Q9UHJ3
Gene name |
SFMBT1 (RU1) |
Protein name |
Scm-like with four MBT domains protein 1 |
Names |
hSFMBT, Renal ubiquitous protein 1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:51460 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9UHJ3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9UHJ3-F1 | Predicted | AlphaFoldDB |
535 variants for Q9UHJ3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| TCGA novel | 1 | M>? | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2451087 rs767455802 |
3 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1009918956 CA75026711 |
3 | G>R | No |
ClinGen gnomAD |
|
|
CA2451086 rs761729090 |
4 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA2451085 rs773920924 |
5 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1191517525 CA353381087 |
7 | L>F | No |
ClinGen gnomAD |
|
|
rs919970575 CA75026709 |
8 | D>V | No |
ClinGen TOPMed |
|
|
CA2451068 rs569986448 |
10 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs143066322 CA2451067 |
11 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1197840398 CA353380611 |
12 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA2451064 rs769340342 |
13 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs974825440 CA75025061 |
14 | G>C | No |
ClinGen Ensembl |
|
|
rs759249211 CA2451063 |
15 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA353380574 rs1231168217 |
17 | E>D | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 18 | V>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 19 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA353380538 rs1284670069 |
22 | W>* | No |
ClinGen gnomAD |
|
|
CA2451062 rs773778376 |
22 | W>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 23 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1441354408 CA353380534 |
23 | E>K | No |
ClinGen gnomAD |
|
|
CA353380527 rs1333530460 |
24 | D>Y | No |
ClinGen gnomAD |
|
|
rs200805193 CA2451059 |
25 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2451060 rs189181874 |
25 | Y>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs533827143 CA2451056 |
29 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs746062679 CA2451054 |
30 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1182998030 CA353380486 |
30 | G>R | No |
ClinGen gnomAD |
|
|
rs746062679 CA2451055 |
30 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781016738 CA2451053 |
31 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA2451052 rs757069018 |
32 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA2451051 rs751326933 |
33 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs763939966 CA2451050 |
36 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353380454 rs1211624316 |
36 | Y>H | No |
ClinGen gnomAD |
|
|
rs1223207516 CA353380445 |
37 | G>E | No |
ClinGen gnomAD |
|
|
rs1290300194 CA353380448 |
37 | G>R | No |
ClinGen gnomAD |
|
|
CA2451049 rs758294832 |
38 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs1379549740 CA353380419 |
41 | H>Y | No |
ClinGen TOPMed |
|
|
rs1475320406 CA353380088 |
42 | V>G | No |
ClinGen gnomAD |
|
|
rs752649142 CA2451031 |
43 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA2451030 rs147773729 |
45 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1300607075 CA353380072 |
45 | R>H | No |
ClinGen gnomAD |
|
|
rs766144781 CA2451027 |
51 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1430402685 CA353380027 |
52 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA353380025 rs1430402685 |
52 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs950898448 CA75023872 |
53 | G>R | No |
ClinGen TOPMed |
|
|
rs1300632131 CA353379980 |
59 | A>S | No |
ClinGen gnomAD |
|
|
CA75023871 rs940242324 |
59 | A>V | No |
ClinGen Ensembl |
|
| TCGA novel | 60 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA353379966 rs1420818886 |
61 | R>K | No |
ClinGen gnomAD |
|
|
CA75023870 rs758076601 |
62 | T>R | No |
ClinGen Ensembl |
|
|
CA353379957 rs1309792929 |
63 | D>Y | No |
ClinGen TOPMed |
|
|
rs112483165 CA75023869 |
66 | T>I | No |
ClinGen Ensembl |
|
|
rs1330510974 CA353379934 |
66 | T>S | No |
ClinGen TOPMed |
|
|
rs1575391160 CA353379914 |
68 | W>C | No |
ClinGen Ensembl |
|
|
rs142053347 CA2451023 |
72 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs142053347 CA2451024 |
72 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1559520377 CA353379887 |
73 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs987098356 CA75023868 |
74 | T>A | No |
ClinGen Ensembl |
|
|
rs1559520369 CA353379855 |
78 | Q>* | No |
ClinGen Ensembl |
|
|
rs770249107 CA2451021 |
78 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353379853 rs776089661 |
78 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776089661 CA2451022 |
78 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759615112 CA2451020 |
80 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs955355998 CA75023867 |
83 | R>C | No |
ClinGen Ensembl |
|
| TCGA novel | 83 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2451019 rs765640976 |
84 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs765640976 CA75023866 |
84 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
CA353379812 rs1265028551 |
85 | D>G | No |
ClinGen gnomAD |
|
|
CA2451018 rs771197546 |
87 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs747246589 CA353379792 |
88 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2451017 rs747246589 |
88 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353379771 rs1211548153 |
91 | R>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 91 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 94 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs79656631 CA2451015 |
