P11217
Gene name |
PYGM |
Protein name |
Glycogen phosphorylase, muscle form |
Names |
CD11 antigen-like family member B, CR-3 alpha chain, Cell surface glycoprotein MAC-1 subunit alpha, Leukocyte adhesion receptor MO1, Neutrophil adherence receptor, Myophosphorylase |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:5837 |
EC number |
2.4.1.1: Hexosyltransferases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for P11217
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 1Z8D | X-ray | 230 A | A | 1-842 | PDB |
| AF-P11217-F1 | Predicted | AlphaFoldDB |
893 variants for P11217
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs267606993 RCV000668678 RCV000144425 |
1 | M>L | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001244574 rs2058423391 |
1 | M>T | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000002399 RCV001579810 rs267606993 |
1 | M>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000726186 RCV001274029 rs374812974 CA6080395 |
3 | R>Q | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs199565370 CA6080396 RCV001105035 |
3 | R>W | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs772194378 RCV000409435 |
5 | L>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs886048464 CA10631142 RCV000312915 |
8 | Q>K | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000706083 rs770037766 |
10 | K>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs145881639 RCV001274028 CA6080380 COSM467210 RCV000726775 |
21 | G>S | kidney Glycogen storage disease, type V [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000396772 rs140731551 RCV000399009 CA10606633 |
22 | V>M | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1555136828 RCV000666086 |
23 | E>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001008110 RCV000169106 rs755117847 |
27 | E>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
CA10638975 rs886048463 RCV000290610 |
33 | N>S | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1394188143 RCV001205755 CA381112838 |
36 | L>R | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs2058422018 RCV001244443 |
38 | F>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001051694 rs2058421657 |
43 | D>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002519132 CA6080365 RCV000280338 rs567482511 |
44 | R>H | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000002388 CA222884 rs116987552 RCV000081306 RCV001730469 RCV000622729 RCV002251857 |
50 | R>* | Glycogen storage disease, type V Muscular atrophy Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002564046 rs758175735 RCV001242840 CA6080358 |
50 | R>Q | Glycogen storage disease, type V Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
| VAR_085195 | 50 | R>del | GSD5 [UniProt] | Yes | UniProt |
|
RCV000033140 CA261238 rs397514631 |
51 | D>G | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000033141 rs1325298827 |
53 | Y>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1325298827 RCV000674546 |
53 | Y>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000761777 rs148839812 RCV002536375 CA6080357 RCV000785674 RCV000703766 |
54 | F>V | Glycogen storage disease, type V Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs780193588 RCV001216334 |
55 | A>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000693856 COSM930191 rs765962705 CA6080352 |
60 | V>M | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V endometrium [NCI-TCGA, ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA238832 RCV000173380 RCV000828466 rs145514333 RCV000664912 |
61 | R>H | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001277996 rs149658961 CA6080349 |
65 | V>M | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs750857876 RCV000665175 |
67 | R>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1057516349 RCV000411559 CA16041507 |
68 | W>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000489454 CA6080344 RCV001272370 rs765844107 |
70 | R>C | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000409722 rs1057517361 CA16041506 |
73 | Q>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000669604 rs1555136752 |
74 | H>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000412395 rs1057516329 |
84 | Y>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000412392 rs1057517145 CA16041505 |
84 | Y>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000409457 rs1057516629 |
85 | Y>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
CA345696 rs527236146 RCV000128551 |
85 | Y>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000664848 rs1555136540 |
88 | L>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001540069 CA6080314 RCV000557171 rs370247862 |
94 | R>W | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA6080306 rs147571836 RCV001277995 |
113 | T>I | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
CA6080276 VAR_014002 rs776680924 RCV000666659 |
116 | L>P | Glycogen storage disease, type V GSD5 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV001277994 rs759361512 CA6080277 |
116 | L>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000668184 rs1555136459 CA381109873 |
124 | E>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001103122 CA6080273 RCV000994653 rs200430286 |
130 | A>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs2058409644 RCV001309764 |
131 | G>R | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000722868 RCV000821091 rs1565538121 |
132 | L>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
CA6080270 CA381109644 RCV000761339 rs780246932 |
135 | G>R | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs786204723 RCV000169547 |
136 | G>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
CA223888331 rs367990192 RCV000671584 |
139 | R>W | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000411763 rs1057517400 |
149 | A>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs753687960 CA6080243 RCV001277993 |
155 | A>T | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001304660 rs2058407754 |
157 | G>D | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000671611 CA6080241 rs760654579 RCV002282315 |
159 | G>R | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000666983 rs200038732 CA6080240 |
161 | R>C | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs760531401 CA6080237 RCV001064694 |
168 | N>H | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA6080233 RCV000812757 rs141265458 RCV000523818 |
173 | G>R | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000673149 CA381108786 rs1555136375 |
174 | G>D | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs2058407169 RCV001047414 |
175 | W>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001201547 rs747495987 CA6080231 |
176 | Q>P | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA6080209 rs551666681 RCV000377529 |
181 | D>N | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs604595 RCV000128546 CA345690 |
188 | N>K | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001531738 rs77656150 CA148399 RCV000960580 RCV000081314 |
193 | A>S | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs376581557 CA6080199 RCV001239256 RCV001751473 VAR_014003 |
194 | R>W | Glycogen storage disease, type V GSD5 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC dbSNP gnomAD |
|
CA6080197 rs773595572 RCV000320655 |
197 | F>L | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000414632 VAR_003431 rs119103251 CA339962 RCV000002389 |
205 | G>S | Glycogen storage disease, type V GSD5 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001829517 CA6080188 rs371343340 RCV000520440 |
206 | H>Q | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001277992 rs753533515 CA6080180 RCV001508673 |
220 | Q>K | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA6080160 RCV001277990 rs772025653 |
223 | L>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs2058388882 RCV001068074 |
228 | D>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001242320 CA381180260 rs1312195500 |
243 | R>H | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP |
|
CA6080138 rs779706675 RCV000695186 |
245 | W>C | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
CA381180231 RCV000669374 rs1555135785 |
246 | S>P | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs143071876 RCV000259737 CA6080133 |
251 | N>S | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs115690781 RCV001108320 CA6080114 RCV000521120 |
259 | N>S | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000169167 CA274003 RCV000627209 rs767739769 |
270 | R>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs768576604 RCV000658597 RCV001277988 CA6080108 |
273 | A>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000370261 rs114468011 CA234752 RCV000723895 |
283 | N>S | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_014004 rs780375860 RCV002469240 RCV000666175 CA6080080 |
292 | L>P | Glycogen storage disease, type V GSD5; rare mutation [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000522784 RCV002229955 rs558267822 CA6080079 RCV000313797 |
293 | R>W | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001280478 CA6080075 rs778061067 |
310 | R>C | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs759130375 RCV001281578 RCV002537920 CA6080074 |
310 | R>H | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA6080063 CA381178577 RCV001044179 rs770104418 |
323 | V>L | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001241614 RCV003166506 rs758682386 CA6080056 |
328 | D>H | Glycogen storage disease, type V Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000791057 rs1592412131 |
349 | E>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_014005 | 349 | E>K | GSD5 [UniProt] | Yes | UniProt |
|
CA275527 RCV000723508 RCV001822854 rs116135678 RCV000185576 |
365 | A>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001280477 rs1592411804 |
376 | T>A | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000672453 CA223900777 rs954192338 |
377 | N>Y | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000494108 RCV001036939 rs757681143 CA6079985 |
383 | E>K | Glycogen storage disease, type V Variant assessed as Somatic; 5.085e-05 impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1465752595 CA381176666 RCV000671988 |
