O94886
Gene name |
TMEM63A (KIAA0489, KIAA0792) |
Protein name |
CSC1-like protein 1 |
Names |
Transmembrane protein 63A |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:9725 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
4 structures for O94886
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 8EHW | EM | 380 A | A | 1-807 | PDB |
| 8GRS | EM | 330 A | A | 1-807 | PDB |
| 8WUA | EM | 360 A | A | 6-719 | PDB |
| AF-O94886-F1 | Predicted | AlphaFoldDB |
629 variants for O94886
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000850174 VAR_083043 RCV000884702 rs1576101665 CA345024153 |
168 | G>E | Leukodystrophy Leukodystrophy, hypomyelinating, 19, transient infantile HLD19; loss of mechanosensitive ion channel activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000884700 RCV000850175 CA345016170 rs1576080546 VAR_083044 |
462 | I>N | Leukodystrophy Leukodystrophy, hypomyelinating, 19, transient infantile HLD19; loss of mechanosensitive ion channel activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA345013651 RCV000850176 VAR_083045 RCV000884698 rs1576074651 |
567 | G>S | Leukodystrophy Leukodystrophy, hypomyelinating, 19, transient infantile HLD19; loss of mechanosensitive ion channel activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA345025277 rs1576119584 |
2 | M>I | No |
ClinGen Ensembl |
|
|
rs527952122 CA38549320 |
3 | D>Y | No |
ClinGen 1000Genomes |
|
|
CA1419718 COSM1501442 rs147318694 |
4 | S>F | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA1419720 rs764369077 |
4 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147318694 CA1419719 |
4 | S>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1419717 COSM1581844 rs150756609 |
5 | P>A | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA1419716 rs756105944 |
5 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747842358 CA1419713 |
9 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1180493035 CA345025219 |
12 | S>A | No |
ClinGen TOPMed |
|
|
rs1180493035 CA345025217 |
12 | S>P | No |
ClinGen TOPMed |
|
|
rs370774544 CA1419711 |
13 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370774544 CA38549231 |
13 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA38549221 rs941337509 |
14 | A>V | No |
ClinGen TOPMed |
|
|
CA1419710 rs749145507 |
15 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1419709 rs143034154 |
16 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA345025191 rs112241897 |
17 | I>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1419707 rs112241897 |
17 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA345025170 rs781425677 |
20 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs781425677 CA1419706 |
20 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1449111506 CA345025166 |
20 | Q>H | No |
ClinGen TOPMed |
|
|
rs1576119435 CA345025168 |
20 | Q>R | No |
ClinGen Ensembl |
|
|
rs757345240 CA345025155 |
22 | G>A | No |
ClinGen ExAC TOPMed |
|
|
CA1419705 rs757345240 |
22 | G>V | No |
ClinGen ExAC TOPMed |
|
|
CA1419703 rs764269495 |
24 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs373127251 CA38549186 |
26 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA38549169 rs753093672 |
26 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753093672 CA1419701 |
26 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1419702 rs373127251 |
26 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1398001574 CA345025130 |
27 | P>R | No |
ClinGen gnomAD |
|
|
CA1419699 rs544697683 |
28 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1419698 rs140490039 |
29 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs140898373 CA1419697 |
30 | S>C | No |
ClinGen 1000Genomes ExAC |
|
| TCGA novel | 31 | Y>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345025074 rs377290215 |
35 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1419695 rs377290215 |
35 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA38549134 rs374417606 |
39 | S>G | No |
ClinGen ESP |
|
|
rs747847486 CA38549122 |
43 | Q>* | No |
ClinGen Ensembl |
|
|
CA345025015 rs1293957718 |
44 | G>E | No |
ClinGen gnomAD |
|
| TCGA novel | 44 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345025005 rs1409348489 |
46 | T>A | No |
ClinGen gnomAD |
|
|
rs1248314039 CA345024988 |
48 | G>A | No |
ClinGen TOPMed |
|
|
CA345024954 rs1389698459 |
54 | L>V | No |
ClinGen gnomAD |
|
|
rs1423336087 CA345024949 |
55 | L>V | No |
ClinGen TOPMed |
|
|
rs1473563560 CA345024938 |
56 | I>M | No |
ClinGen gnomAD |
|
|
CA1419683 rs758572598 |
57 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345024935 rs1467213584 |
57 | D>G | No |
ClinGen TOPMed |
|
|
rs747095793 CA1419684 |
57 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA1419681 rs752862561 |
58 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345024921 rs1253366186 |
59 | S>I | No |
ClinGen gnomAD |
|
|
CA345024922 rs1253366186 |
59 | S>N | No |
ClinGen gnomAD |
|
|
rs957001448 CA38549091 |
61 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1040613657 CA38547416 |
64 | L>S | No |
ClinGen TOPMed |
|
|
rs779164268 CA1419661 |
70 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1419660 rs755172681 |
71 | I>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755172681 CA345024828 |
71 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1344210262 CA345024831 |
71 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA345024824 rs1438537078 |
72 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA345024823 rs1438537078 |
72 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
CA345024811 rs1371394796 |
74 | R>* | No |
ClinGen gnomAD |
|
|
rs1319674155 CA345024798 |
75 | F>L | No |
ClinGen gnomAD |
|
|
rs1432409159 CA345024796 |
76 | W>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1390451342 CA345024776 |
78 | Y>C | No |
ClinGen gnomAD |
|
|
CA38547411 rs1018672013 |
80 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA1419659 rs371902873 |
80 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371902873 CA345024763 |
80 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345024758 rs780415187 |
81 | I>S | No |
ClinGen ExAC gnomAD |
|
|
CA1419658 rs780415187 |
81 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1049520566 CA38547405 |
82 | A>T | No |
ClinGen TOPMed |
|
|
rs767905205 CA1419655 |
84 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA345024746 rs767905205 |
84 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA1419617 rs761700413 |
90 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA1419618 rs767484298 |
90 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1369403356 CA345024690 |
90 | E>V | No |
ClinGen gnomAD |
|
|
CA345024665 rs1428403654 |
94 | Q>* | No |
ClinGen gnomAD |
|
|
rs1488923639 CA345024661 |
94 | Q>H | No |
ClinGen gnomAD |
|
|
rs774425398 CA1419616 |
94 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA1419614 rs370710498 |
98 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs768654557 CA1419615 |