101 | K>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs142806347 CA75023865 |
102 | A>T | No |
ClinGen ESP TOPMed |
|
|
rs1575391062 CA353379676 |
104 | L>R | No |
ClinGen Ensembl |
|
| TCGA novel | 106 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2451013 rs779024035 |
106 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA353379658 rs1474870335 |
107 | I>T | No |
ClinGen TOPMed |
|
|
rs1341145887 CA353379621 |
112 | Q>R | No |
ClinGen gnomAD |
|
|
CA353379609 rs1401218446 |
113 | N>K | No |
ClinGen gnomAD |
|
|
CA75023864 rs41275525 |
116 | T>P | No |
ClinGen Ensembl |
|
|
rs1164268797 CA353379583 |
117 | L>P | No |
ClinGen TOPMed |
|
|
CA2451009 rs755766084 |
118 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353379581 rs553226022 |
118 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2451010 rs553226022 |
118 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs750072811 CA2451008 |
119 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA353379567 rs1408410599 |
120 | P>R | No |
ClinGen gnomAD |
|
| TCGA novel | 121 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763410426 CA353379564 |
121 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs763410426 CA2451006 |
121 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1162276769 CA353379533 |
123 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1162276769 CA353379532 |
123 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1432187673 CA353379526 |
124 | R>G | No |
ClinGen TOPMed |
|
|
CA2450990 rs780905490 |
124 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs753115859 CA2450988 |
125 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs367969218 CA2450989 |
125 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450987 rs765577648 |
127 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA353379488 rs1299155779 |
129 | D>E | No |
ClinGen TOPMed |
|
|
CA75022966 rs943134230 |
130 | W>G | No |
ClinGen Ensembl |
|
|
CA353379475 rs1306397519 |
131 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA2450985 rs201654314 |
131 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450986 rs760071399 |
131 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA353379470 rs1444598800 |
132 | E>A | No |
ClinGen gnomAD |
|
|
CA353379467 rs375911318 |
132 | E>D | No |
ClinGen ESP gnomAD |
|
|
CA2450983 rs748760209 |
135 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1440421494 CA353379451 |
135 | R>W | No |
ClinGen gnomAD |
|
|
rs371188276 CA75022964 |
136 | Q>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs767839291 CA353379434 |
138 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1450219979 CA353379426 |
139 | I>K | No |
ClinGen TOPMed |
|
|
CA2450979 rs774328121 |
139 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768549724 CA2450978 |
139 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353379425 rs1423361341 |
140 | G>R | No |
ClinGen TOPMed |
|
|
CA2450977 rs559416772 |
142 | C>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2450976 rs545932380 |
143 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA353379387 rs1265707777 |
146 | V>I | No |
ClinGen gnomAD |
|
|
CA2450975 rs200381952 |
147 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200849255 CA75022962 |
147 | P>S | No |
ClinGen gnomAD |
|
|
CA353379367 rs1559516906 |
150 | E>K | No |
ClinGen Ensembl |
|
| rs1310064771 | 151 | G>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1234206615 CA353379266 |
153 | R>C | No |
ClinGen gnomAD |
|
|
rs545326234 CA2450961 |
153 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2450960 rs146679648 |
154 | N>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs769825139 CA2450958 |
156 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA2450957 rs745786192 |
161 | L>H | No |
ClinGen ExAC gnomAD |
|
|
rs1575382863 CA353379123 |
164 | P>L | No |
ClinGen Ensembl |
|
|
CA2450956 rs753169382 |
165 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA2450955 rs770402566 |
167 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1172853285 CA353379093 |
168 | L>V | No |
ClinGen gnomAD |
|
|
CA2450954 rs144880451 |
170 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2450952 rs757976784 |
173 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450951 rs749665135 |
175 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1479097241 CA353379007 |
175 | D>V | No |
ClinGen gnomAD |
|
|
rs780279554 CA2450950 |
176 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs780279554 CA75022733 |
176 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA353378991 rs1440817357 |
178 | S>N | No |
ClinGen gnomAD |
|
|
CA353378981 rs1280810093 |
179 | T>I | No |
ClinGen gnomAD |
|
|
rs756686803 CA2450949 |
183 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs151197006 CA2450948 |
185 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2450947 rs200651934 |
186 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA353378934 rs1292643409 |
187 | N>D | No |
ClinGen gnomAD |
|
|
CA2450946 rs562704386 |
188 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA353378926 rs1425077201 |
188 | I>V | No |
ClinGen TOPMed |
|
|
rs764427895 CA2450944 |
193 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA2450945 rs764427895 |
193 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA2450943 rs146102086 |
195 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA75022732 rs558266493 |
195 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1166775274 CA353378849 |
200 | E>G | No |
ClinGen gnomAD |
|
|
CA75022731 rs904611545 |