384 | A>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000368305 rs200357590 CA6079984 RCV001086488 |
387 | R>H | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001242446 rs2058376262 |
388 | W>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001280476 rs2058376345 |
388 | W>C | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs759336535 RCV000785120 CA6079978 |
392 | L>P | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000173815 rs71581787 RCV000675638 RCV000306631 CA200729 |
395 | T>M | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA252202 rs119103254 RCV000002394 |
396 | L>P | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1005687078 CA223900711 RCV001062130 RCV001557247 VAR_003432 |
397 | L>P | Glycogen storage disease, type V GSD5 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
COSM3356228 rs773204705 CA6079975 RCV000667688 |
398 | P>L | Glycogen storage disease, type V haematopoietic_and_lymphoid_tissue [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC dbSNP gnomAD |
|
rs548646628 RCV000398154 CA6079972 |
399 | R>Q | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001207539 rs2058375583 |
400 | H>Y | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV003133295 RCV000512889 rs757762621 CA6079967 |
406 | E>D | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs781394907 RCV001280475 CA6079968 |
406 | E>K | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs142054672 RCV000675637 RCV001079321 CA239269 |
413 | N>Y | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs11231866 CA148392 VAR_061198 RCV000081303 RCV000128547 RCV000675636 |
414 | R>G | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA6079939 rs767347157 COSM1509544 RCV001280474 |
416 | A>V | lung Glycogen storage disease, type V [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC dbSNP gnomAD |
|
CA381176063 RCV001579119 RCV000597525 CA6079931 rs372851103 |
424 | D>E | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ESP ExAC TOPMed gnomAD ClinVar dbSNP |
|
rs750700202 COSM1509545 CA223900355 RCV000670645 |
428 | R>C | lung Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [Cosmic, NCI-TCGA, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1212604 CA345692 RCV000128548 |
430 | S>L | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1555135069 RCV000670975 |
438 | K>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002543428 RCV001849247 CA6079917 rs758774720 |
439 | R>C | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA6079913 RCV000281232 RCV000483076 rs568496266 |
447 | I>L | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
rs749358752 RCV002525220 RCV001829516 RCV000675635 CA6079911 |
448 | A>T | Glycogen storage disease, type V Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs370291854 CA239582 RCV001104930 RCV000174112 |
448 | A>V | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP NCI-TCGA TOPMed dbSNP gnomAD |
|
CA6079910 rs769172044 RCV001275777 RCV000657906 |
449 | G>R | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA6079907 rs756251887 RCV000671505 RCV000338366 RCV001778878 |
450 | S>L | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA6079901 rs151213354 RCV000793021 RCV002535881 |
453 | V>I | Glycogen storage disease, type V Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs398124208 CA222880 RCV000790687 RCV000169330 |
456 | V>M | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA6079893 RCV001104929 rs377371768 |
459 | I>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs769805782 CA6079889 RCV001280473 |
462 | E>K | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001053055 rs758131128 CA6079857 RCV000478747 |
478 | H>R | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
RCV001566705 CA6079856 rs750032282 RCV000691441 RCV003163152 |
479 | K>R | Glycogen storage disease, type V Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
VAR_014006 CA381175087 RCV000670812 rs1555134900 |
488 | T>N | Glycogen storage disease, type V GSD5 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA222882 RCV000081305 RCV001047041 rs398124209 |
489 | P>R | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs752622662 RCV000675078 CA6079853 RCV000480329 |
489 | P>S | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs886041476 RCV001387933 RCV000341453 |
490 | R>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001233784 rs2058367842 |
493 | L>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002069314 CA6079821 rs575153481 RCV001247938 |
507 | R>H | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001214599 rs2058363821 |
511 | D>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1057516612 RCV000409188 |
511 | D>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs139570786 RCV000509394 RCV001849178 RCV000675632 CA240092 |
513 | I>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001063010 rs2058363627 |
516 | L>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs200481790 CA6079811 RCV001103029 |
520 | R>C | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1592410003 CA381173882 RCV000805625 |
521 | K>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA252211 RCV000002400 rs119103257 |
541 | E>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
VAR_003433 RCV000002390 CA339963 rs119103252 RCV000723828 |
543 | K>T | Glycogen storage disease, type V GSD5 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001063572 rs1311913891 |
553 | E>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000409547 rs1057516259 |
561 | N>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
COSM1322266 rs377225525 RCV000995849 CA6079775 RCV001823175 |
570 | R>W | ovary Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [Cosmic, NCI-TCGA, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs752848974 RCV000410338 CA6079772 |
573 | E>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000002404 RCV001091630 CA252213 rs119103260 |
574 | Y>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP ClinGen ESP TOPMed |
|
rs786200874 RCV000002398 |
575 | K>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000778335 rs1315020035 CA381170544 |
575 | K>E | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000002397 COSM1222834 RCV000578544 rs119103255 CA252206 |
576 | R>* | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V large_intestine [NCI-TCGA, ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000988571 rs1592409633 |
579 | L>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1592409631 RCV000991439 |
581 | C>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001103028 rs760543538 CA6079768 |
583 | H>R | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA6079765 RCV001202839 rs761438921 |
587 | L>P | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001242319 RCV002564023 rs140016055 CA6079762 |
589 | N>S | Glycogen storage disease, type V Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs150622626 RCV001103026 RCV000675629 CA6079735 |
596 | N>S | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs769960481 RCV000169141 |
599 | F>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002221250 rs373190458 RCV000779073 CA6079730 COSM689678 RCV000727737 |
602 | R>Q | lung Glycogen storage disease, type V [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA6079731 VAR_014007 rs750195683 |
602 | R>W | GSD5 [UniProt] | Yes |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV003129885 RCV000523949 rs1419658107 CA381169451 |
612 | P>A | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001103025 rs142008108 RCV001355325 CA6079693 |
620 | I>T | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001722323 RCV000245345 RCV000296404 CA6079690 rs143217651 |
624 | V>I | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002532359 RCV000596502 CA6079683 RCV000837922 RCV001088368 rs115347245 |
630 | V>M | Glycogen storage disease, type V Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000797617 CA381168926 rs1592409000 |
639 | D>Y | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000384511 RCV001280469 CA6079677 rs771016457 |
640 | R>C | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs116180923 CA6079674 RCV002519079 RCV000657929 RCV001088058 RCV000319373 |
642 | R>C | Glycogen storage disease, type V Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs150098198 RCV000519020 RCV002527593 RCV001271475 CA6079673 |
642 | R>H | Glycogen storage disease, type V Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs2058354383 RCV001239494 |
650 | R>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs114073621 RCV000498994 CA6079669 |
650 | R>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP |
|
CA222886 RCV002227444 rs61736659 RCV000763760 RCV000723589 |
653 | L>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA252200 RCV000002392 rs119103253 VAR_003434 |
655 | E>K | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V GSD5 [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA dbSNP gnomAD |
| VAR_014008 | 660 | A>D | GSD5 [UniProt] | Yes | UniProt |
|
RCV000002393 CA252201 VAR_014009 rs119103256 |
666 | Q>E | Glycogen storage disease, type V GSD5 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
RCV000175189 RCV001091629 rs113806080 RCV000988570 CA201342 |
670 | A>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002546261 RCV001328499 rs2058348746 |
674 | A>T | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002516665 CA240894 RCV000175191 rs794727189 |
675 | S>L | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs755716626 RCV001108217 CA6079653 |
678 | G>S | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1309230359 CA381167992 RCV001280468 |
683 | M>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA381167979 RCV000790369 rs1592408348 |
685 | N>H | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_014010 | 685 | N>Y | GSD5 [UniProt] | Yes | UniProt |
|
VAR_014011 RCV000002396 CA252204 RCV001091628 rs144081869 |
686 | G>R | Glycogen storage disease, type V GSD5 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
| VAR_014012 | 687 | A>P | GSD5 [UniProt] | Yes | UniProt |
