Q9C820
Gene name |
RABG3D (RAB72, At1g52280, F19K6.10) |
Protein name |
Ras-related protein RABG3d |
Names |
AtRABG3d, Ras-related protein Rab72, AtRab72 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G52280 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9C820
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9C820-F1 | Predicted | AlphaFoldDB |
7 variants for Q9C820
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_1_19468748_C_A | 103 | R>M | No | 1000Genomes | |
| ENSVATH13528214 | 122 | V>L | No | 1000Genomes | |
| tmp_1_19468438_C_T | 147 | A>T | No | 1000Genomes | |
| tmp_1_19468206_C_T | 189 | D>N | No | 1000Genomes | |
| ENSVATH04942828 | 193 | V>I | No | 1000Genomes | |
| ENSVATH13528208 | 197 | Q>R | No | 1000Genomes | |
| ENSVATH14297178 | 202 | T>I | No | 1000Genomes |
No associated diseases with Q9C820
1 regional properties for Q9C820
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Small GTP-binding protein domain | 10 - 172 | IPR005225 |
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| plant-type vacuole | A closed structure that is completely surrounded by a unit membrane, contains liquid, and retains the same shape regardless of cell cycle phase. An example of this structure is found in Arabidopsis thaliana. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| vacuolar membrane | The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| GTP binding | Binding to GTP, guanosine triphosphate. |
| GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + H+ + phosphate. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
8 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P18067 | RAB7A | Ras-related protein Rab-7a | Canis lupus familiaris (Dog) (Canis familiaris) | PR |
| P51149 | RAB7A | Ras-related protein Rab-7a | Homo sapiens (Human) | PR |
| Q9NP90 | RAB9B | Ras-related protein Rab-9B | Homo sapiens (Human) | PR |
| P51150 | Rab7a | Ras-related protein Rab-7a | Mus musculus (Mouse) | PR |
| Q9R0M6 | Rab9a | Ras-related protein Rab-9A | Mus musculus (Mouse) | PR |
| P09527 | Rab7a | Ras-related protein Rab-7a | Rattus norvegicus (Rat) | PR |
| Q99P75 | Rab9a | Ras-related protein Rab-9A | Rattus norvegicus (Rat) | PR |
| Q9LW76 | RABG3C | Ras-related protein RABG3c | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSSRRRVLLK | VIILGDSGVG | KTSLMNQFVN | RKFSNQYKAT | IGADFLTKEV | QIDDRIFTLQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IWDTAGQERF | QSLGVAFYRG | ADCCVLVYDV | NVMKSFDNLN | NWREEFLIQA | SPSDPENFPF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VVLGNKTDVD | GGKSRVVSEK | KAKAWCASKG | NIPYFETSAK | EGFNVDAAFE | CITKNAFKNE |
| 190 | 200 | ||||
| PEEEPYLPDT | IDVAGGQQQR | STGCEC |