Q9H0X9
Gene name |
OSBPL5 |
Protein name |
Oxysterol-binding protein-related protein 5 |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:114879 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9H0X9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9H0X9-F1 | Predicted | AlphaFoldDB |
850 variants for Q9H0X9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1306328082 CA379164445 |
4 | E>G | No |
ClinGen gnomAD |
|
|
CA5825707 rs748275638 |
5 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379164429 rs1327855316 |
5 | A>V | No |
ClinGen gnomAD |
|
|
CA379164424 rs1285955394 |
6 | F>I | No |
ClinGen TOPMed gnomAD |
|
|
CA379164426 rs1285955394 |
6 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs566705914 CA5825706 |
7 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5825704 rs374354189 |
8 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs367574888 CA5825705 |
8 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1436120489 CA379164393 |
9 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1436120489 CA379164395 |
9 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA5825703 rs534210917 |
9 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA216427887 rs534210917 |
9 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825702 rs747214162 |
10 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825701 rs370423999 |
10 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379164388 rs747214162 |
10 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379164362 rs1387960091 |
12 | S>A | No |
ClinGen gnomAD |
|
|
rs746558203 CA5825700 |
12 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs746558203 CA379164360 |
12 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA216427860 rs551861110 |
14 | C>Y | No |
ClinGen 1000Genomes |
|
|
CA379164313 rs1476918111 |
16 | P>L | No |
ClinGen gnomAD |
|
|
rs752409175 CA5825697 |
16 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1428631714 CA379164279 |
19 | T>I | No |
ClinGen TOPMed |
|
|
CA5825695 rs149631640 |
20 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765072053 CA5825696 |
20 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs921057456 CA216427843 |
21 | Q>R | No |
ClinGen TOPMed |
|
|
CA379164231 rs1464353870 |
23 | V>A | No |
ClinGen gnomAD |
|
|
rs138284443 CA5825693 |
24 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150443775 CA216427783 |
26 | R>P | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs150443775 CA216427786 |
26 | R>Q | No |
ClinGen ESP TOPMed gnomAD |
|
| TCGA novel | 26 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1217176983 CA379164191 |
27 | K>E | No |
ClinGen gnomAD |
|
|
CA216427747 rs758721623 |
30 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825689 COSM3383423 rs761967795 |
30 | R>Q | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs758721623 CA5825690 |
30 | R>W | Variant assessed as Somatic; 0.0003553 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA379164123 rs1478716543 |
32 | L>F | No |
ClinGen Ensembl |
|
|
rs774579932 CA5825688 |
35 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA216427719 rs774579932 |
35 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1467595321 CA379164089 |
36 | G>R | No |
ClinGen gnomAD |
|
|
CA5825685 CA5825686 rs141688462 |
37 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5825684 rs770270209 |
38 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA5825682 rs777355887 |
39 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825683 rs746387485 |
39 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA379163987 rs1246056355 |
44 | S>N | No |
ClinGen gnomAD |
|
|
CA5825680 rs747760091 |
45 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs374651925 CA5825658 |
46 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1409488245 CA379163668 |
47 | K>N | No |
ClinGen gnomAD |
|
|
CA379163657 rs1394040110 |
49 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA379163658 rs1394040110 |
49 | M>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 51 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779656230 CA5825657 |
52 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA5825655 rs549434348 |
53 | G>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs35933962 CA5825653 RCV000967188 |
54 | P>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs35933962 CA379163621 |
54 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs35933962 CA5825654 |
54 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs370581882 CA5825651 |
55 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379163601 rs1269066463 |
58 | R>T | No |
ClinGen gnomAD |
|
|
rs185192473 CA5825648 |
59 | D>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA379163593 rs1489020884 |
59 | D>G | No |
ClinGen gnomAD |
|
|
rs1211940330 CA379163597 |
59 | D>Y | No |
ClinGen gnomAD |
|
|
CA216425179 rs111931449 |
61 | G>E | No |
ClinGen Ensembl |
|
|
CA5825645 rs201518381 |
62 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5825643 rs773935542 |
63 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 63 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5825641 rs748843576 |
64 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA5825640 rs775240909 |
64 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379163564 rs775240909 |
64 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769452544 CA5825639 |
65 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1323799974 CA379163560 |
65 | P>T | No |
ClinGen gnomAD |
|
|
rs1388694884 CA379163556 |
66 | S>G | No |
ClinGen gnomAD |
|
|
CA5825638 rs745718340 |
66 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757118246 CA5825635 |
69 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA216425121 rs1014757299 |
70 | K>E | No |
ClinGen gnomAD |
|
|
CA379163527 rs1209801768 |
70 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs758534484 CA5825632 |
71 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA5825631 rs752828587 |
73 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379163488 rs1211347684 |
75 | E>G | No |
ClinGen TOPMed |
|
| TCGA novel | 76 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs752183600 CA5825600 |
77 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1432000055 CA379163475 |
77 | R>K | No |
ClinGen gnomAD |
|
|
CA5825597 rs201350460 |
81 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA379163440 rs1221069431 |
82 | S>* | No |
ClinGen TOPMed |
|
|
CA379163438 rs967779364 |
83 | D>H | No |
ClinGen TOPMed |
|
|
CA216421628 rs967779364 |
83 | D>N | No |
ClinGen TOPMed |
|
|
CA5825596 rs770678661 |
86 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs760510484 CA5825595 |
87 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA379163402 rs1212604867 |
88 | S>P | No |
ClinGen Ensembl |
|
|
CA379163400 rs1255657028 |
88 | S>Y | No |
ClinGen gnomAD |
|
|
rs748044156 CA5825592 |
89 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs748044156 CA5825593 |
89 | P>S | No |
ClinGen ExAC gnomAD |
|
|
VAR_060079 CA5825591 rs6578323 |
90 | T>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1590682694 CA379163393 |
90 | T>P | No |
ClinGen Ensembl |
|
|
CA5825589 rs749482626 |
91 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379163386 rs1564843991 |
91 | A>V | No |
ClinGen Ensembl |
|
|
rs1284716556 CA379163382 |
92 | R>W | No |
ClinGen gnomAD |
|
|
rs1445762550 CA379163374 |
93 | V>F | No |
ClinGen TOPMed |
|
|
rs1353085511 CA379163369 |
94 | T>A | No |
ClinGen gnomAD |
|
|
CA379163348 rs1564843961 |
97 | E>* | No |
ClinGen Ensembl |
|
|
CA379163335 rs1309468533 |
98 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1564843950 CA379163332 |
99 | L>F | No |
ClinGen Ensembl |
|
|
CA379163309 rs1467044177 |
101 | A>T | No |
ClinGen gnomAD |
|
|
rs200060869 CA5825561 |
101 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1315824090 CA379163294 |
103 | K>* | No |
ClinGen gnomAD |
|
|
CA379163288 rs1281696038 |
104 | E>K | No |
ClinGen gnomAD |
|
|
rs755737034 CA5825559 |
106 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA216421320 rs973797705 |
107 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA5825558 rs750069385 |
107 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1312019862 CA379163252 |
109 | E>* | No |
ClinGen TOPMed |
|
|
CA5825557 rs767303407 |
109 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA379163247 rs1369342733 |
110 | K>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 110 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 111 | K>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA379163235 rs1323154221 |