|
RCV000988569 rs1592408302 |
692 | T>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs200688234 RCV001574604 RCV000695169 CA6079645 |
693 | M>T | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs773543072 RCV001267843 |
694 | D>E | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000815465 CA6079643 rs768604948 |
695 | G>R | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs984250045 RCV001280467 CA223897759 |
703 | E>K | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA381167696 rs1483102315 VAR_014013 RCV001204475 |
704 | A>V | Glycogen storage disease, type V GSD5 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
| VAR_014014 | 709 | F>del | GSD5; common in Japanese patients [UniProt] | Yes | UniProt |
|
RCV000128553 rs527236147 |
710 | F>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1057517067 RCV000410560 |
713 | G>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
CA381167557 RCV000670902 rs780656375 |
715 | R>W | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs2058321851 RCV001220462 |
728 | N>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001280465 rs200058475 CA6079607 |
728 | N>D | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001211508 CA6079603 rs140102591 |
733 | Y>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
COSM1355760 CA6079600 RCV001280464 rs760277933 |
735 | R>H | Glycogen storage disease, type V large_intestine Variant assessed as Somatic; 4.62e-05 impact. [ClinVar, Cosmic, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1057517058 RCV000411646 |
744 | E>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs758842259 RCV000669349 |
751 | F>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1565531453 RCV001246104 |
754 | K>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000175318 RCV000081311 rs398124210 |
754 | K>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001222438 rs2058320138 |
755 | Q>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001060397 CA6079584 rs754822104 |
760 | K>Q | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs75685607 CA6079580 RCV001423332 RCV002298792 RCV000828467 |
762 | I>M | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA6079579 rs190548494 RCV001551241 RCV000274335 |
764 | N>D | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000283436 rs369382075 RCV003133207 CA6079571 |
771 | R>G | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000669086 CA6079570 COSM2164156 rs150911354 RCV000493384 |
771 | R>Q | Glycogen storage disease, type V haematopoietic_and_lymphoid_tissue [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs369382075 CA6079572 RCV000366581 |
771 | R>W | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001105987 rs2058315823 |
773 | K>N | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1462767117 RCV000668989 |
774 | V>missing | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001508669 rs1057517001 RCV000409053 CA16041493 |
784 | C>* | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001339896 rs2058315104 |
791 | L>F | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
rs757292296 CA6079543 RCV000808053 |
792 | Y>C | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001653505 CA6079525 rs577589879 RCV000270920 |
797 | E>Q | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP |
|
RCV000081312 CA6079524 RCV000631182 RCV000002402 CA222889 rs119103258 VAR_014015 |
798 | W>R | Glycogen storage disease, type V GSD5 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV001105985 CA6079522 rs377401213 |
799 | T>M | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA6079520 RCV000363298 rs759260599 |
800 | R>W | Variant assessed as Somatic; 0.0 impact. Glycogen storage disease, type V [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
RCV001226356 rs1213033233 CA381163422 |
813 | S>P | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
COSM1161006 RCV001855083 RCV000763759 RCV000321977 CA6079510 rs143177272 RCV002518814 |
816 | R>C | Glycogen storage disease, type V large_intestine haematopoietic_and_lymphoid_tissue Inborn genetic diseases [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000675627 RCV000081313 CA222890 rs139230055 RCV001104843 |
816 | R>H | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000399460 CA10635242 rs886048460 |
817 | T>N | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs747567834 RCV000824381 CA381163090 |
822 | A>D | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA6079501 RCV001222199 rs757670205 |
832 | R>C | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001104842 rs2058310112 |
839 | D>V | Glycogen storage disease, type V [ClinVar] | Yes |
ClinVar dbSNP |
|
CA16041492 rs1057516529 RCV000409749 |
843 | I>L | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA381162327 CA381162326 rs1400353740 RCV000674827 |
843 | I>R | Glycogen storage disease, type V [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA6080394 rs752266996 |
4 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6080392 rs764749317 |
6 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 11 | R>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6080388 rs772411515 |
12 | K>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 14 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1388586019 CA381113230 |
14 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1032877990 CA223889439 |
15 | S>G | No |
ClinGen TOPMed |
|
|
rs375188510 CA6080387 |
16 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs555856016 CA223889435 |
16 | V>M | No |
ClinGen 1000Genomes |
|
|
CA6080386 rs774650561 |
17 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6080384 rs148159796 |
17 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1196742852 CA381113117 |
19 | L>P | No |
ClinGen gnomAD |
|
|
CA6080383 rs535560622 |
19 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6080382 rs775674324 |
20 | A>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1403210693 CA381113068 |
23 | E>D | No |
ClinGen TOPMed |
|
|
rs760855386 CA223889409 |
23 | E>G | No |
ClinGen Ensembl |
|
|
rs146845353 CA6080377 |
25 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381113026 rs777515712 |
26 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs777515712 CA6080376 |
26 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA381112997 rs1305717617 |
27 | E>G | No |
ClinGen TOPMed |
|
|
CA381113014 rs1434873172 |
27 | E>K | No |
ClinGen gnomAD |
|
|
rs1592417170 CA381112990 |
28 | L>M | No |
ClinGen Ensembl |
|
|
CA6080373 rs764779249 |
30 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs753484236 CA6080371 |
34 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs531748591 CA6080372 |
34 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381112828 rs1170598133 |
37 | H>R | No |
ClinGen gnomAD |
|
|
CA381112808 rs1478945166 |
38 | F>L | No |
ClinGen gnomAD |
|
|
rs762103405 CA6080369 |
39 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA223889352 rs897159798 |
39 | T>I | No |
ClinGen Ensembl |
|
|
CA6080367 rs764465584 |
41 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6080366 rs763488434 |
44 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA6080364 rs769985937 |
45 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381112570 rs1565538897 |
48 | T>A | No |
ClinGen Ensembl |
|
|
rs368649966 CA6080359 |
49 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1420873872 CA381112494 |
52 | Y>D | No |
ClinGen Ensembl |
|
|
rs375646075 CA6080356 |
54 | F>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381112419 rs1331894446 |
55 | A>T | No |
ClinGen gnomAD |
|
|
rs1416006850 CA381112348 COSM1746445 |
58 | H>R | urinary_tract [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA6080354 rs754417088 |
59 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs754417088 CA381112319 |
59 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA381112285 rs1413461008 |
61 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1413461008 CA381112288 |
61 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1592416979 CA381112221 |
63 | H>L | No |
ClinGen Ensembl |
|
|
CA381112196 rs1208434944 |
65 | V>E | No |
ClinGen gnomAD |
|
|
rs149658961 CA6080350 |
65 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6080348 rs763289422 |
66 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA6080345 rs957181304 |
67 | R>C | No |
ClinGen TOPMed |
|
|
rs371357163 CA223889220 |
67 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA gnomAD |
|
rs765844107 CA381112063 |
70 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759631990 CA381112055 |
70 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6080343 rs759631990 |
70 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759631990 CA381112056 |
70 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 70 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs377713922 CA6080342 |
71 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381111987 rs1182739938 |
73 | Q>H | No |
ClinGen TOPMed |
|
|
CA6080340 rs760927188 |
73 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA381111974 rs1450912823 |
74 | H>R | No |
ClinGen TOPMed |
|
|
CA381111977 rs1248467384 |
74 | H>Y | No |
ClinGen TOPMed |
|
|
rs773361937 CA6080339 |
75 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs1449944847 CA381111939 |
75 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA381111949 rs1349100815 |
75 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1466112694 CA381111915 |
76 | Y>F | No |
ClinGen TOPMed |
|
|
rs1025481959 CA223889195 |
79 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs771895781 CA6080338 |
81 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA6080320 rs761616685 |
83 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6080319 rs774159335 |
84 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA381111592 rs1344134587 |
84 | Y>H | No |
ClinGen gnomAD |
|
|
rs373310140 CA6080318 |
85 | Y>H | No |
ClinGen ESP ExAC gnomAD |
|
|
CA381111424 rs1435533547 |
92 | M>V | No |
ClinGen gnomAD |
|
|
rs1085307918 CA381111386 RCV000489939 |
93 | G>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA6080313 rs375233791 |
