O14939
Gene name |
PLD2 |
Protein name |
Phospholipase D2 |
Names |
PLD 2, hPLD2, Choline phosphatase 2, PLD1C, Phosphatidylcholine-hydrolyzing phospholipase D2 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:5338 |
EC number |
3.1.4.4: Phosphoric diester hydrolases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
7 structures for O14939
898 variants for O14939
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1597318172 CA397294205 |
3 | A>T | No |
ClinGen Ensembl |
|
|
rs760367867 CA8311066 |
3 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs375531613 CA287188221 |
4 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs375531613 CA8311067 |
4 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs752145178 CA287188228 |
5 | P>L | No |
ClinGen Ensembl |
|
|
rs1204727232 CA397294228 |
5 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1204727232 CA397294232 |
5 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA8311068 rs754281395 |
7 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397294271 rs1254286946 |
7 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs200329558 CA8311070 |
9 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1218510507 CA397294326 |
11 | T>A | No |
ClinGen TOPMed |
|
|
rs1363631356 CA397294332 |
11 | T>I | No |
ClinGen gnomAD |
|
|
CA397294400 rs1418392499 |
15 | L>R | No |
ClinGen gnomAD |
|
|
rs1197878739 CA397294405 |
16 | D>N | No |
ClinGen gnomAD |
|
|
CA397294430 rs1425146413 |
17 | S>A | No |
ClinGen TOPMed gnomAD |
|
|
CA8311071 rs750921799 |
17 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311072 rs750921799 |
17 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA287188301 rs901990677 |
18 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1039597777 CA287188293 |
18 | S>R | No |
ClinGen TOPMed |
|
|
CA8311073 rs780178145 |
19 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA8311074 rs139759528 |
20 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397294529 rs1404278136 |
24 | S>F | No |
ClinGen TOPMed |
|
|
CA8311076 rs781341198 |
25 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA8311077 rs749111588 |
26 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA8311079 rs778869066 |
29 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA8311080 rs778869066 |
29 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA8311083 rs775066708 |
32 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 34 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs150073459 CA8311085 |
35 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA397294706 rs1250249433 |
36 | P>R | No |
ClinGen gnomAD |
|
|
CA287188616 rs769506048 |
38 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311107 rs769506048 |
38 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773640188 CA397294794 |
39 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs763179321 CA8311109 |
41 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs974955480 CA287188620 |
41 | H>Y | No |
ClinGen Ensembl |
|
|
CA397294852 rs1219835462 |
42 | P>L | No |
ClinGen gnomAD |
|
|
CA8311112 rs759660201 |
45 | A>T | No |
ClinGen ExAC |
|
| TCGA novel | 46 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397294926 rs1220755203 |
47 | Y>C | No |
ClinGen gnomAD |
|
|
rs145402498 CA397294920 |
47 | Y>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs145402498 CA8311113 |
47 | Y>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA397294946 rs1259106627 |
48 | E>V | No |
ClinGen gnomAD |
|
|
CA8311114 rs752980957 |
49 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397294984 rs1219844950 |
50 | Q>R | No |
ClinGen gnomAD |
|
|
CA8311115 rs756329825 |
51 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs750267339 CA8311117 |
54 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397295055 rs758100452 |
55 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780092060 CA8311119 |
55 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758100452 CA8311118 |
55 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397295083 rs746932791 |
56 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA8311120 rs746932791 |
56 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA8311121 rs187259198 |
58 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs952528617 CA397295134 |
59 | F>L | No |
ClinGen TOPMed |
|
|
rs369078162 CA8311122 |
60 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA397295147 rs1268937904 |
60 | A>V | No |
ClinGen TOPMed |
|
|
rs1350356576 CA397295160 |
61 | P>R | No |
ClinGen gnomAD |
|
|
CA397295152 rs747603491 |
61 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311123 rs747603491 |
61 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1297633421 CA397295173 |
62 | G>V | No |
ClinGen gnomAD |
|
|
rs556574527 CA8311124 |
63 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs939322164 CA287188741 |
64 | P>L | No |
ClinGen gnomAD |
|
|
rs939322164 CA397295199 |
64 | P>R | No |
ClinGen gnomAD |
|
|
rs984190820 CA287188748 |
65 | V>F | No |
ClinGen TOPMed |
|
|
rs772699439 CA8311125 |
66 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1422791987 CA397295242 |
67 | A>D | No |
ClinGen TOPMed |
|
|
rs749701315 CA8311126 |
67 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs771175723 CA8311127 |
69 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA287188792 rs112526737 |
70 | V>L | No |
ClinGen Ensembl |
|
|
CA8311129 rs760028420 |
72 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1410339561 CA397295323 |
73 | E>K | No |
ClinGen TOPMed |
|
| TCGA novel | 74 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 75 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397295377 rs1421473073 |
75 | Y>C | No |
ClinGen TOPMed |
|
|
rs775555727 CA8311131 |
76 | T>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 76 | T>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 77 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1256303540 CA397295410 |
78 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs760709119 CA8311132 |
79 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| rs1183347106 | 80 | K>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8311149 rs149200635 |
81 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397295505 rs1168317171 |
82 | G>E | No |
ClinGen TOPMed |
|
|
rs369688232 CA8311150 |
84 | C>Y | No |
ClinGen ESP ExAC gnomAD |
|
|
CA397295541 rs1567523262 |
86 | L>P | No |
ClinGen Ensembl |
|
|
CA8311151 rs200755009 |
87 | Y>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA397295556 rs1241568783 |
89 | V>L | No |
ClinGen gnomAD |
|
|
rs540125550 CA8311152 |
90 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373143377 COSM1663551 COSM1663550 CA8311153 |
90 | R>H | kidney [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA8311154 rs765443043 |
91 | L>* | No |
ClinGen ExAC gnomAD |
|
|
rs1178429456 CA397295584 |
93 | H>D | No |
ClinGen TOPMed |
|
|
CA8311156 rs759364410 |
93 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397295597 rs1423936539 |
94 | G>S | No |
ClinGen TOPMed |
|
|
CA8311158 rs752658400 |
97 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs866397263 CA287188990 |
99 | T>K | No |
ClinGen Ensembl |
|
|
CA8311159 rs755706304 |
102 | K>E | No |
ClinGen ExAC |
|
|
rs147907598 CA8311160 |
104 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs564771972 CA287189023 |
105 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397295715 rs1198452343 |
105 | R>H | No |
ClinGen TOPMed |
|
|
CA8311161 rs564771972 |
105 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 108 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 109 | E>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1462011180 CA397295767 |
109 | E>D | No |
ClinGen TOPMed |
|
|
CA397295762 rs1477051053 |
109 | E>G | No |
ClinGen gnomAD |
|
|
CA397295789 rs756870034 |
112 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1493936 rs1018879466 COSM1493937 CA287189045 |
112 | R>Q | kidney [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA8311162 rs756870034 |
112 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778484982 CA8311163 |
113 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1567523398 CA397295810 |
114 | L>H | No |
ClinGen Ensembl |
|
|
CA8311165 rs772407427 |
114 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307854133 CA397295857 |
118 | K>N | No |
ClinGen TOPMed |
|
|
CA8311168 rs769141526 |
120 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1322594774 CA397295880 |
121 | M>V | No |
ClinGen gnomAD |
|
|
rs141608832 CA8311170 |
123 | L>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1437937539 CA397295915 |
124 | L>F | No |
ClinGen gnomAD |
|
|
rs974671153 CA287189093 |
125 | P>L | No |
ClinGen Ensembl |
|
|
CA397295930 rs1316895002 |
126 | L>V | No |
ClinGen gnomAD |
|
|
rs773535239 CA8311172 |
127 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773535239 CA397295935 |
127 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311173 rs147037301 |
128 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8311174 rs147037301 |
128 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs752746653 CA8311175 |
128 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752746653 CA397295939 |
128 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA397296806 rs1360462216 |