111 | K>R | No |
ClinGen gnomAD |
|
|
rs1457825257 CA379163229 |
112 | R>C | No |
ClinGen gnomAD |
|
|
CA379163228 rs1344753896 |
112 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA5825555 rs139332352 |
113 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs147898265 CA5825554 |
115 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1249746313 CA379163189 |
119 | S>C | No |
ClinGen gnomAD |
|
|
CA379163188 rs1189217695 |
119 | S>N | No |
ClinGen gnomAD |
|
|
rs769784989 CA5825551 |
120 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA216421282 rs1030599630 |
120 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA379163169 rs1312373084 |
122 | T>I | No |
ClinGen gnomAD |
|
|
CA5825550 rs528336657 |
123 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379163155 rs1590681909 |
125 | S>G | No |
ClinGen Ensembl |
|
|
rs1361333777 CA379163145 |
126 | V>A | No |
ClinGen gnomAD |
|
|
rs377626825 CA5825546 |
126 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377626825 CA5825547 |
126 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778245964 CA5825545 |
127 | V>D | No |
ClinGen ExAC gnomAD |
|
|
CA379163143 rs1287141205 |
127 | V>F | No |
ClinGen gnomAD |
|
|
CA379163132 rs1432612833 |
128 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA379163134 rs1173261173 |
128 | I>T | No |
ClinGen gnomAD |
|
|
rs1391828466 CA379163116 |
131 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA379163111 rs1169121412 |
131 | D>V | No |
ClinGen gnomAD |
|
|
rs748671232 CA5825543 |
133 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA379163075 rs1393668369 |
135 | I>V | No |
ClinGen gnomAD |
|
|
CA216420056 rs367627982 |
136 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA gnomAD |
|
CA379163067 rs1412170930 |
136 | R>H | No |
ClinGen gnomAD |
|
|
CA5825514 rs140729160 |
137 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5825512 rs766495993 |
138 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379163039 rs1273117542 |
141 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1211834706 CA379163038 |
141 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA5825508 rs762218026 |
142 | W>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 142 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs772394968 CA5825509 |
142 | W>G | No |
ClinGen ExAC gnomAD |
|
|
CA379163032 rs772394968 |
142 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA379163024 rs1333743718 |
143 | T>S | No |
ClinGen gnomAD |
|
|
rs1040235267 CA216420001 |
147 | C>Y | No |
ClinGen TOPMed |
|
|
CA5825506 rs749809521 |
148 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825505 rs749809521 |
148 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379162982 rs1480914832 |
149 | L>P | No |
ClinGen TOPMed |
|
| TCGA novel | 151 | P>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5825503 rs770592377 |
151 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA379162969 rs770592377 |
151 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 151 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1564842677 CA379162965 |
152 | G>E | No |
ClinGen Ensembl |
|
|
rs777617011 CA5825501 |
152 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA216419960 rs142011119 |
153 | V>A | No |
ClinGen ESP TOPMed gnomAD |
|
| TCGA novel | 153 | V>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5825500 rs567881413 |
153 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA379162951 rs1451118261 |
155 | L>F | No |
ClinGen gnomAD |
|
|
CA5825498 rs778772139 |
159 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 160 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5825495 rs374835978 |
160 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5825492 rs767788863 |
161 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs750625520 CA5825493 |
161 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825491 rs762164658 |
162 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA216419923 rs1024079623 |
164 | Q>H | No |
ClinGen Ensembl |
|
|
rs1346948695 CA379162872 |
167 | G>A | No |
ClinGen gnomAD |
|
|
rs764538943 CA5825489 |
167 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372071423 CA5825488 |
168 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs34183743 CA5825483 |
175 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs34183743 CA5825484 |
175 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5825481 rs778526206 |
178 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778526206 CA5825482 |
178 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1394898068 CA379162798 |
179 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA379162794 rs1590678723 |
180 | P>S | No |
ClinGen Ensembl |
|
|
CA5825480 rs754834078 |
181 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA379162784 rs749150881 |
182 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825479 rs749150881 |
182 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs887771448 CA216419819 |
182 | K>R | No |
ClinGen Ensembl |
|
|
CA216419811 rs1047746041 |
184 | D>A | No |
ClinGen Ensembl |
|
|
rs756176554 CA5825477 |
185 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1564842546 CA379162739 |
188 | F>Y | No |
ClinGen Ensembl |
|
|
CA216419796 rs1027362630 |
193 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs900262041 CA216419789 |
194 | L>M | No |
ClinGen TOPMed |
|
|
CA379162690 rs1339923262 |
195 | D>G | No |
ClinGen gnomAD |
|
|
CA379162672 rs141603706 |
198 | V>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5825474 rs141603706 |
198 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5825473 rs751836335 |
201 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 206 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs953369507 CA216414449 |
208 | S>N | No |
ClinGen Ensembl |
|
|
rs539611416 CA5825441 |
209 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs539611416 CA5825440 |
209 | V>M | Variant assessed as Somatic; 4.779e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1484394837 CA379162584 |
210 | G>S | No |
ClinGen TOPMed |
|
|
rs1407571915 CA379162566 |
212 | I>M | No |
ClinGen gnomAD |
|
|
rs745771474 CA5825439 |
213 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1000451056 CA216414430 |
220 | Y>H | No |
ClinGen gnomAD |
|
|
CA379162498 rs1429607641 |
223 | F>I | No |
ClinGen TOPMed |
|
|
rs79747973 CA216414407 |
224 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs79747973 CA5825437 |
224 | R>M | No |
ClinGen ExAC gnomAD |
|
|
rs747176946 CA5825436 |
225 | A>S | No |
ClinGen ExAC |
|
|
CA5825435 rs777719897 |
225 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371437453 CA5825433 |
226 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1238419038 CA379162477 |
227 | S>T | No |
ClinGen gnomAD |
|
|
rs1437124392 CA379162470 |
228 | E>A | No |
ClinGen TOPMed |
|
|
rs201316965 CA5825430 |
228 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1295353572 CA379162463 |
229 | S>A | No |
ClinGen TOPMed |
|
|
rs766968103 CA5825429 |
230 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs761229054 CA5825428 |
231 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs773064863 CA5825400 |
232 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs150076578 CA5825399 |
232 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1205876885 CA379162417 |
234 | W>C | No |
ClinGen gnomAD |
|
|
CA379162400 rs1235248867 |
237 | A>T | No |
ClinGen gnomAD |
|
|
CA379162396 rs1356261314 |
237 | A>V | No |
ClinGen gnomAD |
|
|
CA5825395 rs376277544 |
241 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs780419350 CA5825394 |
243 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs373421505 CA5825393 |
243 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs780419350 CA379162367 |
243 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs968774458 CA216403740 |
245 | S>C | No |
ClinGen Ensembl |
|
|
CA5825392 rs746361052 |
246 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379162334 rs1185433901 |
248 | L>R | No |
ClinGen gnomAD |
|
|
rs148060072 CA5825389 |
249 | R>S | No |
ClinGen ESP ExAC TOPMed |
|
|
CA216403731 rs943122218 |
250 | L>V | No |
ClinGen TOPMed |
|
|
rs754576662 CA5825387 |
251 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754576662 CA216403711 |
251 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825386 rs374656353 |
252 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379162316 rs374656353 |
252 | T>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379162310 rs1356821269 |
253 | C>* | No |
ClinGen TOPMed |
|
|
CA5825384 rs200769745 |
253 | C>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5825383 rs200769745 |
