Q6QGC0
Gene name |
PDLIM3 |
Protein name |
PDZ and LIM domain protein 3 |
Names |
Actinin-associated LIM protein, Alpha-actinin-2-associated LIM protein |
Species |
Sus scrofa (Pig) |
KEGG Pathway |
ssc:414421 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q6QGC0
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q6QGC0-F1 | Predicted | AlphaFoldDB |
8 variants for Q6QGC0
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| rs695927802 | 83 | A>T | No | EVA | |
| rs713391742 | 88 | W>L | No | EVA | |
| rs787842979 | 147 | R>C | No | EVA | |
| rs80989310 | 180 | L>V | No | EVA | |
| rs708431587 | 228 | V>M | No | EVA | |
| rs322071455 | 268 | R>S | No | EVA | |
| rs790325525 | 269 | P>A | No | EVA | |
| rs324667100 | 311 | D>E | No | EVA |
No associated diseases with Q6QGC0
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| adherens junction | A cell-cell junction composed of the epithelial cadherin-catenin complex. The epithelial cadherins, or E-cadherins, of each interacting cell extend through the plasma membrane into the extracellular space and bind to each other. The E-cadherins bind to catenins on the cytoplasmic side of the membrane, where the E-cadherin-catenin complex binds to cytoskeletal components and regulatory and signaling molecules. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| filamentous actin | A two-stranded helical polymer of the protein actin. |
| stress fiber | A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber. |
| Z disc | Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| actin binding | Binding to monomeric or multimeric forms of actin, including actin filaments. |
| metal ion binding | Binding to a metal ion. |
| muscle alpha-actinin binding | Binding to muscle isoforms of actinin. Muscle alpha-actinin isoforms are found in skeletal and cardiac muscle and are localized to the Z-disc. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| actin cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. |
| heart development | The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. |
| muscle structure development | The progression of a muscle structure over time, from its formation to its mature state. Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms. |
10 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q3SYZ8 | PDLIM3 | PDZ and LIM domain protein 3 | Bos taurus (Bovine) | PR |
| P49024 | PXN | Paxillin | Gallus gallus (Chicken) | PR |
| Q9PU47 | PDLIM3 | PDZ and LIM domain protein 3 | Gallus gallus (Chicken) | PR |
| P49023 | PXN | Paxillin | Homo sapiens (Human) | PR |
| O43294 | TGFB1I1 | Transforming growth factor beta-1-induced transcript 1 protein | Homo sapiens (Human) | PR |
| Q53GG5 | PDLIM3 | PDZ and LIM domain protein 3 | Homo sapiens (Human) | PR |
| Q62219 | Tgfb1i1 | Transforming growth factor beta-1-induced transcript 1 protein | Mus musculus (Mouse) | PR |
| Q8VI36 | Pxn | Paxillin | Mus musculus (Mouse) | PR |
| O70209 | Pdlim3 | PDZ and LIM domain protein 3 | Mus musculus (Mouse) | PR |
| Q66H76 | Pxn | Paxillin | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MPQNVILPGP | APWGFRLSGG | IDFNQPLIIT | RITPGSKAAA | ANLCPGDVIL | AIDGYGTESM |
| 70 | 80 | 90 | 100 | 110 | 120 |
| THADAQDRIK | AAAHQLCLKI | DRAETRLWSP | QVTEDGKAHP | FKINLESEPQ | DVNYFEHKHN |
| 130 | 140 | 150 | 160 | 170 | 180 |
| IRPKPFIIPG | RSSGCSTPSG | IDGGSGRSTP | SSVSTLSTIC | PGDLKVAAKM | APNIPLEMEL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| PGVKIVHAQF | NTPMQLYSDD | NIMETLQGQV | STALGETPSM | SEPTTASVPP | QSDVYRMLHD |
| 250 | 260 | 270 | 280 | 290 | 300 |
| NRNEPTQPRQ | SGSFRVLQEL | VNDGPDDRPA | GTRSVRAPVT | KIHGGAGGTQ | KMPLCDKCGS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| GIVGAVVKAR | DKYRHPECFV | CADCNLNLKQ | KGYFFVEGEL | YCETHARARM | RPPEGYDTVT |
| LYPKA |