98 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA345024635 rs1287720222 |
99 | T>A | No |
ClinGen TOPMed |
|
|
CA345024634 rs1287720222 |
99 | T>S | No |
ClinGen TOPMed |
|
|
CA345024614 rs1379456240 |
102 | S>L | No |
ClinGen Ensembl |
|
|
rs1459104430 CA345024606 |
104 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
CA1419610 rs781653230 |
105 | Q>* | No |
ClinGen ExAC |
|
|
CA1419609 rs757858670 |
106 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1301761037 CA345024531 |
112 | G>E | No |
ClinGen gnomAD |
|
|
COSM1339273 CA345024527 rs1240639966 |
113 | C>R | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs746024882 CA1419594 |
113 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA38545947 rs200219399 |
114 | C>R | No |
ClinGen 1000Genomes |
|
|
CA345024518 rs1167631904 |
114 | C>S | No |
ClinGen TOPMed |
|
|
CA1419593 rs777146602 |
115 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA38545944 rs990276807 COSM1288505 |
116 | W>* | Variant assessed as Somatic; 0.0 impact. autonomic_ganglia [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1421949945 CA345024506 COSM1288505 |
116 | W>* | autonomic_ganglia [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1327534063 CA345024499 |
117 | L>Q | No |
ClinGen TOPMed |
|
|
VAR_061813 rs57306966 CA38545941 |
121 | F>I | No |
ClinGen UniProt 1000Genomes TOPMed dbSNP gnomAD |
|
|
rs1321507316 CA345024473 |
121 | F>S | No |
ClinGen TOPMed |
|
|
rs377388952 CA1419592 |
122 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA38545937 rs778512108 |
122 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA345024428 rs1302373634 |
126 | D>A | No |
ClinGen gnomAD |
|
|
CA345024399 rs1396870772 |
130 | E>G | No |
ClinGen gnomAD |
|
|
rs1576101914 CA345024379 |
132 | C>W | No |
ClinGen Ensembl |
|
|
CA345024382 rs1297123030 |
132 | C>Y | No |
ClinGen TOPMed |
|
|
CA1419569 rs771268658 |
133 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs772667579 CA1419566 |
135 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs773681942 CA1419567 |
135 | D>H | No |
ClinGen ExAC |
|
|
rs1254832927 CA345024358 |
136 | A>G | No |
ClinGen gnomAD |
|
|
CA1419562 rs80287818 |
136 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1419564 rs80287818 |
136 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1419563 rs80287818 |
136 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1272181233 CA345024355 |
137 | I>V | No |
ClinGen TOPMed |
|
|
COSM1581843 CA1419561 rs115446082 |
138 | H>D | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA1419558 rs777379225 |
141 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA1419557 rs758366487 |
142 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1559046798 CA345024301 |
145 | H>D | No |
ClinGen Ensembl |
|
|
rs752507825 CA1419556 |
146 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1327295206 CA345024279 |
148 | F>V | No |
ClinGen gnomAD |
|
|
rs968416881 CA38541238 |
151 | V>M | No |
ClinGen TOPMed |
|
|
CA1419555 rs765218554 |
152 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1020043521 CA38541234 |
154 | S>C | No |
ClinGen Ensembl |
|
|
rs115600896 CA1419553 |
160 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA345024187 rs1387471488 |
163 | P>S | No |
ClinGen TOPMed |
|
|
CA38541224 rs1044933902 |
165 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1456088669 CA345024161 |
167 | S>P | No |
ClinGen TOPMed |
|
|
rs1184965374 CA345024148 |
169 | D>H | No |
ClinGen gnomAD |
|
|
rs773650277 CA1419550 |
171 | L>M | No |
ClinGen ExAC |
|
|
rs750546958 CA1419533 |
175 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs750546958 CA345024093 |
175 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1019154055 CA38540923 |
175 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
RCV001038017 rs762132510 |
176 | Y>* | No |
ClinVar dbSNP |
|
|
rs774746056 CA1419530 |
180 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA345024040 rs1559046253 |
183 | I>R | No |
ClinGen Ensembl |
|
|
rs763397871 CA1419528 |
183 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1337280603 CA345024006 |
188 | T>S | No |
ClinGen gnomAD |
|
|
RCV000955870 CA1419506 rs115347439 |
190 | N>H | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA1419505 rs771654081 |
190 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs774305381 CA1419503 |
191 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA1419504 rs747791456 |
191 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA345023975 rs1365862060 |
191 | D>V | No |
ClinGen TOPMed |
|
|
CA1419502 rs768501353 |
192 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1419499 rs115282879 |
194 | W>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA345023954 rs1346417022 |
195 | L>M | No |
ClinGen gnomAD |
|
|
rs1318458207 CA345023951 |
195 | L>P | No |
ClinGen gnomAD |
|
|
rs1401774755 CA345023945 |
196 | H>R | No |
ClinGen gnomAD |
|
|
CA1419498 rs769737172 |
197 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs372548855 CA1419496 |
198 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1419492 rs777965482 |
202 | I>M | No |
ClinGen ExAC |
|
|
rs115137646 CA1419493 |
202 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1419494 rs191489187 |
202 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1243897177 CA345023902 |
203 | Y>C | No |
ClinGen gnomAD |
|
|
CA1419491 rs45492299 |
206 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA345023870 rs1402285465 |
208 | V>A | No |
ClinGen gnomAD |
|
|
rs1044082896 CA38540481 |
208 | V>M | No |
ClinGen gnomAD |
|
|
rs750672540 CA38540468 |
209 | G>V | No |
ClinGen Ensembl |
|
|
COSM273688 CA1419487 rs368334549 |
212 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs760049167 CA1419488 |
212 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1419485 rs761380197 |
215 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1385917532 CA345023824 |
215 | T>I | No |
ClinGen gnomAD |
|
|
rs761380197 CA1419486 |
215 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA1419484 rs752630752 |
216 | Q>H* | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 217 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1425170715 CA345023807 |
218 | I>F | No |
ClinGen TOPMed |
|
|
CA1419483 rs374963238 |
218 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345023767 rs1353028768 |
223 | E>G | No |
ClinGen gnomAD |
|
|
rs1576098295 CA345023733 |
227 | R>G | No |
ClinGen Ensembl |
|
|
CA345023723 rs142373258 |
228 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1419450 rs142373258 |
228 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM904674 rs1274492466 CA345023725 |
228 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA345023717 rs1315814137 |
229 | T>I | No |
ClinGen gnomAD |
|
|
rs751133639 CA1419449 |
230 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs763636233 CA1419447 |
232 | I>M | No |
ClinGen ExAC |
|
|
rs1222582443 CA345023696 |
233 | T>P | No |
ClinGen gnomAD |
|
|
rs758128174 CA1419446 |