95 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs917916740 CA223888552 |
97 | Q>* | No |
ClinGen TOPMed |
|
|
CA381111274 rs1169625293 |
97 | Q>H | No |
ClinGen gnomAD |
|
|
CA6080311 rs780840197 |
100 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs528545908 CA381111210 |
100 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6080312 rs528545908 |
100 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381111162 rs1427813602 |
103 | L>Q | No |
ClinGen TOPMed |
|
|
rs1032965056 CA223888544 |
104 | A>S | No |
ClinGen Ensembl |
|
|
rs935327691 CA223888541 |
106 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA381111005 rs1251356910 |
110 | D>G | No |
ClinGen gnomAD |
|
|
CA6080308 rs779392056 |
111 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381110941 rs1592415865 |
113 | T>P | No |
ClinGen Ensembl |
|
|
CA381110893 rs1310345038 |
115 | Q>E | No |
ClinGen gnomAD |
|
|
CA223888502 rs879158851 |
115 | Q>L | No |
ClinGen gnomAD |
|
|
CA381110890 rs879158851 |
115 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 119 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1230252473 CA381109951 |
120 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs374898083 CA6080274 |
120 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA223888373 rs886943655 |
120 | M>V | No |
ClinGen TOPMed |
|
|
rs1319212857 CA381109915 |
122 | E>* | No |
ClinGen gnomAD |
|
|
CA381109910 rs1320036556 |
122 | E>G | No |
ClinGen gnomAD |
|
|
CA381109862 rs1592415687 |
125 | E>K | No |
ClinGen Ensembl |
|
|
CA381109831 rs1592415683 |
126 | I>T | No |
ClinGen Ensembl |
|
|
CA381109787 rs1383044080 |
128 | E>G | No |
ClinGen TOPMed |
|
|
rs1306098829 CA381109803 |
128 | E>K | No |
ClinGen TOPMed |
|
|
rs1385683915 CA381109734 |
130 | A>S | No |
ClinGen gnomAD |
|
|
CA381109708 rs1358136040 |
131 | G>A | No |
ClinGen TOPMed |
|
|
rs1085308021 CA381109682 RCV000489796 |
133 | G>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA381109650 rs372262267 |
134 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs780246932 CA381109641 |
135 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1246112610 CA381109629 |
136 | G>S | No |
ClinGen gnomAD |
|
|
CA6080269 rs756547364 |
136 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381109607 rs1592415587 |
137 | L>M | No |
ClinGen Ensembl |
|
|
rs1592415581 CA381109605 |
137 | L>Q | No |
ClinGen Ensembl |
|
|
rs367990192 CA6080265 |
139 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777926738 CA381109575 |
139 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs777926738 CA6080264 |
139 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA381109554 rs1341970396 |
141 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA223888322 rs112384150 |
141 | A>V | No |
ClinGen Ensembl |
|
|
rs758650710 CA6080263 |
142 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA381109363 rs779198403 |
147 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA6080245 rs779198403 |
147 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA381109358 rs1409331279 |
148 | M>V | No |
ClinGen gnomAD |
|
| TCGA novel | 149 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1029208168 CA223888207 |
149 | A>V | No |
ClinGen Ensembl |
|
|
CA381109309 rs1368981072 |
150 | T>A | No |
ClinGen gnomAD |
|
|
CA6080244 rs145285313 |
152 | G>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA223888185 rs933845688 |
156 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA223888189 rs976337682 |
156 | Y>N | No |
ClinGen TOPMed gnomAD |
|
|
CA381109134 rs766020669 |
158 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381109099 rs1592415404 |
160 | I>V | No |
ClinGen Ensembl |
|
|
rs1471375354 CA381109058 |
161 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA381109023 rs1253584213 |
163 | E>A | No |
ClinGen gnomAD |
|
| TCGA novel | 167 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761451188 CA6080238 |
167 | F>L | No |
ClinGen ExAC |
|
|
RCV000597743 rs1555136390 |
168 | N>* | No |
ClinVar dbSNP |
|
|
CA381108884 rs1278522566 |
169 | Q>E | No |
ClinGen gnomAD |
|
|
rs1198128007 CA381108856 |
170 | K>E | No |
ClinGen gnomAD |
|
|
rs141265458 CA6080234 |
173 | G>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6080214 rs773648975 |
177 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6080213 rs773648975 |
177 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6080212 rs772653455 |
179 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748134029 CA6080211 |
179 | E>V | No |
ClinGen ExAC |
|
|
CA381108021 rs1223885403 |
183 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA6080208 rs749507354 |
185 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6080207 rs780489639 |
185 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381107996 rs749507354 |
185 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755904043 CA6080206 |
186 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA6080203 rs757251754 |
187 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757251754 CA6080204 |
187 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1365127902 CA381107956 |
188 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs751492787 CA6080202 |
189 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1247889064 CA381107933 |
190 | W>R | No |
ClinGen gnomAD |
|
|
rs149597150 CA6080201 |
192 | K>N | No |
ClinGen ESP ExAC gnomAD |
|
|
CA381107856 rs1226003414 |
193 | A>D | No |
ClinGen gnomAD |
|
|
rs115259855 CA6080198 |
194 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs773595572 CA381107772 |
197 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381107756 rs767808700 |
198 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA6080195 rs762354482 |
198 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767808700 CA6080196 |
198 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs774777447 CA6080194 |
202 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs951044802 CA223887911 |
204 | Y>C | No |
ClinGen Ensembl |
|
|
rs375724338 COSM194067 CA6080190 |
205 | G>D | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6080187 rs746956492 |
210 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA6080183 rs532529860 |
214 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381180642 rs1592413474 |
221 | V>G | No |
ClinGen Ensembl |
|
|
CA223901719 rs139020880 |
221 | V>L | No |
ClinGen ESP gnomAD |
|
|
CA381180633 rs1178655026 |
222 | V>E | No |
ClinGen gnomAD |
|
|
rs777710532 CA6080161 |
222 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA6080159 rs370712943 |
225 | M>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs150232968 CA223901711 |
228 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs150232968 CA6080154 |
228 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6080155 rs150232968 |
228 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs751890543 COSM930187 CA6080153 |
229 | T>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs763524554 CA381180471 CA381180472 |
231 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6080151 rs763524554 |
231 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs753306635 CA381180450 |
232 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs753306635 CA6080150 |
232 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA6080148 rs373533637 |
235 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373533637 CA223901692 |
235 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371247639 CA223901684 |
235 | R>H | No |
ClinGen ESP TOPMed |
|
|
rs776850635 CA6080147 |
237 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA6080146 rs771073706 |
237 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1478496014 CA381180328 |
238 | V>D | No |
ClinGen TOPMed |
|
|
CA6080143 rs771899003 |
242 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA381180283 rs1387928557 |
242 | M>V | No |
ClinGen gnomAD |
|
|
CA6080142 rs141055359 |
243 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs768087596 CA6080140 |
244 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs772602509 CA223901631 |
246 | S>F | No |
ClinGen Ensembl |
|
|
rs778261564 CA6080136 |
247 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA6080135 rs778261564 |
247 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs758890963 CA6080134 |
249 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1485980428 CA381180162 |
249 | A>V | No |
ClinGen gnomAD |
|
|
CA381180125 rs1565536682 |
251 | N>D | No |
ClinGen Ensembl |
|
|
rs748653220 CA223901616 |
251 | N>K | No |
ClinGen Ensembl |
|
|
CA6080131 rs149067043 |
254 | N>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6080132 rs149067043 |
254 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1345108981 CA381180032 |
255 | L>F | No |
ClinGen TOPMed |
|
|
CA223901608 rs931845689 |
257 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs779515778 CA6080115 |
258 | F>C | No |
ClinGen ExAC gnomAD |
|
|
rs983163363 CA223901552 |
260 | V>I | No |
ClinGen TOPMed |
|
|
CA223901548 rs1027416437 |
261 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1592413122 CA381179791 |
266 | A>G | No |
ClinGen Ensembl |
|
|
CA6080111 rs756281352 |
267 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756281352 CA6080112 |
267 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6080109 rs761545001 |
270 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs768576604 CA223901528 |
273 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1436900766 CA381179651 |
274 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA381179607 rs1198004865 |
276 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA6080106 rs762779955 |
278 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6080105 rs775556109 |
278 | R>H | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs779003186 CA223901504 |
279 | V>F | No |
ClinGen gnomAD |
|
|
CA6080104 rs755084929 |
283 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs776369912 CA6080103 |
285 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA381179414 rs1592413056 |
285 | N>T | No |
ClinGen Ensembl |
|
|
rs760388780 CA6080084 |
286 | F>I | No |
