Q53LY0
Gene name |
CLPC3 (Os11g0267400, LOC_Os11g16590) |
Protein name |
Chaperone protein ClpC3, chloroplastic |
Names |
ATP-dependent Clp protease ATP-binding subunit ClpC homolog 3, Casein lytic proteinase C3 |
Species |
Oryza sativa subsp japonica (Rice) |
KEGG Pathway |
osa:4350258 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q53LY0
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q53LY0-F1 | Predicted | AlphaFoldDB |
No variants for Q53LY0
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q53LY0 | |||||
No associated diseases with Q53LY0
10 regional properties for Q53LY0
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | UVR domain | 518 - 553 | IPR001943 |
| domain | AAA+ ATPase domain | 301 - 441 | IPR003593-1 |
| domain | AAA+ ATPase domain | 645 - 825 | IPR003593-2 |
| domain | ATPase, AAA-type, core | 306 - 422 | IPR003959-1 |
| domain | ATPase, AAA-type, core | 644 - 817 | IPR003959-2 |
| domain | Clp, repeat (R) domain | 99 - 240 | IPR004176 |
| conserved_site | ClpA/B, conserved site 1 | 396 - 408 | IPR018368 |
| domain | Clp ATPase, C-terminal | 824 - 914 | IPR019489 |
| conserved_site | ClpA/B, conserved site 2 | 679 - 697 | IPR028299 |
| domain | ClpA/ClpB, AAA lid domain | 444 - 543 | IPR041546 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
10 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q60649 | Clpb | Caseinolytic peptidase B protein homolog | Mus musculus (Mouse) | PR |
| Q9WTT2 | Clpb | Caseinolytic peptidase B protein homolog | Rattus norvegicus (Rat) | PR |
| Q2QVG9 | CLPC2 | Chaperone protein ClpC2, chloroplastic | Oryza sativa subsp japonica (Rice) | PR |
| Q7F9I1 | CLPC1 | Chaperone protein ClpC1, chloroplastic | Oryza sativa subsp japonica (Rice) | PR |
| Q7XL03 | CLPD2 | Chaperone protein ClpD2, chloroplastic | Oryza sativa subsp japonica (Rice) | PR |
| P42730 | CLPB1 | Chaperone protein ClpB1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FI56 | CLPC1 | Chaperone protein ClpC1, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SXJ7 | CLPC2 | Chaperone protein ClpC2, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| P31541 | CD4A | ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic | Solanum lycopersicum (Tomato) (Lycopersicon esculentum) | PR |
| P31542 | CD4B | ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic | Solanum lycopersicum (Tomato) (Lycopersicon esculentum) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MERTLLNPPP | SLRSPACRTT | TATRIRPSSS | MATMIPTPPP | MRHARLVKAS | AAGRRELHAP |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PIAPPILLGL | RSPAAASYGR | ASGGGGRRRG | ARVVARMGFD | MFTDKAIKAI | MMAQEEARRL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GHHAAGSEQL | LLGVIGEGTG | IGAKVLRGAG | LSLKAARAEV | EKMAGRGPGM | VPMEIKFTPA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AKNVLQASQE | EAHQLGHNYV | GSEHLLLGLL | REHGAALVVL | KNFQADPSNI | RSEVIRMISD |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TSEDHQPVSA | AVGGGSSTTK | IPTLLEYGTN | LTKLAEEGKL | DPVVGRQNQV | DRVVQILGRR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| TKNNPCLIGE | PGVGKTAIAE | GLAQRIAAGN | VPETIDGKTV | ITLDMGLLVA | GTKYRGEFEE |
| 370 | 380 | 390 | 400 | 410 | 420 |
| RLKKLMDEVK | QNGEIILFLD | EVHTLVGAGA | AEGAIDAANI | LKPALARGEL | QCIGATTIDE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YRKHIEKDPA | LERRFQPVKV | PEPTVDETIG | ILKGLRERYE | IHHKVQYTDE | SLIAAARLSY |
| 490 | 500 | 510 | 520 | 530 | 540 |
| QYISDRFLPD | KAIDLVDEAG | SLVRLRNAQL | PDEAKELEKK | LKKIMAEKSE | AIRSQDFEKA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GALRGEEVEL | KSEIMSLVDK | SKEMSKAAVD | SGESPGPTVT | EADVQHIVSS | WTGVPVEKVT |
| 610 | 620 | 630 | 640 | 650 | 660 |
| VDESSRLLAM | ESSLHRRIVG | QDEAVTAISR | AIRRARVGLR | DPRRPIASFI | FAGPTGVGKS |
| 670 | 680 | 690 | 700 | 710 | 720 |
| ELAKALAAYY | YGSPEAMVRL | DMSEFMEKHT | VAKLVGSPPG | YVGYAEGGQL | TEAIRRRPYA |
| 730 | 740 | 750 | 760 | 770 | 780 |
| VVLFDEVEKA | HPDVFNMMLQ | ILDDGRLTDS | KGRTVDFKNS | LIIMTSNVGS | GVIEKGGRQL |
| 790 | 800 | 810 | 820 | 830 | 840 |
| GFAGDGSGDG | GYGVIKNMVE | EEMKRYFRPE | FLNRLDEMIV | FRQLTKLEVK | EIAGIMLAEV |
| 850 | 860 | 870 | 880 | 890 | 900 |
| TGRIGGKGIG | LQVTERFKEL | VVEQGFDPSY | GARPLRRAIM | RLLEDTLTDK | MLAGEICAGD |
| 910 | 920 | 930 | |||
| SVIVDADGDG | NVVVVGRRSA | GLPDLKSPAF | TV |