253 | C>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5825381 rs147555918 |
255 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5825382 rs147555918 |
255 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1215573196 CA379162300 |
255 | P>S | No |
ClinGen gnomAD |
|
|
rs371411050 CA5825379 |
257 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379162281 rs1465092965 |
258 | D>V | No |
ClinGen Ensembl |
|
|
CA5825377 rs533182190 |
259 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs775617842 CA5825376 |
260 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA5825375 rs770178627 |
260 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1327914472 CA379162267 |
261 | P>T | No |
ClinGen gnomAD |
|
|
rs746282367 CA5825374 |
263 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825373 rs781620132 |
264 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747536667 CA5825371 |
265 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA5825370 rs778354267 |
266 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA5825368 rs375218160 |
267 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379162233 rs375218160 |
267 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379162229 rs1490050628 |
267 | A>V | No |
ClinGen gnomAD |
|
|
CA379162213 rs1196101948 |
270 | S>L | No |
ClinGen gnomAD |
|
|
CA379162215 rs1590659226 |
270 | S>P | No |
ClinGen Ensembl |
|
|
CA5825365 rs372197696 |
271 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5825366 rs372197696 COSM178584 |
271 | S>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA216403492 rs1004763512 |
272 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA379162197 rs1261545649 |
273 | C>S | No |
ClinGen gnomAD |
|
|
CA379162165 COSM428898 rs1351315188 |
278 | S>L | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA379162149 rs1564834256 |
281 | V>A | No |
ClinGen Ensembl |
|
|
CA5825362 rs540833216 |
281 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs898876993 CA216403451 |
282 | H>L | No |
ClinGen TOPMed gnomAD |
|
|
rs898876993 CA379162143 |
282 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1304408156 CA379162131 |
284 | D>A | No |
ClinGen TOPMed |
|
|
rs1385152966 CA379162114 |
286 | D>G | No |
ClinGen gnomAD |
|
|
CA379162098 rs1419452185 |
288 | F>L | No |
ClinGen gnomAD |
|
|
CA5825361 rs748857352 |
289 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA216402954 rs776878132 |
291 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825335 rs761084899 |
292 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA5825336 rs200925008 |
292 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379162060 rs1243579320 |
293 | S>C | No |
ClinGen TOPMed |
|
|
rs200124336 CA5825333 |
294 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1420275013 CA379162047 |
296 | E>Q | No |
ClinGen gnomAD |
|
|
rs779385596 CA5825331 |
297 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA216402884 rs745480803 |
298 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745480803 CA5825329 |
298 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147815943 CA5825328 |
299 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA379162023 rs1414354474 |
299 | A>V | No |
ClinGen TOPMed |
|
|
CA5825327 rs757110476 |
301 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA5825326 rs200695317 |
304 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1273395548 CA379161959 |
308 | N>K | No |
ClinGen gnomAD |
|
|
rs1336398965 CA379161961 |
308 | N>S | No |
ClinGen gnomAD |
|
|
rs1210941900 CA379161963 |
308 | N>Y | No |
ClinGen Ensembl |
|
|
CA5825324 rs758216838 |
309 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA379161952 rs1353844090 |
310 | E>K | No |
ClinGen gnomAD |
|
|
CA379161951 rs1353844090 |
310 | E>Q | No |
ClinGen gnomAD |
|
|
CA379161935 rs1590658182 |
312 | S>A | No |
ClinGen Ensembl |
|
|
rs373907092 CA5825322 |
314 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs760892613 CA5825318 |
315 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs773509897 CA379161913 |
315 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA5825319 rs373156305 |
315 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs142383880 CA5825316 |
316 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA216402822 rs377009308 |
317 | Q>* | No |
ClinGen ESP ExAC gnomAD |
|
|
CA5825315 rs377009308 |
317 | Q>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA5825314 rs774964850 |
317 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs769168642 CA5825313 |
318 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs745432220 CA5825312 |
319 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs890832368 CA216402787 |
320 | S>R | No |
ClinGen Ensembl |
|
|
rs374028974 CA5825311 |
321 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA379161879 rs1469403485 |
321 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA5825310 rs770645345 |
323 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825308 rs777387631 |
325 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147670205 CA5825307 |
326 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 327 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1351932787 CA379161835 |
328 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1351932787 CA379161833 |
328 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1309131185 CA379161823 |
329 | Q>R | No |
ClinGen gnomAD |
|
|
CA5825306 rs748011465 |
332 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs570493262 CA5825305 |
333 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs755007599 CA5825304 |
334 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA5825303 rs753849600 |
335 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs558352799 CA5825302 |
335 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA379161785 rs1359722068 |
336 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA5825300 rs373988366 |
336 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379161783 rs373988366 |
336 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1359722068 CA379161784 |
336 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1190060469 CA379161779 |
337 | V>A | No |
ClinGen gnomAD |
|
|
rs374923847 CA5825298 |
337 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000880666 rs77195727 CA5825295 |
338 | R>P | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA5825296 rs77195727 |
338 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5825297 rs139424841 |
338 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1488808156 CA379161770 |
339 | R>I | No |
ClinGen gnomAD |
|
|
rs1280855950 CA379161766 |
340 | G>R | No |
ClinGen TOPMed |
|
|
CA379161756 rs1326909457 |
341 | T>I | No |
ClinGen TOPMed |
|
|
rs1273528965 CA379161754 |
342 | T>A | No |
ClinGen TOPMed |
|
|
CA379161741 rs1336718677 |
344 | V>M | No |
ClinGen TOPMed |
|
|
rs1285708503 CA379161728 |
345 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA379161702 rs1350610078 |
349 | E>A | No |
ClinGen gnomAD |
|
|
CA5825293 rs770593996 |
350 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1304883400 CA379161697 |
350 | E>K | No |
ClinGen gnomAD |
|
|
rs111469886 CA216402655 |
351 | L>P | No |
ClinGen Ensembl |
|
|
rs1469088793 CA379161673 |
353 | E>D | No |
ClinGen gnomAD |
|
|
rs780018459 CA5825268 |
354 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs146107856 CA5825266 |
356 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA5825265 rs200925187 |
357 | A>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5825264 rs200925187 |
357 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA216399508 rs548985610 |
358 | S>P | No |
ClinGen 1000Genomes gnomAD |
|
|
rs778249269 CA5825262 |
359 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA5825261 rs758881917 |
360 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1256360881 CA379161617 |
361 | E>D | No |
ClinGen gnomAD |
|
|
CA5825259 rs765910962 |
363 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs201450347 CA5825260 |
363 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1311696259 CA379161603 |
364 | S>L | No |
ClinGen gnomAD |
|
|
CA5825258 rs760123427 |
371 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA379161539 rs1445365640 |
372 | W>C | No |
ClinGen gnomAD |
|
|
CA5825257 rs749891136 |
373 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA379161508 rs1399965313 |
377 | Q>H | No |
ClinGen TOPMed |
|
|
rs566594934 CA5825255 |
378 | L>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs566594934 CA5825256 |