129 | F>L | No |
ClinGen gnomAD |
|
|
CA287189742 rs373362915 |
130 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA8311197 rs373362915 |
130 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs368398511 CA8311198 |
131 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761292236 CA8311199 |
133 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA287189766 rs759915138 |
134 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1458319184 COSM707026 CA397296854 COSM707027 |
136 | A>V | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA8311201 rs749871243 |
137 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8311202 rs758060555 |
137 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311203 rs376928267 |
138 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751900808 CA8311204 |
140 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311205 rs751900808 |
140 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311206 rs781597197 |
141 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA8311207 rs748674984 |
142 | R>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 142 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8311208 rs569703764 |
144 | M>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1486307724 CA397296940 |
145 | P>L | No |
ClinGen gnomAD |
|
|
CA287189795 rs749320592 |
148 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311210 rs749320592 |
148 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778003297 CA8311209 |
148 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774588654 CA8311212 |
149 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1384419 COSM1384420 CA8311211 rs141836960 |
149 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs768487562 CA397296975 |
150 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs768487562 CA8311214 |
150 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1477450842 CA397296982 |
151 | G>C | No |
ClinGen TOPMed |
|
| TCGA novel | 152 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397297011 rs1192406173 |
154 | G>S | No |
ClinGen TOPMed |
|
|
CA287189848 rs978950864 |
156 | T>I | No |
ClinGen TOPMed |
|
|
rs1453048583 CA397297057 |
158 | H>R | No |
ClinGen gnomAD |
|
|
rs367595923 CA397297071 |
159 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs367595923 CA8311218 |
159 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397297087 rs777584661 |
161 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311220 rs777584661 |
161 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1324875950 CA397297095 |
162 | K>Q | No |
ClinGen TOPMed |
|
|
CA397297191 rs1408366424 |
164 | K>E | No |
ClinGen gnomAD |
|
|
rs746077034 CA287189988 |
165 | Y>* | No |
ClinGen Ensembl |
|
|
rs557038351 CA8311249 |
166 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8311250 rs764736363 |
167 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs1412887658 CA397297300 |
170 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1336535887 CA397297326 |
171 | N>K | No |
ClinGen gnomAD |
|
|
CA8311251 rs202012648 |
171 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
VAR_051704 CA8311252 rs2286672 |
172 | R>C | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8311253 rs779056522 |
172 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs553684559 CA287190041 |
176 | M>K | No |
ClinGen gnomAD |
|
|
rs138074240 CA8311256 |
180 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA287190055 rs138074240 |
180 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8311257 rs199632590 |
180 | R>H | Variant assessed as Somatic; 0.000231 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA287190069 rs546334143 |
182 | Y>C | No |
ClinGen Ensembl |
|
|
CA397297494 rs1178448240 |
182 | Y>D | No |
ClinGen TOPMed |
|
|
rs1338742757 CA397297538 |
184 | A>V | No |
ClinGen gnomAD |
|
|
rs747978116 CA8311258 |
185 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs908889328 CA287190074 |
185 | M>V | No |
ClinGen Ensembl |
|
|
CA397297675 rs1482121239 |
188 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
rs775338108 CA8311283 COSM1679404 COSM1679405 |
188 | F>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA397297730 rs1439059927 |
192 | S>C | No |
ClinGen gnomAD |
|
|
rs892476023 CA287190193 |
192 | S>N | No |
ClinGen Ensembl |
|
|
CA8311285 rs768368204 |
193 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1402526886 CA397297822 |
197 | I>T | No |
ClinGen gnomAD |
|
|
rs149515162 CA8311286 |
198 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA397297846 rs1358824202 |
199 | D>N | No |
ClinGen gnomAD |
|
|
CA397297877 rs1567524627 |
201 | G>R | No |
ClinGen Ensembl |
|
|
COSM1221001 CA397297890 COSM1221000 rs1446217328 |
202 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA8311288 rs368249657 |
202 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs368249657 CA8311289 |
202 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8311290 rs145989174 |
203 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397297900 rs1240138795 |
203 | K>R | No |
ClinGen gnomAD |
|
|
CA397297926 rs1223867657 |
205 | L>P | No |
ClinGen gnomAD |
|
|
CA8311319 rs780103529 |
206 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA397298005 rs1430265777 |
207 | G>W | No |
ClinGen gnomAD |
|
|
rs754515103 CA8311321 |
209 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200299754 CA8311323 COSM1640726 COSM1640725 |
210 | R>Q | stomach [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA8311322 COSM2698104 COSM2698103 rs536220000 |
210 | R>W | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
rs375978258 CA8311324 |
212 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs375978258 CA397298071 |
212 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778011856 CA8311325 |
212 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311326 rs749614832 |
213 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA397298102 rs1216531398 |
214 | G>D | No |
ClinGen gnomAD |
|
|
CA8311328 rs774808753 |
214 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 215 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 216 | H>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8311331 rs772123505 |
216 | H>Y | Variant assessed as Somatic; 4.623e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8311332 rs572927123 |
217 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8311333 rs572927123 |
217 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs764330423 CA8311334 |
217 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs750220547 CA8311335 |
218 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs574038745 CA8311336 |
220 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA287190461 rs574038745 |
220 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA397298192 rs1477641486 |
221 | L>F | No |
ClinGen gnomAD |
|
|
rs1191460915 CA397298203 |
221 | L>R | No |
ClinGen gnomAD |
|
|
rs751530331 CA8311338 |
224 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751530331 CA397298246 |
224 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 225 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397298268 rs1163126995 |
226 | R>* | No |
ClinGen gnomAD |
|
|
CA397298269 rs1163126995 |
226 | R>G | No |
ClinGen gnomAD |
|
|
rs139869509 CA8311339 |
226 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8311341 rs780574072 |
227 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA397298283 rs1425957852 |
227 | D>H | No |
ClinGen gnomAD |
|
|
rs754487632 CA287190491 |
228 | Q>E | No |
ClinGen Ensembl |
|
|
rs1180239347 CA397298309 |
228 | Q>P | No |
ClinGen TOPMed |
|
|
rs752191637 CA8311342 |
229 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA8311343 rs373488861 |
230 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8311345 rs749693601 |
231 | Y>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 231 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8311346 rs771259066 |
232 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA397298394 rs1361542635 |
232 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA397298404 rs1248225769 |
233 | W>* | No |
ClinGen gnomAD |
|
|
rs1292659568 CA397298411 |
233 | W>* | No |
ClinGen gnomAD |
|
|
CA287190650 rs986580116 |
239 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA8311367 rs746185534 |
240 | V>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 242 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA287190673 COSM1221009 COSM1221008 rs945244094 |
243 | S>F | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA287190664 rs913767561 |
243 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA397298740 rs1238119587 |
245 | L>V | No |
ClinGen gnomAD |
|
|
rs141585465 CA8311370 |
246 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA287190691 rs917627229 |
247 | Y>N | No |
ClinGen Ensembl |
|
|
CA8311372 rs777060973 |
248 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA397298805 rs1173973914 |
248 | M>T | No |
ClinGen gnomAD |
|
|
CA8311373 rs748388055 |
249 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs970768452 CA287190706 |
250 | L>F | No |
ClinGen Ensembl |
|
|
rs759334308 CA8311376 |
251 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA8311375 rs758922973 |
251 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs368961685 CA8311377 |
