P37173
Gene name |
TGFBR2 |
Protein name |
TGF-beta receptor type-2 |
Names |
TGFR-2, TGF-beta type II receptor, Transforming growth factor-beta receptor type II, TGF-beta receptor type II, TbetaR-II |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:7048 |
EC number |
2.7.11.30: Protein-serine/threonine kinases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
396-423 (Activation loop from InterPro)
Target domain |
244-544 (Protein kinase domain) |
Relief mechanism |
|
Assay |
|
Autoinhibited structure
Activated structure
16 structures for P37173
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 1KTZ | X-ray | 215 A | B | 38-159 | PDB |
| 1M9Z | X-ray | 105 A | A | 49-159 | PDB |
| 1PLO | NMR | - | A | 38-159 | PDB |
| 2PJY | X-ray | 300 A | B | 42-149 | PDB |
| 3KFD | X-ray | 300 A | E/F/G/H | 38-153 | PDB |
| 4P7U | X-ray | 150 A | A | 49-159 | PDB |
| 4XJJ | X-ray | 140 A | A | 50-159 | PDB |
| 5E8V | X-ray | 169 A | A | 237-549 | PDB |
| 5E8Y | X-ray | 205 A | A | 237-549 | PDB |
| 5E91 | X-ray | 242 A | A | 237-549 | PDB |
| 5E92 | X-ray | 208 A | A | 237-549 | PDB |
| 5QIN | X-ray | 157 A | A | 237-549 | PDB |
| 5TX4 | X-ray | 188 A | A | 38-153 | PDB |
| 5TY4 | EM | 290 A | A | 47-149 | PDB |
| 7DV6 | X-ray | 239 A | A | 237-549 | PDB |
| AF-P37173-F1 | Predicted | AlphaFoldDB |
572 variants for P37173
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs933114782 RCV001179694 RCV002483977 |
1 | M>V | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000234528 RCV001526891 CA049102 RCV002259326 rs565502802 |
2 | G>C | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001182181 rs780267559 CA050077 |
3 | R>Q | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1559443652 RCV000686255 |
9 | L>missing | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1182907194 CA351830539 RCV000774425 |
15 | V>F | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1182907194 RCV001183678 |
15 | V>I | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001181441 CA351830566 rs763085648 |
19 | R>H | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1697933766 RCV001179663 |
20 | I>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
CA049553 RCV001561186 rs767407566 RCV001186676 |
22 | S>C | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs764160271 CA049857 RCV002505641 RCV001064639 |
26 | P>S | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001184599 rs984098699 |
35 | D>H | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001180518 rs984098699 CA71499877 |
35 | D>N | Variant assessed as Somatic; 0.0 impact. Familial thoracic aortic aneurysm and aortic dissection [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
rs17025864 RCV001001059 RCV000242516 VAR_020510 CA045593 RCV000828695 |
36 | M>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA045863 rs146277116 RCV002478859 RCV000780774 RCV000227430 |
39 | T>N | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000726916 CA045832 rs780280433 RCV001182793 |
39 | T>S | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA351806358 rs1305653433 RCV001178724 |
42 | N>S | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001185887 rs1553627148 |
46 | K>E | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1698701049 RCV001036839 |
50 | L>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1559456531 CA351806411 RCV000699100 |
51 | C>R | Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
rs1559456557 RCV000688192 CA351806469 |
59 | S>P | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA351806500 rs1432089303 RCV001182544 |
63 | N>S | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000459768 rs1060501985 CA16611309 |
68 | M>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA16611209 rs764941621 RCV000472675 RCV002489048 |
72 | S>N | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1559458806 RCV000773917 CA351806713 |
91 | N>T | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001179241 rs766473954 CA047882 COSM3940481 |
93 | E>K | Variant assessed as Somatic; 0.0 impact. oesophagus Familial thoracic aortic aneurysm and aortic dissection [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
CA351806742 RCV001347965 rs1242885838 |
95 | I>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs777472799 RCV001296250 |
102 | H>R | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002223764 RCV000030550 rs193922665 CA020765 RCV001179055 |
104 | P>S | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001179509 rs1698856374 |
107 | P>T | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs778838598 RCV001183086 CA047987 |
109 | H>D | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV002491568 rs771551560 RCV001190092 CA048033 |
114 | E>Q | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA048054 RCV001185125 rs540920930 |
118 | S>P | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000380176 RCV000766907 rs768385200 RCV000323333 RCV000198358 RCV000253449 CA048064 |
123 | M>L | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection Marfan syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001187433 rs776374040 |
124 | K>T | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001702809 RCV001001460 rs79375991 RCV000559144 RCV000680445 |
128 | K>missing | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs79375991 RCV002487827 RCV000819936 |
129 | P>missing | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001308328 CA048140 rs770216059 |
129 | P>A | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1698859109 RCV001175807 |
130 | G>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs146497045 CA048207 RCV000654796 |
132 | T>A | Variant assessed as Somatic; 0.0 impact. Familial thoracic aortic aneurysm and aortic dissection [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA351806995 RCV001191221 rs1402755105 |
132 | T>I | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000471319 RCV000509415 CA320296 rs863223838 RCV000195915 RCV002478686 |
138 | C>G | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 Congenital aneurysm of ascending aorta [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV003224428 RCV000768108 CA351807036 rs1559458957 |
138 | C>Y | Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA351807122 rs1346274891 RCV000537553 |
150 | S>P | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV002279701 CA048331 RCV001002414 rs757051948 RCV001052704 |
151 | E>V | Ehlers-Danlos syndrome Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000200587 RCV002517188 CA325169 rs778675253 |
152 | E>K | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1699338437 RCV001180521 |
154 | N>K | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002225455 RCV000154587 RCV000777996 CA020772 rs727504406 |
155 | T>I | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001181478 rs1699338540 |
156 | S>I | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1203996192 RCV001184017 CA351807182 |
157 | N>Y | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA10616074 RCV000335327 rs886058303 RCV000405237 RCV000295388 |
158 | P>S | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection Marfan syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1699338750 RCV001179470 |
159 | D>missing | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001176709 rs770804409 CA049087 |
166 | Q>R | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs779052721 CA049119 RCV000476748 |
167 | V>A | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs759362407 CA049134 RCV001184162 RCV002068375 |
169 | G>R | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1699339733 RCV001182160 |
169 | G>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000547310 RCV001578255 CA049148 rs767581059 |
171 | S>G | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1553630079 RCV000521506 RCV002304212 CA351807311 |
178 | V>D | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1371905176 CA351807346 RCV001182662 |
184 | I>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1371905176 RCV001176862 |
184 | I>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs368346624 RCV000466091 CA049238 RCV000481213 |
186 | F>I | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001269947 rs780542125 CA049279 VAR_076167 RCV001180574 RCV000765720 RCV000455175 RCV001149562 |
190 | R>H | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 LDS2 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000125486 RCV000313129 RCV000228364 VAR_017606 RCV000352880 RCV000589501 RCV002498604 CA020776 rs56105708 |
191 | V>I | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs748437880 CA049340 RCV001176584 |
193 | R>Q | Variant assessed as Somatic; 0.0 impact. Familial thoracic aortic aneurysm and aortic dissection [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs61762550 CA049333 RCV000867562 RCV002227094 |
193 | R>W | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA351807448 RCV001306055 rs1431838247 |
199 | S>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001186987 rs1699342734 |
202 | E>K | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs773431795 RCV001224499 CA049378 |
204 | G>S | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000037738 CA020780 RCV000557588 rs150022335 RCV000766909 |
206 | T>M | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001177654 rs371209879 |
207 | R>P | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs371209879 RCV001090472 RCV002493409 RCV000772797 CA049422 RCV002265877 |
207 | R>Q | Variant assessed as Somatic; 0.0 impact. Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001178064 rs775640617 CA049408 |
207 | R>W | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1288771489 CA351807509 RCV001577216 RCV001186790 |
209 | L>F | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1699343672 RCV001181837 |
210 | M>I | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001186446 rs1699343778 |
212 | F>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
CA049482 RCV001179660 rs764821003 |
214 | E>K | Variant assessed as Somatic; 0.0 impact. Familial thoracic aortic aneurysm and aortic dissection [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA049515 RCV000654786 rs758827786 |
215 | H>Q | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001183598 rs1252128858 CA351807555 |
215 | H>R | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1699344317 RCV001189041 |