378 | L>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM926308 CA5825254 rs141647338 |
379 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA gnomAD |
|
CA379161491 rs1347754672 |
381 | G>D | No |
ClinGen TOPMed |
|
|
rs745812502 CA5825249 |
382 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825252 rs775406226 |
382 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825250 rs551479242 |
382 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5825251 rs775406226 |
382 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825248 rs776727959 |
383 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1215668463 CA379161467 |
385 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA379161468 rs1215668463 |
385 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA5825247 rs368931302 |
386 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5825246 rs747230033 |
386 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825243 rs748457490 |
387 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA379161451 rs1590653276 |
388 | V>G | No |
ClinGen Ensembl |
|
|
CA5825240 rs754334089 |
391 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA5825238 rs756769893 |
391 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825239 rs756769893 |
391 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763806853 CA216399232 |
392 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751212682 CA5825237 |
392 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs573910214 CA216399231 |
393 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825235 rs573910214 CA216399224 |
393 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775213446 CA379161427 |
394 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1396704997 CA379161426 |
394 | L>P | No |
ClinGen TOPMed |
|
|
CA5825234 rs775213446 |
394 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765043900 CA5825233 COSM673804 |
395 | E>G | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA5825232 rs372029383 |
397 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5825231 rs776479428 |
397 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA379161383 rs1266906348 |
401 | N>S | No |
ClinGen gnomAD |
|
|
CA379161375 rs1208339299 |
402 | K>R | No |
ClinGen gnomAD |
|
|
rs1486986738 CA379161369 |
403 | L>F | No |
ClinGen gnomAD |
|
|
CA5825226 rs143909358 |
405 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs143909358 CA5825227 |
405 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs755340635 CA5825224 |
407 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA379161332 rs1330040345 |
408 | Y>* | No |
ClinGen gnomAD |
|
|
rs1383506074 CA379161326 |
409 | H>R | No |
ClinGen gnomAD |
|
|
rs780486148 CA5825221 |
410 | A>T | Variant assessed as Somatic; 0.0001398 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1590653060 CA379161314 |
411 | D>G | No |
ClinGen Ensembl |
|
|
CA5825218 rs763611478 |
414 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 416 | A>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA379160835 rs1356136608 |
417 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs781704899 CA5825183 |
417 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA379160834 rs1356136608 |
417 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs778498184 CA5825181 |
418 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825180 rs778498184 |
418 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379160830 rs1242884717 |
418 | V>L | No |
ClinGen gnomAD |
|
|
rs1475257056 CA379160810 |
421 | D>Y | No |
ClinGen gnomAD |
|
|
rs958489561 CA216394549 |
424 | S>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs552915237 CA5825178 |
424 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs867268261 CA216394542 |
425 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA379160780 rs867268261 |
425 | R>L | No |
ClinGen gnomAD |
|
|
rs1201223222 CA379160768 |
427 | K>E | No |
ClinGen gnomAD |
|
|
CA216394539 rs891431344 |
428 | L>P | No |
ClinGen Ensembl |
|
|
CA5825177 rs371333317 |
428 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756022679 CA379160757 |
429 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756022679 CA5825176 |
429 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs367840281 CA5825175 |
431 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1056810554 CA216394527 |
431 | R>W | No |
ClinGen TOPMed |
|
|
rs757155665 CA216394507 |
432 | W>* | No |
ClinGen Ensembl |
|
|
CA216394511 rs78796735 |
432 | W>G | No |
ClinGen Ensembl |
|
|
rs1176223812 CA379160727 |
434 | L>P | No |
ClinGen gnomAD |
|
|
CA379160722 rs1478765629 |
435 | S>C | No |
ClinGen gnomAD |
|
|
CA379160709 rs1246891400 |
437 | F>S | No |
ClinGen gnomAD |
|
|
CA379160681 rs1289992085 |
441 | P>S | No |
ClinGen gnomAD |
|
|
rs1486104552 CA379160653 |
443 | G>E | No |
ClinGen TOPMed |
|
|
rs1339645215 CA379160655 CA379160656 |
443 | G>R | No |
ClinGen gnomAD |
|
|
CA216393531 rs1029601094 |
445 | K>E | No |
ClinGen gnomAD |
|
|
CA216393529 rs996677989 |
445 | K>N | No |
ClinGen Ensembl |
|
|
rs1450076777 CA379160630 |
446 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1472550139 CA379160628 |
447 | P>A | No |
ClinGen TOPMed |
|
|
COSM2114290 CA216393525 rs138106160 |
447 | P>L | pancreas [Cosmic] | No |
ClinGen cosmic curated ESP TOPMed gnomAD |
|
CA379160629 rs1472550139 |
447 | P>T | No |
ClinGen TOPMed |
|
|
rs1590647289 CA379160613 |
449 | N>T | No |
ClinGen Ensembl |
|
| TCGA novel | 450 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5825146 rs759766388 |
450 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA5825144 rs761055362 |
452 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA5825143 rs761055362 |
452 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs1423306876 CA379160581 |
454 | E>D | No |
ClinGen gnomAD |
|
| TCGA novel | 454 | E>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1590647252 CA379160577 |
455 | T>P | No |
ClinGen Ensembl |
|
|
CA379160571 rs1185145063 |
456 | F>V | No |
ClinGen gnomAD |
|
|
rs564578145 CA216393475 |
457 | R>C | No |
ClinGen gnomAD |
|
|
rs1238613686 CA379160554 |
458 | C>* | No |
ClinGen gnomAD |
|
|
rs1209497079 CA379160546 |
459 | C>W | No |
ClinGen TOPMed gnomAD |
|
|
rs768039988 CA5825141 |
460 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5825142 rs773818269 |
460 | W>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1168316480 CA379160543 |
460 | W>R | No |
ClinGen TOPMed |
|
|
CA379160526 rs1590647183 |
462 | H>P | No |
ClinGen Ensembl |
|
|
rs1053543544 CA216393443 |
463 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA379160518 rs1053543544 |
463 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1337405123 CA379160510 |
464 | Q>H | No |
ClinGen TOPMed |
|
|
rs1293095949 CA379160500 |
466 | D>Y | No |
ClinGen gnomAD |
|
|
rs907431268 COSM1353425 CA216393439 |
468 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA5825139 rs775147478 |
468 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA379160483 rs775147478 |
468 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379160485 rs907431268 |
468 | R>S | No |
ClinGen gnomAD |
|
|
CA216393432 rs529670039 |
469 | T>K | No |
ClinGen 1000Genomes gnomAD |
|
|
rs559230262 CA5825138 |
470 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA379160469 rs1590647087 |
471 | Y>H | No |
ClinGen Ensembl |
|
|
CA5825137 rs370202573 |
472 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379160440 rs1331478028 |
475 | Q>* | No |
ClinGen gnomAD |
|
|
CA5825108 rs755002878 |
477 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379160407 rs1590646031 |
478 | H>P | No |
ClinGen Ensembl |
|
|
rs1590646011 CA379160400 |
479 | H>P | No |
ClinGen Ensembl |
|
|
CA5825105 rs756284238 |
479 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs750856165 CA5825104 |
480 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs750856165 CA379160393 |
480 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA379160392 rs750856165 |
480 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA216392626 rs1024366107 |
480 | P>T | No |
ClinGen gnomAD |
|
|
CA5825101 rs374481137 |
482 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370324105 CA5825099 |
487 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA379160342 rs1488075664 |
488 | S>N | No |
ClinGen TOPMed |
|
|
CA5825098 rs547003210 |
490 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1284173268 COSM3782612 CA379160330 |
490 | R>W | Variant assessed as Somatic; impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs773101925 CA5825095 |
493 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1156983924 CA379160289 |