ClinGen ExAC gnomAD |
|
|
CA6080083 rs577937797 |
286 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs371208037 CA381179256 |
288 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371208037 CA6080081 |
288 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs371208037 CA381179257 |
288 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6080078 rs746412712 |
293 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1358384674 CA381179087 |
297 | E>K | No |
ClinGen gnomAD |
|
|
rs1358384674 CA381179076 |
297 | E>Q | No |
ClinGen gnomAD |
|
|
CA381179010 CA381179009 rs757387408 |
300 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6080076 rs757387408 |
300 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1034211898 CA223901213 |
301 | V>A | No |
ClinGen Ensembl |
|
|
rs1314271741 CA381179003 |
301 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1269053260 CA381178975 |
302 | A>G | No |
ClinGen gnomAD |
|
|
CA381178967 rs1428091238 |
303 | A>P | No |
ClinGen gnomAD |
|
|
rs1592412640 CA381178958 |
304 | T>P | No |
ClinGen Ensembl |
|
|
rs759130375 CA381178827 |
310 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6080073 rs752563477 |
311 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147851780 CA6080072 |
311 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1446923834 CA381178744 |
314 | S>T | No |
ClinGen gnomAD |
|
|
rs1592412583 CA381178688 |
317 | F>S | No |
ClinGen Ensembl |
|
|
rs759517845 CA6080071 |
317 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA6080069 rs368077182 |
318 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs1444543008 CA381178651 |
319 | C>Y | No |
ClinGen TOPMed |
|
|
rs1243928315 CA381178634 |
320 | R>C | No |
ClinGen gnomAD |
|
|
COSM3953631 rs139578482 CA6080068 |
320 | R>H | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs150569465 CA6080066 |
322 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381178583 rs1474881760 |
322 | P>L | No |
ClinGen gnomAD |
|
|
rs1294857389 CA381178567 |
323 | V>A | No |
ClinGen gnomAD |
|
|
CA381178578 rs770104418 |
323 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA223901181 rs141889634 |
324 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA6080061 rs139645637 |
324 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs141889634 CA6080062 |
324 | R>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1183419124 CA381178551 |
325 | T>A | No |
ClinGen TOPMed |
|
|
rs536561941 CA6080059 |
325 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs758682386 CA381178484 |
328 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381178464 rs1350959154 |
329 | A>T | No |
ClinGen gnomAD |
|
|
CA381178452 rs1474312387 |
329 | A>V | No |
ClinGen TOPMed |
|
|
rs893148729 CA223901178 |
332 | D>N | No |
ClinGen TOPMed |
|
|
rs1408714785 CA381178331 |
333 | K>N | No |
ClinGen gnomAD |
|
|
CA6080032 rs756085033 |
334 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1233430644 CA381177307 |
334 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1233430644 CA381177310 |
334 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA381177283 rs1320723096 |
335 | A>V | No |
ClinGen gnomAD |
|
|
rs1223701129 CA381177246 |
337 | Q>R | No |
ClinGen gnomAD |
|
|
rs1306708756 CA381177227 |
339 | N>Y | No |
ClinGen gnomAD |
|
|
CA381177209 rs1222462807 |
340 | D>N | No |
ClinGen gnomAD |
|
|
CA381177143 rs1271567783 |
344 | S>A | No |
ClinGen TOPMed |
|
|
rs751157254 CA6080028 |
344 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751157254 CA381177140 |
344 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1338817779 CA381177117 |
346 | A>D | No |
ClinGen gnomAD |
|
|
rs1403917132 CA381177122 |
346 | A>T | No |
ClinGen gnomAD |
|
|
CA381177102 rs1475448146 |
347 | I>M | No |
ClinGen TOPMed |
|
|
CA381177077 rs1391890581 |
350 | L>V | No |
ClinGen TOPMed |
|
|
rs759846298 CA6080026 |
352 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs772118747 CA6080021 |
358 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1030163168 CA223900998 |
359 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs761807664 CA6080020 |
359 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6080019 rs774663305 |
361 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| rs1370804680 | 365 | A>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1477931501 CA381176893 |
366 | W>* | No |
ClinGen gnomAD |
|
|
CA381176898 rs1194723619 |
366 | W>* | No |
ClinGen gnomAD |
|
|
rs770807547 CA6079994 |
369 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1216282513 CA679273843 |
369 | T>M | No |
ClinGen TOPMed |
|
|
CA381176843 rs1489979834 |
370 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1199148288 CA381176847 |
370 | V>M | No |
ClinGen gnomAD |
|
|
rs1339328996 CA381176816 |
372 | T>I | No |
ClinGen gnomAD |
|
|
rs1592411831 CA381176823 |
372 | T>P | No |
ClinGen Ensembl |
|
|
CA381176810 rs537956139 |
373 | C>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs985454554 CA223900796 |
373 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs537956139 CA6079991 |
373 | C>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs752345472 CA6079990 |
374 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs752345472 CA381176795 |
374 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA381176777 rs1592411804 |
376 | T>P | No |
ClinGen Ensembl |
|
|
CA381176772 rs1318866113 |
376 | T>S | No |
ClinGen gnomAD |
|
|
CA223900773 rs868865303 |
377 | N>K | No |
ClinGen Ensembl |
|
|
CA381176762 rs1592411787 |
377 | N>T | No |
ClinGen Ensembl |
|
|
rs1131691807 RCV000492946 CA381176728 |
379 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
CA381176723 rs988962921 CA223900763 |
380 | V>L | No |
ClinGen TOPMed |
|
|
CA381176715 rs1326594401 |
381 | L>M | No |
ClinGen TOPMed |
|
|
rs1156945983 CA381176709 |
381 | L>P | No |
ClinGen Ensembl |
|
|
CA381176703 rs1371878710 |
382 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1272968595 CA381176695 |
382 | P>L | No |
ClinGen TOPMed |
|
|
CA381176673 rs1169114983 |
384 | A>S | No |
ClinGen gnomAD |
|
| TCGA novel | 386 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381176654 rs1314690048 |
386 | E>K | No |
ClinGen TOPMed |
|
|
rs926204490 CA223900758 |
387 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA381176631 rs200357590 |
387 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381176634 rs200357590 |
387 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6079983 rs764264311 |
388 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6079982 rs149649134 |
389 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381176607 rs149649134 |
389 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381176614 rs1246589868 |
389 | P>T | No |
ClinGen TOPMed |
|
|
rs1592411679 CA381176588 |
391 | H>P | No |
ClinGen Ensembl |
|
|
CA6079979 CA381176580 rs765402043 |
391 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA223900715 rs138260574 |
392 | L>F | No |
ClinGen ESP |
|
|
rs759336535 CA223900712 |
392 | L>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381176532 rs1592411660 |
395 | T>P | No |
ClinGen Ensembl |
|
|
CA381176524 rs71581787 |
395 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs747675778 CA6079973 |
399 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6079971 rs754552811 |
401 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381176452 rs1230887385 |
402 | Q>E | No |
ClinGen TOPMed |
|
|
rs1425476155 CA381176391 |
405 | Y>C | No |
ClinGen gnomAD |
|
|
rs752045365 CA381176344 |
407 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752045365 CA6079966 |
407 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381176324 rs1440882452 CA381176325 |
408 | N>K | No |
ClinGen gnomAD |
|
|
rs1482915500 CA381176319 |
409 | Q>E | No |
ClinGen TOPMed |
|
|
CA381176308 rs1420229343 |
409 | Q>H | No |
ClinGen TOPMed |
|
|
CA223900664 rs1045485007 |
409 | Q>R | No |
ClinGen TOPMed |
|
|
rs764712114 CA6079965 |
410 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764712114 CA381176301 |
410 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381176266 rs1201907547 |
412 | L>F | No |
ClinGen gnomAD |
|
|
CA381176261 rs1444312604 |
412 | L>H | No |
ClinGen gnomAD |
|
|
CA381176239 rs369313102 |
413 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6079964 rs752857036 |
413 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750184482 CA6079940 |
414 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA6079941 rs11231866 |
414 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381176187 rs1403970768 |
415 | V>L | No |
ClinGen gnomAD |
|
|
rs767347157 CA381176180 |
416 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs1345201383 CA381176181 |
416 | A>S | No |
ClinGen gnomAD |
|
|
rs1345201383 CA381176183 |
416 | A>T | No |
ClinGen gnomAD |
|
|
CA381176177 rs1351013593 |
417 | A>T | No |
ClinGen gnomAD |
|
|
rs761724503 CA6079938 |
418 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA381176149 rs1171569516 |
419 | F>Y | No |
ClinGen gnomAD |
|
|
CA381176126 rs1426882389 |
420 | P>L | No |
ClinGen gnomAD |
|
|
rs767983174 CA6079936 |
420 | P>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA6079935 rs762538125 |
421 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769602726 CA6079934 |
422 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs562393971 CA223900425 |
422 | D>N | No |
ClinGen Ensembl |
|
|
CA6079932 rs201389731 |
423 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6079928 rs368608057 |
425 | R>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs368608057 CA6079929 |
425 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs577821154 CA6079930 |
425 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs146919445 CA6079926 |
427 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381176038 rs756303162 |
427 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6079924 rs756303162 |
427 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs146919445 CA6079925 |
427 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs750700202 CA6079923 |
428 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6079922 rs767293977 |