216 | C>Y | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs149141477 RCV000242279 CA049532 RCV000660320 RCV000983821 |
217 | A>P | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001755913 RCV000536041 rs1553630112 CA351807588 |
220 | L>P | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA049609 rs748195637 RCV001212101 |
224 | R>C | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA049628 rs112465572 RCV000773801 |
224 | R>H | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000817536 CA351807618 rs1575157609 |
225 | S>P | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1559466786 CA351807642 RCV000770346 |
228 | S>I | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001179173 RCV001375501 rs150116445 CA049688 RCV001551469 |
230 | T>M | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV003142101 RCV001176313 CA049770 rs761231369 VAR_076168 |
247 | D>V | Familial thoracic aortic aneurysm and aortic dissection LDS2 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs1699346690 RCV001068654 |
253 | G>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000525396 rs863223856 RCV000198902 CA323430 RCV002478687 |
254 | R>C | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA049848 rs751948498 RCV001178414 |
254 | R>H | Variant assessed as Somatic; 0.0 impact. Familial thoracic aortic aneurysm and aortic dissection [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000208008 CA351696 rs869025536 |
258 | V>D | Loeys-Dietz syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA049882 RCV001180824 rs767919854 |
259 | Y>C | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA351807886 RCV001176244 rs1412125264 |
265 | Q>H | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001178387 RCV002497624 rs139078984 CA049919 |
268 | S>L | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
RCV001186988 rs1699347991 |
270 | Q>R | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001054062 rs1699348482 |
276 | V>F | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000244146 rs886038794 COSM1593590 CA10587565 RCV002251451 |
277 | K>N | Variant assessed as Somatic; impact. endometrium Loeys-Dietz syndrome 2 [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar Ensembl NCI-TCGA dbSNP |
|
rs1559466871 RCV000698826 CA351807967 |
278 | I>F | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV002570632 CA049980 rs746824357 RCV001258149 |
279 | F>L | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA351807989 rs1210616464 RCV001181483 |
281 | Y>C | Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP |
|
RCV001179812 rs1210616464 |
281 | Y>F | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001180232 rs374708133 CA049994 |
284 | Y>C | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
RCV002514932 rs727503472 RCV000152004 CA020788 |
287 | W>R | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1575157782 RCV000796537 CA351808053 |
290 | E>G | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001296651 rs1699349663 |
291 | K>missing | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
CA351808065 RCV001223849 rs1254102909 |
292 | D>N | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA050066 RCV001180059 rs751587466 |
298 | N>S | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000590283 CA325027 rs863223857 RCV000200455 RCV000251947 |
301 | H>R | Loeys-Dietz syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs773932892 CA050124 RCV000799279 |
303 | N>H | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1553630171 RCV000519818 CA351808156 RCV001857962 RCV000765721 |
305 | L>F | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001220673 rs1553630174 RCV001732076 |
305 | L>H | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1553630174 CA351808159 RCV001538284 RCV000540262 |
305 | L>R | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_066723 | 306 | Q>HE | LDS2 [UniProt] | Yes | UniProt |
|
VAR_022351 rs28934568 CA020791 RCV000013329 |
308 | L>P | Loeys-Dietz syndrome 2 LDS2; has a negative effect on TGF-beta signaling [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV002485504 rs1553630181 CA351808185 RCV000660321 |
310 | A>T | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs200361387 RCV001585942 RCV001046064 CA050258 |
313 | R>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000688154 RCV000765722 RCV000998013 rs200361387 CA050250 |
313 | R>Q | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001799741 rs55751315 CA71528357 RCV001190463 RCV001374779 |
313 | R>W | Familial thoracic aortic aneurysm and aortic dissection Isolated thoracic aortic aneurysm [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000626289 RCV000290470 CA020555 VAR_008156 RCV001310481 RCV000344037 RCV000247266 RCV001094839 RCV000013325 rs34833812 RCV002276544 |
315 | T>M | Loeys-Dietz syndrome Ehlers-Danlos syndrome Familial colorectal cancer Familial thoracic aortic aneurysm and aortic dissection Colorectal cancer, hereditary nonpolyposis, type 6 (hnpcc6) Loeys-Dietz syndrome 2 Colorectal cancer, hereditary nonpolyposis, type 6 Marfan syndrome HNPCC6 [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs754785934 RCV001184396 CA050632 |
318 | G>A | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP |
|
RCV000660322 CA351808259 rs1553630191 |
321 | Y>C | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001773689 rs1699353079 RCV001345408 |
323 | L>R | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001296215 rs781018006 CA050696 RCV001547011 RCV002487107 RCV000238729 |
323 | L>V | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
| VAR_076169 | 325 | T>P | LDS2 [UniProt] | Yes | UniProt |
|
RCV000864105 rs148665451 RCV000987136 CA020563 RCV000148892 RCV001704074 |
329 | A>T | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 1 Marfan syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001177962 rs1699353812 |
333 | L>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1699354101 RCV001329671 |
334 | Q>H | Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000546745 CA351808352 rs104893812 |
336 | Y>D | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001180981 rs1699354286 |
336 | Y>F | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
CA020575 RCV000013332 rs104893812 VAR_022352 |
336 | Y>N | Loeys-Dietz syndrome 2 LDS2 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA71528567 RCV001532479 rs752866783 RCV001267474 RCV001880147 |
338 | T>M | Familial thoracic aortic aneurysm and aortic dissection Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA323392 rs727503473 RCV000198865 RCV001804933 |
339 | R>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000152005 RCV000808510 rs727503473 RCV002245982 CA020579 RCV003137652 |
339 | R>P | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001177559 rs727503473 CA045405 |
339 | R>Q | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000415648 CA045395 RCV000781901 RCV000765723 RCV000415679 RCV001310482 RCV000809777 rs761991787 |
339 | R>W | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 Lynch syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs758614833 CA045437 RCV001062603 |
343 | S>G | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1699355189 RCV001190783 |
347 | L>missing | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs144701411 RCV000315631 RCV000263258 RCV000354050 CA045456 |
348 | R>C | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection Marfan syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
COSM1593587 CA045468 RCV000809072 rs369450067 RCV000498047 |
348 | R>H | Variant assessed as Somatic; 0.0 impact. Familial thoracic aortic aneurysm and aortic dissection endometrium [NCI-TCGA, ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs869025537 RCV002399772 CA351866 RCV000208228 |
351 | G>D | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA351808443 rs1553630221 RCV000624764 |
351 | G>R | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000557035 CA351808459 rs1553630235 |
353 | S>F | Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
RCV001851822 VAR_022353 CA020590 RCV001253567 RCV000013333 RCV001193761 rs104893813 |
355 | A>P | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 Colorectal cancer, hereditary nonpolyposis, type 6 LDS2 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000426608 CA16604494 RCV001368997 RCV002289581 rs104893813 |
355 | A>T | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA322326 RCV001183813 rs199660234 RCV000197867 |
356 | R>G | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA020594 RCV000805236 rs727504292 RCV000154307 RCV000624184 |
356 | R>P | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001547687 CA045577 rs727504292 RCV002259381 RCV001178138 |
356 | R>Q | Variant assessed as Somatic; 0.0 impact. Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs199660234 RCV000489285 RCV001180612 CA045560 |
356 | R>W | Variant assessed as Somatic; 4.771e-05 impact. Familial thoracic aortic aneurysm and aortic dissection [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
| VAR_076170 | 357 | G>R | LDS2 [UniProt] | Yes | UniProt |
|
CA020598 VAR_022354 RCV000013334 rs104893814 |
357 | G>W | Loeys-Dietz syndrome 2 LDS2 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001192266 rs189119533 |
360 | H>Y | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs777332888 CA045643 RCV001178602 |
366 | T>A | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA020605 RCV000030541 RCV000251845 RCV000756779 RCV000152008 RCV000680612 VAR_041416 RCV002277108 rs35719192 RCV000327596 |
373 | M>I | Connective tissue disorder Loeys-Dietz syndrome Ehlers-Danlos syndrome Familial thoracic aortic aneurysm and aortic dissection Marfan syndrome [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1699357750 RCV001176454 |
373 | M>K | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001347717 CA16604508 RCV000424003 rs1057524399 |
374 | P>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001060468 rs755967723 |
376 | V>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000765724 CA045758 rs755967723 RCV000457732 RCV001591087 |
376 | V>M | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1553630274 CA351808600 RCV000654794 VAR_066724 |