234 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA345023683 rs1440419556 |
235 | L>P | No |
ClinGen gnomAD |
|
|
rs1461970235 CA345023663 |
238 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs759422312 CA1419443 |
238 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1419442 rs776260328 |
239 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766373154 CA1419440 |
241 | K>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 242 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345023616 rs1192835748 |
245 | E>G | No |
ClinGen gnomAD |
|
|
rs1256646454 CA345023620 |
245 | E>K | No |
ClinGen TOPMed |
|
|
CA1419438 rs773293000 |
246 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA345023599 CA1419437 rs772076723 |
247 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA1419434 rs200544450 COSM1501443 |
249 | R>P | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA1419435 rs200544450 |
249 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs574552778 CA1419436 |
249 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1419403 rs200715020 |
250 | D>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1419401 rs115639846 |
251 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1187811932 CA345022210 |
251 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA345022203 rs1237211783 |
252 | Y>H | No |
ClinGen TOPMed |
|
|
CA1419399 rs768868822 |
253 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs768868822 CA38537838 |
253 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs201498073 CA1419397 |
254 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1419395 rs369935667 |
255 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA38537796 rs145694056 |
258 | V>A | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs770118004 CA1419394 |
258 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1402329836 CA345022144 |
259 | D>A | No |
ClinGen TOPMed |
|
|
CA38537782 rs946138520 |
261 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA1419393 rs760016927 |
262 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs771589505 CA1419391 |
263 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs140642925 CA1419389 |
266 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs138645976 CA1419388 |
270 | I>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345022075 rs138645976 |
270 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345022072 rs1330651651 |
270 | I>T | No |
ClinGen TOPMed |
|
|
CA38537747 rs921212141 |
274 | K>* | No |
ClinGen TOPMed |
|
|
CA345022047 rs921212141 |
274 | K>E | No |
ClinGen TOPMed |
|
|
rs748821904 CA1419387 |
274 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA1419386 rs376750060 |
276 | K>E | No |
ClinGen ESP ExAC TOPMed |
|
|
CA1419366 rs748792169 |
281 | K>N | No |
ClinGen ExAC |
|
|
CA345021973 rs1204453570 |
282 | S>N | No |
ClinGen gnomAD |
|
|
rs1204453570 CA345021975 |
282 | S>T | No |
ClinGen gnomAD |
|
|
rs1348519358 CA345021955 |
285 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1281061577 CA345021938 |
287 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA345021927 rs1044934286 |
289 | L>P | No |
ClinGen gnomAD |
|
|
CA38537601 rs1044934286 |
289 | L>Q | No |
ClinGen gnomAD |
|
|
rs930566633 CA38537592 |
290 | Q>R | No |
ClinGen Ensembl |
|
|
CA1419362 rs774943839 |
291 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs550369429 CA1419361 |
293 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs529510505 CA1419359 |
295 | Q>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs529510505 CA1419360 |
295 | Q>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1419358 rs757054922 |
295 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs116456190 CA1419356 |
296 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1419355 rs116456190 |
296 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs746796483 CA1419357 |
296 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752844802 CA1419354 |
297 | T>I | No |
ClinGen ExAC |
|
|
rs972141860 CA38537582 |
298 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA1419353 rs765351852 |
298 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA1419351 rs754179573 |
300 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1247345207 CA345021861 |
301 | P>L | No |
ClinGen gnomAD |
|
|
CA1419349 rs141742746 |
303 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs766612215 CA1419350 |
303 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA345021822 rs1576091548 |
307 | F>V | No |
ClinGen Ensembl |
|
|
CA345021812 rs1182240173 |
308 | C>S | No |
ClinGen TOPMed |
|
|
CA1419348 rs773599409 |
310 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA1419347 rs573617463 |
311 | E>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1576091507 CA345021781 |
312 | V>G | No |
ClinGen Ensembl |
|
|
CA345021785 rs1277972538 |
312 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA1419343 rs745365127 |
314 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs116516791 CA1419342 |
316 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs779044443 CA1419313 |
318 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs115452233 CA1419314 |
318 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA345021622 rs1258133211 |
319 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs768686642 CA1419312 |
320 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA345021602 rs1291921350 |
321 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1230557699 CA345021565 |
323 | Y>S | No |
ClinGen gnomAD |
|
|
rs969381263 CA38537379 |
324 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA345021531 rs1219274157 |
325 | T>A | No |
ClinGen TOPMed |
|
|
rs780137081 CA1419310 |
325 | T>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 326 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1419308 rs372305824 |
326 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374327294 CA1419309 |
326 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345021490 rs1220249059 |
327 | M>I | No |
ClinGen TOPMed |
|
|
CA38537378 rs748371880 |
328 | K>N | No |
ClinGen gnomAD |
|
|
CA1419307 rs369172814 |
329 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1186003163 CA345021453 |
330 | R>G | No |
ClinGen gnomAD |
|
| TCGA novel | 333 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1419306 rs757665625 |
333 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345021379 rs1166782486 |
335 | I>T | No |
ClinGen gnomAD |
|
|
rs1248646322 CA345021326 |
338 | E>A | No |
ClinGen TOPMed |
|
|
rs375216322 CA345021297 |
339 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA38537364 rs555104135 |
339 | E>G | No |
ClinGen 1000Genomes |
|
|
CA1419302 rs533729776 |
340 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1238341255 CA345021289 |
340 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1238341255 CA345021287 |
340 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs772977492 CA1419300 |
342 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772977492 CA1419299 |