496 | I>V | No |
ClinGen TOPMed |
|
|
CA379160278 rs1411355861 |
497 | S>I | No |
ClinGen TOPMed |
|
|
rs748106984 CA5825093 |
499 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1470498389 CA379160251 |
501 | T>R | No |
ClinGen gnomAD |
|
|
rs778764948 CA5825092 |
503 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1311239238 CA379160226 |
505 | R>M | No |
ClinGen gnomAD |
|
|
CA5825090 rs749436104 |
506 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1342831788 CA379160211 |
507 | Y>F | No |
ClinGen gnomAD |
|
|
CA216391191 rs1043182688 |
508 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1423198071 CA379159834 |
509 | N>D | No |
ClinGen gnomAD |
|
|
CA379159824 rs1199997778 |
509 | N>K | No |
ClinGen gnomAD |
|
|
CA379159828 rs1240683983 |
509 | N>S | No |
ClinGen gnomAD |
|
|
CA379159810 rs1317705761 |
510 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1453000963 CA379159785 |
512 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
COSM178582 rs867947158 CA216391135 |
513 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
COSM50351 rs753106579 CA5825062 |
513 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs767142123 CA216391106 |
517 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767142123 CA5825058 |
517 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA5825057 rs761440221 |
520 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1328486573 CA379159641 |
522 | T>I | No |
ClinGen gnomAD |
|
|
rs1590643423 CA379159654 |
522 | T>P | No |
ClinGen Ensembl |
|
|
CA379159635 rs1335119657 |
523 | F>L | No |
ClinGen gnomAD |
|
|
rs774179612 CA5825056 |
524 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1219779934 CA379159590 |
526 | R>* | No |
ClinGen TOPMed |
|
|
rs142478721 CA5825054 |
526 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5825053 rs142478721 |
526 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs769927140 CA5825052 |
527 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769927140 CA379159583 |
527 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776762523 CA5825050 |
528 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA216391042 rs889761387 |
528 | E>G | No |
ClinGen Ensembl |
|
|
rs771331825 CA5825049 |
529 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs747204940 CA5825048 |
531 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs747204940 CA379159515 |
531 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1158549759 CA379159503 |
532 | L>F | No |
ClinGen gnomAD |
|
|
rs569160467 CA216391008 |
534 | M>I | No |
ClinGen 1000Genomes |
|
|
rs1247830102 CA379159480 |
534 | M>V | No |
ClinGen TOPMed |
|
|
rs1000898046 CA216391003 |
536 | Y>C | No |
ClinGen Ensembl |
|
|
CA5825045 rs748703420 |
537 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs772518031 CA5825046 |
537 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777337608 CA5825019 |
541 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA5825017 rs752487618 |
542 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA5825018 rs758059874 |
542 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA5825016 rs371388130 |
544 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5825015 rs151056884 |
546 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA5825012 rs557617967 |
550 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772479316 CA5825010 |
552 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA379158008 rs1335535531 |
552 | G>R | No |
ClinGen gnomAD |
|
|
rs772479316 CA379158005 |
552 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA379158002 rs1564822679 |
553 | G>W | No |
ClinGen Ensembl |
|
|
rs536080242 CA379157972 |
557 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA379157968 rs1369750760 |
558 | E>A | No |
ClinGen Ensembl |
|
|
CA5825008 rs774617578 |
558 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA5825007 rs749778631 |
560 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs921245505 CA216386580 |
560 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA5825006 rs749778631 |
560 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA5825004 rs770427335 |
564 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs142826348 CA216386557 |
566 | A>T | No |
ClinGen ESP |
|
|
CA379157906 rs1435911161 |
567 | Q>R | No |
ClinGen TOPMed |
|
|
CA379157893 rs1227142979 |
569 | E>A | No |
ClinGen TOPMed |
|
|
CA216386541 rs894637866 |
569 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs894637866 CA379157896 |
569 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA5825003 rs746584551 |
571 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379157872 rs1460137811 |
572 | L>F | No |
ClinGen gnomAD |
|
|
rs1204922124 CA379157863 |
573 | K>R | No |
ClinGen gnomAD |
|
|
rs757301069 CA5824975 |
575 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA5824976 rs767514582 |
575 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775876459 CA5824971 |
577 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA5824972 rs763145712 |
577 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5824973 rs763145712 |
577 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379157825 rs1301349954 |
578 | G>C | No |
ClinGen Ensembl |
|
|
CA5824970 rs765550978 |
578 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 578 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760060935 CA5824969 |
579 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA379157810 rs1237770123 |
580 | T>N | No |
ClinGen gnomAD |
|
|
CA379157804 rs1590632838 |
581 | S>N | No |
ClinGen Ensembl |
|
|
rs1043795419 CA216386104 |
583 | N>D | No |
ClinGen Ensembl |
|
|
rs761453399 CA5824966 |
583 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA379157778 rs1346493558 |
585 | I>L | No |
ClinGen gnomAD |
|
|
rs1260891585 CA379157772 |
585 | I>M | No |
ClinGen Ensembl |
|
|
CA5824965 rs773721471 |
586 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs768403377 CA5824964 |
586 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs981633669 CA216386082 |
588 | K>E | No |
ClinGen TOPMed |
|
|
rs370968162 CA5824962 |
588 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs576108739 CA5824961 |
590 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755371968 CA5824959 |
591 | S>L | Variant assessed as Somatic; 0.001038 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1178442548 CA379157742 |
591 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA5824957 rs751715668 |
593 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379157732 rs1197029862 |
593 | E>K | No |
ClinGen gnomAD |
|
|
CA379157724 rs1159474388 |
594 | E>Q | No |
ClinGen TOPMed |
|
| TCGA novel | 596 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5824955 rs140160487 |
597 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5824954 rs140160487 |
597 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5824952 rs759830357 |
598 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA379157689 rs1350456833 |
600 | S>G | No |
ClinGen TOPMed |
|
|
CA379157686 rs969553433 |
600 | S>N | No |
ClinGen gnomAD |
|
|
rs969553433 CA216386033 |
600 | S>T | No |
ClinGen gnomAD |
|
|
rs766968163 CA5824950 |
602 | H>R | No |
ClinGen ExAC |
|
|
CA379157637 rs1443524635 |
605 | R>K | No |
ClinGen gnomAD |
|
|
CA5824919 rs146135257 |
605 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771994577 CA5824920 |
605 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778943099 CA5824918 |
606 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778943099 CA379157634 |
606 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5824916 rs780486840 |
607 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5824915 rs780486840 |
607 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1590632435 CA379157622 |
608 | F>V | No |
ClinGen Ensembl |
|
|
rs1181603887 CA379157603 |
610 | K>N | No |
ClinGen TOPMed |
|
|
rs756375919 CA5824914 |
612 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs750944029 CA5824913 |
613 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA5824912 rs768202474 |
614 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA5824910 rs752302699 |
614 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1444554435 CA379157573 |
615 | G>E | No |
ClinGen gnomAD |
|
|
CA5824909 COSM1734192 rs764806036 |
615 | G>R | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs776092129 CA216385858 |
618 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1327929633 CA379157554 |
618 | A>T | No |
ClinGen gnomAD |
|
|
rs776092129 CA5824907 |
618 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760457132 CA379157549 |
