455 |
602 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs745826009 CA323238541 |
604 | G>W | No |
ClinGen Ensembl |
|
| TCGA novel | 605 | E>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1459998985 CA411220987 |
608 | E>D | No |
ClinGen gnomAD |
|
|
CA10186076 rs762623108 |
608 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA323238545 rs756059349 |
609 | L>V | No |
ClinGen Ensembl |
|
| TCGA novel | 610 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1183258470 CA411221015 |
611 | R>C | No |
ClinGen gnomAD |
|
|
rs1233601034 CA411221016 |
611 | R>H | No |
ClinGen gnomAD |
|
|
CA323238552 rs758595430 |
612 | L>V | No |
ClinGen Ensembl |
|
|
CA10186078 rs41282553 |
613 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1208609404 CA411221046 |
614 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs754249899 CA10186081 |
615 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1212863229 CA411221073 |
616 | G>S | No |
ClinGen gnomAD |
|
|
CA10186083 rs779479198 |
618 | R>C | Variant assessed as Somatic; 5.714e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1354692147 CA411221110 |
618 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA411221101 rs779479198 |
618 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1257969538 CA411221139 |
621 | C>S | No |
ClinGen gnomAD |
|
|
rs1277551448 CA411221146 |
622 | E>G | No |
ClinGen gnomAD |
|
|
CA411221412 rs1602429248 |
626 | H>P | No |
ClinGen Ensembl |
|
|
CA411221420 rs1602429254 |
627 | H>P | No |
ClinGen Ensembl |
|
|
CA411221423 CA10186109 rs552962356 |
627 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1297153643 CA411221425 |
628 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1297153643 CA411221424 |
628 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs768739585 CA323240779 |
629 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs182014737 CA10186115 |
629 | P>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs182014737 CA411221431 |
629 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10186116 rs182014737 |
629 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10186114 rs768739585 |
629 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768739585 CA411221430 |
629 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10186120 rs765672869 |
630 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA323240846 rs1036327739 |
631 | A>P | No |
ClinGen Ensembl |
|
|
rs763399836 CA10186122 COSM1308070 |
632 | A>V | Variant assessed as Somatic; 0.0002786 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs751635643 CA10186124 |
633 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411221488 rs1251219159 |
638 | K>N | No |
ClinGen gnomAD |
|
|
rs994613256 CA323240875 |
639 | H>R | No |
ClinGen TOPMed |
|
|
rs767612450 CA10186126 |
641 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200062217 CA10186127 |
642 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs199797396 CA10186128 |
642 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 644 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1194318178 CA411221554 |
647 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA10186132 rs749106633 |
648 | T>S | No |
ClinGen ExAC |
|
|
rs1399085109 CA411221572 |
650 | S>F | No |
ClinGen gnomAD |
|
|
CA10186134 rs779056913 |
652 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs772707852 CA10186137 |
654 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771660831 CA10186136 |
654 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1330917217 CA411221603 |
655 | G>E | No |
ClinGen TOPMed |
|
|
CA10186138 rs746631031 |
656 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1020627087 CA323240997 |
657 | Y>H | No |
ClinGen TOPMed |
|
|
rs567050952 CA411221647 |
658 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10186140 rs371407014 |
661 | M>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs371407014 CA10186141 |
661 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs966491056 CA323241013 |
662 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1266918142 CA411221689 |
662 | P>S | No |
ClinGen gnomAD |
|
|
CA411221792 rs1195775351 |
665 | A>T | No |
ClinGen TOPMed |
|
|
CA10186171 rs759374438 |
669 | E>K | Variant assessed as Somatic; 4.638e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA10186172 rs765083973 |
669 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA10186174 rs35988107 RCV000955602 |
673 | S>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA411221974 rs1263944195 |
677 | Y>C | No |
ClinGen TOPMed |
|
|
CA323241363 rs375434954 |
678 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10186176 rs375434954 |