256 | S>P | No |
ClinGen ESP ExAC gnomAD |
|
|
rs374346852 CA8311378 |
257 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397298945 rs374346852 |
257 | F>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8311379 rs370537823 |
259 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370537823 CA287190746 |
259 | Q>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397298989 rs1238432448 |
260 | L>F | No |
ClinGen TOPMed |
|
|
rs1450896886 CA397299050 |
263 | P>L | No |
ClinGen TOPMed |
|
|
CA397299044 rs1232891924 |
263 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs763651895 CA397299083 |
266 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311380 rs763651895 |
266 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753275339 CA8311381 |
267 | V>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 269 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397299140 rs1178409201 |
270 | G>E | No |
ClinGen gnomAD |
|
|
rs377745964 CA8311384 CA8311385 |
270 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8311387 rs370830303 |
274 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8311389 rs781436206 |
275 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748191924 CA8311390 |
276 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs1473764799 CA397299204 |
276 | A>T | No |
ClinGen TOPMed |
|
|
CA287190821 rs752546625 |
277 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs752546625 CA287190815 |
277 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA8311391 rs767086719 |
277 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745698306 CA397299225 |
278 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311392 RCV000961453 rs139166795 |
278 | H>Y | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA287190843 rs202025358 |
279 | G>D | No |
ClinGen 1000Genomes |
|
|
rs771887423 CA8311394 |
279 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1263831051 CA397299241 |
280 | V>A | No |
ClinGen gnomAD |
|
|
rs760662418 CA8311396 |
280 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311397 rs768519666 |
281 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA287190869 rs763871135 |
281 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311398 rs763871135 |
281 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397299245 rs768519666 |
281 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311401 rs200094300 |
283 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200094300 CA8311400 |
283 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 284 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8311402 rs763293763 |
284 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763293763 CA397299301 |
284 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766771900 CA8311403 |
286 | H>N | No |
ClinGen ExAC gnomAD |
|
|
CA397299335 rs1270552855 |
287 | R>G | No |
ClinGen gnomAD |
|
|
CA397299449 rs867028475 |
288 | S>F | No |
ClinGen TOPMed |
|
|
CA287191567 rs867028475 |
288 | S>Y | No |
ClinGen TOPMed |
|
|
CA397299474 rs1317779277 |
290 | I>V | No |
ClinGen gnomAD |
|
|
rs756328314 CA8311425 |
291 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs1222725773 CA397299504 |
292 | K>* | No |
ClinGen gnomAD |
|
|
CA397299503 rs1222725773 |
292 | K>E | No |
ClinGen gnomAD |
|
|
rs1281652544 CA397299526 |
293 | C>R | No |
ClinGen gnomAD |
|
|
rs142502170 CA8311426 |
294 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8311427 rs753799641 |
294 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA287191630 rs193180262 |
296 | Y>C | No |
ClinGen 1000Genomes |
|
|
CA8311429 rs778974047 |
297 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311428 rs757519454 |
297 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397299627 rs1597323174 |
299 | A>G | No |
ClinGen Ensembl |
|
| TCGA novel | 300 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200040841 CA8311434 |
300 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200040841 CA8311433 |
300 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8311432 rs554386438 |
300 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs748710430 CA8311436 |
301 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs1597323211 CA397299642 |
301 | W>G | No |
ClinGen Ensembl |
|
|
CA397299663 rs1468577453 |
302 | W>* | No |
ClinGen gnomAD |
|
|
rs1597323222 CA397299659 |
302 | W>G | No |
ClinGen Ensembl |
|
|
rs770654939 CA8311437 |
303 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs918577941 CA287191740 |
304 | Q>E | No |
ClinGen Ensembl |
|
|
CA397299695 rs1597323245 |
304 | Q>P | No |
ClinGen Ensembl |
|
|
rs950389389 CA287191745 |
305 | E>G | No |
ClinGen Ensembl |
|
|
CA397299737 rs1440798554 |
306 | I>T | No |
ClinGen gnomAD |
|
|
rs1045974616 CA287191746 |
310 | A>T | No |
ClinGen Ensembl |
|
|
rs1488395426 CA397299808 |
311 | Q>* | No |
ClinGen TOPMed |
|
|
rs760033223 CA8311439 |
312 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767985940 CA8311440 |
312 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA397299822 rs760033223 |
312 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397299821 rs760033223 |
312 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775929272 CA8311441 |
313 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA287191795 rs927461981 |
314 | G>S | No |
ClinGen gnomAD |
|
|
rs1285231898 CA397299862 |
315 | R>G | No |
ClinGen TOPMed |
|
|
rs1263645687 CA397299867 |
315 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA397299914 rs1235228017 |
317 | F>Y | No |
ClinGen TOPMed |
|
|
CA397299944 rs1597323332 |
318 | L>Q | No |
ClinGen Ensembl |
|
|
CA287191801 rs781131946 |
319 | Q>L | No |
ClinGen gnomAD |
|
|
rs781131946 CA397299954 |
319 | Q>P | No |
ClinGen gnomAD |
|
|
CA8311446 rs371796657 |
321 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA287191810 rs1054893608 |
321 | H>Y | No |
ClinGen gnomAD |
|
|
rs765555533 CA8311448 |
322 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311447 rs757264558 |
322 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1010641235 CA287191847 |
325 | S>N | No |
ClinGen gnomAD |
|
|
CA8311451 rs201456058 |
327 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397300171 rs1567526507 |
329 | P>L | No |
ClinGen Ensembl |
|
|
CA8311452 rs747892207 |
329 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774472411 CA8311445 |
330 | R>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 330 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV000885845 CA8311454 rs147737574 |
330 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs752760973 CA287191878 |
330 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8311455 rs748875349 |
332 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1193932160 CA397300285 |
335 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8311457 rs149827932 |
336 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs745515447 CA8311459 |
336 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311458 rs745515447 COSM1221002 COSM1221003 |
336 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA8311456 rs149827932 |
336 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs762240838 CA8311482 |
339 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs773315677 CA8311484 |
342 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA397301789 rs1162368735 |
343 | G>C | No |
ClinGen gnomAD |
|
|
CA397301813 rs1382778789 |
344 | Y>C | No |
ClinGen gnomAD |
|
| TCGA novel | 345 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397301847 rs1294886116 |
346 | A>P | No |
ClinGen TOPMed |
|
|
CA8311487 rs751764553 |
347 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1380279496 CA397301869 |
347 | A>V | No |
ClinGen gnomAD |
|
|
CA397301894 rs1227709627 |
349 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1451910421 CA397301899 |
349 | A>V | No |
ClinGen gnomAD |
|
|
CA8311489 rs377694883 |
351 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397301923 rs1283901104 |
351 | A>V | No |
ClinGen gnomAD |
|
|
CA397301951 rs1357305913 |
354 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA8311490 rs187591759 |
354 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1266222283 CA397301958 |
355 | A>T | No |
ClinGen gnomAD |
|
|
rs757164436 CA8311491 |
357 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs191478800 CA8311492 |
358 | E>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8311494 rs757958465 |
358 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs191478800 CA8311493 |
358 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs141749888 CA287194649 |
361 | I>F | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs141749888 CA397302054 |
361 | I>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA8311496 rs746646338 |
362 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746646338 CA287194662 |
362 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311499 rs374089475 |
363 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs768297268 CA8311497 |
363 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs770247546 CA8311500 |
364 | W>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1324961 CA8311502 rs200410286 COSM1324962 |
364 | W>L | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs200410286 CA8311501 |