377 | H>R | Familial thoracic aortic aneurysm and aortic dissection LDS2 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV002546347 RCV001329672 rs1575158079 RCV000788511 CA351808610 RCV002246310 |
378 | R>S | Malignant tumor of esophagus Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinVar dbSNP ClinGen Ensembl |
|
rs1553630282 RCV000550384 |
379 | D>missing | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1699358560 RCV001071283 |
381 | K>R | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002510401 CA020613 RCV000589903 rs193922661 RCV000654811 |
384 | N>K | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001753434 RCV001000796 CA020609 RCV000030542 RCV000811071 rs193922660 COSM1670024 |
384 | N>S | Loeys-Dietz syndrome ovary Familial thoracic aortic aneurysm and aortic dissection [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
RCV002466481 CA045783 RCV000822694 RCV000250474 rs137908708 RCV002503959 |
385 | I>V | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA351808658 RCV001856230 RCV000788915 rs1575158103 |
386 | L>F | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000030544 RCV000414949 RCV000152009 RCV001703428 CA020619 RCV000249454 RCV002277109 rs35766612 |
387 | V>L | Loeys-Dietz syndrome Ehlers-Danlos syndrome Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000345619 RCV001094865 RCV000148893 RCV002277125 RCV003224121 RCV000288248 RCV001703884 RCV000768109 CA020617 rs35766612 RCV000509502 VAR_022355 RCV000249404 RCV000037728 |
387 | V>M | Loeys-Dietz syndrome Ehlers-Danlos syndrome Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 Congenital aneurysm of ascending aorta Marfan syndrome a breast tumor [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000654810 RCV002510401 rs193922662 RCV000586639 CA020623 |
388 | K>R | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1049576348 CA71528854 RCV001180899 |
389 | N>S | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000253481 CA10587569 rs886039106 |
393 | C>Y | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA351808708 rs1553630289 RCV000556671 |
394 | C>Y | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000253663 rs863223845 CA10587567 |
397 | D>N | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA322774 rs863223845 RCV000807163 |
397 | D>Y | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001182542 rs1699359959 |
398 | F>C | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1699359959 RCV001296248 |
398 | F>S | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1575158141 RCV001571560 CA351808754 RCV000810644 |
401 | S>F | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001770219 RCV001182489 RCV000254401 CA10587572 RCV000765725 rs886038960 |
403 | R>C | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000397892 RCV000198738 RCV000338480 RCV002500607 CA045917 RCV000299880 rs143095746 |
403 | R>H | Loeys-Dietz syndrome Variant assessed as Somatic; 0.0 impact. Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 Marfan syndrome [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001186815 rs1699360600 |
405 | D>N | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000197266 CA045946 RCV000208444 rs748480163 |
406 | P>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000699428 rs1559467311 CA351808784 |
407 | T>A | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA045964 RCV001070194 rs770352403 |
408 | L>M | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001189342 rs1699360883 |
409 | S>missing | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1699361098 RCV001170897 |
409 | S>F | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001212785 rs1699361055 |
409 | S>P | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1699361148 RCV001187708 |
412 | D>E | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
CA351808821 rs1559467328 RCV000680125 |
413 | L>Q | Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1060501983 RCV001177233 |
416 | S>C | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000464518 rs1060501983 CA16611396 |
416 | S>G | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA322630 RCV002408874 rs863223847 RCV000198137 |
419 | V>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA351808880 rs1553630426 RCV000550146 |
420 | G>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000234122 rs878854610 CA10582147 |
424 | Y>C | Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
RCV002533798 rs1559467821 CA351808899 RCV000756781 |
424 | Y>H | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1699391960 RCV001338135 |
425 | M>I | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000694569 RCV001260329 rs104893817 CA351808905 |
425 | M>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA351808907 rs1553630438 RCV000654801 |
425 | M>T | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001325332 CA020640 rs104893817 RCV000013342 |
425 | M>V | Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. Loeys-Dietz syndrome 2 [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
rs730880224 RCV000157518 CA020644 |
426 | A>V | Loeys-Dietz syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs104893818 RCV000013343 CA020649 |
427 | P>L | Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1699392675 RCV001063695 |
433 | R>T | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
CA351808962 rs1575158954 RCV000820940 |
434 | M>T | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
VAR_028063 RCV001179356 RCV002483974 CA046294 rs1050833 |
439 | V>A | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs1699393061 RCV001228616 |
440 | E>A | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001327183 rs1699393106 |
441 | S>Y | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000687203 RCV000243893 CA10587571 rs886038936 |
445 | T>N | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA10588355 RCV002245988 RCV000692078 VAR_066725 rs886039551 COSM1593641 RCV000624602 RCV000255277 |
446 | D>N | pancreas Familial thoracic aortic aneurysm and aortic dissection large_intestine Variant assessed as Somatic; impact. endometrium Loeys-Dietz syndrome 2 Loeys-Dietz syndrome 1 LDS2 [Cosmic, ClinVar, NCI-TCGA, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt Ensembl NCI-TCGA dbSNP |
|
rs1575158992 RCV002307620 RCV000804717 CA351809051 |
447 | V>D | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs104893807 CA16611314 RCV000469243 |
449 | S>C | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs104893807 CA020657 VAR_022358 RCV000013330 |
449 | S>F | Loeys-Dietz syndrome 2 LDS2; has a negative effect on TGF-beta signaling [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001863104 RCV001196257 rs1699393884 |
452 | L>P | Malignant tumor of esophagus Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001183422 rs1218684641 CA351809121 |
457 | M>I | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
| VAR_066726 | 457 | M>K | LDS2 [UniProt] | Yes | UniProt |
|
rs1699394098 RCV001192000 |
458 | T>I | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000654788 RCV000013339 CA020661 VAR_029760 RCV000199227 rs104893811 RCV000252297 |
460 | R>C | Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. Loeys-Dietz syndrome 2 LDS2 [ClinVar, NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl NCI-TCGA dbSNP |
|
RCV000702388 VAR_029761 RCV000013340 RCV000196002 CA020664 rs104893816 |
460 | R>H | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 Variant assessed as Somatic; 4.62e-05 impact. LDS2 [ClinVar, NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt NCI-TCGA dbSNP gnomAD |
|
RCV000654802 rs104893816 CA351809138 COSM3780876 |
460 | R>L | pancreas Familial thoracic aortic aneurysm and aortic dissection [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar dbSNP gnomAD |
|
rs1553630457 RCV000499370 CA351809141 |
461 | C>R | Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV002283457 rs587782979 RCV000143955 CA020670 RCV002515939 |
461 | C>Y | Loeys-Dietz syndrome Loeys-Dietz syndrome 2 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1321865816 RCV001189836 CA351809187 |
466 | E>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs760797386 RCV001035388 |
470 | Y>C | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000197170 CA321611 COSM3392338 RCV002310796 rs863224935 |
470 | Y>D | pancreas Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
RCV000822704 RCV002223956 CA351809210 rs863224935 |
470 | Y>N | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001184866 CA351809258 rs1182402824 |
477 | K>N | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
CA351809268 RCV000548667 rs1553631704 RCV002506374 |
479 | R>Q | Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. Loeys-Dietz syndrome 2 [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
rs1559472349 RCV000770349 |
484 | V>missing | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001149682 RCV000687720 rs767120937 CA71543652 |
487 | M>L | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000590654 RCV001860134 rs754176932 CA351809351 RCV001195914 |
491 | V>M | Malignant tumor of esophagus Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000253575 RCV000195964 RCV000763512 CA020690 COSM3392340 RCV000013344 rs104893819 RCV000157519 |
495 | R>* | Loeys-Dietz syndrome pancreas Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. Loeys-Dietz syndrome 2 [ClinVar, Cosmic, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA TOPMed dbSNP |
|
RCV001191889 CA351809379 rs1305853447 |
495 | R>Q | Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
CA323609 RCV000199072 RCV000244033 RCV000680613 rs863223852 RCV001449740 COSM2983538 RCV000490801 |
497 | R>* | Connective tissue disorder Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection large_intestine Variant assessed as Somatic; impact. Loeys-Dietz syndrome 2 [ClinVar, Cosmic, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA dbSNP gnomAD |
|
RCV000552840 CA351809392 rs1553631720 |
498 | P>A | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001352548 rs1699661646 |
498 | P>R | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs397516840 CA020693 RCV000037735 |
499 | E>* | Loeys-Dietz syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001178776 rs772201128 CA046740 |
503 | F>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA351809437 RCV000856739 rs1575165272 RCV002538885 |
504 | W>* | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1575165264 CA351809432 RCV000811559 |