342 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 343 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771828979 CA1419298 |
343 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA345021199 rs1576090750 |
344 | D>A | No |
ClinGen Ensembl |
|
|
CA345021189 rs1322913188 |
345 | Q>E | No |
ClinGen gnomAD |
|
|
rs1286669988 CA345021126 |
348 | G>E | No |
ClinGen gnomAD |
|
|
CA1419297 rs761742818 |
348 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA345021094 rs1224561892 |
349 | M>I | No |
ClinGen gnomAD |
|
|
CA345021069 rs1379588540 |
350 | A>D | No |
ClinGen gnomAD |
|
|
rs768741568 CA1419294 COSM404484 |
352 | V>I | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA1419292 rs779848348 |
353 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345021025 rs779848348 |
353 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs551246274 CA38537281 |
358 | S>F | No |
ClinGen 1000Genomes |
|
|
CA345020947 rs1380713722 |
359 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
rs543171714 CA1419288 |
359 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA345020945 rs1380713722 |
359 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA1419286 rs751941977 |
362 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs900135589 CA38536592 |
363 | I>V | No |
ClinGen Ensembl |
|
|
rs1264332566 CA345020328 |
364 | L>P | No |
ClinGen gnomAD |
|
|
rs1264332566 CA345020330 |
364 | L>R | No |
ClinGen gnomAD |
|
|
CA345020317 rs1210705491 COSM3804095 |
366 | D>Y | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1343323759 CA345020306 |
367 | F>C | No |
ClinGen gnomAD |
|
|
CA345020305 rs1257923261 |
367 | F>L | No |
ClinGen gnomAD |
|
|
rs116013256 CA1419268 |
368 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs146601568 CA1419267 |
369 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1419266 rs747166464 |
370 | C>W | No |
ClinGen ExAC gnomAD |
|
|
CA38536573 rs1011701834 |
371 | K>N | No |
ClinGen gnomAD |
|
|
CA345020218 rs1576088379 |
372 | C>S | No |
ClinGen Ensembl |
|
|
rs1489521319 CA345020196 COSM533090 |
373 | Q>H | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1341125155 CA345020200 |
373 | Q>R | No |
ClinGen gnomAD |
|
|
rs777967561 CA1419265 |
374 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs946912926 CA38536563 |
374 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1052834204 CA345020144 CA345020146 |
376 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA38536556 rs922141252 |
379 | G>R | No |
ClinGen TOPMed |
|
| TCGA novel | 380 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345020044 rs1404109742 |
382 | Q>P | No |
ClinGen gnomAD |
|
| TCGA novel | 382 | Q>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345020029 rs1461208949 |
383 | P>A | No |
ClinGen gnomAD |
|
|
CA1419263 rs748440868 |
383 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1172266821 CA345020012 |
384 | S>T | No |
ClinGen gnomAD |
|
|
CA345019977 rs1187885391 |
386 | H>R | No |
ClinGen gnomAD |
|
|
rs114853295 CA1419260 |
391 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs749973022 CA1419259 |
392 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA1419256 rs756978095 |
398 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA345019826 rs1559041696 |
399 | F>I | No |
ClinGen Ensembl |
|
|
rs919882812 CA38536483 |
401 | A>G | No |
ClinGen gnomAD |
|
|
CA1419253 rs763812477 |
401 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs763812477 CA1419252 |
401 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs919882812 CA345019810 |
401 | A>V | No |
ClinGen gnomAD |
|
|
rs911881094 CA38536465 |
402 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA1419251 rs762843499 |
402 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs775104407 CA1419250 |
403 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs765241071 CA1419249 |
403 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA1419247 rs776695742 |
408 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs749645088 CA1419220 |
411 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345018907 rs1204507320 |
414 | Q>* | No |
ClinGen gnomAD |
|
| TCGA novel | 414 | Q>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 416 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1419217 rs770381793 |
417 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746536484 CA1419216 |
417 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA38535456 rs1045597515 |
422 | W>* | No |
ClinGen Ensembl |
|
|
rs777088826 CA1419215 |
424 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA345018453 rs752358693 |
425 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA1419213 rs752358693 |
425 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs778614695 CA1419212 |
426 | N>K | No |
ClinGen ExAC |
|
|
rs754816246 CA1419211 |
428 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1419210 rs753599553 |
429 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1160884835 CA345018131 |
432 | G>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs760559507 CA1419207 |
436 | L>P | No |
ClinGen ExAC |
|
|
rs149848059 CA1419206 |
437 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA345017952 rs1208380892 |
439 | P>R | No |
ClinGen TOPMed |
|
|
rs761952080 CA1419204 |
439 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs915136067 CA38535356 |
441 | I>V | No |
ClinGen TOPMed |
|
|
CA345017867 rs1265050049 |
445 | T>A | No |
ClinGen gnomAD |
|
|
rs982550757 CA38535342 |
446 | M>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA345017682 rs1184217880 |
451 | V>G | No |
ClinGen TOPMed |
|
| TCGA novel | 452 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs114874822 CA38535337 |
457 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA TOPMed gnomAD |
| TCGA novel | 458 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1276006170 CA345017408 |
459 | N>S | No |
ClinGen gnomAD |
|
|
rs1280595835 CA345016217 |
460 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
rs776000468 COSM904672 CA1419181 |
461 | P>L | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA |
|
rs1215391754 CA345016143 |
464 | S>T | No |
ClinGen TOPMed |
|
|
CA1419178 rs777052443 |
470 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA345015951 rs139209425 |
474 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA38533633 rs1040455760 |
474 | S>T | No |
ClinGen Ensembl |
|
|
CA1419175 rs139209425 |
474 | S>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1419174 rs768312567 |
475 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs912360052 CA38533627 |
476 | S>L | No |
ClinGen gnomAD |
|
|
rs779679456 CA1419172 |
479 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA345015876 rs1183450420 |
480 | P>L | No |
ClinGen gnomAD |
|
|
rs1183450420 CA345015878 |
480 | P>R | No |
ClinGen gnomAD |
|
|
CA1419170 rs186710219 |
481 | S>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1168141825 CA345015770 |
486 | S>F | No |
ClinGen TOPMed |
|
|