678 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10186178 rs780791788 |
682 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1189597149 CA411222082 |
685 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA10186179 rs370229726 |
687 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411222105 rs1266792857 |
687 | H>Y | No |
ClinGen gnomAD |
|
|
CA10186180 rs769461981 |
688 | N>I | No |
ClinGen ExAC gnomAD |
|
|
rs769461981 CA323241385 |
688 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs779282269 CA10186181 |
689 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1164597850 CA411222154 |
691 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA411222240 rs773647723 |
697 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA323241404 rs967555975 |
697 | D>N | No |
ClinGen TOPMed |
|
| TCGA novel | 703 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA323241573 rs1002382369 |
703 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA411222371 rs1245123745 |
705 | V>L | No |
ClinGen gnomAD |
|
|
CA10186217 rs755634986 |
707 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA323241615 rs896172406 |
710 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA411222452 rs1602430683 |
711 | D>A | No |
ClinGen Ensembl |
|
|
CA10186220 rs777447564 |
712 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753468731 CA10186219 |
712 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA411222472 rs1385846106 |
713 | C>Y | No |
ClinGen gnomAD |
|
|
CA411222534 rs1456189978 |
718 | L>V | No |
ClinGen gnomAD |
|
|
CA10186221 rs777949664 |
719 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1445626901 CA411222566 |
720 | Y>* | No |
ClinGen gnomAD |
|
|
CA411222648 rs1374028476 |
726 | E>D | No |
ClinGen gnomAD |
|
|
CA411222682 rs548187834 |
729 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10186224 rs548187834 COSM725918 |
729 | R>Q | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1009182762 CA323241683 |
729 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1224136662 CA411222697 |
730 | K>N | No |
ClinGen gnomAD |
|
|
rs1490646228 CA411222773 |
733 | G>E | No |
ClinGen gnomAD |
|
|
CA411222775 rs1247969067 |
734 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs764983988 CA411222801 |
736 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10186239 rs764983988 |
736 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1171643230 CA411222832 |
738 | S>N | No |
ClinGen gnomAD |
|
|
rs1419715882 CA411222838 |
738 | S>R | No |
ClinGen gnomAD |
|
|
CA323241792 rs953552864 |
739 | Q>P | No |
ClinGen TOPMed |
|
|
CA411222876 rs1166478053 |
741 | K>R | No |
ClinGen gnomAD |
|
|
rs1157103508 CA411222888 |
742 | A>D | No |
ClinGen TOPMed |
|
|
CA323241793 rs867704373 |
744 | Y>H | No |
ClinGen Ensembl |
|
|
rs757746296 CA10186242 |
745 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10186241 rs757746296 |
745 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1329424145 CA411222939 |
747 | S>Y | No |
ClinGen gnomAD |
|
|
COSM444875 rs367777319 CA10186244 |
748 | G>S | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs370041552 CA10186245 |
749 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411222968 rs1274333840 |
750 | W>R | No |
ClinGen gnomAD |
|
|
rs972062179 CA323241869 |
755 | E>D | No |
ClinGen TOPMed |
|
|
CA411223053 rs1569171440 |
755 | E>G | No |
ClinGen Ensembl |
|
|
CA411223048 rs1212181838 |
755 | E>K | No |
ClinGen gnomAD |
|
|
CA411223084 rs1288266882 |
757 | S>F | No |
ClinGen gnomAD |
|
|
CA411223105 rs1197533794 |
759 | V>F | No |
ClinGen gnomAD |
|
|
CA411223111 rs1214005463 |
759 | V>G | No |
ClinGen TOPMed |
|
|
CA411223121 rs1450910310 |
760 | M>T | No |
ClinGen gnomAD |
|
|
VAR_053546 rs34240867 CA10186248 |
760 | M>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs199668359 CA10186249 |
761 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411223170 rs1444945995 |
764 | P>A | No |
ClinGen gnomAD |
|
|
CA411223173 rs1164947227 |
764 | P>H | No |
ClinGen gnomAD |
|
|
CA411223177 rs1164947227 |
764 | P>L | No |
ClinGen gnomAD |
|
|
rs1319034067 CA411223193 |
765 | S>R | No |
ClinGen gnomAD |
|
|
rs771892551 CA10186251 |
768 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773018687 CA10186252 |
768 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs34929946 CA10186254 CA411223263 |
770 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 770 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775936768 CA10186255 |
771 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 773 | Q>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411223305 rs1283001850 |