364 | W>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs756460341 CA8311518 |
365 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA8311519 rs778317263 |
366 | L>W | No |
ClinGen ExAC gnomAD |
|
|
CA8311520 rs760975506 |
370 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311521 rs555990781 |
372 | L>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8311522 rs200449808 |
374 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs745921406 CA8311523 |
374 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311524 rs772222355 |
375 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA287194853 rs566398834 |
379 | D>G | No |
ClinGen Ensembl |
|
|
CA8311526 rs376696630 |
380 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397302537 rs1159934398 |
380 | D>Y | No |
ClinGen TOPMed |
|
|
CA8311527 rs765129245 |
381 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs773085003 CA8311528 |
382 | R>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1384431 rs763007494 COSM1384432 CA8311529 |
385 | I>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs766383024 CA8311530 |
386 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA397302658 rs1597328305 |
388 | K>R | No |
ClinGen Ensembl |
|
|
rs754491188 CA8311532 |
389 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761911354 CA8311533 |
391 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs776879666 CA287142115 |
392 | E>K | No |
ClinGen Ensembl |
|
|
CA397253902 rs1132448 |
393 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs372240941 CA8311559 |
396 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758774869 CA8311560 |
396 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780206723 CA8311561 |
397 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA397253959 rs372533526 |
399 | I>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8311563 rs372533526 |
399 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781546553 CA8311564 |
400 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA8311565 rs200324134 |
405 | V>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 406 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1222781974 CA397254155 |
414 | G>S | No |
ClinGen gnomAD |
|
|
rs771852135 CA8311569 |
414 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA8311571 rs760146633 |
415 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs763785091 CA8311572 |
416 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA397254228 rs1567530328 |
419 | A>S | No |
ClinGen Ensembl |
|
|
CA8311574 rs199737765 COSM1709619 COSM1709620 |
419 | A>V | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs984884885 CA287142158 |
421 | M>L | No |
ClinGen Ensembl |
|
|
CA8311576 rs750705801 |
424 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311577 rs758975991 |
425 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA8311578 rs780394295 |
426 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397254325 rs143222056 |
427 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8311579 rs143222056 |
427 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397254337 rs1411292269 |
428 | K>N | No |
ClinGen TOPMed |
|
|
CA287142365 rs1000375351 |
429 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs763206181 CA8311595 |
430 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397254392 rs1372011854 |
431 | R>C | No |
ClinGen gnomAD |
|
|
rs766972125 CA8311596 |
431 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767715673 CA8311599 |
432 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA8311598 rs755478411 |
432 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397254426 rs1024279823 |
434 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA287142374 rs1024279823 |
434 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA8311601 rs375121292 |
435 | Q>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1272652914 CA397254439 |
436 | V>G | No |
ClinGen gnomAD |
|
|
CA8311602 rs777822488 |
437 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
|
rs866688405 CA287142388 |
439 | W>* | No |
ClinGen Ensembl |
|
|
rs1268471840 CA397254456 |
439 | W>G | No |
ClinGen gnomAD |
|
| TCGA novel | 444 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs982623254 CA287142399 |
445 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1247780174 CA397254508 |
446 | L>P | No |
ClinGen gnomAD |
|
|
CA8311605 rs201836893 |
447 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1429848677 CA397254519 |
448 | V>A | No |
ClinGen gnomAD |
|
|
CA287142436 rs909817173 |
450 | Q>R | No |
ClinGen TOPMed |
|
|
rs1227964445 CA397254540 |
451 | V>A | No |
ClinGen gnomAD |
|
|
CA397254570 rs1361007320 |
456 | G>E | No |
ClinGen TOPMed |
|
|
rs1428470904 CA397254567 |
456 | G>R | No |
ClinGen gnomAD |
|
| rs753325116 | 457 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM302941 rs772730141 CA8311612 COSM302940 |
457 | G>R | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs763445487 CA397254584 |
459 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA8311613 rs763445487 |
459 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs774802157 CA8311615 |
462 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs774802157 CA397254606 |
462 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs768094593 CA8311617 |
463 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA8311618 rs558449929 |
464 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs756122541 CA8311619 |
464 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397254614 rs558449929 |
464 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1005961415 CA287142486 |
465 | W>* | No |
ClinGen Ensembl |
|
|
rs752087731 CA287142490 COSM170800 |
471 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs752087731 CA397254663 |
471 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA8311620 rs148063814 |
471 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA397254666 rs1449505657 |
472 | L>M | No |
ClinGen gnomAD |
|
|
CA397254670 rs1182494064 |
472 | L>R | No |
ClinGen gnomAD |
|
|
CA8311621 rs754000794 |
473 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1597330097 CA397254693 |
476 | G>E | No |
ClinGen Ensembl |
|
|
CA397254696 rs1163484127 |
477 | D>N | No |
ClinGen gnomAD |
|
|
rs757433748 CA8311622 |
478 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1398760316 CA397254715 |
480 | E>K | No |
ClinGen gnomAD |
|
|
rs986962482 CA287142507 |
481 | S>* | No |
ClinGen TOPMed gnomAD |
|
|
CA8311623 rs779836681 |
481 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1314530934 CA397254742 |
484 | S>F | No |
ClinGen gnomAD |
|
|
CA8311647 rs752583572 |
487 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1597331163 CA397254773 |
488 | T>P | No |
ClinGen Ensembl |
|
|
rs200699572 CA8311648 |
489 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8311649 rs200699572 |
489 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA397254781 rs1597331170 |
489 | P>S | No |
ClinGen Ensembl |
|
|
CA8311651 RCV000882875 rs115426183 |
490 | R>C | No |
ClinGen ClinVar 1000Genomes ESP TOPMed dbSNP gnomAD |
|
|
CA8311652 rs115426183 |
490 | R>G | No |
ClinGen 1000Genomes ESP TOPMed gnomAD |
|
|
rs770743350 CA8311655 |
490 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311654 rs770743350 |
490 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770743350 CA397254784 |
490 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1038418088 CA287142921 |
492 | D>E | No |
ClinGen TOPMed |
|
|
CA8311656 rs746289087 |
494 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs772558988 CA8311657 |
495 | A>T | No |
ClinGen ExAC |
|
|
CA8311658 rs775854559 |
496 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA8311661 rs776616081 |
497 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769157537 CA8311660 |
497 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 498 | D>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1483471069 CA397254848 |
498 | D>V | No |
ClinGen TOPMed |
|
|
CA397254872 rs1257466875 |
500 | S>C | No |
ClinGen TOPMed |
|
|
CA397254895 rs1308187669 |
502 | N>S | No |
ClinGen Ensembl |
|
|
CA8311665 rs750641014 |
503 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA8311664 rs750641014 |
503 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs767232237 CA287142933 |
503 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311667 rs370414862 |
504 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397254928 rs1386594037 |
505 | F>S | No |
ClinGen gnomAD |
|
|
rs1241734438 CA397254924 |
505 | F>V | No |
ClinGen TOPMed |
|
|
rs1299781375 CA397254942 |
506 | W>L | No |
ClinGen TOPMed gnomAD |
|
|
rs756034025 CA8311668 |
509 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs777730807 CA8311669 |
510 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397254984 rs1452864558 |
510 | D>V | No |
ClinGen TOPMed |
|
|
rs753445128 CA8311670 |
511 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs1206788823 CA397255004 |
512 | S>N | No |
ClinGen gnomAD |
|
|
rs756812285 CA8311671 |
513 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA397255024 rs1597331408 |
514 | L>F | No |
ClinGen Ensembl |
|
|
CA397255028 rs1490114704 |
514 | L>P | No |
ClinGen gnomAD |
|
|
rs778772977 CA8311672 |
515 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA287142964 rs906218184 |