619 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760457132 CA5824905 |
619 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA216385842 rs962092429 |
621 | W>G | No |
ClinGen Ensembl |
|
|
CA5824904 rs772979791 |
622 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs748047938 CA5824902 |
623 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs772048119 CA5824903 |
623 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1362930204 CA379157520 |
624 | S>G | No |
ClinGen gnomAD |
|
|
rs539942067 CA379157513 |
624 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5824898 rs199782698 |
625 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA216385774 rs866421233 |
626 | E>K | No |
ClinGen Ensembl |
|
|
rs1271517604 CA379157496 |
627 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1271517604 CA379157495 |
627 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
CA5824897 rs756351120 |
628 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA5824896 rs139881025 |
628 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139881025 CA379157491 |
628 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379157494 rs756351120 |
628 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA379157490 rs1289615353 |
629 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA5824895 rs375468420 |
630 | Q>H | No |
ClinGen ESP ExAC gnomAD |
|
|
rs757876745 CA5824894 |
631 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA5824893 rs752067625 |
632 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA5824891 rs754383227 |
633 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1347110156 CA379157465 |
633 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA216385732 rs1021408824 |
636 | T>A | No |
ClinGen Ensembl |
|
|
rs776822713 CA216385729 |
636 | T>M | No |
ClinGen TOPMed |
|
|
CA379157436 rs1393109677 |
637 | V>A | No |
ClinGen gnomAD |
|
|
CA379157435 rs1393109677 |
637 | V>G | No |
ClinGen gnomAD |
|
|
CA5824889 rs536033266 |
638 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5824887 rs750260206 |
639 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
CA5824886 rs767261460 |
640 | E>V | No |
ClinGen ExAC gnomAD |
|
|
COSM926305 rs372329762 CA5824885 |
643 | T>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs148408625 CA5824883 |
644 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs374824031 CA5824880 COSM687548 |
648 | E>* | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA5824878 rs374205061 |
648 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1383215363 CA379157369 |
648 | E>G | No |
ClinGen TOPMed |
|
|
CA5824879 rs374824031 |
648 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs374824031 CA379157371 |
648 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5824848 rs750078222 |
652 | Q>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 653 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs780888007 CA5824847 |
654 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379157024 rs1446568831 |
657 | A>T | No |
ClinGen gnomAD |
|
|
rs1243848175 CA379157009 |
658 | I>V | No |
ClinGen gnomAD |
|
|
CA379156988 rs1183178832 |
659 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA379156991 rs1183178832 |
659 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs756889259 CA5824846 |
660 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1384663599 CA379156951 |
661 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA379156921 rs1306844309 |
662 | D>E | No |
ClinGen gnomAD |
|
|
CA5824843 rs758296373 |
662 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1272440758 CA379156919 |
663 | Q>K | No |
ClinGen gnomAD |
|
|
rs202060493 CA216385282 |
663 | Q>R | No |
ClinGen 1000Genomes |
|
|
CA5824842 rs752628944 |
665 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs759759875 CA5824841 |
665 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA379156861 rs1313783444 |
666 | A>V | No |
ClinGen gnomAD |
|
|
rs1226195786 CA379156842 |
667 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1023727003 CA216385277 |
668 | Q>E | No |
ClinGen Ensembl |
|
|
CA5824838 rs200214563 |
669 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379156784 rs1354437542 |
670 | K>N | No |
ClinGen gnomAD |
|
|
rs760948923 CA5824837 |
671 | F>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379156765 rs1427144874 |
672 | A>T | No |
ClinGen gnomAD |
|
|
CA5824836 rs559146402 |
674 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA379156709 rs1163020622 |
675 | E>G | No |
ClinGen gnomAD |
|
|
CA379156719 rs1285431175 |
675 | E>K | No |
ClinGen TOPMed |
|
|
CA5824835 rs772435122 |
676 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379156675 rs930734353 |
678 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs748614515 CA5824834 |
678 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA216385271 rs930734353 |
678 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1224584242 CA379156660 |
679 | Q>* | No |
ClinGen gnomAD |
|
|
rs35733103 CA5824832 |
680 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5824833 rs774854189 |
680 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA379156629 rs1590631182 |
681 | A>D | No |
ClinGen Ensembl |
|
|
rs577101378 CA5824831 |
682 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5824830 rs138921217 |
682 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138921217 CA5824829 |
682 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375478360 CA379156583 |
684 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5824827 COSM1218926 rs375478360 |
684 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
COSM926304 CA5824828 rs746630605 |
684 | R>W | Variant assessed as Somatic; 5.771e-05 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1158002740 CA379156549 |
686 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs752434080 CA5824825 |
686 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA379156544 rs1446842180 |
687 | S>R | No |
ClinGen gnomAD |
|
|
rs1244181983 CA379156518 |
688 | L>F | No |
ClinGen gnomAD |
|
|
rs1407230793 CA379156515 |
688 | L>P | No |
ClinGen gnomAD |
|
|
rs1305170275 CA379156508 |
689 | M>K | No |
ClinGen TOPMed |
|
|
rs1302624840 CA379156511 |
689 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1302624840 CA379156512 |
689 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA379156496 rs1456493117 |
690 | P>S | No |
ClinGen gnomAD |
|
|
rs1590631086 CA379156480 |
691 | W>G | No |
ClinGen Ensembl |
|
|
CA379156433 rs1418756849 |
693 | P>L | No |
ClinGen gnomAD |
|
|
rs1160042835 CA379156442 |
693 | P>T | No |
ClinGen gnomAD |
|
|
rs766527329 CA379156407 |
694 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773427798 CA5824819 |
697 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA379156360 rs773427798 |
697 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA379156319 rs1486531371 |
700 | P>T | No |
ClinGen gnomAD |
|
|
CA5824817 rs146057137 |
701 | I>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379156304 rs146057137 |
701 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1360601046 CA379156286 |
702 | T>A | No |
ClinGen TOPMed |
|
|
rs777803242 CA5824816 |
702 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379156223 rs1289105951 |
705 | W>* | No |
ClinGen TOPMed |
|
|
rs1326656344 CA379156186 |
707 | Y>H | No |
ClinGen gnomAD |
|
|
rs1450735617 CA379156169 |
708 | R>* | No |
ClinGen TOPMed |
|
|
rs202210331 CA379156165 |
708 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs202210331 CA216385145 |
708 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5824815 rs202210331 |
708 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs776146202 CA379156150 CA216385139 |
709 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5824814 rs575700015 |
709 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5824812 rs770375927 |
710 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5824799 rs767837222 |
712 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 713 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1460604110 CA379155978 |
714 | P>H | No |
ClinGen gnomAD |
|
|
CA379155981 rs1183781025 |
714 | P>S | No |
ClinGen gnomAD |
|
|
rs143610110 CA5824798 |
715 | W>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379155957 rs1199160356 |
715 | W>C | No |
ClinGen gnomAD |
|
|
rs751956572 CA379155949 |
716 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs751956572 CA216384926 |
716 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA5824797 rs751956572 |
716 | D>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1252453778 CA379155927 |
717 | P>A | No |