504 | W>R | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001185368 CA046747 rs780087626 |
506 | N>S | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA351809476 RCV000819301 rs1575166620 |
509 | G>S | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA320238 rs863223853 RCV001374782 RCV000195860 RCV000801577 VAR_066727 |
509 | G>V | Familial thoracic aortic aneurysm and aortic dissection Isolated thoracic aortic aneurysm LDS2 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs878854611 RCV000227819 |
510 | I>missing | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_066728 | 510 | I>F | LDS2 [UniProt] | Yes | UniProt |
| VAR_066729 | 510 | I>S | LDS2 [UniProt] | Yes | UniProt |
|
RCV000456592 CA16611191 rs1060501984 |
511 | Q>* | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1575166637 RCV000797921 |
513 | V>missing | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000030548 rs193922664 VAR_066730 CA020708 |
514 | C>R | Loeys-Dietz syndrome LDS2 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000217150 rs876658120 |
516 | T>missing | Marfan syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000469702 rs149847376 RCV002480399 CA047010 |
516 | T>M | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA322276 RCV000197820 RCV002399733 rs370708687 RCV000660593 |
516 | T>S | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ESP TOPMed dbSNP |
|
RCV000774494 rs1559473413 CA351809529 |
517 | L>M | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000699504 RCV000656212 rs1553631968 CA351809564 COSM1645168 |
521 | W>* | Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. Wolff-Parkinson-White pattern breast [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar Ensembl NCI-TCGA dbSNP |
|
rs1575166666 RCV002249611 CA351809559 VAR_066731 RCV001000995 RCV002549148 |
521 | W>R | Familial thoracic aortic aneurysm and aortic dissection Malignant tumor of esophagus LDS2 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000473289 CA16611213 rs886038768 |
522 | D>A | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000198083 CA322561 RCV000704530 rs863223854 |
522 | D>N | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs727504421 RCV000987137 RCV000157520 RCV000225734 RCV000995668 RCV001042957 CA020712 |
524 | D>N | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. Loeys-Dietz syndrome 2 Marfan syndrome [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
RCV001051221 rs727504421 CA020717 RCV000154616 |
524 | D>Y | Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
rs1699708427 RCV001236076 |
525 | P>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs121918714 RCV000688883 RCV000013326 CA020721 VAR_015816 |
526 | E>Q | Malignant tumor of esophagus Familial thoracic aortic aneurysm and aortic dissection esophageal cancer [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001170900 rs1699708566 |
526 | E>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002274934 RCV000152012 CA020724 RCV000588481 rs727503476 RCV001066818 |
527 | A>V | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
VAR_022360 RCV000013337 COSM1650139 rs104893810 RCV000691207 RCV000825631 RCV000197944 CA020726 |
528 | R>C | lung Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. Loeys-Dietz syndrome 2 LDS2 [Cosmic, ClinVar, NCI-TCGA, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt Ensembl NCI-TCGA dbSNP |
|
RCV000654809 CA020730 VAR_022361 rs104893815 RCV000013336 RCV000200178 RCV000211858 RCV000013335 |
528 | R>H | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection Colorectal cancer, hereditary nonpolyposis, type 6 (hnpcc6) Variant assessed as Somatic; impact. Loeys-Dietz syndrome 2 Colorectal cancer, hereditary nonpolyposis, type 6 LDS2 [ClinVar, Ensembl, NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl NCI-TCGA dbSNP |
| VAR_076171 | 530 | T>I | LDS2 [UniProt] | Yes | UniProt |
|
rs1699708963 RCV001303595 |
530 | T>R | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs727503477 RCV002399532 RCV000152013 RCV002508195 CA020734 |
531 | A>T | Loeys-Dietz syndrome Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs750806566 RCV001179505 |
532 | Q>H | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs587776769 RCV000013324 |
535 | A>missing | Colorectal cancer, hereditary nonpolyposis, type 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1699709401 RCV001050416 |
535 | A>missing | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
CA020742 rs104893809 RCV000529794 RCV000013331 RCV000196289 VAR_022362 |
537 | R>C | Familial thoracic aortic aneurysm and aortic dissection Variant assessed as Somatic; impact. Loeys-Dietz syndrome 2 LDS2; has a negative effect on TGF-beta signaling [ClinVar, NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl NCI-TCGA dbSNP |
|
rs1035228561 RCV001037348 CA71547245 |
539 | S>I | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs752099306 RCV001038665 |
547 | L>V | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs755070814 RCV001555666 RCV000464975 CA047170 RCV002480400 RCV001420946 |
548 | S>L | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs748418894 RCV001189486 RCV000590443 RCV002497236 CA047200 |
549 | G>W | Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP |
|
CA2294235 RCV001178521 rs569635708 RCV001773424 |
553 | S>L | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP |
|
RCV000152014 CA020746 RCV000337404 rs112215250 RCV000148891 RCV000241715 RCV000587520 RCV000680614 RCV001094793 RCV000239196 RCV002277295 |
553 | S>T | Connective tissue disorder Loeys-Dietz syndrome Ehlers-Danlos syndrome Familial thoracic aortic aneurysm and aortic dissection Loeys-Dietz syndrome 2 Congenital aneurysm of ascending aorta Marfan syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001180098 CA351809776 rs1325892805 |
555 | E>K | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001190889 rs767015322 |
556 | K>missing | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001186003 rs376815143 CA020750 RCV000154536 RCV001843485 |
560 | D>E | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1559473531 RCV000768335 CA351809822 RCV003224459 |
561 | G>A | Loeys-Dietz syndrome 2 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001181679 rs1559473531 |
561 | G>D | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinVar dbSNP |
|
rs979710806 CA71547406 RCV000689560 |
566 | T>S | Familial thoracic aortic aneurysm and aortic dissection [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA050096 rs780267559 |
3 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 6 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA047505 rs777080264 |
8 | G>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 8 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs920370571 CA72289963 |
9 | L>R | No |
ClinGen TOPMed |
|
|
rs1206093523 CA351830515 |
11 | P>L | No |
ClinGen gnomAD |
|
|
CA351830512 rs1201208132 |
11 | P>T | No |
ClinGen TOPMed |
|
|
CA351830528 rs1437593960 |
13 | H>Q | No |
ClinGen gnomAD |
|
|
rs769700663 CA048150 |
13 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1234963515 CA351830560 |
18 | T>M | No |
ClinGen gnomAD |
|
|
CA049291 rs763085648 |
19 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1037753551 CA72289965 |
20 | I>N | No |
ClinGen Ensembl |
|
|
CA049753 rs775405890 |
24 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1410470306 CA351830600 |
25 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 28 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1225583022 CA351830620 |
28 | V>F | No |
ClinGen TOPMed |
|
|
rs1269086905 CA351830637 |
30 | K>R | No |
ClinGen gnomAD |
|
|
rs761400349 CA050162 |
31 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1575143650 CA351806313 |
35 | D>E | No |
ClinGen Ensembl |
|
|
rs17025864 CA351806315 |
36 | M>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA71499880 rs969666859 |
37 | I>V | No |
ClinGen gnomAD |
|
|
CA020754 RCV000037730 rs397516837 |
40 | D>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs770482275 CA046247 |
43 | G>A | No |
ClinGen ExAC |
|
|
rs749239632 CA71499897 |
43 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749239632 CA046230 |
43 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA046311 rs759231102 |
44 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA351806377 RCV000578622 rs1553627148 |
46 | K>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA047030 rs767191783 |
52 | K>T | No |
ClinGen ExAC |
|
|
rs1192366381 CA351806442 |
55 | D>N | No |
ClinGen gnomAD |
|
|
CA047221 rs549429104 |
55 | D>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA047305 rs200924849 |
56 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs200924849 CA351806448 |
56 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA351806474 rs1170423783 |
60 | T>P | No |
ClinGen gnomAD |
|
|
CA351806475 rs1170423783 |
60 | T>S | No |
ClinGen gnomAD |
|
| VAR_041414 | 61 | C>R | a gastric adenocarcinoma sample; somatic mutation [UniProt] | No | UniProt |
| TCGA novel | 64 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 65 | K>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1301512235 CA351806524 |
66 | S>C | No |
ClinGen gnomAD |
|
|
CA351806522 rs1575143713 |
66 | S>P | No |
ClinGen Ensembl |
|
| TCGA novel | 67 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351806535 rs1060501985 |
68 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1405785027 CA351806557 CA351806556 |
70 | N>K | No |
ClinGen gnomAD |
|
| VAR_036070 | 73 | I>V | a colorectal cancer sample; somatic mutation [UniProt] | No | UniProt |
| TCGA novel | 74 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351806580 rs1575143738 |
74 | T>P | No |
ClinGen Ensembl |
|
|
CA351806593 rs754370908 |
76 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs913573840 CA71499932 |
76 | I>T | No |
ClinGen Ensembl |
|
|
rs754370908 CA047457 |
76 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 78 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765447350 CA047530 |
81 | Q>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 87 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351806694 rs1215812419 |
88 | W>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA351806729 rs1182342277 |
93 | E>G | No |
ClinGen gnomAD |
|
|
rs1223065891 CA351806755 |
97 | L>V | No |