776 | V>A | No |
ClinGen gnomAD |
|
|
rs1283001850 CA411223306 |
776 | V>G | No |
ClinGen gnomAD |
|
|
CA10186258 rs752439752 |
780 | L>M | No |
ClinGen ExAC |
|
|
rs1268236661 CA411223336 |
780 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA411223361 rs1206443153 |
783 | K>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA411223394 rs1189351536 |
786 | W>R | No |
ClinGen gnomAD |
|
|
rs1366684425 CA411223412 |
787 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs762727484 CA10186259 |
787 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA411223447 rs1602431507 |
789 | Y>S | No |
ClinGen Ensembl |
|
|
CA323241977 rs973411668 |
790 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA10186261 rs750813590 |
790 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10186263 rs780682651 |
792 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1332574611 CA411223482 |
792 | P>S | No |
ClinGen gnomAD |
|
|
rs1370245887 CA411225119 |
794 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1387950084 CA411225125 |
795 | A>G | No |
ClinGen gnomAD |
|
|
rs1367705979 CA411225123 |
795 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1367705979 CA411225121 |
795 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA10186304 rs748876741 |
796 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA411225153 rs1167470785 |
798 | M>I | No |
ClinGen TOPMed |
|
|
rs938316123 CA323250345 |
799 | Y>D | No |
ClinGen gnomAD |
|
|
rs774105486 CA10186306 |
800 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768413026 CA10186305 |
800 | Y>H | No |
ClinGen ExAC |
|
|
CA10186307 rs373026728 |
801 | F>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411225186 rs1490296617 |
803 | E>Q | No |
ClinGen TOPMed |
|
|
CA10186309 rs776880313 |
804 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA323250360 rs913025770 |
805 | A>V | No |
ClinGen Ensembl |
|
|
CA10186310 rs759975214 |
809 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3379301 rs765737055 CA10186311 |
810 | E>K | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs758531103 CA10186314 |
812 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA10186315 rs548359613 |
813 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 814 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs568444280 CA10186318 |
815 | V>I | Variant assessed as Somatic; 0.0005611 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1344643894 CA411225294 |
816 | A>S | No |
ClinGen TOPMed |
|
|
CA411225297 rs1389629648 |
816 | A>V | No |
ClinGen gnomAD |
|
|
CA411225318 rs1362785195 |
819 | D>Y | No |
ClinGen gnomAD |
|
|
CA411225333 rs1313432337 |
821 | R>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 822 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1353047662 CA411225354 |
823 | R>P | No |
ClinGen TOPMed |
|
|
rs1219525485 CA411225360 |
824 | P>A | No |
ClinGen gnomAD |
|
|
CA411225370 rs1404389112 |
825 | D>V | No |
ClinGen TOPMed |
|
|
CA323250487 rs1042880246 |
827 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA10186324 rs773762192 |
827 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1602456040 CA411225400 |
829 | M>V | No |
ClinGen Ensembl |
|
|
rs1602456061 CA411225411 |
830 | E>G | No |
ClinGen Ensembl |
|
|
rs747783224 CA10186325 |
830 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1602456072 CA411225424 |
832 | G>S | No |
ClinGen Ensembl |
|
|
rs776910799 CA10186327 |
833 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776910799 CA411225434 |
833 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10186328 COSM1415747 rs759958825 |
833 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1569178475 CA411225444 |
834 | W>* | No |
ClinGen Ensembl |
|
|
rs776025563 CA10186330 |
835 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA411225450 rs1422560692 |
835 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA10186331 rs373681969 |
836 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA411225463 rs1385986044 |
837 | A>T | No |
ClinGen gnomAD |
|
|
rs1429816607 CA411225476 |
838 | N>S | No |
ClinGen gnomAD |
|
|
CA411225489 rs1303186831 |
840 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1191182871 CA411225508 |
842 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA10186333 rs751604014 |
842 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762029972 CA411225516 |
843 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1311829913 CA411225517 |
843 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA10186334 rs762029972 |
843 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1266547826 CA411225533 |
