Q7XL03
Gene name |
CLPD2 (Os04g0405000, LOC_Os04g33210, OJ000315_02.14) |
Protein name |
Chaperone protein ClpD2, chloroplastic |
Names |
ATP-dependent Clp protease ATP-binding subunit ClpD homolog 2, Casein lytic proteinase D2 |
Species |
Oryza sativa subsp japonica (Rice) |
KEGG Pathway |
osa:4335747 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q7XL03
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q7XL03-F1 | Predicted | AlphaFoldDB |
No variants for Q7XL03
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q7XL03 | |||||
No associated diseases with Q7XL03
9 regional properties for Q7XL03
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | AAA+ ATPase domain | 296 - 445 | IPR003593-1 |
| domain | AAA+ ATPase domain | 650 - 831 | IPR003593-2 |
| domain | ATPase, AAA-type, core | 301 - 417 | IPR003959-1 |
| domain | ATPase, AAA-type, core | 649 - 824 | IPR003959-2 |
| domain | Clp, repeat (R) domain | 71 - 217 | IPR004176 |
| conserved_site | ClpA/B, conserved site 1 | 396 - 408 | IPR018368 |
| domain | Clp ATPase, C-terminal | 830 - 920 | IPR019489 |
| conserved_site | ClpA/B, conserved site 2 | 684 - 702 | IPR028299 |
| domain | ClpA/ClpB, AAA lid domain | 444 - 545 | IPR041546 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
3 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q2QVG9 | CLPC2 | Chaperone protein ClpC2, chloroplastic | Oryza sativa subsp japonica (Rice) | PR |
| Q53LY0 | CLPC3 | Chaperone protein ClpC3, chloroplastic | Oryza sativa subsp japonica (Rice) | PR |
| Q7F9I1 | CLPC1 | Chaperone protein ClpC1, chloroplastic | Oryza sativa subsp japonica (Rice) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEACCCSSSS | VPSASILATG | AGLRRRFSPA | GAGGGGRAVA | VAAGRPIRAS | AALLAAPAPR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RRGGVVVRAV | FERFTERAVK | AVVFSQREAR | GMGDETVAPH | HLLLGLVAED | RSPLGFLASG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VRVERAREAC | RAAVGKEGLA | QAPVGLATDV | PFSGASKRVF | EAAVEFSRNM | GCNFISPEHI |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ALGLFNLNDP | TTNNVLKSLG | VDSSQLAKQA | LTRVQGELAK | DGREPVGLSS | FKVREKFTPG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GGKSAIVKYS | NKNKEKSALA | LFCLDLTMRA | SGGLIDPVIG | RKDEIERVVQ | IICRRTKNNP |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ILLGEAGVGK | TAIAEGLAHK | IANGDVPIFL | VGKRILSLDV | ALLMAGAKER | GELEARVTSL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| IREVRKAGDV | ILFIDEVHTL | IGSGIAGRGS | KGAGLDIANL | LKPALARGEL | QCIASTTLDE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| HRLHFDKDKA | LARRFQPVLV | NEPSQEDAVK | ILLGLREKYE | TYHKCKYTLE | SINAAVYLSA |
| 490 | 500 | 510 | 520 | 530 | 540 |
| RYIADRHLPD | KAIDLIDEAG | SRARMESFKR | KKEEQCSILS | KSPDEYWQEI | RAVQNMHEVA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| LTNKVKYSLN | QNDQEDAVDI | ELVGEDKTSP | ASMLSTSTDK | PSLVGSEEIA | RVTSLWSGIP |
| 610 | 620 | 630 | 640 | 650 | 660 |
| VQQLTADERK | LLVGLDDELR | KRVIGQDDAV | LAISKAVKRS | RVGLNDPDRP | IATLIFCGPT |
| 670 | 680 | 690 | 700 | 710 | 720 |
| GVGKTELTKA | LAASYFGSES | ATVRLDMSEY | MERHAVSKLI | GSPPGYMGFG | EGGTLTEAVR |
| 730 | 740 | 750 | 760 | 770 | 780 |
| RKPFTVVLLD | EIEKAHPDIF | NILLQIFEDG | HLTDSQGRRV | SFKNTLIVMT | SNVGSTSISN |
| 790 | 800 | 810 | 820 | 830 | 840 |
| GKRSIGFQTQ | TDTEEKSYAA | MKSLVMEELK | AFFRPELLNR | IDEVVVFHPL | EKTQMLAILN |
| 850 | 860 | 870 | 880 | 890 | 900 |
| IMLQEVKGRI | LALGIGLEVS | DSMKDLISQH | GYDKSYGARP | LRRAVTQLVE | DVISEAILSG |
| 910 | 920 | 930 | |||
| QFKPGDTIMV | DTDATGKPCL | SRLNDQTVQL | SDPTPTL |