rs757166107 CA1419168 |
487 | T>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 489 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1321709889 CA345015698 |
490 | E>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA1419163 rs758545850 |
490 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs753026260 CA1419162 |
492 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs765534154 CA1419160 |
494 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA38533275 rs979972451 |
495 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA1419138 rs766702251 |
496 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1419136 rs202236133 |
497 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1419134 CA345015501 rs767993739 |
498 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA1419133 rs372366088 |
499 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345015497 rs1238990869 |
499 | N>Y | No |
ClinGen TOPMed |
|
|
rs769342057 CA1419131 |
502 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1559038578 CA345015452 |
502 | M>L | No |
ClinGen Ensembl |
|
|
CA1419132 rs367878173 |
502 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1419130 rs759158194 |
504 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1280028128 CA345015397 |
505 | K>N | No |
ClinGen TOPMed |
|
|
rs1339842359 CA345015402 |
505 | K>R | No |
ClinGen gnomAD |
|
|
CA1419129 rs527273477 |
508 | I>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 508 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs746756700 CA1419127 |
513 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA1419125 rs772094659 |
516 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA1419124 rs748261411 |
519 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1392694320 CA345015082 |
524 | S>G | No |
ClinGen gnomAD |
|
|
rs780368313 CA1419099 |
529 | F>I | No |
ClinGen ExAC gnomAD |
|
|
rs1256288389 CA345014805 |
529 | F>L | No |
ClinGen gnomAD |
|
|
CA345014802 rs370848969 |
530 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1419098 rs370848969 |
530 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1286811437 CA345014803 COSM904671 |
530 | R>W | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs200316385 CA38532513 |
531 | W>* | No |
ClinGen 1000Genomes |
|
|
CA1419095 rs138154690 |
533 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1419094 rs757608415 |
538 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1283510419 CA345014745 |
539 | E>Q | No |
ClinGen gnomAD |
|
|
CA38532477 rs1020301097 |
540 | A>V | No |
ClinGen Ensembl |
|
|
rs1386874634 CA345014733 |
541 | S>T | No |
ClinGen TOPMed |
|
|
CA1419090 rs753239436 |
542 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA345013921 rs1487176714 |
546 | C>Y | No |
ClinGen gnomAD |
|
|
rs759582890 CA1419061 |
547 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs1343707087 CA345013885 |
549 | L>M | No |
ClinGen gnomAD |
|
|
CA345013853 rs1284470073 |
551 | D>E | No |
ClinGen gnomAD |
|
|
CA1419057 rs747432606 |
554 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA38531122 rs547841434 |
555 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA |
|
rs878975890 CA38531118 |
557 | V>E | No |
ClinGen Ensembl |
|
|
CA345013741 rs1401600234 |
559 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs151242805 CA1419056 |
561 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1419055 rs772645534 |
562 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149216134 CA1419054 |
563 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs755723413 CA1419052 |
566 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755723413 CA345013661 |
566 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 567 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1419050 rs373721455 |
568 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345013619 rs1323595848 |
569 | G>D | No |
ClinGen gnomAD |
|
|
rs756925175 CA1419049 |
569 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1323595848 CA345013615 |
569 | G>V | No |
ClinGen gnomAD |
|
|
CA345013612 rs1325223958 |
570 | M>L | No |
ClinGen TOPMed |
|
|
rs146699794 CA1419047 |
570 | M>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1419046 rs762806303 |
572 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs369519987 CA1419043 |
574 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1419044 rs765139600 |
574 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs775295346 CA38531061 |
579 | I>F | No |
ClinGen gnomAD |
|
|
CA345013495 rs1169909794 |
580 | L>F | No |
ClinGen gnomAD |
|
|
CA1419042 rs376838971 |
580 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1004604363 CA345013482 |
581 | Y>C | No |
ClinGen gnomAD |
|
|
rs1004604363 CA38531043 |
581 | Y>F | No |
ClinGen gnomAD |
|
|
CA38531053 rs377043894 |
581 | Y>H | No |
ClinGen Ensembl |
|
|
CA345013467 rs1186961513 |
582 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs75188792 CA1419041 |
584 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs760750326 CA1419040 COSM1473452 |
584 | R>H | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA38531039 rs960670575 |
585 | M>T | No |
ClinGen TOPMed |
|
|
CA345013438 rs1461403517 |
585 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1198585456 CA345013404 |
587 | M>V | No |
ClinGen gnomAD |
|
|
CA1419039 COSM904670 rs552485282 |
590 | T>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs759219656 CA38531030 |
593 | D>E | No |
ClinGen gnomAD |
|
|
rs1282681775 CA345013322 |
593 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 593 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1419036 rs184214838 |
594 | R>C | No |
ClinGen 1000Genomes |
|
|
CA1419035 rs200900214 |
594 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA345013305 rs200900214 |
594 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1419034 rs779609845 |
599 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA345012805 rs1213860211 |
601 | Q>E | No |
ClinGen gnomAD |
|
|
CA345012789 rs1318837647 |
602 | A>S | No |
ClinGen gnomAD |
|
|
CA345012779 rs1307718845 |
602 | A>V | No |
ClinGen gnomAD |
|
|
CA345012761 rs1559035735 |
604 | Q>* | No |
ClinGen Ensembl |
|
|
rs776139628 CA1419010 |
604 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA1419009 rs372983742 |
606 | E>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
CA345012714 rs1270579150 |
607 | F>S | No |
ClinGen TOPMed |
|
|
rs142731715 CA1419008 |
608 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345012703 rs1405381054 |
608 | G>R | No |
ClinGen gnomAD |
|
|
rs1207718509 CA345012674 |
610 | M>I | No |
ClinGen gnomAD |
|
|
CA1419007 rs576201370 |
610 | M>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1454975259 CA345012678 |
610 | M>T | No |
ClinGen gnomAD |
|
|
CA345012653 rs1345278362 |
612 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1345278362 CA345012655 |
612 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA38528527 rs942669306 |
612 | A>V | No |
ClinGen Ensembl |
|
|