ClinGen TOPMed |
|
|
rs1473367944 CA351806763 |
98 | E>G | No |
ClinGen gnomAD |
|
|
RCV000199130 CA323667 rs863223837 |
99 | T>I | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs144137785 CA71503219 |
101 | C>Y | No |
ClinGen ESP TOPMed |
|
|
rs777472799 CA047939 |
102 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA351806800 rs193922665 |
104 | P>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 105 | K>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs756999639 CA047980 |
108 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
RCV000521998 rs1553627759 CA351806835 |
109 | H>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs778838598 CA71503253 |
109 | H>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 115 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351806878 rs1575146525 |
115 | D>V | No |
ClinGen Ensembl |
|
|
rs779603895 CA351806884 |
116 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1575146526 CA351806881 |
116 | A>T | No |
ClinGen Ensembl |
|
|
CA048044 rs779603895 |
116 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351806899 rs1347722182 |
119 | P>S | No |
ClinGen TOPMed |
|
| TCGA novel | 120 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1263124193 CA351806933 |
123 | M>I | No |
ClinGen gnomAD |
|
|
CA351806928 rs1202323737 |
123 | M>K | No |
ClinGen gnomAD |
|
|
rs776374040 CA351806938 |
124 | K>M | No |
ClinGen ExAC gnomAD |
|
|
CA048072 rs776374040 |
124 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA048087 rs762282124 |
125 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA351806941 rs1389197358 |
125 | E>K | No |
ClinGen TOPMed |
|
|
rs1559458941 CA351807015 |
135 | M>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs377455599 CA048250 |
135 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 141 | D>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351807065 rs1199303428 |
142 | E>K | No |
ClinGen TOPMed |
|
|
CA048289 rs759498108 |
144 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs767805920 CA048299 |
145 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1042058790 CA71503357 |
146 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA321058 RCV000196640 rs863223836 |
146 | N>S | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA351807106 rs1559458984 |
148 | I>F | No |
ClinGen Ensembl |
|
| rs1274930605 | 149 | F>missing | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA048521 rs778675253 |
152 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA71527553 rs1014929115 |
157 | N>S | No |
ClinGen TOPMed |
|
|
rs891238058 CA71527573 |
159 | D>A | No |
ClinGen TOPMed |
|
|
CA351807202 rs1252013911 |
160 | L>S | No |
ClinGen gnomAD |
|
|
rs1385327750 CA351807217 |
162 | L>P | No |
ClinGen gnomAD |
|
| TCGA novel | 166 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779052721 CA71527595 |
167 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1266079634 CA351807246 |
167 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1177473314 CA351807255 |
168 | T>I | No |
ClinGen gnomAD |
|
|
rs1371331911 CA351807277 |
172 | L>F | No |
ClinGen gnomAD |
|
|
CA049160 rs752627750 |
172 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1387250073 CA351807296 |
175 | P>L | No |
ClinGen gnomAD |
|
|
rs763513004 CA049183 |
181 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA049195 rs376358046 |
182 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1371905176 CA351807345 |
184 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
RCV000196769 CA321188 rs863223839 |
184 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
| TCGA novel | 187 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA71527750 rs973407277 |
188 | C>G | No |
ClinGen TOPMed |
|
|
CA71527742 rs973407277 |
188 | C>R | No |
ClinGen TOPMed |
|
|
rs758703490 CA049271 |
190 | R>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 191 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1270027856 CA351807401 CA351807402 |
192 | N>K | No |
ClinGen gnomAD |
|
|
CA351807457 rs1162997625 |
201 | W>R | No |
ClinGen gnomAD |
|
|
CA351807487 rs1233710052 |
205 | K>R | No |
ClinGen Ensembl |
|
|
rs1295365314 CA351807492 |
206 | T>A | No |
ClinGen gnomAD |
|
|
rs1288771489 CA351807508 |
209 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs763709160 CA049440 |
210 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA351807540 rs1427971419 |
213 | S>N | No |
ClinGen TOPMed |
|
|
rs1249003122 CA351807552 |
215 | H>N | No |
ClinGen gnomAD |
|
|
CA049566 rs752110046 |
218 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs781692282 CA049589 |
223 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs202056618 CA71527972 |
227 | I>V | No |
ClinGen 1000Genomes |
|
|
rs772053650 CA049673 |
229 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA320151 rs863223840 RCV000195779 |
234 | N>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
| TCGA novel | 240 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1208408166 CA351807773 |
248 | T>A | No |
ClinGen gnomAD |
|
|
CA351807778 rs1278268899 |
249 | L>V | No |
ClinGen Ensembl |
|
|
CA351807785 rs1173580610 |
250 | V>L | No |
ClinGen TOPMed |
|
|
CA351807801 rs1160016010 |
252 | K>N | No |
ClinGen gnomAD |
|
|
rs1472336039 CA351807799 |
252 | K>R | No |
ClinGen gnomAD |
|
|
CA351807803 rs1559466824 RCV000762369 |
253 | G>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs751948498 CA351807812 |
254 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA71528083 rs184297150 |
258 | V>L | No |
ClinGen 1000Genomes |
|
|
rs755317450 CA049865 |
259 | Y>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 262 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 262 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA71528114 rs868549326 |
264 | K>T | No |
ClinGen Ensembl |
|
|
rs753184709 CA049908 |
266 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs867285040 CA71528125 |
267 | T>I | No |
ClinGen Ensembl |
|
| TCGA novel | 269 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351807941 rs1415684178 |
273 | T>I | No |
ClinGen TOPMed |
|
|
CA351807946 rs1228411775 |
274 | V>A | No |
ClinGen gnomAD |
|
|
rs757521476 CA049958 |
275 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs200679764 CA71528136 |
276 | V>G | No |
ClinGen gnomAD |
|
|
rs1318654289 CA351807975 |
279 | F>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 281 | Y>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1085307498 RCV000489303 |
282 | E>missing | No |
ClinVar dbSNP |
|
|
rs1249816685 CA351808007 |
283 | E>D | No |
ClinGen gnomAD |
|
|
CA050010 rs776497237 |
285 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1260260285 CA351808076 |
293 | I>T | No |
ClinGen TOPMed |
|
|
rs748102367 CA050020 |
293 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 294 | F>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1365040421 CA351808092 |
295 | S>L | No |
ClinGen gnomAD |
|
| TCGA novel | 296 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA050052 rs772678321 |
297 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs751587466 CA71528229 |
298 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 302 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766038199 CA050112 |
302 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1328891008 CA351808151 |
304 | I>T | No |
ClinGen gnomAD |
|
|
rs1383281802 CA351808148 |
304 | I>V | No |
ClinGen gnomAD |
|
|
rs1274833112 CA351808166 |
306 | Q>H | No |
ClinGen gnomAD |
|
|
CA050182 rs202168735 |
309 | T>M | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 310 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs397516841 CA020552 RCV000037739 |
312 | E>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs200361387 CA351808207 |
313 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 316 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 317 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1575157861 CA351808228 |
317 | L>V | No |
ClinGen Ensembl |
|
| TCGA novel | 319 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1335113103 CA351808268 |
322 | W>* | No |
ClinGen gnomAD |
|
|
CA351808269 rs1335113103 |
322 | W>C | No |
ClinGen gnomAD |
|
|
rs863223858 CA321434 RCV000197001 |
322 | W>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA050718 rs769750420 |
326 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA351808300 rs1429960106 |
327 | F>L | No |
ClinGen gnomAD |
|
|
CA050726 rs193922666 |
328 | H>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| VAR_041415 | 328 | H>Y | a lung neuroendocrine carcinoma sample; somatic mutation [UniProt] | No | UniProt |
|
CA050756 rs376752333 |
329 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA351808322 rs1332138742 |
331 | G>D | No |
ClinGen gnomAD |
|
|
CA050772 rs759215875 |
331 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA324102 RCV000199560 rs863223841 |
333 | L>Q | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs775897166 CA351808341 |
334 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA045319 rs775897166 |
334 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA71528506 rs17854016 |
335 | E>* | No |
ClinGen Ensembl |
|
|
CA71528554 rs752866783 |
338 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
rs750658746 CA045424 |
342 | I>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 345 | E>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA71528616 rs756159556 |
352 | S>R | No |
ClinGen Ensembl |
|
|
CA045505 rs777689025 |
354 | L>I | No |
ClinGen ExAC |
|
|
rs104893813 CA045538 |
355 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778467588 CA045550 |
355 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370995723 CA045607 |
357 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs189119533 CA045619 RCV000788389 |
360 | H>D | No |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
|
rs727503474 RCV000152007 |
361 | L>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 361 | L>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs863223842 RCV000200101 CA324658 |
362 | H>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs149195553 CA351808519 |
364 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1244365502 CA351808515 |
364 | D>H | No |
ClinGen gnomAD |
|
|
CA351808539 rs1226482581 |
367 | P>L | No |
ClinGen gnomAD |
|
|
rs765447250 CA045693 |
369 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA351808549 rs765447250 |