517 | K>M | No |
ClinGen Ensembl |
|
|
rs1049651462 CA287142966 |
519 | W>* | No |
ClinGen TOPMed |
|
|
CA397255106 rs1597331432 |
520 | V>G | No |
ClinGen Ensembl |
|
|
CA8311674 rs370458918 |
521 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397255132 rs1160943336 |
522 | L>R | No |
ClinGen TOPMed |
|
|
rs769092786 CA8311677 |
524 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1563765 CA8311676 COSM1563766 rs747369203 |
524 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs145073180 CA8311678 |
525 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8311680 rs769869285 |
527 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760450833 CA8311705 |
530 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs774617150 CA397255324 |
530 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs774617150 CA8311704 |
530 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA8311706 rs763953120 |
531 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs776508601 CA8311707 |
532 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA8311708 rs375708016 |
534 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751230743 CA8311713 |
537 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs368875671 CA8311712 |
537 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397255531 rs1358021090 |
538 | M>I | No |
ClinGen gnomAD |
|
|
rs1321819957 CA397255512 |
538 | M>L | No |
ClinGen gnomAD |
|
|
CA8311714 rs754532456 |
540 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311715 rs551249099 |
541 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1304189593 CA397255592 |
541 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs375128256 CA8311716 |
542 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756658452 CA8311717 |
543 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA397255638 rs1286300046 |
543 | V>I | No |
ClinGen gnomAD |
|
|
rs1286300046 CA397255642 |
543 | V>L | No |
ClinGen gnomAD |
|
|
CA397255665 rs778227448 |
544 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA8311718 rs778227448 |
544 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs1597331947 CA397255681 |
545 | V>G | No |
ClinGen Ensembl |
|
| TCGA novel | 545 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397255674 rs1208880003 |
545 | V>M | No |
ClinGen TOPMed |
|
|
CA397255715 rs1486157435 |
547 | V>D | No |
ClinGen gnomAD |
|
|
rs138719274 CA8311722 |
547 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8311723 rs772134492 |
548 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA287143233 rs772134492 |
548 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311724 rs776598770 |
549 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA397255757 rs1473787450 |
550 | L>P | No |
ClinGen gnomAD |
|
|
rs372741803 CA8311726 |
551 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000896044 CA8311728 rs146224113 |
553 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs386352350 CA232215 RCV000122502 |
553 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
| TCGA novel | 554 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397255823 rs1305813158 |
556 | A>T | No |
ClinGen gnomAD |
|
|
CA8311731 rs759266914 |
557 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750987484 CA8311730 |
557 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA397255926 rs1329528932 |
561 | Q>* | No |
ClinGen TOPMed |
|
|
CA397255941 rs1342850053 |
561 | Q>H | No |
ClinGen gnomAD |
|
|
CA8311733 rs376037007 |
562 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs189140524 CA287143301 |
562 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs189140524 CA8311734 |
562 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA397255974 rs1597332090 |
563 | W>L | No |
ClinGen Ensembl |
|
|
rs1348699157 CA397255967 |
563 | W>R | No |
ClinGen gnomAD |
|
|
CA8311736 rs754372361 |
566 | T>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 567 | K>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8311755 RCV000915240 rs137971062 |
569 | T>A | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs137971062 CA287143376 |
569 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8311756 rs750564597 |
570 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs758547868 CA287143379 |
571 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs758547868 CA8311757 |
571 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1391643105 CA397256206 |
572 | K>E | No |
ClinGen gnomAD |
|
|
rs1172910737 CA397256211 |
572 | K>R | No |
ClinGen TOPMed |
|
| TCGA novel | 574 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1162274532 CA397256270 |
575 | T>S | No |
ClinGen gnomAD |
|
|
rs1052748 VAR_051705 CA8311759 |
577 | T>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs768952415 CA397256331 |
578 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs1387757287 CA397256341 |
579 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1387757287 CA397256335 |
579 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs761106088 CA8311762 |
580 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397256360 rs1597332343 |
580 | Y>F | No |
ClinGen Ensembl |
|
|
rs1228505655 CA397256440 |
585 | S>F | No |
ClinGen gnomAD |
|
|
rs745444968 CA397256455 |
586 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745444968 CA8311765 |
586 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs923882372 CA287143428 |
587 | S>G | No |
ClinGen Ensembl |
|
|
CA8311766 rs763604161 |
588 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200620430 CA8311768 |
590 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 595 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763695132 CA8311769 |
596 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA397256635 rs777092300 |
597 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777092300 CA8311772 |
597 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311771 rs777092300 |
597 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750899742 CA8311776 |
598 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA8311775 rs750899742 |
598 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs368012043 CA8311774 |
598 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8311777 rs766590486 |
599 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA287143528 rs912532579 |
600 | Q>H | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 601 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs371269918 CA8311780 |
604 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs755100012 CA8311799 |
607 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311800 rs767851614 |
608 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs752863403 CA8311801 |
608 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA8311802 COSM1221004 rs752863403 COSM1221005 |
608 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
COSM980730 CA8311803 rs778592024 COSM980728 |
612 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA8311804 rs199707726 |
612 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397257768 rs199707726 |
612 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311806 rs779943149 |
613 | W>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397257799 rs200658185 |
614 | S>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200658185 CA8311807 |
614 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA287144259 rs1007462854 |
617 | T>S | No |
ClinGen TOPMed |
|
|
rs780695338 CA8311809 |
623 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA397257890 rs1173214241 |
624 | N>D | No |
ClinGen gnomAD |
|
|
rs374865981 CA8311810 |
624 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397257896 rs1597333927 |
625 | A>T | No |
ClinGen Ensembl |
|
|
CA397257905 rs1386765019 |
626 | Y>C | No |
ClinGen gnomAD |
|
|
CA8311811 rs769449979 |
626 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs773753942 CA8311812 |
628 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs369422714 CA8311813 |
629 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397257926 rs1234331625 |
630 | I>L | No |
ClinGen gnomAD |
|
|
rs17854914 CA397257944 |
632 | E>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8311814 rs17854914 VAR_061750 |
632 | E>G | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs376931060 CA8311815 |
635 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8311816 rs760016668 |
637 | L>H | No |
ClinGen ExAC gnomAD |
|
|
CA287144334 rs868382399 |
638 | Y>C | No |
ClinGen Ensembl |
|
| TCGA novel | 638 | Y>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8311817 rs148798513 |
639 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1031105679 CA287144363 |
640 | E>A | No |
ClinGen TOPMed |
|
|
CA397258023 rs1377923401 |
642 | Q>K | No |
ClinGen gnomAD |
|
|
rs1294975227 CA397258037 |
643 | F>L | No |
ClinGen gnomAD |
|
|
CA8311845 rs754910484 |
643 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs1335223322 CA397258047 |
645 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA287144598 rs942926409 |
646 | S>I | No |
ClinGen TOPMed |
|
|
rs1227762436 CA397258073 |
648 | S>L | No |
ClinGen gnomAD |
|
|
CA8311848 rs374092359 |
651 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201516383 CA8311847 |