202 | S>F | No |
ClinGen Ensembl |
|
|
CA353378830 rs1424757537 |
203 | D>G | No |
ClinGen gnomAD |
|
|
rs759563295 CA2450940 |
203 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353378812 rs142835908 |
205 | Y>* | No |
ClinGen ESP ExAC gnomAD |
|
|
rs776455170 CA2450939 |
205 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353378805 rs1239290261 |
206 | E>D | No |
ClinGen gnomAD |
|
|
CA353378808 rs1379862277 |
206 | E>V | No |
ClinGen gnomAD |
|
|
rs760181342 CA2450937 |
207 | H>D | No |
ClinGen ExAC gnomAD |
|
|
rs772649976 CA2450936 |
207 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs771780235 CA2450935 |
210 | Y>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 213 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 215 | F>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs573414873 CA2450933 |
217 | H>R | No |
ClinGen 1000Genomes ExAC |
|
|
rs1010106142 CA75022730 |
219 | V>L | No |
ClinGen TOPMed |
|
|
rs895710935 CA75022729 |
223 | A>V | No |
ClinGen gnomAD |
|
|
rs374178747 CA2450929 |
225 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2450928 rs751749764 |
227 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA2450927 rs777992887 |
228 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs200164982 CA75022728 |
232 | P>T | No |
ClinGen Ensembl |
|
|
rs746233508 CA2450912 |
234 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746233508 CA75022632 |
234 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1401564294 CA353378619 |
234 | A>T | No |
ClinGen gnomAD |
|
|
CA2450911 rs138462433 |
235 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA353378596 rs1161404959 |
236 | R>G | No |
ClinGen TOPMed |
|
|
CA2450910 rs771628668 |
237 | H>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 239 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2450909 rs747484489 |
240 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778046879 CA2450908 |
240 | N>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 240 | N>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA353378552 rs1189286433 |
242 | A>D | No |
ClinGen gnomAD |
|
|
rs1189286433 CA353378551 |
242 | A>G | No |
ClinGen gnomAD |
|
|
rs1478911332 CA353378529 |
245 | Q>P | No |
ClinGen gnomAD |
|
|
CA2450906 rs752780414 |
248 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450905 rs779006602 |
249 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450904 rs373288404 |
249 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA353378491 rs1559515211 |
251 | V>M | No |
ClinGen Ensembl |
|
|
rs1311282083 CA353378484 |
252 | K>E | No |
ClinGen gnomAD |
|
|
CA353378470 rs753632764 |
253 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs961593192 CA75022631 |
256 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA353378438 rs1389189429 |
258 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA2450879 rs35652837 |
267 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2450878 rs188260557 |
270 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2450875 rs751100746 |
274 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA353378301 rs1183041108 |
275 | F>L | No |
ClinGen gnomAD |
|
|
CA353378295 rs1447126283 |
276 | S>F | No |
ClinGen TOPMed |
|
|
CA353378277 rs1380345534 |
279 | M>T | No |
ClinGen TOPMed |
|
| TCGA novel | 280 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2450873 rs369463608 |
284 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1456756889 CA353378234 |
285 | D>A | No |
ClinGen gnomAD |
|
|
rs1260385472 CA353378231 |
285 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1321578981 CA353378207 |
289 | P>A | No |
ClinGen gnomAD |
|
|
rs1310686647 CA353378203 |
289 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 289 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1256284484 CA353378176 |
293 | S>F | No |
ClinGen TOPMed |
|
|
CA75022578 rs761123540 |
294 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs761123540 CA2450870 |
294 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA2450848 rs768980314 |
302 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353378085 rs139594702 |
304 | K>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1014626054 CA75022347 |
310 | M>T | No |
ClinGen TOPMed |
|
|
CA2450845 rs770071383 |
314 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450846 rs770071383 |
314 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450844 rs150560425 |
314 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2450843 rs150560425 RCV000956105 |
314 | R>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA2450841 CA353377996 rs372272113 |
317 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA353377983 rs1473884174 |
319 | A>G | No |
ClinGen gnomAD |
|
|
CA353377986 rs141910637 |
319 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs141910637 CA2450839 |
319 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs375175444 CA2450836 |
320 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2450835 rs375175444 |
320 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778562011 CA2450837 |
320 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1405491518 CA353377979 |
321 | R>* | No |
ClinGen gnomAD |
|
|
CA2450833 rs762244151 |
321 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764646162 CA2450831 |
324 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1575379460 CA353377949 |
326 | H>N | No |
ClinGen Ensembl |
|
|
CA2450829 rs201801140 |
327 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs562352832 CA2450827 |
328 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353377935 rs562352832 |