369 | G>W | No |
ClinGen ExAC gnomAD |
|
|
rs550421922 CA351808555 |
370 | R>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA045705 rs550421922 |
370 | R>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 371 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs753782498 CA351808572 |
372 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA320627 rs863223843 RCV000196206 |
374 | P>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA71528768 rs927452109 |
375 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs886038847 RCV000247764 CA10587568 |
379 | D>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
RCV000198413 CA322910 rs863223844 |
382 | S>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA351808655 rs1400565122 |
385 | I>M | No |
ClinGen gnomAD |
|
|
CA71528774 rs111319732 |
385 | I>S | No |
ClinGen Ensembl |
|
|
CA045877 rs779762218 |
391 | L>V | No |
ClinGen ExAC gnomAD |
|
|
RCV000200504 CA325083 rs863223846 |
397 | D>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1036756776 CA71528929 |
398 | F>L | No |
ClinGen TOPMed |
|
|
rs1023568316 CA71528937 |
399 | G>R | No |
ClinGen Ensembl |
|
|
CA351808762 rs143095746 |
403 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 404 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1575158153 RCV000788422 CA351808776 |
405 | D>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA71529046 rs896940233 |
407 | T>I | No |
ClinGen TOPMed |
|
|
CA351808786 rs896940233 |
407 | T>S | No |
ClinGen TOPMed |
|
|
rs1699361288 RCV001200661 |
414 | A>V | No |
ClinVar dbSNP |
|
|
CA324927 rs863223848 RCV000200367 |
419 | V>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
| TCGA novel | 420 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10587570 RCV000243905 rs886038787 |
421 | T>A | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs771094273 CA046200 |
423 | R>G | No |
ClinGen ExAC gnomAD |
|
|
RCV000788165 rs1575158901 |
423 | R>R | No |
ClinVar dbSNP |
|
|
CA71530867 rs878854610 |
424 | Y>F | No |
ClinGen Ensembl |
|
|
CA323900 RCV000199365 rs730880224 |
426 | A>D | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA321583 RCV000197140 rs863223849 |
426 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
RCV000195460 CA319801 rs863223850 |
427 | P>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
RCV000037732 rs397516838 CA020653 |
428 | E>Q | No |
ClinGen ClinVar Ensembl dbSNP |
|
| TCGA novel | 429 | V>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351808931 rs1575158925 |
429 | V>G | No |
ClinGen Ensembl |
|
|
CA351808935 rs1371233083 |
430 | L>R | No |
ClinGen gnomAD |
|
|
CA351808959 rs1355658397 |
434 | M>V | No |
ClinGen TOPMed |
|
| VAR_022356 | 435 | N>S | a breast tumor; signaling of TGF-beta significantly inhibited [UniProt] | No | UniProt |
| TCGA novel | 440 | E>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750318338 CA71530965 |
443 | K>R | No |
ClinGen Ensembl |
|
|
CA71530976 rs758294183 |
444 | Q>* | No |
ClinGen Ensembl |
|
|
CA046331 rs775637046 |
444 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA321430 rs863223851 RCV000197000 |
446 | D>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
| VAR_022357 | 447 | V>A | a breast tumor; signaling of TGF-beta significantly inhibited [UniProt] | No | UniProt |
|
CA046382 rs750434928 |
447 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA351809072 rs1480594626 |
450 | M>I | No |
ClinGen TOPMed |
|
| VAR_022359 | 452 | L>M | a breast tumor; signaling of TGF-beta significantly inhibited [UniProt] | No | UniProt |
|
CA046409 rs144766594 |
465 | G>* | No |
ClinGen ESP ExAC gnomAD |
|
|
rs772076729 CA046520 |
469 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA351809205 rs1407331537 |
469 | D>H | No |
ClinGen gnomAD |
|
|
rs772076729 CA046538 |
469 | D>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 469 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV000598649 rs1553631696 CA351809215 |
470 | Y>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs760797386 CA046550 |
470 | Y>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 471 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV000197541 CA322002 rs397516839 |
473 | P>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs397516839 RCV000037733 CA020679 |
473 | P>Q | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA71543602 rs900026603 |
475 | G>S | No |
ClinGen Ensembl |
|
|
rs769682815 CA046560 |
476 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1180382801 CA351809261 |
478 | V>L | No |
ClinGen gnomAD |
|
|
CA351809267 rs1444024775 |
479 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs762756916 CA046582 RCV000781900 |
481 | H>Y | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA046659 rs752444160 |
487 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA046645 rs767120937 |
487 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA71543680 rs891207290 |
488 | K>R | No |
ClinGen Ensembl |
|
| VAR_041417 | 490 | N>S | a gastric adenocarcinoma sample; somatic mutation [UniProt] | No | UniProt |
|
CA046695 rs754176932 |
491 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 492 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351809378 rs104893819 |
495 | R>G | No |
ClinGen TOPMed |
|
|
rs1305853447 CA351809381 |
495 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA046720 rs200958264 |
497 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
RCV001090475 rs1553631720 |
498 | P>S | No |
ClinVar dbSNP |
|
| TCGA novel | 499 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA046730 rs746373651 |
501 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA046758 rs747068726 |
507 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs776851006 CA046790 |
508 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1378593393 CA351809485 |
510 | I>T | No |
ClinGen TOPMed |
|
|
rs1166402557 CA351809503 |
512 | M>I | No |
ClinGen gnomAD |
|
|
CA351809505 rs1331629729 |
513 | V>L | No |
ClinGen TOPMed |
|
|
RCV000249863 rs886038768 CA10587573 |
522 | D>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs775441401 CA047045 |
523 | H>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 523 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA351809573 rs775441401 |
523 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs201601508 CA71547216 |
529 | L>I | No |
ClinGen Ensembl |
|
|
CA351809628 rs1196415682 |
532 | Q>P | No |
ClinGen gnomAD |
|
|
CA351809626 rs1196415682 |
532 | Q>R | No |
ClinGen gnomAD |
|
|
CA351809641 rs1275235989 |
534 | V>M | No |
ClinGen gnomAD |
|
|
RCV000429672 CA16604407 rs1057524810 |
537 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
|
rs369806947 CA71547254 |
540 | E>D | No |
ClinGen Ensembl |
|
|
CA351809696 rs375226321 |
542 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 542 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1178327690 CA351809718 |
545 | D>E | No |
ClinGen TOPMed |
|
|
rs752099306 CA047159 |
547 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA351809770 rs1575166745 |
554 | E>K | No |
ClinGen Ensembl |
|
|
CA71547328 rs200642740 |
558 | P>A | No |
ClinGen Ensembl |
|
| TCGA novel | 559 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768103695 CA047334 |
561 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA047361 rs761275220 |
566 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA351809852 rs979710806 |
566 | T>N | No |
ClinGen Ensembl |
|
|
rs772782677 CA047384 |
567 | K>T | No |
ClinGen ExAC gnomAD |
3 associated diseases with P37173
[MIM: 614331]: Hereditary non-polyposis colorectal cancer 6 (HNPCC6)
An autosomal dominant disease associated with marked increase in cancer susceptibility. It is characterized by a familial predisposition to early-onset colorectal carcinoma (CRC) and extra-colonic tumors of the gastrointestinal, urological and female reproductive tracts. HNPCC is reported to be the most common form of inherited colorectal cancer in the Western world. Clinically, HNPCC is often divided into two subgroups. Type I is characterized by hereditary predisposition to colorectal cancer, a young age of onset, and carcinoma observed in the proximal colon. Type II is characterized by increased risk for cancers in certain tissues such as the uterus, ovary, breast, stomach, small intestine, skin, and larynx in addition to the colon. Diagnosis of classical HNPCC is based on the Amsterdam criteria
[MIM: 133239]: Esophageal cancer (ESCR)
A malignancy of the esophagus. The most common types are esophageal squamous cell carcinoma and adenocarcinoma. Cancer of the esophagus remains a devastating disease because it is usually not detected until it has progressed to an advanced incurable stage. {ECO:0000269|PubMed:10789724}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 610168]: Loeys-Dietz syndrome 2 (LDS2)
An aortic aneurysm syndrome with widespread systemic involvement, characterized by arterial tortuosity and aneurysms, hypertelorism, and bifid uvula or cleft palate. Physical findings include prominent joint laxity, easy bruising, wide and atrophic scars, velvety and translucent skin with easily visible veins, spontaneous rupture of the spleen or bowel, and catastrophic complications of pregnancy, including rupture of the gravid uterus and the arteries, either during pregnancy or in the immediate postpartum period. Some patients have craniosynostosis, exotropy, micrognathia and retrognathia, structural brain abnormalities, and intellectual deficit. {ECO:0000269|PubMed:15235604, ECO:0000269|PubMed:15731757, ECO:0000269|PubMed:16027248, ECO:0000269|PubMed:16251899, ECO:0000269|PubMed:19533785, ECO:0000269|PubMed:19883511, ECO:0000269|PubMed:20101701, ECO:0000269|PubMed:20358619, ECO:0000269|PubMed:21949523, ECO:0000269|PubMed:22113417}. Note=The disease is caused by variants affecting the gene represented in this entry. TGFBR2 mutations Cys-460 and His-460 have been reported to be associated with thoracic aortic aneurysms and dissection (TAAD). This phenotype, also known as thoracic aortic aneurysms type 3 (AAT3), is distinguised from LDS2 by having aneurysms restricted to thoracic aorta. As individuals carrying these mutations also exhibit descending aortic disease and aneurysms of other arteries (PubMed:16027248), they have been considered as LDS2 by the OMIM resource. {ECO:0000269|PubMed:16027248}.