651 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1026647695 CA287144616 |
652 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs777349144 CA397258103 |
654 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397258119 rs1182135202 |
656 | K>R | No |
ClinGen gnomAD |
|
|
rs748966619 CA397258132 |
658 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs748966619 CA8311850 |
658 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA397258136 rs1358068992 |
659 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1371548660 CA397258154 |
661 | I>T | No |
ClinGen TOPMed |
|
|
rs1464286166 CA397258171 |
664 | R>G | No |
ClinGen gnomAD |
|
|
rs1314310218 CA397258188 |
666 | L>P | No |
ClinGen gnomAD |
|
|
CA397258204 rs1286403162 |
669 | H>N | No |
ClinGen TOPMed gnomAD |
|
|
CA397258208 rs1377774400 |
669 | H>R | No |
ClinGen TOPMed |
|
|
CA397258232 rs1484711531 |
671 | Q>* | No |
ClinGen TOPMed |
|
|
CA397258233 rs1484711531 |
671 | Q>E | No |
ClinGen TOPMed |
|
|
CA397258236 rs1234344761 |
671 | Q>R | No |
ClinGen TOPMed |
|
|
rs375305590 CA287144885 |
672 | G>E | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs764094836 CA8311886 CA397258241 |
672 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1228011126 CA397258245 |
673 | W>R | No |
ClinGen gnomAD |
|
|
CA397258260 rs1268848107 |
674 | C>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1268607449 CA397258256 |
674 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA8311888 rs761395374 |
676 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397258269 rs761395374 |
676 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311889 rs199553650 |
676 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8311890 rs199553650 |
676 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1467474016 CA397258274 |
677 | V>D | No |
ClinGen gnomAD |
|
|
CA8311891 rs757930649 |
678 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs780394033 CA8311894 |
679 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311893 rs780394033 |
679 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1190624661 CA397258288 |
680 | L>I | No |
ClinGen gnomAD |
|
|
CA8311896 rs147534454 |
686 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1165539234 CA397258342 |
688 | E>G | No |
ClinGen gnomAD |
|
|
rs777652802 CA8311898 |
688 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA8311899 rs749543174 |
689 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1395368952 CA397258348 |
689 | G>S | No |
ClinGen gnomAD |
|
|
rs374713210 CA8311900 |
690 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374713210 CA397258354 |
690 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368220284 CA8311903 |
691 | I>M | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
CA8311902 rs760527866 |
691 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA8311905 rs116011301 COSM980736 |
693 | T>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs116011301 CA8311904 |
693 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8311908 rs762705867 |
695 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs751976853 CA8311910 |
698 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA287145002 rs1012776638 |
698 | S>T | No |
ClinGen Ensembl |
|
|
rs755328283 CA8311911 |
699 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs1255205828 CA397258409 |
700 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1255205828 CA397258408 |
700 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
CA8311912 rs781465757 |
700 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8311914 rs145037801 |
704 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 708 | R>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397258485 rs1234568256 |
709 | T>N | No |
ClinGen gnomAD |
|
|
CA397258482 rs1597335402 |
709 | T>P | No |
ClinGen Ensembl |
|
|
CA8311940 COSM436799 rs747873909 COSM436798 |
712 | R>C | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA8311941 rs769825363 |
712 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA287145288 rs773017795 |
714 | E>D | No |
ClinGen ExAC TOPMed |
|
|
rs935533782 CA287145293 |
715 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA287145292 rs922840410 |
715 | Y>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1193019938 CA397258528 |
716 | S>L | No |
ClinGen gnomAD |
|
|
CA397258532 rs1393502950 |
717 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA8311946 rs759214673 |
718 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA8311947 rs537960609 |
720 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1397763227 CA397258551 |
720 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs939690396 CA287145328 |
723 | A>T | No |
ClinGen Ensembl |
|
|
CA397258595 rs1414781472 |
725 | M>I | No |
ClinGen gnomAD |
|
|
rs908320553 CA287145679 |
725 | M>R | No |
ClinGen Ensembl |
|
|
rs939742678 CA287145681 |
727 | T>R | No |
ClinGen gnomAD |
|
|
CA397258606 rs1262930482 |
727 | T>S | No |
ClinGen gnomAD |
|
|
CA397258609 rs1205083960 |
728 | A>T | No |
ClinGen TOPMed |
|
|
rs1471909015 CA397258621 |
729 | W>* | No |
ClinGen gnomAD |
|
|
CA8311967 rs527376457 |
730 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1186461089 CA397258625 |
730 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs760311006 CA8311968 |
731 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs78986622 CA287145687 |
731 | D>G | No |
ClinGen TOPMed |
|
|
rs78986622 CA397258632 |
731 | D>V | No |
ClinGen TOPMed |
|
|
rs1157647266 CA397258638 |
732 | Y>C | No |
ClinGen gnomAD |
|
|
CA397258643 rs1342918262 |
733 | I>V | No |
ClinGen gnomAD |
|
|
CA397258661 rs1289057573 |
735 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs762259114 CA8311971 |
737 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201665984 CA8311973 |
739 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373174584 CA8311974 |
739 | R>H | No |
ClinGen ESP ExAC gnomAD |
|
|
rs542492436 CA8311977 CA397258699 |
742 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA397258705 rs1286958560 |
743 | E>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8311978 rs564268102 |
745 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs745451182 CA8311982 |
746 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA8311981 rs149773899 |
746 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs181490187 CA8311983 |
747 | H>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM707021 COSM707022 CA287145756 rs267604956 |
748 | P>L | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs1420315024 CA397258735 |
748 | P>S | No |
ClinGen gnomAD |
|
|
CA397258740 rs1432638859 |
749 | V>A | No |
ClinGen gnomAD |
|
|
COSM980747 COSM980749 CA8311986 rs372926521 |
749 | V>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs776900946 CA8311987 |
750 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1441453196 CA397258751 |
751 | E>G | No |
ClinGen gnomAD |
|
|
CA8311989 rs770489894 |
752 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA397258758 rs1371315097 |
752 | L>H | No |
ClinGen gnomAD |
|
|
rs763495657 CA8311991 |
753 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs773858039 CA8311990 |
753 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397258774 rs145678364 |
755 | I>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1048952213 CA287145824 |
755 | I>T | No |
ClinGen TOPMed |
|
|
rs145678364 CA8311992 |
755 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201293948 CA8311993 |
756 | H>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200252642 CA8311994 |
757 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs767753197 CA8311995 |
758 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397258812 rs1173483577 |
761 | I>L | No |
ClinGen gnomAD |
|
|
CA8311997 rs568574118 |
761 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs758285096 CA8312000 |
762 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs965868424 CA287145848 |
764 | D>N | No |
ClinGen TOPMed |
|
|
rs370990081 CA8312005 |
765 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746497873 CA8312003 |
765 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1168261865 CA397258846 |
766 | T>K | No |
ClinGen gnomAD |
|
|
CA8312006 rs747733732 |
767 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA397258847 rs747733732 |
767 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs144921882 CA8312007 |
769 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397259345 rs1306181145 |
770 | G>A | No |
ClinGen gnomAD |
|
|
CA397259359 rs1235670893 |
772 | A>T | No |
ClinGen gnomAD |
|
|
rs764270038 CA8312034 |
773 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA287146163 rs781767395 |
777 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs773041470 CA8312035 |
778 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA397259460 rs1488503228 |
781 | G>R | No |
ClinGen gnomAD |
|
|
CA8312038 rs766020569 |
782 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA8312039 rs138750784 |
782 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs767163752 CA8312041 |
783 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754822580 CA8312040 |
783 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs752219225 CA8312043 |
784 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752219225 CA8312042 |
