P23738
Gene name |
Hdc |
Protein name |
Histidine decarboxylase |
Names |
HDC |
Species |
Mus musculus (Mouse) |
KEGG Pathway |
mmu:15186 |
EC number |
4.1.1.22: Carboxy-lyases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P23738
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P23738-F1 | Predicted | AlphaFoldDB |
40 variants for P23738
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| rs3388589511 | 5 | C>Y | No | EVA | |
| rs250863567 | 8 | R>C | No | EVA | |
| rs579916796 | 8 | R>H | No | EVA | |
| rs234313608 | 11 | R>C | No | EVA | |
| rs218733566 | 11 | R>H | No | EVA | |
| rs228158724 | 27 | Q>R | No | EVA | |
| rs3388590986 | 33 | R>G | No | EVA | |
| rs3388592196 | 66 | G>E | No | EVA | |
| rs3392151036 | 79 | W>GLCQ* | No | EVA | |
| rs3392230297 | 81 | S>N | No | EVA | |
| rs3392096513 | 81 | S>R | No | EVA | |
| rs3392124427 | 82 | P>T | No | EVA | |
| rs3392199832 | 85 | H>P | No | EVA | |
| rs3388586254 | 123 | E>V | No | EVA | |
| rs218873215 | 177 | K>T | No | EVA | |
| rs3388585178 | 179 | C>W | No | EVA | |
| rs3388583616 | 182 | D>E | No | EVA | |
| rs244567518 | 187 | S>F | No | EVA | |
| rs215145978 | 187 | S>T | No | EVA | |
| rs3388581396 | 209 | L>* | No | EVA | |
| rs3388587498 | 219 | P>T | No | EVA | |
| rs3388585198 | 249 | C>S | No | EVA | |
| rs3388582066 | 250 | A>G | No | EVA | |
| rs3388583648 | 251 | T>A | No | EVA | |
| rs3388592158 | 252 | L>F | No | EVA | |
| rs3388583638 | 274 | G>R | No | EVA | |
| rs3388591801 | 316 | V>I | No | EVA | |
| rs3388592191 | 334 | T>I | No | EVA | |
| rs3388589517 | 335 | F>S | No | EVA | |
| rs3388591042 | 359 | P>T | No | EVA | |
| rs27421579 | 389 | T>I | No | EVA | |
| rs262391697 | 390 | E>A | No | EVA | |
| rs3388588872 | 441 | F>L | No | EVA | |
| rs248150629 | 496 | N>D | No | EVA | |
| rs230475908 | 503 | G>V | No | EVA | |
| rs235579062 | 546 | P>L | No | EVA | |
| rs3388581773 | 554 | S>L | No | EVA | |
| rs3388588673 | 567 | S>F | No | EVA | |
| rs3412845472 | 632 | K>R | No | EVA | |
| rs3388585235 | 639 | V>D | No | EVA |
No associated diseases with P23738
1 regional properties for P23738
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| binding_site | Pyridoxal-phosphate binding site | 305 - 326 | IPR021115 |
Functions
| Description | ||
|---|---|---|
| EC Number | 4.1.1.22 | Carboxy-lyases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| dendrite | A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body. |
| neuronal cell body | The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| amino acid binding | Binding to an amino acid, organic acids containing one or more amino substituents. |
| carboxy-lyase activity | Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound. |
| histidine decarboxylase activity | Catalysis of the reaction: L-histidine = histamine + CO2. |
| identical protein binding | Binding to an identical protein or proteins. |
| pyridoxal phosphate binding | Binding to pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| catecholamine biosynthetic process | The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. |
| histamine biosynthetic process | The chemical reactions and pathways resulting in the formation of histamine, a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans. |
| histamine metabolic process | The chemical reactions and pathways involving histamine, a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans. |
| histidine catabolic process | The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid. |
| histidine metabolic process | The chemical reactions and pathways involving histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5EA83 | HDC | Histidine decarboxylase | Bos taurus (Bovine) | PR |
| P18486 | amd | 3,4-dihydroxyphenylacetaldehyde synthase | Drosophila melanogaster (Fruit fly) | PR |
| P05031 | Ddc | Aromatic-L-amino-acid decarboxylase | Drosophila melanogaster (Fruit fly) | PR |
| P19113 | HDC | Histidine decarboxylase | Homo sapiens (Human) | PR |
| P16453 | Hdc | Histidine decarboxylase | Rattus norvegicus (Rat) | PR |
| Q95ZS2 | tdc-1 | Tyrosine decarboxylase | Caenorhabditis elegans | PR |
| Q9M0G4 | TYRDC | Tyrosine decarboxylase 2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MMEPCEYREY | REYYRARGKE | MVDYISQYLS | TVRERQVTPN | VQPGYLRAQL | PASAPEEPDS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| WDSIFGDIER | VIMPGVVHWQ | SPHMHAYYPA | LTSWPSLLGD | MLADAINCLG | FTWASSPACT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ELEMNIMDWL | AKMLGLPEYF | LHHHPSSRGG | GVLQSTVSES | TLIALLAARK | NKILAMKACE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| PDANESSLNA | RLVAYTSDQA | HSSVEKAGLI | SLVKIRFLPV | DDNFSLRGEA | LQKAIEEDKQ |
| 250 | 260 | 270 | 280 | 290 | 300 |
| QGLVPVFVCA | TLGTTGVCAF | DRLSELGPIC | ASEGLWLHVD | AAYAGTAFLC | PELRGFLEGI |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EYADSFTFNP | SKWMMVHFDC | TGFWVKDKYK | LQQTFSVNPI | YLRHANSGAA | TDFMHWQIPL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| SRRFRSIKLW | FVIRSFGVKN | LQAHVRHGTE | MAKYFESLVR | SDPSFEIPAK | RHLGLVVFRL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| KGPNCLTESV | LKEIAKAGQL | FLIPATIQDK | LIIRFTVTSQ | FTTKEDILRD | WHLIQEAANL |
| 490 | 500 | 510 | 520 | 530 | 540 |
| VLSQHCTSQP | SPRAKNVIPP | PPGTRGLSLE | SVSEGGDDPA | QARKIIKQPG | ASLARREGGS |
| 550 | 560 | 570 | 580 | 590 | 600 |
| DLETMPDPFD | DCFSEEAPNT | TKHKLSSFLF | SYLSVQNRRK | TTRSLSCNSV | PMSAQKSLPA |
| 610 | 620 | 630 | 640 | 650 | 660 |
| DASLKNGGSF | RARIFSGFPE | QMMMMKKGAF | KKLIKFYSVP | SFPECSSQCA | RQLPCCPLEA |
| MV |