328 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1263050893 CA353377928 |
329 | S>G | No |
ClinGen gnomAD |
|
|
CA2450826 rs776938872 |
330 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 331 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1489342733 CA353377913 |
331 | G>D | No |
ClinGen gnomAD |
|
|
rs770989703 CA2450825 |
332 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA353377892 rs1343021142 |
334 | P>R | No |
ClinGen TOPMed |
|
|
rs1575379389 CA353377877 |
336 | Q>H | No |
ClinGen Ensembl |
|
| TCGA novel | 336 | Q>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1223852317 CA353377863 |
338 | S>T | No |
ClinGen gnomAD |
|
|
CA353377857 rs1270487103 |
339 | L>Q | No |
ClinGen TOPMed |
|
|
CA75022344 rs973954493 |
341 | N>I | No |
ClinGen TOPMed gnomAD |
|
|
CA353377842 rs973954493 |
341 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA353377830 rs1203052493 |
343 | L>P | No |
ClinGen gnomAD |
|
|
rs748067060 CA2450821 |
348 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1326572626 CA353377797 |
348 | P>L | No |
ClinGen gnomAD |
|
|
CA353377798 rs748067060 |
348 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1393940153 CA353377789 |
349 | P>L | No |
ClinGen gnomAD |
|
|
rs1445568836 CA353377767 |
351 | Y>S | No |
ClinGen TOPMed gnomAD |
|
|
rs375778606 CA2450803 |
352 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA2450802 rs774436293 |
353 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1412146966 CA353377748 |
354 | Q>E | No |
ClinGen gnomAD |
|
|
rs756031171 CA2450800 |
356 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450799 rs144071796 |
357 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1439246980 CA353377658 |
366 | G>S | No |
ClinGen gnomAD |
|
|
CA2450797 rs745489576 |
368 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA353377629 rs1206292932 |
370 | A>V | No |
ClinGen gnomAD |
|
|
CA2450796 rs780779248 |
371 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353377617 rs1326257687 |
372 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA353377605 rs1207966576 |
374 | C>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| rs754014702 | 377 | P>= | Variant assessed as Somatic; 4.652e-05 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs535877148 CA2450792 |
377 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs535877148 CA2450793 |
377 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs572144123 CA75021680 |
380 | S>A | No |
ClinGen Ensembl |
|
|
rs1161631373 CA353377552 |
380 | S>F | No |
ClinGen gnomAD |
|
|
rs762124629 CA2450768 |
382 | H>N | No |
ClinGen ExAC gnomAD |
|
|
CA2450767 rs751442498 |
383 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1170536631 CA353377487 |
389 | K>E | No |
ClinGen gnomAD |
|
|
CA908179780 rs1324202112 |
389 | K>N | No |
ClinGen TOPMed |
|
|
rs762763268 CA2450765 |
392 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 394 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2450762 rs759057208 |
396 | I>V | No |
ClinGen ExAC |
|
|
rs1243337923 CA353377414 |
400 | E>Q | No |
ClinGen gnomAD |
|
|
rs1010825512 CA75021679 |
401 | V>M | No |
ClinGen Ensembl |
|
|
CA353377398 rs1216070499 |
402 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs374727301 CA75021678 |
404 | A>G | No |
ClinGen ESP TOPMed |
|
|
CA2450760 rs770635390 |
404 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs779382428 CA2450758 |
405 | T>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 405 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA353377363 rs1338611495 |
408 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1338611495 CA353377361 |
408 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1358755842 CA353377334 |
413 | Y>H | No |
ClinGen gnomAD |
|
|
CA353377332 rs1575374797 |
413 | Y>S | No |
ClinGen Ensembl |
|
|
CA75021676 rs371573708 |
417 | Q>E | No |
ClinGen ESP TOPMed |
|
|
rs756631344 CA2450754 |
417 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA353377300 rs1212640476 |
418 | L>V | No |
ClinGen gnomAD |
|
|
CA353377292 rs1575374769 |
419 | E>G | No |
ClinGen Ensembl |
|
|
rs760128413 CA2450730 |
423 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772770889 CA2450729 |
425 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 426 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766887391 CA74840315 |
428 | C>R | No |
ClinGen Ensembl |
|
|
CA2450728 rs771697556 |
428 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA2450727 rs749674159 |
430 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450726 rs200694315 |
434 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs1253640564 CA353230500 |
435 | M>V | No |
ClinGen gnomAD |
|
|
CA2450725 rs770465491 |
437 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA353230419 rs1559510946 |
438 | F>Y | No |
ClinGen Ensembl |
|
|
rs1321262516 CA353230401 |
439 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA353230235 rs1289596111 |
446 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA353230206 rs1156587088 |
447 | G>D | No |
ClinGen TOPMed |
|
|
rs1383736172 CA353230220 |
447 | G>S | No |
ClinGen gnomAD |
|
|
CA353230164 rs1386921172 |
449 | P>R | No |
ClinGen TOPMed |
|
|
rs377104271 CA74840275 |
449 | P>S | No |
ClinGen Ensembl |
|
|
rs1389501198 CA353230156 |
450 | L>I | No |
ClinGen gnomAD |
|
|
CA353230112 rs1330540210 |
452 | T>P | No |
ClinGen TOPMed |
|
|
CA74840270 rs1031741535 |
453 | P>A | No |
ClinGen TOPMed |
|
|
rs1298738082 CA353230095 |
453 | P>R | No |
ClinGen gnomAD |
|
|
RCV000949697 CA2450721 rs75244018 |
454 | R>C | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs182385312 CA2450720 |