Without disease ID
- An autosomal dominant disease associated with marked increase in cancer susceptibility. It is characterized by a familial predisposition to early-onset colorectal carcinoma (CRC) and extra-colonic tumors of the gastrointestinal, urological and female reproductive tracts. HNPCC is reported to be the most common form of inherited colorectal cancer in the Western world. Clinically, HNPCC is often divided into two subgroups. Type I is characterized by hereditary predisposition to colorectal cancer, a young age of onset, and carcinoma observed in the proximal colon. Type II is characterized by increased risk for cancers in certain tissues such as the uterus, ovary, breast, stomach, small intestine, skin, and larynx in addition to the colon. Diagnosis of classical HNPCC is based on the Amsterdam criteria
- A malignancy of the esophagus. The most common types are esophageal squamous cell carcinoma and adenocarcinoma. Cancer of the esophagus remains a devastating disease because it is usually not detected until it has progressed to an advanced incurable stage. {ECO:0000269|PubMed:10789724}. Note=The disease is caused by variants affecting the gene represented in this entry.
- An aortic aneurysm syndrome with widespread systemic involvement, characterized by arterial tortuosity and aneurysms, hypertelorism, and bifid uvula or cleft palate. Physical findings include prominent joint laxity, easy bruising, wide and atrophic scars, velvety and translucent skin with easily visible veins, spontaneous rupture of the spleen or bowel, and catastrophic complications of pregnancy, including rupture of the gravid uterus and the arteries, either during pregnancy or in the immediate postpartum period. Some patients have craniosynostosis, exotropy, micrognathia and retrognathia, structural brain abnormalities, and intellectual deficit. {ECO:0000269|PubMed:15235604, ECO:0000269|PubMed:15731757, ECO:0000269|PubMed:16027248, ECO:0000269|PubMed:16251899, ECO:0000269|PubMed:19533785, ECO:0000269|PubMed:19883511, ECO:0000269|PubMed:20101701, ECO:0000269|PubMed:20358619, ECO:0000269|PubMed:21949523, ECO:0000269|PubMed:22113417}. Note=The disease is caused by variants affecting the gene represented in this entry. TGFBR2 mutations Cys-460 and His-460 have been reported to be associated with thoracic aortic aneurysms and dissection (TAAD). This phenotype, also known as thoracic aortic aneurysms type 3 (AAT3), is distinguised from LDS2 by having aneurysms restricted to thoracic aorta. As individuals carrying these mutations also exhibit descending aortic disease and aneurysms of other arteries (PubMed:16027248), they have been considered as LDS2 by the OMIM resource. {ECO:0000269|PubMed:16027248}.
1 regional properties for P37173
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | GPCR, rhodopsin-like, 7TM | 118 - 386 | IPR017452 |
Functions
| Description | ||
|---|---|---|
| EC Number | 2.7.11.30 | Protein-serine/threonine kinases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
11 GO annotations of cellular component
| Name | Definition |
|---|---|
| caveola | A membrane raft that forms small pit, depression, or invagination that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Examples include flask-shaped invaginations of the plasma membrane in adipocytes associated with caveolin proteins, and minute pits or incuppings of the cell membrane formed during pinocytosis. Caveolae may be pinched off to form free vesicles within the cytoplasm. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| external side of plasma membrane | The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface. |
| extracellular region | The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. |
| extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| membrane raft | Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| receptor complex | Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. |
| transforming growth factor beta ligand-receptor complex | A protein complex that is formed by the association of a TGF-beta dimeric ligand with 2 molecules of each receptor molecule, TGF-beta type I receptor and TGF-beta type II receptor. The receptor molecules may form homo- or heterodimers but only once bound by the ligand. |
15 GO annotations of molecular function
| Name | Definition |
|---|---|
| activin binding | Binding to activin, a dimer of inhibin-beta subunits. |
| activin receptor activity | Combining with activin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Activin is one of two gonadal glycoproteins related to transforming growth factor beta. |
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| glycosaminoglycan binding | Binding to a glycan (polysaccharide) containing a substantial proportion of aminomonosaccharide residues. |
| metal ion binding | Binding to a metal ion. |
| mitogen-activated protein kinase kinase kinase binding | Binding to a mitogen-activated protein kinase kinase kinase, a protein that can phosphorylate a MAP kinase kinase. |
| molecular adaptor activity | The binding activity of a molecule that brings together two or more molecules through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way. |
| protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. |
| SMAD binding | Binding to a SMAD signaling protein. |
| transforming growth factor beta binding | Binding to TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types. |
| transforming growth factor beta receptor activity | Combining with a transforming growth factor beta (TGFbeta) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. |
| transforming growth factor beta receptor activity, type II | Combining with transforming growth factor beta to initiate a change in cell activity; upon ligand binding, binds to and catalyzes the phosphorylation of a type I TGF-beta receptor. |
| transmembrane receptor protein serine/threonine kinase activity | Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. |
| type I transforming growth factor beta receptor binding | Binding to a type I transforming growth factor beta receptor. |
| type III transforming growth factor beta receptor binding | Binding to a type III transforming growth factor beta receptor. |
74 GO annotations of biological process
| Name | Definition |
|---|---|
| activation of protein kinase activity | Any process that initiates the activity of an inactive protein kinase. |
| aging | A developmental process that is a deterioration and loss of function over time. Aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Aging includes cellular senescence, but is more inclusive. May precede death and may succeed developmental maturation (GO:0021700). |
| animal organ regeneration | The regrowth of a lost or destroyed animal organ. |
| apoptotic process | A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. |
| atrioventricular valve morphogenesis | The process in which the structure of the atrioventricular valve is generated and organized. |
| blood vessel development | The process whose specific outcome is the progression of a blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood. |
| brain development | The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.). |
| branching involved in blood vessel morphogenesis | The process of coordinated growth and sprouting of blood vessels giving rise to the organized vascular system. |
| bronchus morphogenesis | The process in which the bronchus is generated and organized. The bronchus is the portion of the airway that connects to the lungs. |
| cardiac left ventricle morphogenesis | The process in which the left cardiac ventricle is generated and organized. |
| cellular response to growth factor stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus. |
| common-partner SMAD protein phosphorylation | The process of introducing a phosphate group on to a common-partner SMAD protein. A common partner SMAD protein binds to pathway-restricted SMAD proteins forming a complex that translocates to the nucleus. |
| digestive tract development | The process whose specific outcome is the progression of the digestive tract over time, from its formation to the mature structure. The digestive tract is the anatomical structure through which food passes and is processed. |
| embryo implantation | Attachment of the blastocyst to the uterine lining. |
| embryonic cranial skeleton morphogenesis | The process in which the anatomical structures of the cranial skeleton are generated and organized during the embryonic phase. |
| embryonic hemopoiesis | The stages of blood cell formation that take place within the embryo. |
| endocardial cushion fusion | The cell-cell adhesion process of mesenchymal cardiac cushion cells that contributes to the process of cushion shaping. |
| gastrulation | A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm. |
| growth plate cartilage chondrocyte growth | The growth of a growth plate cartilage chondrocyte, where growth contributes to the progression of the chondrocyte over time from one condition to another. |
| heart development | The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. |
| heart looping | The tube morphogenesis process in which the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceding their future integration. Heart looping begins with dextral-looping and ends when the main regional divisions of the mature heart and primordium of the great arterial trunks become established preceeding septation. |
| in utero embryonic development | The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus. |
| inferior endocardial cushion morphogenesis | The developmental process by which an inferior endocardial cushion is generated and organized. |
| Langerhans cell differentiation | The process in which a precursor cell type acquires the specialized features of a Langerhans cell. |