428 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs750700202 CA381176032 |
428 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381176008 rs1445217077 |
429 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA6079920 rs751394888 |
434 | E>* | No |
ClinGen ExAC |
|
|
CA381175912 rs1177963512 |
435 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs764115501 CA6079919 |
435 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199728804 CA381175901 |
436 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs199728804 CA6079918 |
436 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6079916 rs769479715 |
439 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6079915 rs759251930 |
442 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA381175818 rs1459693899 |
442 | M>V | No |
ClinGen gnomAD |
|
|
rs776496291 COSM1355762 CA6079914 |
443 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs922555750 CA223900304 |
443 | A>V | No |
ClinGen gnomAD |
|
|
rs1306773818 CA381175802 |
444 | H>R | No |
ClinGen gnomAD |
|
|
rs1592411042 CA381175806 |
444 | H>Y | No |
ClinGen Ensembl |
|
| TCGA novel | 446 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1379826043 CA381175789 |
446 | C>S | No |
ClinGen gnomAD |
|
|
CA381175780 rs1483894861 |
447 | I>M | No |
ClinGen TOPMed |
|
|
rs749358752 CA6079912 |
448 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6079909 rs749805338 |
449 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs377599118 CA381175761 |
451 | H>Q | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA6079905 rs746021869 |
452 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001849580 rs758774720 |
452 | A>T | No |
ClinVar dbSNP |
|
|
CA6079902 rs151213354 |
453 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381175747 rs1485352436 |
454 | N>S | No |
ClinGen gnomAD |
|
|
CA381175741 rs1356459572 |
455 | G>D | No |
ClinGen gnomAD |
|
|
CA6079899 rs201042910 |
455 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201042910 CA6079898 |
455 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs398124208 CA381175738 |
456 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6079895 rs760281187 |
458 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs774752187 CA6079894 |
458 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA381175724 rs774752187 |
458 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA6079891 rs749795443 |
459 | I>T | No |
ClinGen ExAC |
|
|
rs1360941286 CA381175697 |
461 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA6079888 rs745968794 |
464 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA381175641 rs555057489 |
465 | K>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381175603 rs1193311638 |
468 | I>T | No |
ClinGen TOPMed |
|
|
CA6079886 rs757470750 |
468 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1184817467 CA381175508 |
469 | F>S | No |
ClinGen TOPMed |
|
|
CA6079860 rs754940511 |
470 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 471 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1298385 rs142207594 CA6079859 |
472 | F>L | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA |
|
rs777581367 CA6079858 |
477 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381175366 rs1565534916 RCV000722207 |
477 | P>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
COSM930186 rs767125939 CA6079855 |
481 | Q>H | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
RCV000513627 COSM930185 CA223899899 rs926661627 |
486 | G>S | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar NCI-TCGA dbSNP gnomAD |
|
CA381175107 rs1162560413 |
488 | T>A | No |
ClinGen TOPMed |
|
|
CA381175038 rs1592410540 |
490 | R>Q | No |
ClinGen Ensembl |
|
|
CA6079852 COSM116839 rs765612286 |
490 | R>W | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs759977194 CA6079851 |
491 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs369431327 CA6079849 |
491 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369431327 CA6079850 |
491 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6079848 rs760721606 |
493 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs1592410525 CA381174915 |
494 | V>G | No |
ClinGen Ensembl |
|
|
rs1408827992 CA381174925 |
494 | V>I | No |
ClinGen TOPMed |
|
|
rs200101718 CA6079846 |
498 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA223899849 rs867567820 |
499 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs925541886 CA223899845 |
501 | A>T | No |
ClinGen Ensembl |
|
|
rs1592410495 CA381174634 |
503 | V>G | No |
ClinGen Ensembl |
|
|
CA6079845 rs149932883 |
503 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs544460202 CA6079844 |
505 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1420860986 CA381174275 |
507 | R>C | No |
ClinGen gnomAD |
|
|
rs575153481 CA6079822 |
507 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA223899482 rs540436223 |
508 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755309894 CA223899463 CA381174226 |
509 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755309894 CA6079818 |
509 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766794236 CA6079816 |
511 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs139570786 CA381174048 |
513 | I>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1217202075 CA381174030 |
513 | I>N | No |
ClinGen gnomAD |
|
|
rs1287109702 CA381174014 |
514 | S>A | No |
ClinGen gnomAD |
|
| TCGA novel | 515 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762045147 CA6079813 |
516 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1467786333 CA381173942 |
517 | D>E | No |
ClinGen TOPMed |
|
|
CA223899437 rs201777190 |
517 | D>H | No |
ClinGen TOPMed |
|
|
CA6079810 rs572480976 |
520 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs745724914 CA6079808 |
525 | F>I | No |
ClinGen ExAC gnomAD |
|
|
CA6079807 rs775496411 |
527 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381173776 rs1367308757 |
527 | D>Y | No |
ClinGen TOPMed |
|
|
rs1294601732 CA381173760 |
528 | D>G | No |
ClinGen TOPMed |
|
|
rs770412776 CA6079806 |
529 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769889481 CA223899383 |
532 | I>V | No |
ClinGen gnomAD |
|
|
CA381173625 rs1194180857 |
533 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1194180857 CA381173627 |
533 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA6079805 rs746568228 |
533 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746031643 CA223899374 |
534 | D>Y | No |
ClinGen Ensembl |
|
|
rs777370585 CA6079804 |
535 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs757944811 CA6079802 |
537 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757944811 CA381173532 |
537 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 540 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA223899107 rs119103257 |
541 | E>K | No |
ClinGen TOPMed |
|
|
CA381171095 rs1311913891 |
553 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1276992097 CA381171059 |
554 | Y>H | No |
ClinGen gnomAD |
|
|
CA6079783 rs747755385 |
557 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA381170957 rs1308614484 |
558 | I>N | No |
ClinGen gnomAD |
|
|
rs1204741662 CA381170964 |
558 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 559 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778688360 CA6079782 |
559 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1469650050 CA381170898 |
561 | N>H | No |
ClinGen TOPMed |
|
|
rs1182548085 CA381170852 |
562 | S>L | No |
ClinGen TOPMed |
|
|
CA6079780 rs746276802 |
563 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 563 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs116812032 CA223899051 |
564 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381170822 rs1425495787 |
564 | F>L | No |
ClinGen TOPMed |
|
|
rs1364727739 COSM176038 CA6079777 |
565 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1565534289 RCV000723043 CA381170769 |
566 | I>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA381170777 rs1592409691 |
566 | I>V | No |
ClinGen Ensembl |
|
|
rs1006658592 CA381170751 |
567 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1006658592 CA223899044 |
567 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA381170728 rs1309444215 |
568 | V>A | No |
ClinGen TOPMed |
|
|
CA6079776 rs757791045 |
568 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA6079774 rs143550601 |
570 | R>Q | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs752848974 CA381170622 |
573 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1180867448 CA381170558 |
574 | Y>C | No |
ClinGen gnomAD |
|
|
rs759218298 CA381170504 |
576 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759218298 COSM257840 CA6079771 |
576 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA6079770 rs753587100 |
578 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA6079769 rs766179801 |
582 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381170379 rs1239270255 |
583 | H>Q | No |
ClinGen TOPMed |
|
|
CA381170388 rs1437464596 |
583 | H>Y | No |
ClinGen TOPMed |
|
|
CA6079767 rs372302160 |
584 | V>I | No |
ClinGen ESP ExAC |
|
|
CA381170362 rs1181643904 |
585 | I>F | No |
ClinGen TOPMed |
|
|
rs771473972 CA6079766 |
586 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA381170352 rs1592409609 |
586 | T>P | No |
ClinGen Ensembl |
|
|
rs771473972 CA381170344 |
586 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA381170339 rs1355883166 |
587 | L>V | No |
ClinGen gnomAD |
|
|
rs768315652 CA6079763 |
589 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA381170278 rs140016055 |
589 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1222835 rs368545367 CA6079761 |
590 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC gnomAD |
|
rs368545367 CA381170259 |
590 | R>G | No |
ClinGen ESP ExAC gnomAD |
|
|
CA223898669 rs115942812 |
590 | R>H | No |
ClinGen 1000Genomes gnomAD |
|
|
CA381170088 rs1352390824 |
591 | I>L | No |
ClinGen TOPMed |
|
|
rs1317576278 CA381170077 |
591 | I>N | No |
ClinGen gnomAD |
|
|
rs1006964717 CA223898666 |
593 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1220310363 CA381169990 |
595 | P>S | No |
ClinGen gnomAD |
|
|
CA6079734 rs749501772 |