454 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA353230083 rs1575373923 |
455 | R>* | No |
ClinGen Ensembl |
|
|
rs1164873334 CA353230079 |
455 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1164873334 CA353230081 |
455 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA353230062 rs1379265737 |
457 | R>G | No |
ClinGen gnomAD |
|
|
CA2450718 rs752497833 |
457 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353229853 rs1433145652 |
459 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1160224426 CA353229861 |
459 | Y>H | No |
ClinGen gnomAD |
|
|
CA353229841 rs1267427937 |
460 | K>E | No |
ClinGen gnomAD |
|
|
rs777277773 CA2450701 |
460 | K>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1192678115 CA353229805 |
462 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA2450699 rs771501963 |
464 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA74838575 rs1018815646 |
471 | K>Q | No |
ClinGen Ensembl |
|
|
CA353229081 rs1386382119 |
473 | V>A | No |
ClinGen TOPMed |
|
|
CA353229085 rs1559509189 |
473 | V>I | No |
ClinGen Ensembl |
|
|
rs777992965 CA2450680 |
474 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769924814 CA2450679 |
476 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs964954532 CA74836926 |
479 | V>I | No |
ClinGen TOPMed |
|
|
rs151052292 CA353228996 |
480 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs149793544 CA2450675 |
481 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2450676 rs748138282 |
481 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1454359361 CA353228964 |
482 | G>C | No |
ClinGen TOPMed |
|
|
CA2450674 rs781234500 |
482 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372117971 CA2450672 |
486 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750394076 CA2450670 |
488 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1183925977 CA353228862 |
490 | S>P | No |
ClinGen gnomAD |
|
|
CA2450668 rs756793367 |
491 | T>R | No |
ClinGen ExAC gnomAD |
|
|
CA74836827 rs956081445 |
493 | S>T | No |
ClinGen Ensembl |
|
|
CA2450646 rs752423354 CA2450647 |
495 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777390457 CA2450649 |
495 | M>R | No |
ClinGen ExAC gnomAD |
|
|
rs777390457 CA2450648 |
495 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1350498920 CA353228722 |
496 | I>T | No |
ClinGen gnomAD |
|
| TCGA novel | 504 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 504 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs764757789 CA2450645 |
506 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1303039895 CA353228633 |
508 | N>S | No |
ClinGen gnomAD |
|
|
CA2450644 rs756506535 |
509 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1054876837 CA74834814 |
510 | R>C | No |
ClinGen gnomAD |
|
|
CA2450643 rs750697192 |
510 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1405537657 CA353228546 |
521 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1405537657 CA353228545 |
521 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
CA2450642 rs367911999 |
522 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA2450640 rs774463246 |
525 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
CA353228512 rs1197165560 |
526 | P>L | No |
ClinGen gnomAD |
|
|
CA353228500 rs1431148341 |
528 | C>Y | No |
ClinGen gnomAD |
|
|
CA353228495 rs1363155221 |
529 | V>I | No |
ClinGen TOPMed |
|
|
CA353228466 rs1559508243 |
533 | N>I | No |
ClinGen Ensembl |
|
|
rs1481372741 CA353228398 |
542 | L>V | No |
ClinGen gnomAD |
|
|
CA353228373 rs1185404050 |
546 | I>V | No |
ClinGen gnomAD |
|
|
CA74834040 rs1049280711 |
547 | N>S | No |
ClinGen gnomAD |
|
|
CA74834039 rs929112242 |
549 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA353228335 rs1575367121 |
551 | K>N | No |
ClinGen Ensembl |
|
|
rs1471585181 CA353228326 |
553 | S>G | No |
ClinGen TOPMed |
|
|
rs763030910 CA2450620 |
554 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA74834006 rs865906393 |
556 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs765557845 CA2450618 |
557 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450619 rs775415477 |
557 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA2450617 rs759649800 |
558 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 558 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA74833995 rs778175189 |
563 | K>N | No |
ClinGen Ensembl |
|
|
CA353228249 rs1302119904 |
565 | S>A | No |
ClinGen gnomAD |
|
|
CA353228244 rs897311411 |
566 | V>L | No |
ClinGen TOPMed |
|
|
rs897311411 CA74833990 |
566 | V>M | No |
ClinGen TOPMed |
|
|
CA2450616 rs570715537 |
567 | W>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs377570378 CA2450614 |
569 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA353228216 rs1431665999 |
570 | C>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 571 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2450613 rs773287869 |
571 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs772079939 CA2450612 |
573 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1454400620 CA353227896 |
580 | G>R | No |
ClinGen gnomAD |
|
|
rs760560804 CA353227886 |
581 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs760560804 CA2450594 |
581 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA2450592 rs140740471 |
584 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs183218584 CA2450593 |
584 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 585 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA353227853 rs1484465288 |
586 | T>I | No |
ClinGen TOPMed |
|
|
rs774295082 CA2450590 |