784 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200515904 CA8312044 |
785 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA8312045 rs749739488 |
786 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA287146242 rs112972751 |
788 | A>G | No |
ClinGen Ensembl |
|
|
rs779094449 CA8312047 |
788 | A>S | No |
ClinGen ExAC TOPMed |
|
|
rs779094449 CA287146237 |
788 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
|
COSM1679407 rs112972751 CA287146243 COSM1679406 |
788 | A>V | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs376639390 CA397259520 |
789 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8312049 rs376639390 |
789 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397259529 rs1397083081 |
790 | L>V | No |
ClinGen TOPMed |
|
|
CA397259544 rs1567535161 |
791 | I>T | No |
ClinGen Ensembl |
|
|
CA397259536 rs1334691671 |
791 | I>V | No |
ClinGen gnomAD |
|
|
CA8312053 rs369879187 |
792 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA397259614 rs145415599 |
796 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8312054 rs145415599 |
796 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759554907 CA8312057 |
799 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767535793 CA8312058 |
801 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs760254273 CA8312061 |
802 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA8312059 rs752311082 |
802 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs374094142 CA8312062 |
803 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8312064 rs11545163 |
804 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
VAR_051706 CA8312063 rs11545163 |
804 | A>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1281352160 CA397259705 |
804 | A>V | No |
ClinGen TOPMed |
|
|
CA8312066 rs758953196 |
806 | Y>H | No |
ClinGen ExAC gnomAD |
|
| VAR_036503 | 807 | Q>E | a breast cancer sample; somatic mutation [UniProt] | No | UniProt |
|
CA8312067 COSM1563764 COSM1563763 rs780527965 |
807 | Q>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1272896307 CA397259745 |
808 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA8312068 rs372635779 |
808 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA397259770 rs781198740 |
810 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA287146401 rs781198740 |
810 | R>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781198740 CA8312070 |
810 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397259781 rs1597336883 |
811 | F>V | No |
ClinGen Ensembl |
|
|
rs1332859782 CA397259791 |
812 | A>T | No |
ClinGen gnomAD |
|
|
CA287146404 rs900617891 |
812 | A>V | No |
ClinGen Ensembl |
|
|
CA397259806 rs1456341600 |
813 | L>F | No |
ClinGen gnomAD |
|
|
CA397259809 rs1376965374 |
814 | S>R | No |
ClinGen gnomAD |
|
|
rs1439764091 CA397259824 |
815 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs774247595 CA8312073 RCV000714773 |
816 | R>Q | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs150535605 CA8312072 |
816 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1369357234 CA397259858 |
818 | H>R | No |
ClinGen TOPMed |
|
|
rs1436071940 CA397259855 |
818 | H>Y | No |
ClinGen gnomAD |
|
|
CA397259872 rs1567535337 |
819 | C>Y | No |
ClinGen Ensembl |
|
| rs909180329 | 820 | F>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397259888 rs909180329 |
820 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1240154636 CA397259895 |
821 | G>D | No |
ClinGen gnomAD |
|
|
VAR_051707 rs3764897 CA8312076 |
821 | G>R | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8312075 VAR_059774 rs3764897 |
821 | G>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1342065807 CA397260437 |
822 | V>L | No |
ClinGen TOPMed |
|
|
CA397260436 rs1342065807 |
822 | V>M | No |
ClinGen TOPMed |
|
|
rs765009791 CA8312098 |
825 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 826 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs188978323 CA8312102 |
829 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs188978323 CA8312101 |
829 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA8312100 rs761523318 |
829 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8312104 rs767893006 |
830 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs752886381 CA8312105 |
833 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397260550 rs1485107366 |
833 | D>Y | No |
ClinGen gnomAD |
|
|
COSM980759 CA397260570 COSM980761 rs756151080 |
835 | R>* | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA8312106 rs756151080 |
835 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs142690419 CA8312108 |
835 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs142690419 CA8312107 |
835 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs780039454 CA8312110 |
837 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1322667915 CA397260592 |
837 | P>S | No |
ClinGen gnomAD |
|
|
rs746779353 CA8312111 |
841 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1361648558 CA397260642 |
842 | F>L | No |
ClinGen gnomAD |
|
|
rs372253153 CA8312112 |
845 | L>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs776430641 CA8312114 |
846 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs1201181217 CA397260702 |
847 | Q>* | No |
ClinGen TOPMed |
|
|
rs769207467 CA8312116 |
849 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147544176 CA8312115 |
849 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8312119 rs765993254 |
851 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762633745 CA8312118 |
851 | E>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1221006 COSM1221007 CA8312121 rs759886983 |
854 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA8312122 rs767853543 |
855 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1239672535 CA397260797 |
855 | N>S | No |
ClinGen gnomAD |
|
|
rs753155727 CA8312123 |
856 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397260808 rs753155727 |
856 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1330455316 CA397260818 |
857 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA8312125 rs764114104 |
858 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs369256776 CA8312149 |
861 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs752514430 CA8312150 |
862 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199694422 CA8312151 |
862 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA397260888 rs1223288547 |
863 | C>G | No |
ClinGen gnomAD |
|
|
CA397260894 rs1247105391 |
863 | C>Y | No |
ClinGen gnomAD |
|
|
rs1323955831 CA397260899 |
864 | L>M | No |
ClinGen TOPMed |
|
|
CA8312153 rs749154436 |
866 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA8312154 rs374335117 |
867 | N>D | No |
ClinGen ESP ExAC gnomAD |
|
|
CA8312155 rs61170467 |
867 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1171558514 CA397260938 |
868 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs745540818 CA8312156 |
869 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs775771052 CA8312158 |
870 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8312159 COSM1384440 COSM1384439 rs201356383 |
870 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA8312160 rs769354818 |
871 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8312162 rs547370593 |
873 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8312161 rs200031534 |
873 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1292193080 CA397260996 |
874 | T>I | No |
ClinGen gnomAD |
|
|
rs765432833 CA8312163 |
875 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs145569527 CA8312167 |
876 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM241164 rs145569527 CA8312166 |
876 | R>Q | prostate [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs552209045 CA8312165 |
876 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201865933 CA287149492 |
878 | Y>N | No |
ClinGen 1000Genomes |
|
|
rs763815776 CA8312169 |
879 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8312171 rs369059895 |
880 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA287149505 rs369059895 |
880 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs764977005 CA8312172 |
881 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs911290748 CA287149547 |
882 | E>G | No |
ClinGen Ensembl |
|
|
CA8312173 rs144315377 |
883 | P>A | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1280358832 CA397261079 |
883 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
CA8312174 rs531506289 |
885 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed |
|
|
rs1003543127 CA287149550 |
885 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs201213709 CA8312175 |
886 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8312176 rs746576632 |
887 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1449509331 CA397261121 |
888 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1449509331 CA397261122 |
888 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1401933765 CA397261130 |
888 | S>R | No |
ClinGen TOPMed |
|
|
rs200384556 CA287149577 |
889 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8312180 rs748703019 |
889 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200384556 CA8312179 |
889 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200384556 CA8312178 |
889 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201183579 CA8312183 |