rs747941663 CA1419005 |
613 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1419006 rs758031250 |
613 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA1419004 rs778622132 |
614 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs754752907 CA1419003 |
615 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA1419002 rs753839471 |
616 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA38528502 rs368338263 |
620 | V>I | No |
ClinGen Ensembl |
|
|
rs370524375 CA1419000 |
621 | I>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1009668 CA345012537 |
622 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1009668 CA1418999 VAR_031191 |
622 | V>M | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1428076815 CA345012525 |
623 | A>P | No |
ClinGen TOPMed |
|
|
COSM173099 rs1264969151 CA345012498 |
625 | S>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs377135043 CA1418997 |
626 | I>M | No |
ClinGen ESP ExAC gnomAD |
|
|
rs113994916 CA1418996 |
627 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs113994916 CA345012468 |
627 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1328741370 CA345012441 |
629 | P>L | No |
ClinGen TOPMed |
|
|
rs1301343783 CA345012450 |
629 | P>S | No |
ClinGen TOPMed |
|
|
rs774865665 CA1418995 |
631 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763382932 CA1418993 |
632 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs116201959 CA1418992 |
632 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1407606946 CA345012413 |
633 | P>L | No |
ClinGen gnomAD |
|
|
rs115530894 CA1418964 |
636 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1418963 rs115530894 |
636 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs745872415 CA1418961 |
637 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs201162140 COSM1581841 CA1418962 |
637 | I>V | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs1052683946 CA38526620 |
639 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA1418958 rs751643225 |
641 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1393594091 CA345011812 |
643 | H>Q | No |
ClinGen gnomAD |
|
|
rs778175774 CA345011810 |
644 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA345011801 rs1369304234 |
644 | M>T | No |
ClinGen TOPMed |
|
|
rs778175774 CA1418957 |
644 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs759956033 CA38526598 |
645 | V>M | No |
ClinGen Ensembl |
|
|
CA345011784 rs1177512352 |
646 | D>Y | No |
ClinGen gnomAD |
|
|
rs753018849 CA1418955 |
647 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA1418956 rs758628572 |
647 | R>W | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 648 | H>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1051979369 CA38526592 |
649 | N>S | No |
ClinGen TOPMed |
|
|
CA1418953 rs765691279 |
651 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA345011718 rs1469722818 |
651 | Y>D | No |
ClinGen gnomAD |
|
|
CA1418951 rs145863221 |
653 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1418950 rs766848700 |
654 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345011673 rs766848700 |
654 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761332479 CA1418949 |
655 | L>P | No |
ClinGen ExAC |
|
|
CA345011626 rs1490772902 |
657 | A>T | No |
ClinGen gnomAD |
|
|
CA1418947 rs768300074 |
658 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA1418946 rs762605479 |
663 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345011453 rs1241807622 |
664 | H>Q | No |
ClinGen gnomAD |
|
|
rs947449115 CA38526505 |
665 | F>I | No |
ClinGen Ensembl |
|
|
CA345011387 rs146840117 |
667 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1418943 rs146840117 |
667 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1418942 rs543998533 |
667 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs747092012 CA38526481 |
671 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747092012 CA1418940 |
671 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345011275 rs1576067327 |
673 | A>T | No |
ClinGen Ensembl |
|
|
CA1418938 rs758539519 |
674 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA345011229 rs1160439099 |
676 | I>V | No |
ClinGen gnomAD |
|
|
CA345011186 rs1454362149 |
678 | C>F | No |
ClinGen gnomAD |
|
|
rs1187140434 CA345011192 |
678 | C>R | No |
ClinGen TOPMed |
|
|
CA345011144 rs1559033511 |
681 | W>R | No |
ClinGen Ensembl |
|
|
CA345011058 rs1269268596 |
684 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 684 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1418935 rs770412529 |
684 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA1418933 rs766901624 |
686 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA345010984 rs1444853583 |
687 | F>Y | No |
ClinGen gnomAD |
|
|
CA1418932 rs762379887 |
689 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1446214507 CA345010523 |
692 | M>L | No |
ClinGen gnomAD |
|
|
rs1334699076 CA345010521 |
692 | M>T | No |
ClinGen gnomAD |
|
|
rs1454641185 CA345010515 |
693 | K>E | No |
ClinGen gnomAD |
|
|
CA345010506 rs1406806699 |
694 | A>D | No |
ClinGen gnomAD |
|
|
rs1031699711 CA38525770 |
694 | A>P | No |
ClinGen Ensembl |
|
|
CA345010502 rs756452406 |
695 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs750992101 CA1418914 |
695 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA1418915 rs756452406 |
695 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs376648031 COSM904668 CA1418911 |
696 | A>T | endometrium Variant assessed as Somatic; 6.027e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed |
|
CA345010495 rs1443562138 |
696 | A>V | No |
ClinGen gnomAD |
|
|
rs199899559 CA38525716 |
697 | T>I | No |
ClinGen 1000Genomes |
|
|
rs1184964772 CA345010489 |
698 | L>M | No |
ClinGen gnomAD |
|
|
rs907269802 CA38525715 |
700 | T>A | No |
ClinGen Ensembl |
|
|
CA345010472 rs1204389887 |
700 | T>I | No |
ClinGen gnomAD |
|
|
CA345010462 rs1436453622 |
702 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1275483902 CA345010458 |
703 | V>M | No |
ClinGen gnomAD |
|
|
rs1297564525 CA345010428 |
708 | I>F | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 708 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766346141 CA1418904 |
708 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs776410741 CA1418905 |
708 | I>S | No |
ClinGen ExAC gnomAD |
|
|
CA345010430 rs1297564525 |
708 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA38525684 rs368128506 |
710 | V>A | No |
ClinGen ESP gnomAD |
|
|
CA1418901 rs568592632 |
711 | C>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA345010399 rs1444747295 |
713 | A>G | No |
ClinGen gnomAD |
|
|
rs748290582 CA1418900 |
714 | H>D | No |
ClinGen ExAC gnomAD |
|
|
CA1418898 rs768932916 |
715 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1021981650 CA38525655 |
716 | C>R | No |
ClinGen TOPMed |
|
|
CA1418897 rs749565228 |
716 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA1418896 rs765505351 |
717 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1418894 rs746185601 |
