Q9SIP7
Gene name |
RPS3A (At2g31610, T9H9.13) |
Protein name |
40S ribosomal protein S3-1 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT2G31610 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9SIP7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9SIP7-F1 | Predicted | AlphaFoldDB |
5 variants for Q9SIP7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH01934728 | 5 | I>S | No | 1000Genomes | |
| ENSVATH05639279 | 215 | D>E | No | 1000Genomes | |
| ENSVATH05639280 | 226 | A>T | No | 1000Genomes | |
| tmp_2_13451605_C_T | 230 | T>I | No | 1000Genomes | |
| tmp_2_13451652_A_G | 246 | I>V | No | 1000Genomes |
No associated diseases with Q9SIP7
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
| cytosolic ribosome | A ribosome located in the cytosol. |
| cytosolic small ribosomal subunit | The small subunit of a ribosome located in the cytosol. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| peroxisome | A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism. |
| plant-type vacuole | A closed structure that is completely surrounded by a unit membrane, contains liquid, and retains the same shape regardless of cell cycle phase. An example of this structure is found in Arabidopsis thaliana. |
| plasmodesma | A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| translation | The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P05750 | RPS3 | 40S ribosomal protein S3 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q06559 | RpS3 | 40S ribosomal protein S3 | Drosophila melanogaster (Fruit fly) | PR |
| P23396 | RPS3 | 40S ribosomal protein S3 | Homo sapiens (Human) | PR |
| P62908 | Rps3 | 40S ribosomal protein S3 | Mus musculus (Mouse) | PR |
| P48152 | rps-3 | 40S ribosomal protein S3 | Caenorhabditis elegans | PR |
| Q9FJA6 | RPS3C | 40S ribosomal protein S3-3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M339 | RPS3B | 40S ribosomal protein S3-2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MATQISKKRK | FVADGVFYAE | LNEVLTRELA | EDGYSGVEVR | VTPMRTEIII | RATRTQNVLG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EKGRRIRELT | SLVQKRFKFP | VDSVELYAEK | VNNRGLCAIA | QAESLRYKLL | GGLAVRRACY |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GVLRFVMESG | AKGCEVIVSG | KLRAARAKSM | KFKDGYMVSS | GQPTKEYIDA | AVRHVLLRQG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VLGIKVKIML | DWDPTGKSGP | KTPLPDVVII | HAPKDDVVYS | APAQAAAPVT | LVQEAPLTTV |
| DYPEMIPPVA |