ClinGen gnomAD |
|
|
CA379155922 rs1303375469 |
717 | P>R | No |
ClinGen TOPMed |
|
|
rs1252453778 CA379155925 |
717 | P>S | No |
ClinGen gnomAD |
|
|
rs764398770 CA5824796 |
720 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1246912113 CA379155848 |
722 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1331943181 CA379155836 |
723 | Q>E | No |
ClinGen gnomAD |
|
|
CA216384885 rs970319525 |
723 | Q>R | No |
ClinGen TOPMed |
|
|
CA5824791 rs771801579 |
727 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760292668 CA5824792 |
727 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA5824789 rs138015375 |
728 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138015375 CA216384877 |
728 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1446617132 CA379155722 |
729 | I>F | No |
ClinGen gnomAD |
|
|
rs768514846 CA5824787 |
731 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778874744 CA5824788 |
731 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA379155678 rs1261178904 |
732 | T>P | No |
ClinGen gnomAD |
|
|
CA5824785 rs780205096 |
734 | Q>E | No |
ClinGen ExAC |
|
|
rs1292734289 CA379155638 |
734 | Q>R | No |
ClinGen TOPMed |
|
| TCGA novel | 735 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA379155605 rs1185832055 |
736 | E>K | No |
ClinGen gnomAD |
|
|
CA5824783 rs750564557 |
736 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA5824782 rs781101351 |
737 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs751727731 CA5824780 |
738 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5824779 rs764453800 |
739 | A>G | No |
ClinGen ExAC |
|
|
rs151250529 CA5824778 |
740 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs151250529 CA379155540 |
740 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5824777 rs374070869 |
740 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA379155529 rs374070869 |
740 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs151250529 CA379155538 |
740 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV000889688 rs141858255 CA5824776 |
742 | T>I | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA5824774 rs772814832 |
743 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs771435217 CA5824773 |
744 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379155468 rs1295873900 |
744 | F>S | No |
ClinGen gnomAD |
|
|
rs1011740489 CA216384791 |
746 | G>R | No |
ClinGen Ensembl |
|
|
rs1009655528 CA216384783 |
747 | S>C | No |
ClinGen TOPMed |
|
|
rs892721622 CA216384782 |
747 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA379155410 rs1564820754 |
748 | P>A | No |
ClinGen Ensembl |
|
|
rs774082217 CA5824771 |
749 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379155396 rs1404288375 |
749 | G>R | No |
ClinGen gnomAD |
|
|
CA379155377 rs1316830400 |
750 | P>S | No |
ClinGen TOPMed |
|
|
CA379155364 rs1159895201 |
751 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs371190248 CA5824770 |
751 | R>T | No |
ClinGen ESP ExAC gnomAD |
|
|
CA379155340 rs1564820713 |
752 | H>R | No |
ClinGen Ensembl |
|
|
rs749151635 CA5824769 |
752 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA5824766 rs374457287 |
753 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5824767 rs374457287 |
753 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1316937480 CA379155264 |
756 | G>D | No |
ClinGen gnomAD |
|
|
rs747142054 CA5824745 |
756 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA379155252 rs146629770 |
758 | D>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5824744 rs146629770 |
758 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379155244 rs1454276425 |
759 | Q>R | No |
ClinGen gnomAD |
|
|
rs377167443 CA5824742 |
760 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5824743 rs758650757 |
760 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779353532 CA5824741 |
762 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs755234496 CA5824740 |
762 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs756665101 CA5824737 |
764 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs766856150 CA5824738 |
764 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA5824735 rs763652979 |
765 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs774946959 CA5824733 |
765 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765083686 CA5824732 COSM1475365 |
766 | D>N | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA379155181 rs199552862 |
770 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs199552862 CA5824730 |
770 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5824729 rs770897103 |
772 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA216383396 rs943681773 |
773 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA379155159 rs746909522 |
773 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA5824728 rs746909522 |
773 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
VAR_020414 rs2277301 CA5824727 |
774 | A>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA5824725 rs567473949 |
775 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5824721 rs537805677 |
779 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed |
|
|
CA379155110 rs1166852863 |
781 | T>A | No |
ClinGen gnomAD |
|
|
CA5824717 rs201017802 |
781 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA216383334 rs967901396 |
783 | E>K | No |
ClinGen TOPMed |
|
|
rs764853697 CA5824714 |
790 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA379155051 rs1471659961 |
790 | D>Y | No |
ClinGen gnomAD |
|
|
rs75344555 CA5824712 |
791 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA216383313 rs868793937 |
794 | D>E | No |
ClinGen Ensembl |
|
|
rs766113903 CA5824710 |
795 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5824709 rs760619077 |
797 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs1433534496 CA379154995 |
798 | V>I | No |
ClinGen TOPMed |
|
|
rs959253772 CA216383285 |
799 | P>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 800 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758524305 CA379154965 |
801 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA216382885 rs758524305 |
801 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs775787988 CA5824681 |
802 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763094116 CA5824682 |
802 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA216382862 rs369984713 |
803 | S>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs770136127 CA216382853 |
804 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs770136127 CA5824680 |
804 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA5824679 rs746291168 |
806 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1313357616 CA379154934 |
806 | P>S | No |
ClinGen gnomAD |
|
|
rs149906470 CA5824677 |
807 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5824676 rs149906470 |
807 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM39539 rs377293459 CA5824678 |
807 | R>W | large_intestine central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA379154928 rs1590626489 |
808 | C>G | No |
ClinGen Ensembl |
|
|
rs1337533902 CA379154925 |
808 | C>Y | No |
ClinGen TOPMed |
|
|
CA379154919 rs1434690187 |
809 | R>G | No |
ClinGen gnomAD |
|
|
CA379154916 rs1441970333 |
809 | R>K | No |
ClinGen gnomAD |
|
|
CA379154897 rs1590626432 |
812 | A>T | No |
ClinGen Ensembl |
|
|
rs767854463 CA5824673 |
812 | A>V | Variant assessed as Somatic; 6.377e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs549339222 CA5824670 |
813 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5824671 COSM1218923 rs755744640 |
813 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA5824668 rs367895102 |
814 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs34527841 CA5824669 |
814 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 815 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA216382799 rs186532188 |
817 | A>P | No |
ClinGen Ensembl |
|
|
rs1483848098 CA379154869 COSM1218927 |
817 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA379154857 CA216382796 rs573151125 |
819 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5824665 rs371734500 |
820 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1353422 CA5824664 rs371734500 |
820 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs765603632 CA5824663 |
821 | A>P | No |
ClinGen ExAC |
|
|
rs1227879264 CA379154837 |
823 | L>F | No |
ClinGen gnomAD |
|
|
CA379154836 rs1227879264 |
823 | L>V | No |
ClinGen gnomAD |
|
|
CA379154829 rs1314565730 |
824 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1314565730 CA379154828 |
824 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA216382787 rs939960009 |