718 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA345010345 rs1289909472 |
718 | G>R | No |
ClinGen gnomAD |
|
|
CA345010301 rs1322425644 |
720 | F>L | No |
ClinGen gnomAD |
|
| TCGA novel | 722 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781689352 CA1418893 |
722 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1306303578 CA345010280 |
722 | H>Y | No |
ClinGen gnomAD |
|
|
COSM3943503 CA345010267 rs1375517301 |
723 | L>F | ovary [Cosmic] | No |
ClinGen cosmic curated gnomAD |
| TCGA novel | 724 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 725 | P>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345010070 rs1192578785 |
730 | T>R | No |
ClinGen Ensembl |
|
|
rs963993065 CA38525286 |
733 | P>L | No |
ClinGen TOPMed |
|
|
rs1202963863 CA345010033 |
733 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs771315045 CA1418869 |
734 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA1418868 rs747537243 |
735 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345010010 rs1233763093 |
735 | S>N | No |
ClinGen gnomAD |
|
|
rs778314352 CA1418867 |
737 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA345009986 rs778314352 |
737 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1418865 rs115883015 |
740 | E>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1418864 rs545829694 |
741 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1449823864 CA345009898 |
741 | A>V | No |
ClinGen gnomAD |
|
|
rs755760581 CA1418863 |
743 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1023014137 CA38525238 |
745 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA1418862 rs750256409 |
746 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA345009760 rs1430454369 |
747 | P>L | No |
ClinGen gnomAD |
|
|
CA1418860 rs200799790 |
747 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs761660004 CA1418859 |
748 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA345009716 rs1460017111 |
749 | F>L | No |
ClinGen gnomAD |
|
|
CA38525222 rs1037526805 |
750 | T>I | No |
ClinGen Ensembl |
|
|
CA1418833 rs58852301 |
751 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1418832 rs200897453 |
752 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345008597 COSM1229716 rs1158691862 |
752 | Y>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs557116423 CA1418830 |
753 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1418828 rs766575680 |
754 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1418826 rs773556605 |
755 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs760976579 CA1418827 |
755 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA1418825 rs772718652 |
756 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs145910502 CA38524162 |
759 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs145910502 CA1418823 |
759 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1418821 rs745358141 CA1418822 |
760 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs780727416 CA1418820 |
762 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 762 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA345008402 rs1312967279 |
763 | E>K | No |
ClinGen TOPMed |
|
|
rs1267846331 CA345008382 |
764 | R>T | No |
ClinGen gnomAD |
|
|
rs1196840086 CA345008373 |
765 | T>A | No |
ClinGen gnomAD |
|
|
rs746795549 CA1418818 |
765 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs758189012 CA1418816 |
766 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA1418814 rs765137739 |
767 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1311406419 CA345008341 |
768 | S>T | No |
ClinGen TOPMed |
|
|
CA1418812 rs543585499 |
769 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA1418810 rs760892222 |
770 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA38524055 rs1038279638 |
771 | Q>R | No |
ClinGen TOPMed |
|
|
rs1334057499 CA345008293 |
772 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA1418809 rs374322367 |
773 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1418808 rs193031527 |
775 | Q>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA345008249 rs1380974669 |
777 | Y>* | No |
ClinGen TOPMed |
|
|
CA345008251 rs1381758802 |
777 | Y>C | No |
ClinGen gnomAD |
|
|
rs1559031074 CA345008253 |
777 | Y>D | No |
ClinGen Ensembl |
|
|
rs141158178 CA1418801 |
778 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1576060731 CA345008240 |
779 | A>P | No |
ClinGen Ensembl |
|
|
rs751823909 CA1418800 |
780 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA38524014 rs551210972 |
780 | I>T | No |
ClinGen Ensembl |
|
|
rs769234490 CA1418799 |
782 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776152722 CA1418796 |
785 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3376994 CA1418797 rs371101906 |
785 | G>R | pancreas [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA345008120 rs1444801702 |
787 | I>L | No |
ClinGen gnomAD |
|
|
rs1277354293 CA345008115 |
787 | I>T | No |
ClinGen gnomAD |
|
|
CA1418793 rs572303390 |
788 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs746747329 CA1418794 |
788 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs144560491 CA1418792 |
789 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA345008076 rs1263039802 |
790 | Q>P | No |
ClinGen gnomAD |
|
| TCGA novel | 793 | A>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1418791 COSM1339267 rs145042946 |
793 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA345008019 COSM79302 rs1275691433 |
794 | Q>* | ovary Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs754876677 CA1418789 |
796 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1418788 rs371169629 |
797 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1418787 rs371169629 |
797 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1405322540 CA345007957 |
798 | G>D | No |
ClinGen gnomAD |
|
|
rs750710174 CA1418785 |
799 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA1418784 rs767822076 |
799 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA345007896 rs1457359994 |
802 | A>V | No |
ClinGen TOPMed |
|
| rs756941718 | 805 | Q>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA38523912 rs1023969223 |
807 | A>S | No |
ClinGen TOPMed |
1 associated diseases with O94886
[MIM: 618688]: Leukodystrophy, hypomyelinating, 19, transient infantile (HLD19)
An autosomal dominant disorder characterized by marked hypomyelination on brain imaging, congenital nystagmus, and motor delay manifesting in early infancy. Both neurologic impairment and abnormal brain imaging spontaneously resolve during childhood. {ECO:0000269|PubMed:31587869}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- An autosomal dominant disorder characterized by marked hypomyelination on brain imaging, congenital nystagmus, and motor delay manifesting in early infancy. Both neurologic impairment and abnormal brain imaging spontaneously resolve during childhood. {ECO:0000269|PubMed:31587869}. Note=The disease is caused by variants affecting the gene represented in this entry.