596 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs150622626 CA223898664 |
596 | N>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1385029336 CA381169952 |
597 | K>E | No |
ClinGen gnomAD |
|
|
rs780307351 CA6079733 |
598 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA6079732 rs755874000 |
599 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA381169839 rs1198711566 |
603 | T>A | No |
ClinGen gnomAD |
|
|
CA6079728 rs751456350 |
604 | V>A | No |
ClinGen ExAC |
|
|
rs757162212 CA6079729 |
604 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1254930380 CA381169746 |
606 | I>T | No |
ClinGen gnomAD |
|
|
rs1194416311 CA381169727 |
607 | G>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs769869077 CA6079697 |
611 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs746099017 CA6079696 |
612 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381169448 rs1419658107 |
612 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 614 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6079694 rs767068621 |
616 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1368180368 CA381169283 |
620 | I>F | No |
ClinGen gnomAD |
|
|
CA381169187 rs1374947591 |
625 | T>I | No |
ClinGen TOPMed |
|
| TCGA novel | 626 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381169162 rs1460650384 |
627 | I>L | No |
ClinGen TOPMed |
|
|
CA381169149 rs369361532 |
627 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs753510042 CA6079687 |
627 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs985430793 CA223898274 |
628 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs201591132 CA6079685 |
628 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1451559399 CA381169131 |
629 | D>A | No |
ClinGen TOPMed |
|
|
RCV000722246 rs1451559399 CA381169129 |
629 | D>G | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
rs137986928 CA6079684 |
629 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6079682 rs763385602 |
632 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381169081 rs763385602 |
632 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6079681 rs776043985 |
634 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA381169017 rs1399909644 |
634 | D>H | No |
ClinGen gnomAD |
|
|
rs368385152 COSM429557 CA6079680 |
635 | P>L | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1161629133 CA599803599 |
637 | V>A | No |
ClinGen gnomAD |
|
|
CA223898256 rs898147117 |
637 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA6079678 rs776881451 |
638 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1592408994 CA381168925 |
639 | D>A | No |
ClinGen Ensembl |
|
|
CA6079676 rs141267088 |
640 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs777649758 CA6079675 |
641 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA6079668 rs750081936 |
650 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6079667 rs750081936 |
650 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381168581 rs1274186900 |
654 | A>V | No |
ClinGen gnomAD |
|
|
CA381168355 rs1407678736 |
657 | V>A | No |
ClinGen TOPMed |
|
|
rs1174374786 CA381168517 |
657 | V>L | No |
ClinGen TOPMed |
|
|
CA381168309 rs1425743014 |
661 | A>T | No |
ClinGen TOPMed |
|
|
rs1344979389 CA381168298 |
661 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 662 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381168274 rs1301319669 |
663 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs773633182 CA6079659 |
664 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs119103256 CA381168208 |
666 | Q>* | No |
ClinGen TOPMed |
|
|
CA381168191 rs1337679288 |
667 | I>F | No |
ClinGen TOPMed |
|
|
rs1241055622 CA381168163 |
668 | S>F | No |
ClinGen TOPMed |
|
|
rs113806080 CA6079658 |
670 | A>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs768434441 CA6079656 |
671 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs1458749530 CA381168113 |
672 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA381168116 rs1458749530 |
672 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1212476417 CA381168109 |
673 | E>K | No |
ClinGen gnomAD |
|
|
CA381168082 rs1413827545 |
674 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs2230309 CA223897851 |
676 | G>S | No |
ClinGen Ensembl |
|
|
rs928891607 CA381168047 |
677 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA223897849 rs928891607 |
677 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA381168018 rs1176352993 |
680 | M>L | No |
ClinGen gnomAD |
|
|
rs1376064042 CA381167994 |
682 | F>L | No |
ClinGen TOPMed |
|
|
CA6079652 rs745509448 |
682 | F>L | No |
ClinGen ExAC TOPMed |
|
|
rs1326721251 CA381167998 |
682 | F>Y | No |
ClinGen TOPMed |
|
|
CA381167986 rs780873398 CA6079651 |
683 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA381167990 rs1448146849 |
683 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA6079650 rs758730269 |
684 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs765656412 CA6079648 |
685 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381167943 rs1324009345 |
689 | T>I | No |
ClinGen gnomAD |
|
|
CA381167935 rs1308677081 |
690 | I>F | No |
ClinGen gnomAD |
|
|
CA223897803 rs140349323 |
690 | I>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA381167937 rs1308677081 |
690 | I>V | No |
ClinGen gnomAD |
|
|
CA381167899 rs1462145774 |
692 | T>N | No |
ClinGen TOPMed |
|
|
CA381167891 rs1375876566 |
693 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
rs200688234 CA381167884 |
693 | M>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381167894 rs1375876566 |
693 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA381167867 rs1446934873 |
694 | D>G | No |
ClinGen gnomAD |
|
|
CA6079641 rs773962878 |
698 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs768505332 CA6079640 |
699 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775556000 CA6079638 |
702 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6079639 rs775556000 |
702 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA223897752 rs915786151 |
706 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs770519283 CA6079634 |
706 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381167646 rs1285381507 |
707 | E>G | No |
ClinGen gnomAD |
|
|
CA6079632 rs779080119 |
711 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA381167575 rs1323673131 |
712 | F>S | No |
ClinGen TOPMed |
|
|
CA6079630 rs754283023 |
713 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA6079631 rs755433896 |
713 | G>C | No |
ClinGen ExAC |
|
|
CA6079628 rs756722295 |
715 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs750483467 RCV000175190 CA240892 |
716 | V>G | No |
ClinGen ClinVar ExAC dbSNP |
|
|
rs767722082 CA6079627 |
717 | E>G | No |
ClinGen ExAC |
|
|
rs762063648 CA6079626 |
718 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA381167535 rs1250987209 |
719 | V>M | No |
ClinGen gnomAD |
|
|
rs1345296605 CA381167528 |
720 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 721 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381167508 RCV000493570 rs1131691265 |
722 | L>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA381167504 rs1163587055 |
723 | D>A | No |
ClinGen gnomAD |
|
|
CA381167502 rs1163587055 |
723 | D>V | No |
ClinGen gnomAD |
|
|
CA381167495 rs1565533090 |
724 | Q>R | No |
ClinGen Ensembl |
|
|
rs1474046583 CA381167487 |
725 | R>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1416120916 CA381167485 |
725 | R>S | No |
ClinGen gnomAD |
|
|
rs1190587944 CA381167479 |
726 | G>E | No |
ClinGen gnomAD |
|
|
rs1592405839 CA381165964 |
727 | Y>D | No |
ClinGen Ensembl |
|
|
rs763116413 CA6079606 |
729 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA381165891 rs1299991104 |
730 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 730 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6079604 rs765027559 |
733 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA223894986 rs1019588921 |
734 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs559363120 CA6079601 |
735 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs760277933 CA381165735 |
735 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA223894967 rs887165619 |
736 | I>V | No |
ClinGen Ensembl |
|
| TCGA novel | 738 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA223894962 rs370144967 |
739 | L>P | No |
ClinGen ESP |
|
|
CA223894946 rs931468914 |
740 | R>Q | No |
ClinGen TOPMed |
|
|
COSM3791774 CA223894960 rs1048544068 |
740 | R>W | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs747771739 CA6079597 |
741 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1592405710 CA381165618 |
742 | V>G | No |
ClinGen Ensembl |
|
|
CA381165631 rs1396989158 |
742 | V>I | No |
ClinGen gnomAD |
|
|
rs775934991 CA6079596 |
743 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1194473443 CA381165612 |
743 | I>V | No |
ClinGen gnomAD |
|
|
rs1248134647 CA381165547 |
745 | Q>* | No |
ClinGen gnomAD |
|
|
rs781776953 CA6079593 |
749 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1232022501 CA381165377 |
750 | F>C | No |
ClinGen gnomAD |
|
|
rs571207448 CA381165332 |
752 | S>C | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA6079590 rs571207448 |
752 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA TOPMed gnomAD |
|
CA381165308 rs1174505595 |
753 | P>R | No |
ClinGen TOPMed |
|
|
rs1592405589 CA381165298 |
754 | K>Q | No |
ClinGen Ensembl |
|
|
CA381165291 rs1238942550 |
754 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1592405564 CA381165253 |
756 | P>A | No |
ClinGen Ensembl |
|
|
CA6079588 rs777736319 |
756 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777736319 CA381165244 |
756 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381165214 rs1312751218 |
757 | D>E | No |
ClinGen gnomAD |
|
|
CA381165229 rs752919943 |
757 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752919943 CA6079586 |
757 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1396946363 CA381165176 |
759 | F>L | No |
ClinGen gnomAD |
|
|
rs201161067 CA6079583 |
760 | K>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 760 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs149985911 CA381165138 |