587 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs761633706 CA2450591 |
587 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA74832852 rs111615944 |
588 | E>G | No |
ClinGen Ensembl |
|
|
CA2450589 rs145677464 |
588 | E>Q | No |
ClinGen ESP ExAC TOPMed |
|
|
CA2450588 rs748764647 |
590 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA353227799 rs1295175089 |
595 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA353227795 rs940640665 |
596 | V>L | No |
ClinGen TOPMed |
|
|
rs940640665 CA74832840 |
596 | V>M | No |
ClinGen TOPMed |
|
|
rs1374662892 CA353227745 |
603 | T>A | No |
ClinGen TOPMed |
|
|
CA353227717 rs1312134001 |
607 | L>M | No |
ClinGen gnomAD |
|
|
CA2450585 rs747436260 |
608 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs778076365 CA2450584 |
609 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs1206001338 CA353227662 |
615 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA353227655 rs1358761221 |
616 | P>S | No |
ClinGen gnomAD |
|
|
rs544641382 CA2450580 |
617 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2450581 rs79007826 |
617 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2450579 rs141544187 |
619 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs766768225 CA2450578 |
620 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA2450577 rs760975557 |
622 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353227621 rs760975557 |
622 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750284898 CA2450576 |
623 | C>Y | No |
ClinGen ExAC |
|
|
rs953163157 CA74832725 |
626 | N>K | No |
ClinGen Ensembl |
|
| TCGA novel | 626 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2450574 rs761629031 |
627 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA2450573 rs774158740 |
627 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA353227576 rs1424896492 |
628 | S>C | No |
ClinGen gnomAD |
|
|
rs774974364 CA2450570 |
635 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs751353418 CA2450552 |
640 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA353227471 rs1321304590 |
641 | K>N | No |
ClinGen gnomAD |
|
|
rs764001505 CA2450551 |
641 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs762912756 CA2450550 |
642 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1233374786 CA353227441 |
645 | K>R | No |
ClinGen gnomAD |
|
|
CA2450549 rs775025818 |
647 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs759010457 CA2450547 |
651 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1367871006 CA353227398 |
651 | P>S | No |
ClinGen gnomAD |
|
|
CA2450545 rs372237613 |
653 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs748520518 CA2450544 |
654 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA353227345 rs1575363273 |
655 | S>N | No |
ClinGen Ensembl |
|
|
rs774774896 CA74830506 |
658 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774774896 CA2450543 |
658 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769084473 CA2450542 |
664 | A>T | No |
ClinGen ExAC |
|
|
rs749790570 CA2450540 |
665 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368026256 CA2450539 |
667 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2450537 rs745883343 |
668 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353227167 rs1459778923 |
669 | K>* | No |
ClinGen gnomAD |
|
|
CA353227169 rs1459778923 |
669 | K>E | No |
ClinGen gnomAD |
|
|
rs1227846487 CA353227157 |
670 | R>G | No |
ClinGen TOPMed |
|
|
CA2450536 rs781621064 |
671 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1215390024 CA353227141 |
671 | R>W | No |
ClinGen gnomAD |
|
|
CA2450535 rs757493403 |
672 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1249104211 CA353227064 |
676 | V>A | No |
ClinGen gnomAD |
|
|
rs763922711 CA2450533 |
677 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450530 rs765096836 |
677 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758075898 CA2450532 |
677 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs963068945 CA74830380 |
681 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs575405720 CA2450527 |
681 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2450528 rs575405720 |
681 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1397115209 CA353226983 |
682 | S>P | No |
ClinGen gnomAD |
|
|
CA2450526 rs760345758 |
683 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA2450525 rs774628083 |
685 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749597201 CA2450523 |
690 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1442552434 CA353226860 |
691 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA353226850 rs970354727 |
692 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs970354727 CA74830353 |
692 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs770410067 CA2450521 |
693 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA353226836 rs1394165736 |
694 | P>S | No |
ClinGen gnomAD |
|
|
CA353226827 rs1430688348 |
695 | Q>E | No |
ClinGen TOPMed |
|
|
CA2450503 rs770461099 |
696 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA353226744 rs1278306303 |
697 | S>N | No |
ClinGen gnomAD |
|
|
CA353226717 rs1230773772 |
699 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA353226718 rs1230773772 |
699 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA2450502 rs552063469 |
700 | E>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2450501 rs776952012 |
702 | E>Q | No |
ClinGen ExAC |
|
|
CA353226652 rs1282705496 |
703 | D>E | No |
ClinGen gnomAD |
|
|
rs771070158 CA2450500 |
705 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA2450499 rs746997664 |
706 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs778072999 CA353226596 |