8 GO annotations of cellular component
| Name | Definition |
|---|---|
| centriolar satellite | A small (70-100 nm) cytoplasmic granule that contains a number of centrosomal proteins; centriolar satellites traffic toward microtubule minus ends and are enriched near the centrosome. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
| lysosomal membrane | The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| specific granule membrane | The lipid bilayer surrounding a specific granule, a granule with a membranous, tubular internal structure, found primarily in mature neutrophil cells. Most are released into the extracellular fluid. Specific granules contain lactoferrin, lysozyme, vitamin B12 binding protein and elastase. |
| tertiary granule membrane | The lipid bilayer surrounding a tertiary granule. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium activated cation channel activity | Enables the calcium concentration-regulatable energy-independent passage of cations across a lipid bilayer down a concentration gradient. |
| mechanosensitive ion channel activity | Enables the transmembrane transfer of an ion by a channel that opens in response to a mechanical stress. |
| nucleic acid binding | Binding to a nucleic acid. |
| osmolarity-sensing cation channel activity | Enables the transmembrane transfer of a cation by a channel that opens when a change in the osmolarity occurs in the extracellular space of the cell in which the cation channel resides. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
9 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9P1W3 | TMEM63C | Calcium permeable stress-gated cation channel 1 | Homo sapiens (Human) | PR |
| Q5T3F8 | TMEM63B | CSC1-like protein 2 | Homo sapiens (Human) | PR |
| Q91YT8 | Tmem63a | CSC1-like protein 1 | Mus musculus (Mouse) | PR |
| Q94A87 | At1g10090 | CSC1-like protein At1g10090 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| B5TYT3 | At1g11960 | CSC1-like protein At1g11960 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| F4IBD7 | RXW8 | CSC1-like protein RXW8 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| F4HYR3 | At1g62320 | CSC1-like protein At1g62320 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9XEA1 | OSCA1 | Protein OSCA1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q5XEZ5 | CSC1 | Calcium permeable stress-gated cation channel 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MMDSPFLELW | QSKAVSIREQ | LGLGDRPNDS | YCYNSAKNST | VLQGVTFGGI | PTVLLIDVSC |
| 70 | 80 | 90 | 100 | 110 | 120 |
| FLFLILVFSI | IRRRFWDYGR | IALVSEADSE | SRFQRLSSTS | SSGQQDFENE | LGCCPWLTAI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| FRLHDDQILE | WCGEDAIHYL | SFQRHIIFLL | VVVSFLSLCV | ILPVNLSGDL | LDKDPYSFGR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TTIANLQTDN | DLLWLHTIFA | VIYLFLTVGF | MRHHTQSIKY | KEENLVRRTL | FITGLPRDAR |
| 250 | 260 | 270 | 280 | 290 | 300 |
| KETVESHFRD | AYPTCEVVDV | QLCYNVAKLI | YLCKEKKKTE | KSLTYYTNLQ | VKTGQRTLIN |
| 310 | 320 | 330 | 340 | 350 | 360 |
| PKPCGQFCCC | EVLGCEWEDA | ISYYTRMKDR | LLERITEEER | HVQDQPLGMA | FVTFQEKSMA |
| 370 | 380 | 390 | 400 | 410 | 420 |
| TYILKDFNAC | KCQSLQCKGE | PQPSSHSREL | YTSKWTVTFA | ADPEDICWKN | LSIQGLRWWL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| QWLGINFTLF | LGLFFLTTPS | IILSTMDKFN | VTKPIHALNN | PIISQFFPTL | LLWSFSALLP |
| 490 | 500 | 510 | 520 | 530 | 540 |
| SIVYYSTLLE | SHWTKSGENQ | IMMTKVYIFL | IFMVLILPSL | GLTSLDFFFR | WLFDKTSSEA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| SIRLECVFLP | DQGAFFVNYV | IASAFIGNGM | ELLRLPGLIL | YTFRMIMAKT | AADRRNVKQN |
| 610 | 620 | 630 | 640 | 650 | 660 |
| QAFQYEFGAM | YAWMLCVFTV | IVAYSITCPI | IAPFGLIYIL | LKHMVDRHNL | YFVYLPAKLE |
| 670 | 680 | 690 | 700 | 710 | 720 |
| KGIHFAAVNQ | ALAAPILCLF | WLYFFSFLRL | GMKAPATLFT | FLVLLLTILV | CLAHTCFGCF |
| 730 | 740 | 750 | 760 | 770 | 780 |
| KHLSPLNYKT | EEPASDKGSE | AEAHMPPPFT | PYVPRILNGL | ASERTALSPQ | QQQQQTYGAI |
| 790 | 800 | ||||
| HNISGTIPGQ | CLAQSATGSV | AAAPQEA |