824 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs759794463 CA5824662 |
826 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs79341757 CA5824661 |
826 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA216382779 rs867677084 |
827 | E>* | No |
ClinGen Ensembl |
|
|
rs1300967460 CA379154806 |
828 | A>V | No |
ClinGen gnomAD |
|
|
CA5824659 rs747475942 |
829 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA5824658 rs773840428 |
830 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA216382772 rs865894715 |
831 | E>D | No |
ClinGen Ensembl |
|
|
CA5824657 rs772448505 |
832 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs1590624359 CA379154746 |
835 | H>P | No |
ClinGen Ensembl |
|
|
rs1292119716 CA379154747 |
835 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs765360153 CA5824646 |
836 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759853425 CA5824645 |
837 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA5824643 rs376075340 |
839 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5824642 rs376075340 |
839 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA379154707 rs1287595345 |
841 | S>R | No |
ClinGen gnomAD |
|
|
CA5824641 rs371795866 |
843 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5824640 rs541744828 |
843 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5824637 rs368266909 |
845 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368266909 CA5824636 |
845 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150730024 CA5824638 COSM466727 |
845 | R>W | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs770476441 CA5824634 |
846 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs746868098 CA379154679 |
847 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746868098 CA5824633 |
847 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1367569469 CA379154669 |
849 | A>T | No |
ClinGen TOPMed |
|
|
CA5824632 COSM3787043 rs546408517 |
850 | P>L | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA379154660 rs546408517 |
850 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 853 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA379154643 rs1345850913 |
853 | G>D | No |
ClinGen TOPMed |
|
|
CA379154644 rs1378394135 |
853 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA5824630 rs752625917 |
854 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA379154299 rs752625917 |
854 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA5824628 rs755175973 |
856 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs1465149937 CA379154269 |
858 | P>L | No |
ClinGen gnomAD |
|
|
rs766677689 CA5824626 |
859 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs766677689 COSM398670 CA379154268 |
859 | R>G | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs760780682 CA5824625 |
859 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs886227910 CA216381822 |
861 | W>C | No |
ClinGen Ensembl |
|
|
rs767817544 CA5824622 |
861 | W>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1231946858 CA379154249 |
862 | F>Y | No |
ClinGen gnomAD |
|
|
CA5824619 rs769143190 |
864 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5824618 rs759104300 |
865 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs550331772 CA5824617 |
866 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs550331772 CA5824616 |
866 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1478758581 CA379154214 |
868 | L>V | No |
ClinGen TOPMed |
|
|
rs746601067 CA379154210 |
869 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5824615 rs746601067 |
869 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5824614 rs777638746 |
869 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1161042281 CA379154201 |
870 | C>F | No |
ClinGen TOPMed |
|
|
CA5824611 rs779052682 |
871 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA379154163 rs1386244787 |
876 | H>N | No |
ClinGen TOPMed |
|
|
CA5824610 rs754947004 |
877 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs796240042 CA216381768 |
879 | K>E | No |
ClinGen Ensembl |
|
|
rs1465527722 CA379154141 |
879 | K>R | No |
ClinGen gnomAD |
No associated diseases with Q9H0X9
Functions
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| endoplasmic reticulum-plasma membrane contact site | A contact site between the endoplasmic reticulum membrane and the plasma membrane, structured by bridging complexes. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
8 GO annotations of molecular function
| Name | Definition |
|---|---|
| cholesterol binding | Binding to cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. |
| oxysterol binding | Binding to oxysterol, an oxidized form of cholesterol. |
| phosphatidylinositol-4-phosphate binding | Binding to phosphatidylinositol-4-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 4' position. |
| phosphatidylserine binding | Binding to phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine. |
| phosphatidylserine transfer activity | Removes phosphatidylserine from the outer leaflet of a donor membrane, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to the outer leaflet of an acceptor membrane. |
| phospholipid transporter activity | Enables the directed movement of phospholipids into, out of or within a cell, or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester. |
| sterol binding | Binding to a sterol, a steroid containing a hydroxy group in the 3 position, closely related to cholestan-3-ol. |
| sterol transporter activity | Enables the directed movement of sterols into, out of or within a cell, or between cells. Sterol are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule. |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| cholesterol metabolic process | The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues. |
| cholesterol transport | The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| Golgi to plasma membrane transport | The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis. |
| phosphatidylserine acyl-chain remodeling | Remodeling the acyl chains of phosphatidylserine, through sequential deacylation and re-acylation reactions, to generate phosphatidylserine containing different types of fatty acid acyl chains. |
| phospholipid transport | The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester. |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9BZF1 | OSBPL8 | Oxysterol-binding protein-related protein 8 | Homo sapiens (Human) | PR |
| Q969R2 | OSBP2 | Oxysterol-binding protein 2 | Homo sapiens (Human) | PR |
| Q9H1P3 | OSBPL2 | Oxysterol-binding protein-related protein 2 | Homo sapiens (Human) | PR |
| P22059 | OSBP | Oxysterol-binding protein 1 | Homo sapiens (Human) | PR |
| B9EJ86 | Osbpl8 | Oxysterol-binding protein-related protein 8 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKEEAFLRRR | FSLCPPSSTP | QKVDPRKLTR | NLLLSGDNEL | YPLSPGKDME | PNGPSLPRDE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| GPPTPSSATK | VPPAEYRLCN | GSDKECVSPT | ARVTKKETLK | AQKENYRQEK | KRATRQLLSA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LTDPSVVIMA | DSLKIRGTLK | SWTKLWCVLK | PGVLLIYKTP | KVGQWVGTVL | LHCCELIERP |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SKKDGFCFKL | FHPLDQSVWA | VKGPKGESVG | SITQPLPSSY | LIFRAASESD | GRCWLDALEL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| ALRCSSLLRL | GTCKPGRDGE | PGTSPDASPS | SLCGLPASAT | VHPDQDLFPL | NGSSLENDAF |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SDKSERENPE | ESDTETQDHS | RKTESGSDQS | ETPGAPVRRG | TTYVEQVQEE | LGELGEASQV |
| 370 | 380 | 390 | 400 | 410 | 420 |
| ETVSEENKSL | MWTLLKQLRP | GMDLSRVVLP | TFVLEPRSFL | NKLSDYYYHA | DLLSRAAVEE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| DAYSRMKLVL | RWYLSGFYKK | PKGIKKPYNP | ILGETFRCCW | FHPQTDSRTF | YIAEQVSHHP |
| 490 | 500 | 510 | 520 | 530 | 540 |
| PVSAFHVSNR | KDGFCISGSI | TAKSRFYGNS | LSALLDGKAT | LTFLNRAEDY | TLTMPYAHCK |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GILYGTMTLE | LGGKVTIECA | KNNFQAQLEF | KLKPFFGGST | SINQISGKIT | SGEEVLASLS |
| 610 | 620 | 630 | 640 | 650 | 660 |
| GHWDRDVFIK | EEGSGSSALF | WTPSGEVRRQ | RLRQHTVPLE | EQTELESERL | WQHVTRAISK |
| 670 | 680 | 690 | 700 | 710 | 720 |
| GDQHRATQEK | FALEEAQRQR | ARERQESLMP | WKPQLFHLDP | ITQEWHYRYE | DHSPWDPLKD |
| 730 | 740 | 750 | 760 | 770 | 780 |
| IAQFEQDGIL | RTLQQEAVAR | QTTFLGSPGP | RHERSGPDQR | LRKASDQPSG | HSQATESSGS |
| 790 | 800 | 810 | 820 | 830 | 840 |
| TPESCPELSD | EEQDGDFVPG | GESPCPRCRK | EARRLQALHE | AILSIREAQQ | ELHRHLSAML |
| 850 | 860 | 870 | |||
| SSTARAAQAP | TPGLLQSPRS | WFLLCVFLAC | QLFINHILK |