| lens development in camera-type eye | The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus. |
| lens fiber cell apoptotic process | Any apoptotic process in a lens fiber cell. Lens fiber cells are elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye. |
| lung lobe morphogenesis | The process in which the anatomical structures of a lung lobe are generated and organized. A lung lobe is a projection that extends from the lung. |
| mammary gland morphogenesis | The process in which anatomical structures of the mammary gland are generated and organized. Morphogenesis refers to the creation of shape. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk. |
| membranous septum morphogenesis | The process in which the membranous septum is generated and organized. The membranous septum is the upper part of ventricular septum. |
| miRNA transport | The directed movement of microRNA (miRNA) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore. |
| myeloid dendritic cell differentiation | The process in which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin. |
| negative regulation of cardiac muscle cell proliferation | Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell proliferation. |
| Notch signaling pathway | The series of molecular signals initiated by an extracellular ligand binding to the receptor Notch on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. |
| outflow tract morphogenesis | The process in which the anatomical structures of the outflow tract are generated and organized. The outflow tract is the portion of the heart through which blood flows into the arteries. |
| outflow tract septum morphogenesis | The process in which the anatomical structures of the outflow tract septum are generated and organized. The outflow tract septum is a partition in the outflow tract. |
| pathway-restricted SMAD protein phosphorylation | The process of introducing a phosphate group on to a pathway restricted SMAD protein. A pathway restricted SMAD protein is an effector protein that acts directly downstream of the transforming growth factor family receptor. |
| peptidyl-serine phosphorylation | The phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine. |
| peptidyl-threonine phosphorylation | The phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine. |
| positive regulation of angiogenesis | Any process that activates or increases angiogenesis. |
| positive regulation of B cell tolerance induction | Any process that activates or increases the frequency, rate, or extent of B cell tolerance induction. |
| positive regulation of CD4-positive, alpha-beta T cell proliferation | Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell proliferation. |
| positive regulation of cell population proliferation | Any process that activates or increases the rate or extent of cell proliferation. |
| positive regulation of epithelial cell migration | Any process that activates or increases the frequency, rate or extent of epithelial cell migration. |
| positive regulation of epithelial to mesenchymal transition | Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. |
| positive regulation of epithelial to mesenchymal transition involved in endocardial cushion formation | Any process that activates or increases the frequency, rate or extent of epithelial to mesenchymal transition involved in endocardial cushion formation. |
| positive regulation of mesenchymal cell proliferation | The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells. |
| positive regulation of NK T cell differentiation | Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation. |
| positive regulation of pathway-restricted SMAD protein phosphorylation | Any process that increases the rate, frequency or extent of pathway-restricted SMAD protein phosphorylation. Pathway-restricted SMAD proteins and common-partner SMAD proteins are involved in the transforming growth factor beta receptor signaling pathways. |
| positive regulation of reactive oxygen species metabolic process | Any process that activates or increases the frequency, rate or extent of reactive oxygen species metabolic process. |
| positive regulation of skeletal muscle tissue regeneration | Any process that activates or increase the rate of skeletal muscle regeneration. |
| positive regulation of smooth muscle cell proliferation | Any process that activates or increases the rate or extent of smooth muscle cell proliferation. |
| positive regulation of T cell tolerance induction | Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction. |
| positive regulation of tolerance induction to self antigen | Any process that activates or increases the frequency, rate, or extent of tolerance induction to self antigen. |
| protein phosphorylation | The process of introducing a phosphate group on to a protein. |
| receptor-mediated endocytosis | An endocytosis process in which cell surface receptors ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles. |
| regulation of cell population proliferation | Any process that modulates the frequency, rate or extent of cell proliferation. |
| regulation of gene expression | Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). |
| regulation of stem cell proliferation | Any process that modulates the frequency, rate or extent of stem cell proliferation. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. |
| response to cholesterol | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cholesterol stimulus. |
| response to estrogen | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics. |
| response to glucose | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus. |
| response to hypoxia | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. |
| response to mechanical stimulus | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus. |
| response to nutrient | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus. |
| response to steroid hormone | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus. |
| response to xenobiotic stimulus | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a xenobiotic, a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical. |
| secondary palate development | The biological process whose specific outcome is the progression of the secondary palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The secondary palate is the part of the palate formed from the fusion of the two palatine shelves, extensions of the maxillary prominences. |
| smoothened signaling pathway | The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened. |
| trachea formation | The process pertaining to the initial formation of a trachea from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the trachea is recognizable. The trachea is the portion of the airway that attaches to the bronchi as it branches. |
| transforming growth factor beta receptor signaling pathway | The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. |
| tricuspid valve morphogenesis | The process in which the structure of the tricuspid valve is generated and organized. |
| vasculogenesis | The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes. |
| ventricular septum morphogenesis | The developmental process in which a ventricular septum is generated and organized. A ventricular septum is an anatomical structure that separates the lower chambers (ventricles) of the heart from one another. |
| wound healing | The series of events that restore integrity to a damaged tissue, following an injury. |
14 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q95126 | ACVR2B | Activin receptor type-2B | Bos taurus (Bovine) | PR |
| Q90670 | ACVR2B | Activin receptor type-2B | Gallus gallus (Chicken) | PR |
| Q90999 | TGFBR2 | TGF-beta receptor type-2 | Gallus gallus (Chicken) | PR |
| Q13705 | ACVR2B | Activin receptor type-2B | Homo sapiens (Human) | PR |
| Q8NER5 | ACVR1C | Activin receptor type-1C | Homo sapiens (Human) | PR |
| P36897 | TGFBR1 | TGF-beta receptor type-1 | Homo sapiens (Human) | PR |
| Q8K592 | Amhr2 | Anti-Muellerian hormone type-2 receptor | Mus musculus (Mouse) | PR |
| P27040 | Acvr2b | Activin receptor type-2B | Mus musculus (Mouse) | PR |
| Q62312 | Tgfbr2 | TGF-beta receptor type-2 | Mus musculus (Mouse) | PR |
| Q66T47 | ACVR2B | Activin receptor type-2B | Sus scrofa (Pig) | PR |
| P38445 | Acvr2b | Activin receptor type-2B | Rattus norvegicus (Rat) | PR |
| Q62893 | Amhr2 | Anti-Muellerian hormone type-2 receptor | Rattus norvegicus (Rat) | PR |
| P38438 | Tgfbr2 | TGF-beta receptor type-2 | Rattus norvegicus (Rat) | PR |
| P50488 | daf-4 | Cell surface receptor daf-4 | Caenorhabditis elegans | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGRGLLRGLW | PLHIVLWTRI | ASTIPPHVQK | SVNNDMIVTD | NNGAVKFPQL | CKFCDVRFST |
| 70 | 80 | 90 | 100 | 110 | 120 |
| CDNQKSCMSN | CSITSICEKP | QEVCVAVWRK | NDENITLETV | CHDPKLPYHD | FILEDAASPK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| CIMKEKKKPG | ETFFMCSCSS | DECNDNIIFS | EEYNTSNPDL | LLVIFQVTGI | SLLPPLGVAI |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SVIIIFYCYR | VNRQQKLSST | WETGKTRKLM | EFSEHCAIIL | EDDRSDISST | CANNINHNTE |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LLPIELDTLV | GKGRFAEVYK | AKLKQNTSEQ | FETVAVKIFP | YEEYASWKTE | KDIFSDINLK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| HENILQFLTA | EERKTELGKQ | YWLITAFHAK | GNLQEYLTRH | VISWEDLRKL | GSSLARGIAH |
| 370 | 380 | 390 | 400 | 410 | 420 |
| LHSDHTPCGR | PKMPIVHRDL | KSSNILVKND | LTCCLCDFGL | SLRLDPTLSV | DDLANSGQVG |
| 430 | 440 | 450 | 460 | 470 | 480 |
| TARYMAPEVL | ESRMNLENVE | SFKQTDVYSM | ALVLWEMTSR | CNAVGEVKDY | EPPFGSKVRE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| HPCVESMKDN | VLRDRGRPEI | PSFWLNHQGI | QMVCETLTEC | WDHDPEARLT | AQCVAERFSE |
| 550 | 560 | ||||
| LEHLDRLSGR | SCSEEKIPED | GSLNTTK |