845 | E>K | No |
ClinGen gnomAD |
|
|
rs1328720124 CA411225544 |
846 | E>G | No |
ClinGen gnomAD |
|
|
CA323250531 rs906348599 |
847 | K>T | No |
ClinGen TOPMed |
|
|
rs1414965107 CA411225558 |
848 | Q>E | No |
ClinGen gnomAD |
|
|
CA411225567 rs1211325582 |
849 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs756024625 CA10186337 |
850 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10186338 rs780113408 |
850 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA411225574 rs756024625 |
850 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411225585 rs1253147849 |
851 | S>L | No |
ClinGen gnomAD |
|
|
rs754890196 CA10186340 |
852 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs754890196 CA10186341 |
852 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA10186339 rs753790117 |
852 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA10186342 rs747613055 |
853 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377386207 CA10186343 RCV000967586 |
853 | R>H | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA10186345 rs746210030 |
854 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA10186344 rs777458054 |
854 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1351033294 CA411225613 |
855 | R>Q | No |
ClinGen gnomAD |
|
|
rs1286509270 CA411225619 |
856 | L>V | No |
ClinGen gnomAD |
|
|
CA10186348 rs763459669 |
857 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs775855979 CA10186347 |
857 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411225646 rs1399344187 |
859 | C>* | No |
ClinGen TOPMed |
|
|
CA10186349 rs769049978 |
859 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA411225653 rs1176271368 |
860 | G>E | No |
ClinGen TOPMed |
|
|
CA10186350 CA411225649 rs774486423 |
860 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA323250606 rs3804083 |
861 | P>A | No |
ClinGen TOPMed |
|
|
CA323250610 rs1025648073 |
861 | P>L | No |
ClinGen gnomAD |
|
|
rs1025648073 CA411225658 |
861 | P>Q | No |
ClinGen gnomAD |
|
|
rs1025648073 CA411225659 |
861 | P>R | No |
ClinGen gnomAD |
|
| TCGA novel | 861 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA323250590 rs3804083 |
861 | P>T | No |
ClinGen TOPMed |
|
|
CA323250619 rs1005604421 |
864 | S>G | No |
ClinGen Ensembl |
|
|
CA10186354 rs750718360 |
866 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs761012867 CA10186355 |
867 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411225706 rs761012867 |
867 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748557497 CA10186391 |
871 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772716275 CA10186392 |
872 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA411225806 rs773355078 |
873 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773355078 CA10186393 |
873 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10186395 rs554774114 |
875 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs759342507 CA10186397 |
876 | Y>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs574796951 CA10186398 |
877 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs574796951 CA411225890 |
877 | T>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA411225943 rs1569178902 |
880 | W>* | No |
ClinGen Ensembl |
|
|
rs762811572 CA10186400 |
882 | E>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 882 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10186401 rs762811572 |
882 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA411225977 rs1282874190 COSM3800138 |
882 | E>Q | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA411226018 rs1268414123 |
885 | L>V | No |
ClinGen gnomAD |
|
|
CA411226047 rs3804085 |
886 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs368445421 CA10186405 |
888 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200815730 CA10186407 CA10186408 |
890 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1394113039 CA411226101 |
891 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs758965012 CA10186409 |
891 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10186410 rs778478467 |
891 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA411226104 rs758965012 |
891 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1394113039 CA411226097 |
891 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1602457098 CA411226139 |
893 | A>G | No |
ClinGen Ensembl |
|
|
rs200895779 CA10186411 |
895 | V>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs771174490 CA10186412 |
896 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
CA411226183 rs1253259760 |
897 | K>Q | No |
ClinGen TOPMed |
|
|
rs746028741 CA10186414 |
900 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA323250923 rs888408531 |