707 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA2450498 rs778072999 |
707 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA74830067 rs201619999 |
717 | S>R | No |
ClinGen TOPMed |
|
|
rs778648595 CA2450495 |
718 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA74830066 rs367653718 |
720 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2450493 rs367653718 |
720 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA74830062 rs374172539 |
722 | Q>* | No |
ClinGen ESP |
|
|
rs1478699637 CA353226367 |
726 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs755661376 CA2450491 |
730 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450490 rs749885859 |
731 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA2450488 rs761523684 |
735 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA2450486 rs765717079 |
737 | C>* | No |
ClinGen ExAC gnomAD |
|
|
rs1263021998 CA353226239 |
737 | C>R | No |
ClinGen gnomAD |
|
|
CA2450487 rs563122290 |
737 | C>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1275668964 CA353226182 |
742 | T>S | No |
ClinGen gnomAD |
|
|
rs1324525909 CA353226167 |
743 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
CA74830039 rs371159611 |
746 | I>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1186277447 CA353226107 |
747 | S>F | No |
ClinGen gnomAD |
|
|
CA74830038 rs957535255 |
747 | S>P | No |
ClinGen Ensembl |
|
|
CA2450484 rs777202517 |
749 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA353226086 rs1415693207 |
751 | P>S | No |
ClinGen gnomAD |
|
|
CA2450480 rs773165013 |
752 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA353226077 rs1185634686 |
753 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs143300940 CA2450479 |
754 | R>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1190947505 CA353226011 |
758 | K>E | No |
ClinGen gnomAD |
|
|
CA353226007 rs1465591126 |
758 | K>R | No |
ClinGen gnomAD |
|
|
rs748348277 CA2450478 |
759 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450476 rs549341438 |
762 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA2450475 rs748976524 |
762 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450473 rs756001447 |
763 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA2450472 rs745423147 |
765 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450470 rs147669594 |
769 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763769452 CA2450468 |
770 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353225852 rs1450115968 |
770 | E>K | No |
ClinGen gnomAD |
|
|
rs755386771 CA2450467 |
771 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA2450466 rs186459505 |
773 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs186459505 CA353225807 |
773 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2450464 rs374308555 |
774 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA353225774 rs773391002 |
776 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773391002 CA2450463 |
776 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767606905 CA2450462 |
777 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA353225761 rs1180682662 |
777 | K>R | No |
ClinGen gnomAD |
|
|
rs1490239550 CA353225249 |
778 | E>K | No |
ClinGen gnomAD |
|
|
CA2450440 rs202194528 |
779 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs763062967 CA2450439 |
782 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1448074961 CA353225120 |
786 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs775729575 CA2450438 |
790 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA353225047 rs1217655934 |
793 | P>A | No |
ClinGen TOPMed |
|
|
rs759305868 CA2450436 |
797 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA2450434 rs770982459 |
801 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760494712 CA2450432 |
803 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA74829273 rs867253711 |
803 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 804 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1159098136 CA353224952 |
806 | R>T | No |
ClinGen gnomAD |
|
|
CA2450430 rs780629488 |
815 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 816 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1433963152 CA353224818 |
824 | G>R | No |
ClinGen gnomAD |
|
|
CA2450414 rs773235951 |
825 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs1466049892 CA353224800 |
826 | A>V | No |
ClinGen gnomAD |
|
|
CA2450413 rs771514867 |
829 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA353224781 rs1321105035 |
830 | L>I | No |
ClinGen gnomAD |
|
|
rs1575361307 CA353224771 |
831 | T>N | No |
ClinGen Ensembl |
|
|
rs528270317 CA2450411 |
833 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201883615 CA2450410 |
834 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA74828667 rs903280541 |
835 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA353224749 rs1239507094 |
836 | Q>K | No |
ClinGen TOPMed |
|
|
rs1473367111 CA353224733 |
838 | C>R | No |
ClinGen TOPMed |
|
|
CA353224725 rs1186430603 |
839 | M>L | No |
ClinGen TOPMed |
|
|
rs757567961 CA2450408 CA2450407 |
840 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2450406 rs752087891 |
841 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA2450405 rs778273267 |
845 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs200975156 CA2450404 |
847 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA353224672 rs200975156 |
847 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200975156 CA2450403 |
847 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs146543428 CA2450402 |