761 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs149985911 CA6079582 |
761 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6079578 rs761526819 |
764 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774209033 CA6079577 |
765 | M>R | No |
ClinGen ExAC |
|
|
CA6079576 rs529442663 |
767 | M>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 768 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs746276500 CA6079575 |
769 | H>N | No |
ClinGen ExAC |
|
|
rs771421657 CA6079573 |
769 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771421657 CA6079574 |
769 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1565531372 CA381164893 RCV000722764 |
770 | D>A | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs150911354 CA381164857 |
771 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381164670 rs1439825254 |
773 | K>T | No |
ClinGen TOPMed |
|
|
CA6079548 rs200164932 |
774 | V>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs751807745 CA381164563 |
776 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751807745 CA6079547 |
776 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA223894767 rs1014177089 |
779 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs755923861 CA6079546 |
782 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA381164167 rs1326266879 |
790 | A>D | No |
ClinGen TOPMed |
|
|
CA6079544 rs781031847 |
790 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6079542 rs763712129 |
793 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA6079541 rs763712129 |
793 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs762625291 CA6079540 |
793 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA6079523 rs377401213 |
799 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs1476157353 CA381163835 |
800 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs767879221 CA6079518 |
801 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1434074764 CA381163800 |
801 | M>L | No |
ClinGen gnomAD |
|
|
rs750701415 CA6079519 |
801 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA381163738 rs1592404630 |
802 | V>G | No |
ClinGen Ensembl |
|
|
CA6079516 COSM3398021 rs372295369 |
804 | R>Q | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6079517 rs762305749 |
804 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs373305106 CA223894674 |
806 | I>T | No |
ClinGen Ensembl |
|
|
CA6079513 rs775670598 |
807 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs983130582 CA223894667 |
809 | S>A | No |
ClinGen Ensembl |
|
|
rs1485657971 CA381163460 |
811 | K>N | No |
ClinGen gnomAD |
|
|
CA381163452 rs1396027876 |
812 | F>L | No |
ClinGen TOPMed |
|
|
CA381163448 rs1278265115 |
812 | F>Y | No |
ClinGen gnomAD |
|
|
rs1592404531 CA381163397 |
814 | S>G | No |
ClinGen Ensembl |
|
|
CA223894660 rs756371519 |
814 | S>R | No |
ClinGen Ensembl |
|
|
rs143177272 COSM1355759 CA381163307 |
816 | R>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs886048460 CA381163277 |
817 | T>S | No |
ClinGen gnomAD |
|
|
CA381163263 rs1375221207 |
818 | I>V | No |
ClinGen gnomAD |
|
|
rs746928719 CA6079509 |
819 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA381163143 rs537438002 |
820 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6079507 rs757950557 |
821 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA6079506 rs747567834 |
822 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1156441426 CA381163072 |
823 | R>Q | No |
ClinGen gnomAD |
|
|
rs200464333 CA6079504 |
823 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381162964 rs1402126215 |
826 | W>* | No |
ClinGen gnomAD |
|
|
rs753530504 CA6079503 |
826 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs969424691 CA223894638 |
827 | G>D | No |
ClinGen Ensembl |
|
|
rs767857001 CA6079502 |
828 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1475088481 CA381162853 |
829 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1262087146 CA381162794 |
830 | P>R | No |
ClinGen TOPMed |
|
|
CA6079500 rs752034635 |
832 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs1592404359 CA381162707 |
833 | Q>K | No |
ClinGen Ensembl |
|
|
rs200118962 CA6079499 |
834 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200118962 CA381162636 |
834 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs548125114 CA6079498 |
834 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA381162544 rs1296372306 |
837 | A>D | No |
ClinGen gnomAD |
|
|
CA6079496 rs765365572 |
838 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs775376390 CA6079497 |
838 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA6079494 rs147307168 |
839 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs896668027 CA223894622 |
840 | E>K | No |
ClinGen Ensembl |
1 associated diseases with P11217
[MIM: 232600]: Glycogen storage disease 5 (GSD5)
A metabolic disorder resulting in myopathy characterized by exercise intolerance, cramps, muscle weakness and recurrent myoglobinuria. {ECO:0000269|PubMed:10382911, ECO:0000269|PubMed:10382912, ECO:0000269|PubMed:10417800, ECO:0000269|PubMed:10590419, ECO:0000269|PubMed:10681080, ECO:0000269|PubMed:10714589, ECO:0000269|PubMed:10899452, ECO:0000269|PubMed:11706962, ECO:0000269|PubMed:12031624, ECO:0000269|PubMed:7603523, ECO:0000269|PubMed:8316268, ECO:0000269|PubMed:8535454, ECO:0000269|PubMed:9506549}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A metabolic disorder resulting in myopathy characterized by exercise intolerance, cramps, muscle weakness and recurrent myoglobinuria. {ECO:0000269|PubMed:10382911, ECO:0000269|PubMed:10382912, ECO:0000269|PubMed:10417800, ECO:0000269|PubMed:10590419, ECO:0000269|PubMed:10681080, ECO:0000269|PubMed:10714589, ECO:0000269|PubMed:10899452, ECO:0000269|PubMed:11706962, ECO:0000269|PubMed:12031624, ECO:0000269|PubMed:7603523, ECO:0000269|PubMed:8316268, ECO:0000269|PubMed:8535454, ECO:0000269|PubMed:9506549}. Note=The disease is caused by variants affecting the gene represented in this entry.
No regional properties for P11217
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for P11217 | |||
Functions
| Description | ||
|---|---|---|
| EC Number | 2.4.1.1 | Hexosyltransferases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| glycogen phosphorylase activity | Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate. |
| linear malto-oligosaccharide phosphorylase activity | Catalysis of the reaction: hydrogenphosphate + a linear malto-oligosaccharide = alpha-D-glucose 1-phosphate + a linear malto-oligosaccharide. |
| nucleotide binding | Binding to a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. |
| pyridoxal phosphate binding | Binding to pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
| SHG alpha-glucan phosphorylase activity | Catalysis of the reaction: hydrogenphosphate + a plant soluble heteroglycan = alpha-D-glucose 1-phosphate + a plant soluble heteroglycan. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| glycogen catabolic process | The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues. |
| glycogen metabolic process | The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha-(1->4) glycosidic linkage, joined together by alpha-(1->6) glycosidic linkages. |
14 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P06738 | GPH1 | Glycogen phosphorylase | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q0VCM4 | PYGL | Glycogen phosphorylase, liver form | Bos taurus (Bovine) | PR |
| P06737 | PYGL | Glycogen phosphorylase, liver form | Homo sapiens (Human) | PR |
| P11216 | PYGB | Glycogen phosphorylase, brain form | Homo sapiens (Human) | PR |
| Q8CI94 | Pygb | Glycogen phosphorylase, brain form | Mus musculus (Mouse) | PR |
| Q9ET01 | Pygl | Glycogen phosphorylase, liver form | Mus musculus (Mouse) | PR |
| Q9WUB3 | Pygm | Glycogen phosphorylase, muscle form | Mus musculus (Mouse) | PR |
| P04045 | Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic | Solanum tuberosum (Potato) | PR | |
| P32811 | Alpha-glucan phosphorylase, H isozyme | Solanum tuberosum (Potato) | PR | |
| P53535 | STP-1 | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic | Solanum tuberosum (Potato) | PR |
| P09811 | Pygl | Glycogen phosphorylase, liver form | Rattus norvegicus (Rat) | PR |
| P09812 | Pygm | Glycogen phosphorylase, muscle form | Rattus norvegicus (Rat) | PR |
| Q9SD76 | PHS2 | Alpha-glucan phosphorylase 2, cytosolic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LIB2 | PHS1 | Alpha-glucan phosphorylase 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSRPLSDQEK | RKQISVRGLA | GVENVTELKK | NFNRHLHFTL | VKDRNVATPR | DYYFALAHTV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RDHLVGRWIR | TQQHYYEKDP | KRIYYLSLEF | YMGRTLQNTM | VNLALENACD | EATYQLGLDM |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EELEEIEEDA | GLGNGGLGRL | AACFLDSMAT | LGLAAYGYGI | RYEFGIFNQK | ISGGWQMEEA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DDWLRYGNPW | EKARPEFTLP | VHFYGHVEHT | SQGAKWVDTQ | VVLAMPYDTP | VPGYRNNVVN |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TMRLWSAKAP | NDFNLKDFNV | GGYIQAVLDR | NLAENISRVL | YPNDNFFEGK | ELRLKQEYFV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| VAATLQDIIR | RFKSSKFGCR | DPVRTNFDAF | PDKVAIQLND | THPSLAIPEL | MRILVDLERM |
| 370 | 380 | 390 | 400 | 410 | 420 |
| DWDKAWDVTV | RTCAYTNHTV | LPEALERWPV | HLLETLLPRH | LQIIYEINQR | FLNRVAAAFP |
| 430 | 440 | 450 | 460 | 470 | 480 |
| GDVDRLRRMS | LVEEGAVKRI | NMAHLCIAGS | HAVNGVARIH | SEILKKTIFK | DFYELEPHKF |
| 490 | 500 | 510 | 520 | 530 | 540 |
| QNKTNGITPR | RWLVLCNPGL | AEVIAERIGE | DFISDLDQLR | KLLSFVDDEA | FIRDVAKVKQ |
| 550 | 560 | 570 | 580 | 590 | 600 |
| ENKLKFAAYL | EREYKVHINP | NSLFDIQVKR | IHEYKRQLLN | CLHVITLYNR | IKREPNKFFV |
| 610 | 620 | 630 | 640 | 650 | 660 |
| PRTVMIGGKA | APGYHMAKMI | IRLVTAIGDV | VNHDPAVGDR | LRVIFLENYR | VSLAEKVIPA |
| 670 | 680 | 690 | 700 | 710 | 720 |
| ADLSEQISTA | GTEASGTGNM | KFMLNGALTI | GTMDGANVEM | AEEAGEENFF | IFGMRVEDVD |
| 730 | 740 | 750 | 760 | 770 | 780 |
| KLDQRGYNAQ | EYYDRIPELR | QVIEQLSSGF | FSPKQPDLFK | DIVNMLMHHD | RFKVFADYED |
| 790 | 800 | 810 | 820 | 830 | 840 |
| YIKCQEKVSA | LYKNPREWTR | MVIRNIATSG | KFSSDRTIAQ | YAREIWGVEP | SRQRLPAPDE |
| AI |