900 | Y>H | No |
ClinGen Ensembl |
|
|
CA10186415 rs770060182 |
903 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1355381602 CA411226326 |
908 | D>N | No |
ClinGen gnomAD |
|
|
rs1413685645 CA411226351 |
909 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1288451627 CA411226367 |
910 | H>P | No |
ClinGen gnomAD |
|
|
rs528544450 CA10186417 |
911 | M>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10186418 rs528544450 |
911 | M>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1045143073 CA323250933 |
911 | M>V | No |
ClinGen Ensembl |
|
|
rs1345517831 CA411226408 |
913 | P>A | No |
ClinGen gnomAD |
|
|
rs367679150 CA10186420 |
914 | N>D | No |
ClinGen ESP ExAC gnomAD |
No associated diseases with Q969R2
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| apical dendrite | A dendrite that emerges near the apical pole of a neuron. In bipolar neurons, apical dendrites are located on the opposite side of the soma from the axon. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| perinuclear endoplasmic reticulum | The portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus. The lumen of the perinuclear endoplasmic reticulum is contiguous with the nuclear envelope lumen (also called perinuclear space), the region between the inner and outer nuclear membranes. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| cholesterol binding | Binding to cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. |
| sterol binding | Binding to a sterol, a steroid containing a hydroxy group in the 3 position, closely related to cholestan-3-ol. |
| sterol transporter activity | Enables the directed movement of sterols into, out of or within a cell, or between cells. Sterol are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| spermatid development | The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure. |
9 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9BZF1 | OSBPL8 | Oxysterol-binding protein-related protein 8 | Homo sapiens (Human) | PR |
| Q9H0X9 | OSBPL5 | Oxysterol-binding protein-related protein 5 | Homo sapiens (Human) | PR |
| Q9H1P3 | OSBPL2 | Oxysterol-binding protein-related protein 2 | Homo sapiens (Human) | PR |
| P22059 | OSBP | Oxysterol-binding protein 1 | Homo sapiens (Human) | PR |
| Q3B7Z2 | Osbp | Oxysterol-binding protein 1 | Mus musculus (Mouse) | PR |
| Q5QNQ6 | Osbp2 | Oxysterol-binding protein 2 | Mus musculus (Mouse) | PR |
| Q8S8P9 | ORP1B | Oxysterol-binding protein-related protein 1B | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SAF0 | ORP1D | Oxysterol-binding protein-related protein 1D | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8L751 | ORP1C | Oxysterol-binding protein-related protein 1C | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGKAAAPSRG | GGCGGRSRGL | SSLFTVVPCL | SCHTAAPGMS | ASTSGSGPEP | KPQPQPVPEP |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ERGPLSEQVS | EAVSEAVPRS | EPVSETTSEP | EPGAGQPSEL | LQGSRPGSES | SSGVGAGPFT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KAASEPLSRA | VGSATFLRPE | SGSLPALKPL | PLLRPGQAKT | PLGVPMSGTG | TTSSAPLALL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| PLDSFEGWLL | KWTNYLKGYQ | RRWFVLGNGL | LSYYRNQGEM | AHTCRGTINL | STAHIDTEDS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| CGILLTSGAR | SYHLKASSEV | DRQQWITALE | LAKAKAVRVM | NTHSDDSGDD | DEATTPADKS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ELHHTLKNLS | LKLDDLSTCN | DLIAKHGAAL | QRSLTELDGL | KIPSESGEKL | KVVNERATLF |
| 370 | 380 | 390 | 400 | 410 | 420 |
| RITSNAMINA | CRDFLELAEI | HSRKWQRALQ | YEQEQRVHLE | ETIEQLAKQH | NSLERAFHSA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| PGRPANPSKS | FIEGSLLTPK | GEDSEEDEDT | EYFDAMEDST | SFITVITEAK | EDSRKAEGST |
| 490 | 500 | 510 | 520 | 530 | 540 |
| GTSSVDWSSA | DNVLDGASLV | PKGSSKVKRR | VRIPNKPNYS | LNLWSIMKNC | IGRELSRIPM |
| 550 | 560 | 570 | 580 | 590 | 600 |
| PVNFNEPLSM | LQRLTEDLEY | HHLLDKAVHC | TSSVEQMCLV | AAFSVSSYST | TVHRIAKPFN |
| 610 | 620 | 630 | 640 | 650 | 660 |
| PMLGETFELD | RLDDMGLRSL | CEQVSHHPPS | AAHYVFSKHG | WSLWQEITIS | SKFRGKYISI |
| 670 | 680 | 690 | 700 | 710 | 720 |
| MPLGAIHLEF | QASGNHYVWR | KSTSTVHNII | VGKLWIDQSG | DIEIVNHKTN | DRCQLKFLPY |
| 730 | 740 | 750 | 760 | 770 | 780 |
| SYFSKEAARK | VTGVVSDSQG | KAHYVLSGSW | DEQMECSKVM | HSSPSSPSSD | GKQKTVYQTL |
| 790 | 800 | 810 | 820 | 830 | 840 |
| SAKLLWKKYP | LPENAENMYY | FSELALTLNE | HEEGVAPTDS | RLRPDQRLME | KGRWDEANTE |
| 850 | 860 | 870 | 880 | 890 | 900 |
| KQRLEEKQRL | SRRRRLEACG | PGSSCSSEEE | KEADAYTPLW | FEKRLDPLTG | EMACVYKGGY |
| 910 | |||||
| WEAKEKQDWH | MCPNIF |