B5TYT3
Gene name |
At1g11960 (F12F1.17) |
Protein name |
CSC1-like protein At1g11960 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G11960 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for B5TYT3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-B5TYT3-F1 | Predicted | AlphaFoldDB |
38 variants for B5TYT3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_1_4043095_T_C | 17 | T>A | No | 1000Genomes | |
| ENSVATH04561600 | 19 | I>T | No | 1000Genomes | |
| tmp_1_4042974_A_C | 57 | L>R | No | 1000Genomes | |
| ENSVATH00018848 | 77 | P>S | No | 1000Genomes | |
| tmp_1_4042047_G_A | 258 | L>F | No | 1000Genomes | |
| ENSVATH13882768 | 265 | Y>H | No | 1000Genomes | |
| ENSVATH11018084 | 271 | H>Q | No | 1000Genomes | |
| tmp_1_4041862_G_T | 292 | H>N | No | 1000Genomes | |
| tmp_1_4041844_C_G | 298 | E>Q | No | 1000Genomes | |
| tmp_1_4041838_A_T | 300 | L>I | No | 1000Genomes | |
| ENSVATH01038653 | 305 | M>L | No | 1000Genomes | |
| ENSVATH04561588 | 308 | R>K | No | 1000Genomes | |
| ENSVATH04561587 | 333 | A>V | No | 1000Genomes | |
| ENSVATH00018845 | 335 | S>C | No | 1000Genomes | |
| ENSVATH01038651 | 361 | S>P | No | 1000Genomes | |
| ENSVATH04561585 | 365 | I>V | No | 1000Genomes | |
| tmp_1_4041527_A_G | 377 | M>T | No | 1000Genomes | |
| tmp_1_4041167_T_A | 471 | N>Y | No | 1000Genomes | |
| ENSVATH04561581 | 490 | D>N | No | 1000Genomes | |
| ENSVATH01038648 | 517 | T>S | No | 1000Genomes | |
| tmp_1_4040913_T_C | 527 | I>V | No | 1000Genomes | |
| tmp_1_4040823_C_T | 557 | A>T | No | 1000Genomes | |
| tmp_1_4040673_G_C | 607 | Q>E | No | 1000Genomes | |
| ENSVATH11018079 | 626 | V>A | No | 1000Genomes | |
| tmp_1_4040427_A_C | 632 | S>A | No | 1000Genomes | |
| ENSVATH04561570 | 651 | A>V | No | 1000Genomes | |
| ENSVATH00018840 | 674 | R>W | No | 1000Genomes | |
| ENSVATH00018839 | 679 | F>L | No | 1000Genomes | |
| ENSVATH04561566 | 704 | K>R | No | 1000Genomes | |
| tmp_1_4040061_T_C | 709 | K>R | No | 1000Genomes | |
| tmp_1_4040030_G_T | 719 | N>K | No | 1000Genomes | |
| ENSVATH11018077 | 732 | Y>S | No | 1000Genomes | |
| tmp_1_4039975_C_G | 738 | D>H | No | 1000Genomes | |
| tmp_1_4039944_C_T | 748 | R>H | No | 1000Genomes | |
| ENSVATH04561565 | 749 | Q>R | No | 1000Genomes | |
| ENSVATH04561564 | 753 | N>I | No | 1000Genomes | |
| ENSVATH00018835 | 762 | R>H | No | 1000Genomes | |
| ENSVATH00018834 | 766 | R>C | No | 1000Genomes |
No associated diseases with B5TYT3
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium activated cation channel activity | Enables the calcium concentration-regulatable energy-independent passage of cations across a lipid bilayer down a concentration gradient. |
| calcium channel activity | Enables the facilitated diffusion of a calcium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| PAMP-triggered immunity signalling pathway | The series of molecular signals initiated by a ligand binding of a pattern recognition receptor (PRR) to activate a plant innate immune response. PAMP-triggered immunity PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species. |
| stomatal movement | The process of opening or closing of stomata, which is directly related to the stomatal conductance (measuring rate of passage of either water vapor or carbon dioxide (CO2) through stomata). |
9 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5T3F8 | TMEM63B | CSC1-like protein 2 | Homo sapiens (Human) | PR |
| Q9P1W3 | TMEM63C | Calcium permeable stress-gated cation channel 1 | Homo sapiens (Human) | PR |
| O94886 | TMEM63A | CSC1-like protein 1 | Homo sapiens (Human) | PR |
| Q91YT8 | Tmem63a | CSC1-like protein 1 | Mus musculus (Mouse) | PR |
| F4HYR3 | At1g62320 | CSC1-like protein At1g62320 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q5XEZ5 | CSC1 | Calcium permeable stress-gated cation channel 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q94A87 | At1g10090 | CSC1-like protein At1g10090 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9XEA1 | OSCA1 | Protein OSCA1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| F4IBD7 | RXW8 | CSC1-like protein RXW8 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MATLGDIGVA | AAINILTAII | FLLAFAILRI | QPFNDRVYFP | KWYLKGIRSS | PLHSGALVSK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| FVNVNLGSYL | RFLNWMPAAL | KMPEPELIDH | AGLDSAVYLR | IYLIGLKIFV | PIALLAWSIL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VPVNWTSHGL | QLAKLRNVTS | SDIDKLSISN | IENGSDRFWT | HLVMAYAFTF | WTCYVLMKEY |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EKVAAMRLAF | LQNEQRRPDQ | FTVLVRNVPA | DPDESISDSV | EHFFLVNHPD | HYLTHQVVYN |
| 250 | 260 | 270 | 280 | 290 | 300 |
| ANDLAALVEQ | KKSTQNWLDY | YQLKYTRNQE | HKPRIKTGFL | GLWGKKVDAI | DHYIAEIEKL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| NEQIMEERKK | VKKDDTSVMP | AAFVSFKTRW | GAAVSAQTQQ | SSDPTEWLTE | WAPEAREVFW |
| 370 | 380 | 390 | 400 | 410 | 420 |
| SNLAIPYVSL | TVRRLIMHIA | FFFLTFFFMI | PIAFVQSLAS | IEGIEKNAPF | LKSIIENDLF |
| 430 | 440 | 450 | 460 | 470 | 480 |
| KSVIQGFLPG | IVLKLFLIFL | PSILMVMSKF | EGFVSLSSLE | RRAAFRYYIF | NLINVFLGSV |
| 490 | 500 | 510 | 520 | 530 | 540 |
| ITGSAFEQLD | SFLKQSAKEI | PKTVGVAIPI | KATFFITYIM | VDGWAGIAGE | ILRLKPLIFF |
| 550 | 560 | 570 | 580 | 590 | 600 |
| HIKNSLLVKT | EKDREEAMNP | GQINYHATEP | RIQLYFLLGL | VYAPVTPVLL | PFIIIFFALA |
| 610 | 620 | 630 | 640 | 650 | 660 |
| YLVFRHQIIN | VYNQEYESAA | RFWPDVHGRI | ISALIIAQIL | LMGLLSTKGA | AQSTPFLLFL |
| 670 | 680 | 690 | 700 | 710 | 720 |
| PIITFFFHRY | CKGRYEPAFL | RHPLKEAMVK | DTLERAREPN | FNLKPYLQKA | YIHPVFKDND |
| 730 | 740 | 750 | 760 | 770 | |
| YEDSRFDEIS | GYCIEDSDEE | CVTVPTKRQS | RINTPAVSHA | SRGSSRSPPS | K |