848 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA353224611 rs1166884614 |
855 | R>M | No |
ClinGen gnomAD |
|
|
CA353224598 rs1575361229 |
857 | K>R | No |
ClinGen Ensembl |
|
|
CA353224552 rs1390551708 |
863 | Q>R | No |
ClinGen gnomAD |
|
|
rs369500798 CA2450399 |
865 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139862995 CA2450397 |
866 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139862995 CA2450398 |
866 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
No associated diseases with Q9UHJ3
9 regional properties for Q9UHJ3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Sterile alpha motif domain | 793 - 859 | IPR001660 |
| repeat | Mbt repeat | 20 - 123 | IPR004092-1 |
| repeat | Mbt repeat | 128 - 235 | IPR004092-2 |
| repeat | Mbt repeat | 242 - 351 | IPR004092-3 |
| repeat | Mbt repeat | 356 - 455 | IPR004092-4 |
| domain | SLED domain | 502 - 616 | IPR021987 |
| domain | Scm-like with four MBT domains protein 1/2, SAM domain | 782 - 866 | IPR037604 |
| repeat | Scm-like with four MBT domains protein 1, third MBT repeat | 273 - 366 | IPR047351 |
| repeat | Scm-like with four MBT domains protein 1, second MBT repeat | 159 - 257 | IPR047352 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| chromatin binding | Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
| histone binding | Binding to a histone, any of a group of water-soluble proteins found in association with the DNA of eukaryotic or archaeal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in gene regulation and DNA replication. They may be chemically modified (methylated, acetlyated and others) to regulate gene transcription. |
| transcription corepressor activity | A transcription coregulator activity that represses or decreases the transcription of specific gene sets via binding to a DNA-bound DNA-binding transcription factor, either on its own or as part of a complex. Corepressors often act by altering chromatin structure and modifications. For example, one class of transcription corepressors modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators. |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| cell differentiation | The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state. |
| chromatin organization | The assembly or remodeling of chromatin composed of DNA complexed with histones, other associated proteins, and sometimes RNA. |
| negative regulation of DNA-templated transcription | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
| negative regulation of muscle organ development | Any process that stops, prevents, or reduces the frequency, rate or extent of muscle development. |
| spermatogenesis | The developmental process by which male germ line stem cells self renew or give rise to successive cell types resulting in the development of a spermatozoa. |
11 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q969R5 | L3MBTL2 | Lethal(3)malignant brain tumor-like protein 2 | Homo sapiens (Human) | PR |
| Q9UQR0 | SCML2 | Sex comb on midleg-like protein 2 | Homo sapiens (Human) | PR |
| Q96GD3 | SCMH1 | Polycomb protein SCMH1 | Homo sapiens (Human) | PR |
| Q9Y468 | L3MBTL1 | Lethal(3)malignant brain tumor-like protein 1 | Homo sapiens (Human) | PR |
| Q96JM7 | L3MBTL3 | Lethal(3)malignant brain tumor-like protein 3 | Homo sapiens (Human) | PR |
| Q8BLB7 | L3mbtl3 | Lethal(3)malignant brain tumor-like protein 3 | Mus musculus (Mouse) | PR |
| A2A5N8 | L3mbtl1 | Lethal(3)malignant brain tumor-like protein 1 | Mus musculus (Mouse) | PR |
| Q9JMD1 | Sfmbt1 | Scm-like with four MBT domains protein 1 | Mus musculus (Mouse) | PR |
| Q9JMD2 | Sfmbt1 | Scm-like with four MBT domains protein 1 | Rattus norvegicus (Rat) | PR |
| B2D6M2 | lin-61 | Protein lin-61 | Caenorhabditis elegans | PR |
| Q11193 | sor-3 | Sop-2-related protein 3 | Caenorhabditis elegans | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MNGEQQLDAD | AGSGMEEVEL | SWEDYLEETG | STAVPYGSFK | HVDTRLQNGF | APGMKLEVAV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RTDPETYWVA | TVITTCEQLL | LLRYDGYGED | RRADFWCDIR | KADLYPIGWC | EQNKKTLEAP |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EGIRDKVSDW | DEFLRQTLIG | ACSPPVPLLE | GLRNGRNPLD | LIAPGSRLEC | QAFQDSLSTW |
| 190 | 200 | 210 | 220 | 230 | 240 |
| IVTVVENIGG | RLKLRYEGLE | SSDNYEHWLY | YLDPFLHHVG | WAAQQGYELQ | PPSAIRHLKN |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EAEWQEILAK | VKEEEEEPLP | SYLFKDKQVI | GIHTFSVNMK | LEAVDPWSPF | GISPATVVKV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| FDEKYFLVEM | DDLRPENHAR | RSFVCHADSP | GIFPVQWSLK | NGLHISPPPG | YPSQDFDWAD |
| 370 | 380 | 390 | 400 | 410 | 420 |
| YLKQCGAEAA | PQRCFPPLIS | EHEFKENMKL | EAVNPILPEE | VCVATITAVR | GSYLWLQLEG |
| 430 | 440 | 450 | 460 | 470 | 480 |
| SKKPIPECIV | SVESMDIFPL | GWCETNGHPL | STPRRARVYK | QRKIAVVQPE | KQVPSSRTVH |
| 490 | 500 | 510 | 520 | 530 | 540 |
| EGLRNQELNS | TESVMINGKY | CCPKIYFNHR | CFSGPYLNKG | RIAELPQCVG | PGNCVLVLRE |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VLTLLINAAY | KPSRVLRELQ | LDKDSVWHGC | GEVLKAKYKG | KSYRATVEIV | KTADRVTEFC |
| 610 | 620 | 630 | 640 | 650 | 660 |
| RQTCIKLECC | PNLFGPRMVL | DKCSENCSVL | TKTKYTHYYG | KKKNKRIGRP | PGGHSNLACA |
| 670 | 680 | 690 | 700 | 710 | 720 |
| LKKASKRRKR | RKNVFVHKKK | RSSASVDNTP | AGSPQGSGGE | DEDDPDEGDD | DSLSEGSTSE |
| 730 | 740 | 750 | 760 | 770 | 780 |
| QQDELQEESE | MSEKKSCSSS | PTQSEISTSL | PPDRQRRKRE | LRTFSFSDDE | NKPPSPKEIR |
| 790 | 800 | 810 | 820 | 830 | 840 |
| IEVAERLHLD | SNPLKWSVAD | VVRFIRSTDC | APLARIFLDQ | EIDGQALLLL | TLPTVQECMD |
| 850 | 860 | ||||
| LKLGPAIKLC | HHIERIKFAF | YEQFAN |