Q8CEE7
Gene name |
Rdh13 |
Protein name |
Retinol dehydrogenase 13 |
Names |
|
Species |
Mus musculus (Mouse) |
KEGG Pathway |
mmu:108841 |
EC number |
1.1.1.300: With NAD(+) or NADP(+) as acceptor |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8CEE7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8CEE7-F1 | Predicted | AlphaFoldDB |
27 variants for Q8CEE7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| rs3397196165 | 38 | G>E | No | EVA | |
| rs3388874903 | 46 | A>T | No | EVA | |
| rs3388879444 | 48 | T>I | No | EVA | |
| rs3388867346 | 58 | L>R | No | EVA | |
| rs3388855054 | 70 | R>G | No | EVA | |
| rs3388871119 | 70 | R>Q | No | EVA | |
| rs3388872647 | 71 | D>G | No | EVA | |
| rs3388876873 | 72 | M>R | No | EVA | |
| rs47860906 | 77 | V>A | No | EVA | |
| rs3388874936 | 92 | R>C | No | EVA | |
| rs3388876814 | 92 | R>H | No | EVA | |
| rs221887335 | 95 | R>H | No | EVA | |
| rs3412028328 | 109 | R>G | No | EVA | |
| rs50534020 | 111 | V>I | No | EVA | |
| rs244704193 | 112 | I>F | No | EVA | |
| rs3388854996 | 148 | L>M | No | EVA | |
| rs3396807198 | 183 | D>E | No | EVA | |
| rs49818861 | 185 | E>D | No | EVA | |
| rs3397349391 | 185 | E>I | No | EVA | |
| rs3397349391 | 185 | E>K | No | EVA | |
| rs3388874892 | 186 | D>G | No | EVA | |
| rs3388863457 | 211 | T>A | No | EVA | |
| rs3388876877 | 227 | A>V | No | EVA | |
| rs3397751699 | 247 | A>S | No | EVA | |
| rs6240813 | 282 | N>S | No | EVA | |
| rs3388859058 | 311 | T>M | No | EVA | |
| rs3388859023 | 318 | G>D | No | EVA |
No associated diseases with Q8CEE7
1 regional properties for Q8CEE7
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | Short-chain dehydrogenase/reductase, conserved site | 187 - 215 | IPR020904 |
Functions
| Description | ||
|---|---|---|
| EC Number | 1.1.1.300 | With NAD(+) or NADP(+) as acceptor |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| mitochondrial inner membrane | The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae. |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| NADP-retinol dehydrogenase activity | Catalysis of the reaction: all-trans-retinol + NADP+ = all-trans-retinal + NADPH + H+. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| eye photoreceptor cell development | Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve. |
| response to high light intensity | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus. |
| retina layer formation | The process in which the vertebrate retina is organized into three laminae: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia. |
| retinal metabolic process | The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A. |
12 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9VLU5 | Wwox | WW domain-containing oxidoreductase | Drosophila melanogaster (Fruit fly) | PR |
| P16152 | CBR1 | Carbonyl reductase [NADPH] 1 | Homo sapiens (Human) | PR |
| O75828 | CBR3 | Carbonyl reductase [NADPH] 3 | Homo sapiens (Human) | PR |
| A6NN90 | C2orf81 | Uncharacterized protein C2orf81 | Homo sapiens (Human) | PR |
| Q9HBH5 | RDH14 | Retinol dehydrogenase 14 | Homo sapiens (Human) | PR |
| Q9NZC7 | WWOX | WW domain-containing oxidoreductase | Homo sapiens (Human) | PR |
| Q91WL8 | Wwox | WW domain-containing oxidoreductase | Mus musculus (Mouse) | PR |
| Q9ERI6 | Rdh14 | Retinol dehydrogenase 14 | Mus musculus (Mouse) | PR |
| Q9DAQ4 | Uncharacterized protein C2orf81 homolog | Mus musculus (Mouse) | PR | |
| Q6AXP4 | Uncharacterized protein C2orf81 homolog | Rattus norvegicus (Rat) | PR | |
| A2RVM0 | TIC32 | Short-chain dehydrogenase TIC 32, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q803A8 | wwox | WW domain-containing oxidoreductase | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSRFLLPVSV | VGTVIGGTVL | LKDYVAGGAC | PSKATIPGKT | VIVTGANTGI | GKQTALELAK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RGGNVILACR | DMEKCEVAAK | DIRGETLNPR | VRAERLDLAS | LKSIREFARK | VIKEEERVDI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LVNNAAVMRC | PHWTTEDGFE | MQFGVNYLGH | FLLTNLLLDK | LKASAPSRII | NLSSLAHVAG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| HIDFEDLNWQ | MKKYDTKAAY | CQSKLAVVLF | TKELSHRLQG | SGVTVNALHP | GVARTELGRH |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TGMHNSAFSG | FMLGPFFWLL | FKSPQLAAQP | STYLAVAEEL | ENVSGKYFDG | LREKAPSPEA |
| 310 | 320 | 330 | |||
| EDEEVARRLW | TESARLVGLA | MAHGSPGRGH | AIPR |