890 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8312182 rs201183579 |
890 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397261150 rs1253922660 |
891 | L>M | No |
ClinGen gnomAD |
|
|
CA8312185 rs774643645 |
891 | L>W | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 891 | L>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1597342356 CA397261161 |
892 | A>S | No |
ClinGen Ensembl |
|
|
CA397261171 rs1189792419 |
893 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA397261176 rs759703141 |
893 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759703141 CA8312186 |
893 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397261173 rs1189792419 |
893 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1191873548 CA397261187 |
894 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA397261195 rs1157052453 |
895 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA397261218 rs757236839 |
897 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8312189 rs757236839 |
897 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8312190 rs757236839 |
897 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs2302323 CA8312191 |
901 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA397261265 rs1173344631 |
902 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA397261300 rs1567538750 |
905 | H>P | No |
ClinGen Ensembl |
|
|
CA397261308 rs1177843309 |
906 | F>I | No |
ClinGen TOPMed |
|
|
CA8312192 CA8312193 rs140617636 |
906 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs754639275 CA8312195 |
907 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs534071621 CA8312196 |
908 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA397261327 rs534071621 |
908 | L>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1334638046 CA397261346 |
909 | K>N | No |
ClinGen gnomAD |
|
|
rs748508834 CA8312197 |
910 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA8312198 rs370441205 |
911 | L>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs773773335 CA8312199 |
913 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1567538824 CA397261385 |
913 | D>V | No |
ClinGen Ensembl |
|
|
rs1347114636 CA397261408 |
915 | S>P | No |
ClinGen gnomAD |
|
|
CA287149687 rs759898324 |
917 | L>P | No |
ClinGen Ensembl |
|
|
CA8312201 rs374916808 |
918 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs759797063 CA8312203 |
919 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA287149712 rs759797063 |
919 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397261451 rs1457343703 |
919 | P>T | No |
ClinGen gnomAD |
|
|
rs139550280 CA8312205 |
921 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs144190836 CA287149735 |
926 | M>L | No |
ClinGen ESP TOPMed |
|
|
CA397261556 rs144190836 |
926 | M>V | No |
ClinGen ESP TOPMed |
|
|
CA8312206 rs761592036 |
927 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA8312207 rs764878216 |
928 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs61759530 CA8312208 |
929 | L>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA397261613 rs1304063987 |
929 | L>V | No |
ClinGen TOPMed |
|
|
rs752760952 CA8312209 |
930 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA397261647 rs1332956267 |
931 | V>A | No |
ClinGen gnomAD |
|
|
CA8312211 rs756276907 |
932 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397261670 rs1298988820 |
932 | W>C | No |
ClinGen gnomAD |
|
|
CA397261658 rs1400664704 |
932 | W>R | No |
ClinGen gnomAD |
|
|
CA8312212 rs751008232 |
933 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751008232 CA397261683 |
933 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
No associated diseases with O14939
5 regional properties for O14939
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Phox homology | 64 - 195 | IPR001683 |
| domain | Phospholipase D/Transphosphatidylase | 437 - 464 | IPR001736-1 |
| domain | Phospholipase D/Transphosphatidylase | 751 - 778 | IPR001736-2 |
| domain | Pleckstrin homology domain | 203 - 313 | IPR001849 |
| domain | Phospholipase D-like domain | 627 - 795 | IPR025202 |
Functions
| Description | ||
|---|---|---|
| EC Number | 3.1.4.4 | Phosphoric diester hydrolases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| presynapse | The part of a synapse that is part of the presynaptic cell. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| N-acylphosphatidylethanolamine-specific phospholipase D activity | Catalysis of the release of N-acylethanolamine from N-acyl-phosphatidylethanolamine (NAPE) to generate N-acylethanolamine (NAE). |
| phosphatidylinositol binding | Binding to an inositol-containing glycerophospholipid, i.e. phosphatidylinositol (PtdIns) and its phosphorylated derivatives. |
| phospholipase D activity | Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate. |
8 GO annotations of biological process
| Name | Definition |
|---|---|
| cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures. |
| Fc-gamma receptor signaling pathway involved in phagocytosis | An Fc-gamma receptor signaling pathway that contributes to the endocytic engulfment of external particulate material by phagocytes. |
| inositol lipid-mediated signaling | The series of molecular signals in which a cell uses an inositol-containing lipid to convert a signal into a response. Inositol lipids include the phosphoinositides (phosphatidylinositol and its phosphorylated derivatives), ceramides containing inositol, and inositol glycolipids. |
| phosphatidic acid biosynthetic process | The chemical reactions and pathways resulting in the formation of phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids. |
| phospholipid catabolic process | The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester. |
| regulation of vesicle-mediated transport | Any process that modulates the rate, frequency, or extent of vesicle-mediated transport, the directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell. |
| small GTPase mediated signal transduction | The series of molecular signals in which a small monomeric GTPase relays a signal. |
| synaptic vesicle recycling | The trafficking of synaptic vesicles from the pre-synaptic membrane so the vesicle can dock and prime for another round of exocytosis and neurotransmitter release. Recycling occurs after synaptic vesicle exocytosis, and is necessary to replenish presynaptic vesicle pools, sustain transmitter release and preserve the structural integrity of the presynaptic membrane. Recycling can occur following transient fusion with the presynaptic membrane (kiss and run), or via endocytosis of presynaptic membrane. |
10 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q0V8L6 | PLD2 | Phospholipase D2 | Bos taurus (Bovine) | PR |
| Q13393 | PLD1 | Phospholipase D1 | Homo sapiens (Human) | PR |
| Q9Z280 | Pld1 | Phospholipase D1 | Mus musculus (Mouse) | PR |
| P97813 | Pld2 | Phospholipase D2 | Mus musculus (Mouse) | PR |
| P70496 | Pld1 | Phospholipase D1 | Rattus norvegicus (Rat) | PR |
| P70498 | Pld2 | Phospholipase D2 | Rattus norvegicus (Rat) | PR |
| P58766 | PLDALPHA3 | Phospholipase D alpha 3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M9W8 | PLPZETA2 | Phospholipase D zeta 2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LRZ5 | PLDZETA1 | Phospholipase D zeta 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C5Y0 | PLDDELTA | Phospholipase D delta | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MTATPESLFP | TGDELDSSQL | QMESDEVDTL | KEGEDPADRM | HPFLAIYELQ | SLKVHPLVFA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PGVPVTAQVV | GTERYTSGSK | VGTCTLYSVR | LTHGDFSWTT | KKKYRHFQEL | HRDLLRHKVL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| MSLLPLARFA | VAYSPARDAG | NREMPSLPRA | GPEGSTRHAA | SKQKYLENYL | NRLLTMSFYR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| NYHAMTEFLE | VSQLSFIPDL | GRKGLEGMIR | KRSGGHRVPG | LTCCGRDQVC | YRWSKRWLVV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| KDSFLLYMCL | ETGAISFVQL | FDPGFEVQVG | KRSTEARHGV | RIDTSHRSLI | LKCSSYRQAR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| WWAQEITELA | QGPGRDFLQL | HRHDSYAPPR | PGTLARWFVN | GAGYFAAVAD | AILRAQEEIF |
| 370 | 380 | 390 | 400 | 410 | 420 |
| ITDWWLSPEV | YLKRPAHSDD | WRLDIMLKRK | AEEGVRVSIL | LFKEVELALG | INSGYSKRAL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| MLLHPNIKVM | RHPDQVTLWA | HHEKLLVVDQ | VVAFLGGLDL | AYGRWDDLHY | RLTDLGDSSE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| SAASQPPTPR | PDSPATPDLS | HNQFFWLGKD | YSNLITKDWV | QLDRPFEDFI | DRETTPRMPW |
| 550 | 560 | 570 | 580 | 590 | 600 |
| RDVGVVVHGL | PARDLARHFI | QRWNFTKTTK | AKYKTPTYPY | LLPKSTSTAN | QLPFTLPGGQ |
| 610 | 620 | 630 | 640 | 650 | 660 |
| CTTVQVLRSV | DRWSAGTLEN | SILNAYLHTI | RESQHFLYIE | NQFFISCSDG | RTVLNKVGDE |
| 670 | 680 | 690 | 700 | 710 | 720 |
| IVDRILKAHK | QGWCYRVYVL | LPLLPGFEGD | ISTGGGNSIQ | AILHFTYRTL | CRGEYSILHR |
| 730 | 740 | 750 | 760 | 770 | 780 |
| LKAAMGTAWR | DYISICGLRT | HGELGGHPVS | ELIYIHSKVL | IADDRTVIIG | SANINDRSLL |
| 790 | 800 | 810 | 820 | 830 | 840 |
| GKRDSELAVL | IEDTETEPSL | MNGAEYQAGR | FALSLRKHCF | GVILGANTRP | DLDLRDPICD |
| 850 | 860 | 870 | 880 | 890 | 900 |
| DFFQLWQDMA | ESNANIYEQI | FRCLPSNATR | SLRTLREYVA | VEPLATVSPP | LARSELTQVQ |
| 910 | 920 | 930 | |||
| GHLVHFPLKF | LEDESLLPPL | GSKEGMIPLE | VWT |